BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038373
(475 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444971|ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Vitis vinifera]
Length = 476
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 315/484 (65%), Positives = 374/484 (77%), Gaps = 17/484 (3%)
Query: 1 MASLVSIQQHAANSMIISSNFNSKISHSISAHSVTLKSSSP----VKLLCAYATPNPKVY 56
MASL+S+ + NS II+SNF ++I SA + SSSP +KLLC YA PN +
Sbjct: 1 MASLMSLNR-TGNS-IITSNFKARIPAHSSALPLKPISSSPQKPPLKLLCTYALPNHQPT 58
Query: 57 RNTRFVKKQRN----PSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVR 112
R ++Q N P + + TGT N N P N + V+L+ LC+EGK+R
Sbjct: 59 NKPRVFRRQTNSTHPPKQHNGQNLTGT-QLNNANYPQTENFTVVHSGVDLMGLCEEGKIR 117
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
EA+EYMGQ A Y VF ++L SCG KS+E+G+RVH+LL S F DVELNNKLIEM
Sbjct: 118 EAVEYMGQGVCAE--YGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIEM 175
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
YG+C + R AR+VFD++R+RN+SSWHLMI+GYAANGQG DGL+LFE+MRK G P ETF
Sbjct: 176 YGRCGSMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFERMRKVGLRPVGETF 235
Query: 233 LVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+ V +AC S V+EG +YFE+MK + GI+PGIEHY+ +I VLG GH+ EAEEFV++MP
Sbjct: 236 VAVLSACGS---VEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFGHINEAEEFVDKMP 292
Query: 293 FEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
EPT EVWEALRNFA+IHG +ELEDRAEE+L LDPSKAI DKIP PP+KKQ A NMLE
Sbjct: 293 IEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIPTPPQKKQLAVNMLEG 352
Query: 353 KNRVSDYRSTDLYRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERL 411
KNRVS+YRST+ Y+G+ YEK+KGLNGQMREAGYVPDTRYVLHDID+EAKE+AL YHSERL
Sbjct: 353 KNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERL 412
Query: 412 AIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
AIAYGLISTP R PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF+DGKCSC
Sbjct: 413 AIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC 472
Query: 472 GDYW 475
GDYW
Sbjct: 473 GDYW 476
>gi|147835805|emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
Length = 497
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/484 (64%), Positives = 374/484 (77%), Gaps = 17/484 (3%)
Query: 1 MASLVSIQQHAANSMIISSNFNSKISHSISAHSVTLKSSSP----VKLLCAYATPNPKVY 56
MAS +S+ + NS II+SNF ++I SA + SSSP +KLLC YA PN +
Sbjct: 1 MASXMSLNR-TGNS-IITSNFKARIPAHSSALPLKPISSSPQNPPLKLLCTYALPNHQPT 58
Query: 57 RNTRFVKKQRN----PSSNEQEPKTGTG-HSQNTNDPLRGNAQLESLDVNLLSLCKEGKV 111
R ++Q N P + + TGT ++QN N P N + V+L+ LC+EGK+
Sbjct: 59 NKPRVFRRQTNSTHPPKQHNGQNLTGTQLNTQNANYPQTENFTVVHSGVDLMGLCEEGKI 118
Query: 112 REAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIE 171
REA+EYMGQ A Y VF ++L SCG KS+E+G+RVH+LL S F DVELNNKLIE
Sbjct: 119 REAVEYMGQGVCAE--YGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIE 176
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MYG+C + R AR+VFD++R+RN+SSWHLMI+GYAANGQG DGL+LFE+MRK G P ET
Sbjct: 177 MYGRCGSMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFERMRKVGLRPVGET 236
Query: 232 FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
F+ V +AC S E EG +YFE+MK + GI+PGIEHY+ +I VLG GH+ EAEEFV++M
Sbjct: 237 FVAVLSACGSVE---EGLMYFELMKKECGIIPGIEHYLGVIDVLGKFGHINEAEEFVDKM 293
Query: 292 PFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
P EPT EVWEALRNFA+IHG +ELEDRAEE+L LDPSKAI DKIP PP+KKQ A NMLE
Sbjct: 294 PIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIPTPPQKKQLAVNMLE 353
Query: 352 EKNRVSDYRSTDLYRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSER 410
KNRVS+YRST+ Y+G+ YEK+KGLNGQMREAGYVPDTRYVLHDID+EAKE+AL YHSER
Sbjct: 354 GKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSER 413
Query: 411 LAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCS 470
LAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF+DGKCS
Sbjct: 414 LAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 473
Query: 471 CGDY 474
CGDY
Sbjct: 474 CGDY 477
>gi|356497955|ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 452
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/454 (62%), Positives = 340/454 (74%), Gaps = 27/454 (5%)
Query: 33 SVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGH----------S 82
+V SSS + CAYA PN RN N S + P G+
Sbjct: 15 AVFTHSSSSIPF-CAYAVPNASRRRNG-----TNNSRSTHKIPPLCKGNLPNEQKLQLDH 68
Query: 83 QNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLK 142
QN N PL L+V+L+SLC+EG + + +E MGQ A A Y V+ +LL+ C + +
Sbjct: 69 QNQNAPL-------PLNVDLVSLCEEGNLDQVLELMGQ--GAVADYRVYLALLNLCEHTR 119
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
S+E GKRVHE LR S F +DVEL+N+LI MY KC + + AR+VFDQ+ +RN+SSWHLMI
Sbjct: 120 SLESGKRVHEFLRRSTFRRDVELSNRLIGMYCKCGSVKDARRVFDQIPERNISSWHLMIG 179
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
GYAANG G DGL++F+QM++ G PD ETF +V AACA AEAV+EGFL+FE MK ++GIV
Sbjct: 180 GYAANGLGCDGLLVFQQMKQAGVPPDGETFELVLAACAQAEAVEEGFLHFESMK-EHGIV 238
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL 322
P +EHY+ +I +LG+ G L EAEEF+E++P E VE WE+LRNFAQ HGD++LED AEE+
Sbjct: 239 PSMEHYLEVINILGNTGQLNEAEEFIEKIPIELGVEAWESLRNFAQKHGDLDLEDHAEEV 298
Query: 323 LGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE-YEKMKGLNGQMRE 381
L LDPSKA+ DK+P PPRKKQS NMLEEKNRV++YR + Y+ E +EK+ GL+GQMRE
Sbjct: 299 LTCLDPSKAVADKLPPPPRKKQSDMNMLEEKNRVTEYRYSIPYKEEAHEKLGGLSGQMRE 358
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGYVPDTRYVLHDIDEE KEKALQYHSERLAIAYGLISTPPR LRIIKNLRICGDCHNA
Sbjct: 359 AGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNA 418
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IKIMSKIVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 419 IKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 452
>gi|449446817|ref|XP_004141167.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/474 (58%), Positives = 341/474 (71%), Gaps = 23/474 (4%)
Query: 6 SIQQHAANSMIISSNFNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQ 65
SI HA + ++NF S+I + H LKS L + N+RF K
Sbjct: 4 SIPSHATVNSTATTNFKSRI---LPFHFPVLKSFRSTLL-------STNALSNSRFRKSA 53
Query: 66 RNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESL--DVNLLSLCKEGKVREAIEYMGQDAS 123
+ Q SQN R + + SL V+LL+LC+EGKV + +EY+GQ
Sbjct: 54 HQ--YDAQSTTNTLSKSQN-----RTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQ--G 104
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLAR 183
A Y VF++LL+SC NLK +E G+RV LL+ + F D+ELNN+LIEMY C + AR
Sbjct: 105 AKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDAR 164
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
KVFD++ ++ SSW+LMI GY NG+G +GL LFEQM+ G P+ ETFLVV AACA AE
Sbjct: 165 KVFDKMANKDTSSWNLMIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAE 224
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
AVKEG YF+IM N+YGI P IEHY+ ++ VLG +GHLIEAEEF+E+MP PT ++W+AL
Sbjct: 225 AVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDAL 284
Query: 304 RNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP-LPPRKKQSATNMLEEKNRVSDYRST 362
RN+A++HG++ELEDRAEEL+ LDPS P LPPR+KQS+TNMLEEK+RV ++R
Sbjct: 285 RNYARLHGNMELEDRAEELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCA 344
Query: 363 DLYRGEYE-KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTP 421
Y+ E E ++KGLNGQMREAGYVPDTRYVLHDIDEEAK++ALQYHSERLAIAYGLISTP
Sbjct: 345 MPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTP 404
Query: 422 PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
R LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 405 ARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
>gi|449488164|ref|XP_004157956.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/477 (58%), Positives = 347/477 (72%), Gaps = 29/477 (6%)
Query: 6 SIQQHAANSMIISSNFNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQ 65
SI HA + ++NF S+I + H LKS L + N+RF K
Sbjct: 4 SIPSHATVNSTATTNFKSRI---LPFHFPVLKSFRSTLL-------STNALSNSRFRK-- 51
Query: 66 RNPSSNEQEPKTGTG---HSQNTNDPLRGNAQLESL--DVNLLSLCKEGKVREAIEYMGQ 120
S+++ + ++ T SQN R + + SL V+LL+LC+EGKV +A+EY+GQ
Sbjct: 52 ---SAHQYDAQSTTNTLYKSQN-----RTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQ 103
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
A Y VF++LL+SC NLK +E G+RV LL+ + F D+ELNN+LIEMY C +
Sbjct: 104 --GAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMK 161
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
ARKVFD++ ++ SSW+LMI G NG+G +GL LFEQM+ G P+ ETFLVV AACA
Sbjct: 162 DARKVFDKMANKDTSSWNLMIKGCGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACA 221
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
AEAVKEG YF+IM N+YGI P IEHY+ ++ VLG +GHLIEAEEF+E+MP PT ++W
Sbjct: 222 MAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIW 281
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP-LPPRKKQSATNMLEEKNRVSDY 359
+ALRN+A++HG++ELEDRAEEL+ LDPS P LPPR+KQS+TNMLEEK+RV ++
Sbjct: 282 DALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREF 341
Query: 360 RSTDLYRGEYE-KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLI 418
R Y+ E E ++KGLNGQMREAGYVPDTRYVLHDIDEEAK++ALQYHSERLAIAYGLI
Sbjct: 342 RCAMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLI 401
Query: 419 STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
STP R LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 402 STPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
>gi|358248494|ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/453 (59%), Positives = 334/453 (73%), Gaps = 29/453 (6%)
Query: 34 VTLKSSSPVKLLCAYATPNPKVYRNTRF----------VKKQRNPSSNEQEPKTGTGHSQ 83
+SS C Y P+ RN ++K+++P NEQ+ K Q
Sbjct: 15 AVFTNSSSFVPFCTYTVPDASRRRNGNTGSRSTHKITPLRKEKHP--NEQKLKLD---HQ 69
Query: 84 NTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKS 143
N N L+V+L++LC+EG + + +E MGQ A A Y V+ +LL+ C + +S
Sbjct: 70 NQN----------PLNVDLVALCEEGNLDQVLELMGQ--GAVADYRVYLALLNLCEHTRS 117
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+E GKRVHE+LR SAF DVEL+N+LI MY KC + + AR+VFDQ+ RN+++WHLMI G
Sbjct: 118 LESGKRVHEILRRSAFRGDVELSNRLIGMYCKCGSVKNARRVFDQMLDRNMATWHLMIGG 177
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
Y +NG G DGL++F+QM++ PD ETF +V AAC+ AEAV+EGFL+FE MK +YGIVP
Sbjct: 178 YTSNGLGCDGLLVFQQMKQAELPPDGETFELVLAACSQAEAVEEGFLHFESMK-EYGIVP 236
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+EHY+ +I ++G+AG L EAEEF+E +P E VE WE+LR FA+IHGD++LED AEELL
Sbjct: 237 SMEHYLEVINIMGNAGQLKEAEEFIENVPIELGVEAWESLRKFARIHGDLDLEDCAEELL 296
Query: 324 GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE-YEKMKGLNGQMREA 382
DPSKAI DK+P PPRKKQS NMLEEKNR ++YR + Y+ E EK+ GL+GQMREA
Sbjct: 297 TRFDPSKAIADKLPTPPRKKQSDVNMLEEKNRATEYRYSIPYKEEDNEKLGGLSGQMREA 356
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GYVPDTRYVLHDIDEE KEKALQYHSERLAIAYGLISTPPR LRIIKNLRICGDCHNAI
Sbjct: 357 GYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAI 416
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KIMSKIVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 417 KIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 449
>gi|147834943|emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
Length = 627
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/445 (57%), Positives = 325/445 (73%), Gaps = 13/445 (2%)
Query: 40 SPVKLLCAYATPNPKVYRNTRFVKK-QRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESL 98
SP + + P+P +N + + RN SN+ + G N+ AQ+
Sbjct: 187 SPNQWNPQHQNPSPLNNQNENYPQPGSRNLPSNQNQSYPHQGSPSQWNNQNTNQAQIVEN 246
Query: 99 DV--------NLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRV 150
V +L++LC+EGKV+EA+E M + A A F +L +SCG+ K +E K+V
Sbjct: 247 QVSHAPPSVADLMNLCQEGKVKEAVELMEKGVRADA--QCFYALFNSCGSPKLLEEAKKV 304
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H+ S F D++LNNK++EMYG C + AR+VFD + R++ SWHLMI+GYA N G
Sbjct: 305 HDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMG 364
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA 270
DGL L+EQMRK G P+++TFL V + CASAEAV+EGF++FE MK +YGI P EHY+
Sbjct: 365 DDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVG 424
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK 330
II VLG +GH+IEA+EF+E+MP EP+ VWEAL N+A+IHGD++LED AEEL+ LDP K
Sbjct: 425 IIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLK 484
Query: 331 AIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRY 390
A+ +K P PP KK++A NML+ KNR+S++R+ LY+ + EK+K LNG M+EAGYVPDTRY
Sbjct: 485 AVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDD-EKLKSLNG-MKEAGYVPDTRY 542
Query: 391 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
VLHDID+EAKE+AL YHSERLAIAYGLISTP R PLRIIKNLR+CGDCHNAIKIMSKIVG
Sbjct: 543 VLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVG 602
Query: 451 RELIVRDNKRFHHFRDGKCSCGDYW 475
RELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 603 RELIVRDNKRFHHFKDGKCSCGDYW 627
>gi|225428796|ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
[Vitis vinifera]
Length = 593
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/420 (59%), Positives = 317/420 (75%), Gaps = 16/420 (3%)
Query: 66 RNPSSNEQE--PKTGTGHSQNTNDPLRGNAQLESLDV--------NLLSLCKEGKVREAI 115
RN SN+ + P G+ N +P AQ+ V +L++LC+EGKV+EA+
Sbjct: 180 RNLPSNQNQSYPHQGSPSQWNNQNP--NQAQIVENQVSHAPPSVADLMNLCQEGKVKEAV 237
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E M + A A F +L +SCG+ K +E K+VH+ S F D++LNNK++EMYG
Sbjct: 238 ELMEKGVRADA--QCFYALFNSCGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGN 295
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C + AR+VFD + R++ SWHLMI+GYA N G DGL L+EQMRK G P+++TFL V
Sbjct: 296 CGSMTDARRVFDHMANRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAV 355
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
+ CASAEAV+EGF++FE MK +YGI P EHY+ II VLG +GH+IEA+EF+E+MP EP
Sbjct: 356 LSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQMPVEP 415
Query: 296 TVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNR 355
+ VWEAL N+A+IHGD++LED AEEL+ LDP KA+ +K P PP KK++A NML+ KNR
Sbjct: 416 SAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKKRTAINMLDGKNR 475
Query: 356 VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAY 415
+S++R+ LY+ + EK+K LNG M+EAGYVPDTRYVLHDID+EAKE+AL YHSERLAIAY
Sbjct: 476 LSEFRNPTLYKDD-EKLKSLNG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAY 533
Query: 416 GLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
GLISTP R PLRIIKNLR+CGDCHNAIKIMSKIVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 534 GLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 593
>gi|357501199|ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 446
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/442 (59%), Positives = 313/442 (70%), Gaps = 25/442 (5%)
Query: 45 LCAYAT-------PNPKVYRNTRFVKKQRNP---SSNEQEPKTGTGHSQNTNDPLRGNAQ 94
C YA P N+RF ++ P + +PK H Q A
Sbjct: 19 FCTYAIHHATNLHPRQNGTNNSRFTPRKTQPLRMGNPSIQPKLN--HHQ---------AP 67
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+ +VN +EG V + +E MGQ A A Y F SLL C +LKS+E+GKRVHE L
Sbjct: 68 HQHKNVNFAHFLQEGNVNQVLELMGQGAFAD--YSDFLSLLKLCEDLKSLELGKRVHEFL 125
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
R S F +VEL N+LI +Y KC + + ARKVFD++ RN+ S +LMI GY NG G DGL
Sbjct: 126 RRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGL 185
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
++F+QMR+ G PD+ETF +V A CA + V+EG + FE MK +YGIVPG+EHY+ ++ +
Sbjct: 186 LVFKQMRQQGVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNI 244
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD 334
G AG L EA EF+E MP E VE+WE LRNFA+IHGD+E ED A+ELL LDPSKA D
Sbjct: 245 FGCAGRLDEAHEFIENMPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPSKAAAD 304
Query: 335 KIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE-KMKGLNGQMREAGYVPDTRYVLH 393
K+PLP RKKQSA NMLEEKNRVS+YR Y+ E + K++GL GQMREAGYVPDTRYVLH
Sbjct: 305 KVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLH 364
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
DIDEE KEKALQYHSERLAIAYGLISTPPR LRIIKNLRICGDCHNAIKIMSKIVGREL
Sbjct: 365 DIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGREL 424
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
IVRDNKRFHHF+DGKCSCGDYW
Sbjct: 425 IVRDNKRFHHFKDGKCSCGDYW 446
>gi|356500039|ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 591
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/376 (61%), Positives = 289/376 (76%), Gaps = 4/376 (1%)
Query: 100 VNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L LCKEGKV+EAIE M + A AG F L D CG KS+E K+ H+ S F
Sbjct: 220 TDLTRLCKEGKVKEAIELMDKGVKADAG--CFDLLFDLCGQSKSLEDAKKAHDHFLQSTF 277
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ LNNK+IEMYG C + AR+VFD + R++ SWHLM+ GYA N G D L LFEQ
Sbjct: 278 RSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMGSWHLMLRGYAYNTNGDDALQLFEQ 337
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M + G ET L V +ACASAE V++ FL+FE MK+ YGI PG+EHY+ ++ VLG +
Sbjct: 338 MNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKSKYGIEPGVEHYMGLLDVLGQSA 397
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
+L EAEEF++++PFEPTV VWE L+++A++HGDV+LED EEL+ LDPSKA+ +KIP P
Sbjct: 398 YLKEAEEFIDQLPFEPTVAVWEKLKHYARVHGDVDLEDYTEELIVSLDPSKAVANKIPTP 457
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
P KK +A NML+ +NR+ +Y++ LY+ + EK+K L+G M+E GYVPDTRYVLHDID+EA
Sbjct: 458 PPKKYTAINMLDGRNRIIEYKNPTLYKDD-EKLKALSG-MKETGYVPDTRYVLHDIDQEA 515
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KE+AL YHSERLAIAYGLISTPPR PLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNK
Sbjct: 516 KEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNK 575
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF+DGKCSCGDYW
Sbjct: 576 RFHHFKDGKCSCGDYW 591
>gi|449438679|ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 688
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/384 (60%), Positives = 291/384 (75%), Gaps = 5/384 (1%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
NA + +D L C EGK++EA+E + Q A D F L + CG KS + K VH
Sbjct: 310 NALVSPID-ELRRFCGEGKLKEAVELLKQGVKADV--DCFHLLFELCGKSKSFDNAKVVH 366
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
+ S+ D++LNN+++EMYG+C + AR+VFD + R++ SWHLM+ GYA NG G
Sbjct: 367 DYFLQSSCRSDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGD 426
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+GL LFE M+ G P+ +TFL V +ACASA AV+EGFLYFE MKNDY I P HY+ +
Sbjct: 427 EGLELFENMKNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGL 486
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ +LG GH+ EA E+VE++P EPTVEVWE L+N+A+IHGDV+LED AEEL+ DLDP+KA
Sbjct: 487 LGILGEPGHIHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKA 546
Query: 332 IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYV 391
+ +KI PP KK+SA +ML+ KNR+ ++R+ LY+ + EK+K L M+E GYVPDTRYV
Sbjct: 547 VSNKISTPPPKKRSAISMLDGKNRIVEFRNPTLYKDD-EKLKALKA-MKEQGYVPDTRYV 604
Query: 392 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGR 451
LHDID+EAKE+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGR
Sbjct: 605 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGR 664
Query: 452 ELIVRDNKRFHHFRDGKCSCGDYW 475
ELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 665 ELIVRDNKRFHHFKDGKCSCGDYW 688
>gi|356521500|ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 588
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/376 (61%), Positives = 289/376 (76%), Gaps = 4/376 (1%)
Query: 100 VNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L LC+EGKV+EAIE M + A AG F+ L DSCG KS+E K+ H+ S F
Sbjct: 217 TDLTRLCREGKVKEAIELMDKGVKADAG--CFALLFDSCGQSKSLEDAKKAHDHFLQSTF 274
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ LNNK+IEMYG C + AR+VFD + R++ SWHLM+ GYA N G + L LFEQ
Sbjct: 275 RSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMDSWHLMMRGYANNTNGDEALQLFEQ 334
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M + G ET L V +ACASAE V++ FL+FE MK+ YGI P + HY+ ++ VLG +
Sbjct: 335 MNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKSKYGIEPVVGHYMGLLDVLGQSA 394
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
+L EAEEF++++PFEPTV VWE L+++A+ HGD +LED EEL+ LDPSKA+ +KIP+P
Sbjct: 395 YLKEAEEFIDQLPFEPTVAVWEKLKHYARAHGDFDLEDYTEELIVSLDPSKAVANKIPMP 454
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
P KK +A NML+ +NR+ +Y++ LY+ + EK+K L+G M+EAGYVPDTRYVLHDID+EA
Sbjct: 455 PPKKYTAINMLDGRNRIIEYKNPTLYKDD-EKLKALSG-MKEAGYVPDTRYVLHDIDQEA 512
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KE+AL YHSERLAIAYGLISTPPR PLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNK
Sbjct: 513 KEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNK 572
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF+DGKCSCGDYW
Sbjct: 573 RFHHFKDGKCSCGDYW 588
>gi|357475405|ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509043|gb|AES90185.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 565
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/416 (56%), Positives = 306/416 (73%), Gaps = 10/416 (2%)
Query: 66 RNPSSNEQEPKTGT-GHSQNTNDPLRG-NAQLESLD----VNLLSLCKEGKVREAIEYMG 119
R + N+ P+ G QN N+ + N Q ++ V+L C+EGKV+EA+E M
Sbjct: 154 RGINQNQWNPQNGNLNQFQNPNNQFQTPNVQEQAPPPPSIVDLTRFCQEGKVKEALELME 213
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+ A A + F L D CG KS+E K+VH+ S F D +++NK+IEMYG C +
Sbjct: 214 KGIKADA--NCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSM 271
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR+VFD + RN+ SWH+MI GYA + G +GL LFEQM + G ET L V +AC
Sbjct: 272 TDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSAC 331
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
SAEAV++ ++Y E MK+ YGI PG+EHY+ ++ VLG +G+L EAEEF+E++PFEPTV V
Sbjct: 332 GSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQLPFEPTVTV 391
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDY 359
+E L+N+A+IHGDV+LED EEL+ LDPSKA+ +KIP PP KK +A +ML+ KNR+ +Y
Sbjct: 392 FETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGKNRIIEY 451
Query: 360 RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIS 419
++ LY+ + EK+ +N M++AGYVPDTRYVLHDID+EAKE+AL YHSERLAIAYGLIS
Sbjct: 452 KNPTLYKDD-EKLIAMNS-MKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 509
Query: 420 TPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
TPPR PLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 510 TPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
>gi|388508872|gb|AFK42502.1| unknown [Medicago truncatula]
Length = 565
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/416 (56%), Positives = 306/416 (73%), Gaps = 10/416 (2%)
Query: 66 RNPSSNEQEPKTGT-GHSQNTNDPLRG-NAQLESLD----VNLLSLCKEGKVREAIEYMG 119
R + N+ P+ G QN N+ + N Q ++ V+L C+EGKV+EA+E M
Sbjct: 154 RGINQNQWNPQNGNLNQFQNPNNQFQTPNVQEQAPPPPSIVDLTRFCQEGKVKEALELME 213
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+ A A + F L D CG KS+E K+VH+ S F D +++NK+IEMYG C +
Sbjct: 214 KGIKADA--NCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSM 271
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR+VFD + RN+ SWH+MI GYA + G +GL LFEQM + G ET L V +AC
Sbjct: 272 TDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSAC 331
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
SAEAV++ ++Y E MK+ YGI PG+EHY+ ++ VLG +G+L EAEEF+E++PFEPTV V
Sbjct: 332 GSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQLPFEPTVTV 391
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDY 359
+E L+N+A+IHGDV+LED EEL+ LDPSKA+ +KIP PP KK +A +ML+ KNR+ +Y
Sbjct: 392 FETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGKNRIIEY 451
Query: 360 RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIS 419
++ LY+ + EK+ +N M++AGYVPDTRYVLHDID+EAKE+AL YHSERLAIAYGLIS
Sbjct: 452 KNPTLYKDD-EKLIAMNS-MKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 509
Query: 420 TPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
TPPR PLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 510 TPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
>gi|449519292|ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g15690-like [Cucumis sativus]
Length = 588
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/413 (56%), Positives = 298/413 (72%), Gaps = 6/413 (1%)
Query: 64 KQRNPSS-NEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDA 122
+ RNP + N + G ++ NA + +D L C EGK++EA+E + Q
Sbjct: 181 EHRNPQAENSNQLNNQAGIQRDGTQNQAPNALVSPID-ELRRFCGEGKLKEAVELLKQGV 239
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
A D F L + CG KS + K VH+ S+ D++LNN+++EMYG+C + A
Sbjct: 240 KADV--DCFHLLFELCGKSKSFDNAKVVHDYFLQSSCRSDLQLNNEVLEMYGRCGSMSDA 297
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
R+VFD + R++ SWHLM+ GYA NG G +GL LFE M+ G P+ +TFL V +ACASA
Sbjct: 298 RRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYVMSACASA 357
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
AV+EGFLYFE MKNDY I P HY+ ++ +LG GH+ EA E+VE++P EPTVEVWE
Sbjct: 358 NAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGHIHEAFEYVEKLPMEPTVEVWET 417
Query: 303 LRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRST 362
L+N+A+IHGDV+LED AEEL+ DLDP+KA+ +KI PP K SA +ML+ KNR+ ++R+
Sbjct: 418 LKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKNXSAISMLDGKNRIVEFRNP 477
Query: 363 DLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
LY+ + K+K L M+E GYVPDTRYVLHDID+EAKE+AL YHSERLAIAYGLISTP
Sbjct: 478 TLYKDD-XKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPA 535
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 536 RTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 588
>gi|357501047|ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/431 (57%), Positives = 300/431 (69%), Gaps = 32/431 (7%)
Query: 59 TRFVKKQRNPSSNEQEPKTGTGHSQNT---NDPLR-GNAQLESL-----------DVNLL 103
T F + ++N + GT +S+ T PLR GN ++ +VN
Sbjct: 17 TPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQPLRMGNPSIQPKLNHHQTPHQHKNVNFA 76
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+EG V + +E MGQ A A Y F SLL C +LKS+E+GKRVHE LR S F +V
Sbjct: 77 HFLQEGNVNQVLELMGQGAFAD--YSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNV 134
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
EL N+LI +Y KC + + ARKVFD++ RN+ S +LMI GY NG G DGL++F+QMR+
Sbjct: 135 ELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQ 194
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G PD+ETF +V A CA + V+EG + FE MK +YGIVPG+EHY+ ++ + G AG L E
Sbjct: 195 GVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNIFGCAGPLDE 253
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKK 343
A+EF+E MP E V+VWE LRNFA+I+GD+E EDRA+ LL DPSKA DK+PLP RKK
Sbjct: 254 AQEFIENMPIEAGVDVWETLRNFARIYGDLEREDRAK-LLTVRDPSKAAADKMPLPQRKK 312
Query: 344 QSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
QSA NMLEEKNRVS+YR L GQ+REAGYVPDTRYVLHDIDEE KEKA
Sbjct: 313 QSAINMLEEKNRVSEYRC-------------LTGQIREAGYVPDTRYVLHDIDEEEKEKA 359
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSERLAIAYGLISTPPR LRIIKNLRICGDCHNAIK MSKIVG +LIVRDNKRFHH
Sbjct: 360 LRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVGMKLIVRDNKRFHH 419
Query: 464 FRDGKCSCGDY 474
F+DGKC+ Y
Sbjct: 420 FKDGKCAISMY 430
>gi|357501237|ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/431 (57%), Positives = 299/431 (69%), Gaps = 32/431 (7%)
Query: 59 TRFVKKQRNPSSNEQEPKTGTGHSQNT---NDPLR-GNAQLESL-----------DVNLL 103
T F + ++N + GT +S+ T PLR GN ++ +VN
Sbjct: 17 TPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQPLRMGNPSIQPKLNHHQAPHQHKNVNFA 76
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+EG V + +E MGQ A A Y F SLL C +LKS+E+GKRVHE LR S F +V
Sbjct: 77 HFLQEGNVNQVLELMGQGAFAD--YSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNV 134
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
EL N+LI +Y KC + + ARKVFD++ RN+ S +LMI GY NG G DGL++F+QMR+
Sbjct: 135 ELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQ 194
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G PD+ETF +V A CA + V+EG + FE MK +YGIVPG+EHY+ + + G AG L E
Sbjct: 195 GVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVDNIFGCAGPLDE 253
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKK 343
A+EF+E MP E V+VWE LRNFA+I+GD+E EDRA+ LL DPSKA DK+PLP RKK
Sbjct: 254 AQEFIENMPIEAGVDVWETLRNFARIYGDLEREDRAK-LLTVRDPSKAAADKMPLPQRKK 312
Query: 344 QSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
QSA NMLEEKNRVS+YR L GQ+REAGYVPDTRYVLHDIDEE KEKA
Sbjct: 313 QSAINMLEEKNRVSEYRC-------------LTGQIREAGYVPDTRYVLHDIDEEEKEKA 359
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSERLAIAYGLISTPPR LRIIKNLRICGDCHNAIK MSKIVG +LIVRDNKRFHH
Sbjct: 360 LRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVGMKLIVRDNKRFHH 419
Query: 464 FRDGKCSCGDY 474
F+DGKC+ Y
Sbjct: 420 FKDGKCAISMY 430
>gi|224070865|ref|XP_002303271.1| predicted protein [Populus trichocarpa]
gi|222840703|gb|EEE78250.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/331 (65%), Positives = 265/331 (80%), Gaps = 2/331 (0%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
E K+VH+ S F DV+LNN +I+MYGKC + AR+VFD + +RN+ SWHLMI+ Y
Sbjct: 6 EDAKKVHDYFLQSTFRGDVKLNNNVIKMYGKCGSMADARRVFDHMPERNMDSWHLMINEY 65
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
A N G +GL LFEQM+K G P ETF V +ACASAEAV+EGFLYFE M ++GI P
Sbjct: 66 ANNDLGDEGLELFEQMKKLGLEPTGETFHAVLSACASAEAVEEGFLYFEEMSREFGISPT 125
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLG 324
+EHY++II VLG + +L EA E++E++PFEPTVE+WEALR +A+ HGD++LED AEEL+
Sbjct: 126 LEHYLSIIDVLGKSAYLNEAVEYIEKLPFEPTVEIWEALRKYARSHGDIDLEDHAEELIV 185
Query: 325 DLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGY 384
LD SKA+ +KIP PP KK + +MLE KNRV+++R+ Y+ + EK+K L +M+ GY
Sbjct: 186 SLDSSKAVANKIPTPPPKKYNLISMLEGKNRVAEFRNPTFYKDD-EKLKELR-EMKTGGY 243
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
VPDTRYVLHDID+EAKE+AL YHSERLAIAYGLISTP RMPLRIIKNLR+CGDCHNAIKI
Sbjct: 244 VPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARMPLRIIKNLRVCGDCHNAIKI 303
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
MSKIVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 304 MSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 334
>gi|297836184|ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
gi|297331814|gb|EFH62233.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
Length = 548
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/374 (54%), Positives = 272/374 (72%), Gaps = 6/374 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
++SLC+ ++AIE + D A + F L +SC NLKS+E K+VH+ S F
Sbjct: 181 VMSLCQRRLYKDAIELL--DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG 238
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D +LNN +I M+G+C + A++VFD + +++ SWHLM+ Y+ NG G D L LFE+M
Sbjct: 239 DPKLNNMVISMFGECRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMGDDALHLFEEMT 298
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
K G P++ETFL VF ACA+ +KE FL+F+ M+N++GI P EHY+ ++ VLG GHL
Sbjct: 299 KQGLKPNEETFLTVFLACATVGGIKEAFLHFDSMRNEHGISPKTEHYLGVLGVLGKCGHL 358
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
IEAE+++ +PFEPT + WEA+RN+A++HGD++LED EEL+ DLD SKA+ +KIP P
Sbjct: 359 IEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDLDSSKAVTNKIPTPQP 418
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K TNM+ K+R+ ++R+ Y+ E ++M G + YVPDTR+VLHDID+EAKE
Sbjct: 419 KSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVV----YVPDTRFVLHDIDQEAKE 474
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYG+I TPPR L IIKNLR+CGDCHN IKIMSKI+GRELIVRDNKRF
Sbjct: 475 QALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRELIVRDNKRF 534
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 535 HHFKDGKCSCGDYW 548
>gi|18397896|ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15690
gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|20197709|gb|AAD17413.2| Expressed protein [Arabidopsis thaliana]
gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|330251336|gb|AEC06430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 579
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/374 (54%), Positives = 273/374 (72%), Gaps = 6/374 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
++ LC+ ++AIE + D A + F L +SC NLKS+E K+VH+ S F
Sbjct: 212 VMRLCQRRLYKDAIELL--DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG 269
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D +LNN +I M+G+C + A++VFD + +++ SWHLM+ Y+ NG G D L LFE+M
Sbjct: 270 DPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT 329
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
K G P++ETFL VF ACA+ ++E FL+F+ MKN++GI P EHY+ ++ VLG GHL
Sbjct: 330 KHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHL 389
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
+EAE+++ +PFEPT + WEA+RN+A++HGD++LED EEL+ D+DPSKA+++KIP PP
Sbjct: 390 VEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPP 449
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K TNM+ K+R+ ++R+ Y+ E ++M G + YVPDTR+VLHDID+EAKE
Sbjct: 450 KSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVV----YVPDTRFVLHDIDQEAKE 505
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYG+I TPPR L IIKNLR+CGDCHN IKIMSKI+GR LIVRDNKRF
Sbjct: 506 QALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRF 565
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 566 HHFKDGKCSCGDYW 579
>gi|357501247|ref|XP_003620912.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495927|gb|AES77130.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 415
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/443 (54%), Positives = 287/443 (64%), Gaps = 58/443 (13%)
Query: 45 LCAYAT-------PNPKVYRNTRFVKKQRNP---SSNEQEPKTGTGHSQNTNDPLRGNAQ 94
C YA P N+RF ++ P + +PK H Q +
Sbjct: 19 FCTYAIHHATNLHPRQNGTNNSRFTPRKTQPLRMGNPSIQPKLN--HHQTPH-------- 68
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+ +VN +EG V + +E MGQ A A Y F SLL C +LKS+E+GKRVHE L
Sbjct: 69 -QHKNVNFAHFLQEGNVNQVLELMGQ--GAFADYSDFLSLLKLCEDLKSLELGKRVHEFL 125
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
R S F +VEL N+LI +Y KC + + ARKVFD++ RN+ SW+LMI GY NG G DGL
Sbjct: 126 RRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGL 185
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
++F+QMR+ G PD+ETF +V A CA + V+EG +EHY+ ++ +
Sbjct: 186 LVFKQMRQQGIVPDEETFALVLAVCALVDGVEEG----------------MEHYLGVVNI 229
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD 334
G AG L EA EF+E + IHGD+E ED A+ELL +DPSKA D
Sbjct: 230 FGCAGRLNEAHEFIENI-----------------IHGDLEREDCADELLTVIDPSKAAAD 272
Query: 335 -KIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEY-EKMKGLNGQMREAGYVPDTRYVL 392
K+PLP RKKQSA NM+EEKNRVS+YR Y E EK++GL GQMREAGYVPDTRYVL
Sbjct: 273 DKVPLPQRKKQSAINMMEEKNRVSEYRCNMPYEEEDDEKLRGLTGQMREAGYVPDTRYVL 332
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HDIDEE KEKALQYHSE LAIAYGLISTPPR LRIIKNLRICGDCHNAIKIMSKIVGRE
Sbjct: 333 HDIDEEEKEKALQYHSECLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRE 392
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
LIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 393 LIVRDNKRFHHFKDGKCSCGDYW 415
>gi|326515404|dbj|BAK03615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/374 (57%), Positives = 280/374 (74%), Gaps = 11/374 (2%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L++LC+EG+ +EA+E + + A A A F L +C K +E ++VH+ L S F
Sbjct: 176 LIALCREGRAKEAVELLEKGARADAA--SFYELAGACSTPKLLEELRKVHDYLLRSPFRA 233
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+++NN+ +EMYG+C N AR+ FD + R+++SWHLMI GYAANG G GL LFE+M+
Sbjct: 234 DLQVNNRFLEMYGRCGNMTHARRTFDHMPDRDMASWHLMIEGYAANGLGDAGLQLFEEMK 293
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ G P TF++V ACA++EA++E FLYF+ M D+GI PG+EHY+ II+VLG +GHL
Sbjct: 294 RCGMAPTARTFVLVLDACANSEAIEEAFLYFDAMSRDHGIEPGMEHYVGIIEVLGKSGHL 353
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EA E+VE++PFEP +WE++ N A+++GD++LEDR EELL LDPSKA K+P PP
Sbjct: 354 NEAVEYVEKLPFEPNAMIWESVLNLARMNGDIDLEDRVEELLVSLDPSKANPKKLPTPPP 413
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K++ NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAKE
Sbjct: 414 KRRLGINMLDGRNKLGEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAKE 464
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRF
Sbjct: 465 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 524
Query: 462 HHFRDGKCSCGDYW 475
HHF++GKCSCGDYW
Sbjct: 525 HHFKEGKCSCGDYW 538
>gi|293334013|ref|NP_001167864.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
gi|223944527|gb|ACN26347.1| unknown [Zea mays]
gi|413946729|gb|AFW79378.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 578
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/374 (56%), Positives = 273/374 (72%), Gaps = 12/374 (3%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L+ LC+EG+V++A+E + D A A F L +C N K +E ++VH+ S F
Sbjct: 217 LMGLCREGRVKDAVELL--DKGACADPAAFYELAAACSNPKLLEELRKVHDFFLRSPFRG 274
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ +NNKL++MY KC AR+ FD + R++ SWH++I GY+ NG G + L LFE M+
Sbjct: 275 DLRVNNKLLKMYAKCAAMPHARRTFDNMPDRDMDSWHIVIDGYSVNGLGDEALRLFELMK 334
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ P T+L+V ACA++EA++E LYF+ M D+GI PG+EHY+ II+VLG +GHL
Sbjct: 335 ECM-SPTSHTYLLVLNACANSEAIEEALLYFDAMHRDHGIEPGVEHYVGIIEVLGKSGHL 393
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EA EF+E++PFEP VWE+L N A+++GD++LEDRAEELL LDPSK+ K+P PP
Sbjct: 394 NEALEFIEKLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKSNHKKLPTPPP 453
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K++ NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAKE
Sbjct: 454 KRRLGINMLDGRNKLVEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAKE 504
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRF
Sbjct: 505 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 564
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 565 HHFKDGKCSCGDYW 578
>gi|242089073|ref|XP_002440369.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
gi|241945654|gb|EES18799.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
Length = 642
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/374 (57%), Positives = 274/374 (73%), Gaps = 12/374 (3%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L+ LC+EG+V++A+E + + A A F L +C N K +E ++VH+ S F
Sbjct: 281 LMGLCREGRVKDAVELLAKGAHADP--PAFYELAAACSNPKLLEELRKVHDFFLRSPFRS 338
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ +NNKL+EMY KC AR+ FD + R++ SWH+MI GY+ NG G + L LFE M+
Sbjct: 339 DLRVNNKLLEMYAKCAAMPHARRTFDNMPDRDMDSWHIMIDGYSVNGLGDEALRLFELMK 398
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ P +T+L+V ACA++EA++E LYF+ M D+GI PG+EHY+ II+VLG +GHL
Sbjct: 399 ECMA-PTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHL 457
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EA EF+E++PFEP VWE+L N AQ++GD++LEDRAEELL LDPSKA K+P PP
Sbjct: 458 NEALEFIEKLPFEPNAMVWESLLNLAQMNGDIDLEDRAEELLVSLDPSKANPKKLPTPPP 517
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K++ NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAKE
Sbjct: 518 KRRLGINMLDGRNKLVEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAKE 568
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRF
Sbjct: 569 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 628
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 629 HHFKDGKCSCGDYW 642
>gi|125547430|gb|EAY93252.1| hypothetical protein OsI_15058 [Oryza sativa Indica Group]
Length = 407
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/375 (57%), Positives = 274/375 (73%), Gaps = 12/375 (3%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L+ L +EG+V+EA+E + D A A F L +C N K +E +++H+ S F
Sbjct: 44 LIGLGREGRVKEAVEKL--DKGARADPQAFYELAAACSNPKLLEELRKIHDFFLRSPFRA 101
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+++NNK++EMY KC AR+ FD + RN+ SWH+MI GYA NG G L LFE+M+
Sbjct: 102 DLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMK 161
Query: 222 -KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
K G P TF +V ACA++EA++E FLYF+ M D+GI PG+EHY+ II+VLG +GH
Sbjct: 162 TKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGH 221
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPP 340
L EA E++E++PFEPT VWE+L N A+++GD++LEDRAEELL LDP+K K+P PP
Sbjct: 222 LNEAVEYIEKLPFEPTATVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPP 281
Query: 341 RKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
K++ NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAK
Sbjct: 282 PKRRLGINMLDGRNKLVEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAK 332
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKR
Sbjct: 333 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKR 392
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+DGKCSCGDYW
Sbjct: 393 FHHFKDGKCSCGDYW 407
>gi|242056975|ref|XP_002457633.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
gi|241929608|gb|EES02753.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
Length = 396
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/374 (55%), Positives = 268/374 (71%), Gaps = 12/374 (3%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L+ LC+EG+V++A+E + + A A F L +C N K IE ++VH+ S F
Sbjct: 35 LIGLCREGRVKDAVELLAKGARADP--PAFYELAAACSNPKLIEELRKVHDFFLRSPFRG 92
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ +NNKL+EMY KC AR+ FD + R++ SWH+M+ GY+ NG G + L +FE M+
Sbjct: 93 DLRVNNKLLEMYTKCGAMPHARRTFDNMPDRDMDSWHIMMDGYSMNGLGDEALRMFELMK 152
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ P T+++V ACA++EA++E FLYF+ M D+GI PG+EHY+ II+VLG +GHL
Sbjct: 153 ECLA-PTSHTYVLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHL 211
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EA E++E++PFEP VWE++ N A+++GD++LEDRAEELL LDPSKA K+ P
Sbjct: 212 NEALEYIEKLPFEPNAMVWESVLNLARMNGDIDLEDRAEELLVSLDPSKANPKKLSTLPP 271
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K++ NML+ +NR+ +YR K + E YVPDTRYVLHDID+EAKE
Sbjct: 272 KRRMGINMLDGRNRLVEYRLPP---------KIERKVVNEQRYVPDTRYVLHDIDQEAKE 322
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRF
Sbjct: 323 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 382
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 383 HHFKDGKCSCGDYW 396
>gi|125589603|gb|EAZ29953.1| hypothetical protein OsJ_14007 [Oryza sativa Japonica Group]
Length = 504
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/375 (57%), Positives = 274/375 (73%), Gaps = 12/375 (3%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L+ L +EG+V+EA+E + D A A F L +C N K +E +++H+ S F
Sbjct: 141 LIGLGREGRVKEAVEKL--DKGARADPQAFYELAAACSNPKLLEELRKIHDFFLRSPFRA 198
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+++NNK++EMY KC AR+ FD + RN+ SWH+MI GYA NG G L LFE+M+
Sbjct: 199 DLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMK 258
Query: 222 -KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
K G P TF +V ACA++EA++E FLYF+ M D+GI PG+EHY+ II+VLG +GH
Sbjct: 259 TKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGH 318
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPP 340
L EA E++E++PFEPT VWE+L N A+++GD++LEDRAEELL LDP+K K+P PP
Sbjct: 319 LNEAVEYIEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPP 378
Query: 341 RKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
K++ NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAK
Sbjct: 379 PKRRLGINMLDGRNKLVEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAK 429
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKR
Sbjct: 430 EQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKR 489
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+DGKCSCGDYW
Sbjct: 490 FHHFKDGKCSCGDYW 504
>gi|217073734|gb|ACJ85227.1| unknown [Medicago truncatula]
Length = 452
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/403 (56%), Positives = 274/403 (67%), Gaps = 25/403 (6%)
Query: 45 LCAYAT-------PNPKVYRNTRFVKKQRNP---SSNEQEPKTGTGHSQNTNDPLRGNAQ 94
C YA P N+RF ++ P + +PK H Q A
Sbjct: 19 FCTYAIHHATNLHPRQNGTNNSRFTPRKTQPLRMGNPSIQPKLN--HHQ---------AP 67
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+ +VN +EG V + +E MGQ A A Y F SLL C +LKS+E+GKRVHE L
Sbjct: 68 HQHKNVNFAHFLQEGNVNQVLELMGQGAFAD--YSDFLSLLKLCEDLKSLELGKRVHEFL 125
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
R S F +VEL N+LI +Y KC + + ARKVFD++ RN+ S +LMI GY NG G DGL
Sbjct: 126 RRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKVPDRNVGSLNLMIGGYNVNGLGIDGL 185
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
++F+QMR+ G PD+ETF +V A CA + V+EG + FE MK +YGIVPG+EHY+ ++ +
Sbjct: 186 LVFKQMRQQGVVPDEETFALVLAVCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNI 244
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD 334
G AG L EA EF+E MP E VE+WE LRNFA+IHGD+E ED A+ELL LDPSKA D
Sbjct: 245 FGCAGRLDEAHEFIENMPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPSKAAAD 304
Query: 335 KIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE-KMKGLNGQMREAGYVPDTRYVLH 393
K+PLP RKKQSA NMLEEKNRVS+YR Y+ E + K++GL GQMREAGYVPDTRYVLH
Sbjct: 305 KVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLH 364
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
DIDEE KEKALQYHSERLAIAYGLISTPPR LRIIKNLRICG
Sbjct: 365 DIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICG 407
>gi|259490048|ref|NP_001159270.1| uncharacterized protein LOC100304360 [Zea mays]
gi|223943115|gb|ACN25641.1| unknown [Zea mays]
gi|413948667|gb|AFW81316.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 580
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/374 (56%), Positives = 272/374 (72%), Gaps = 12/374 (3%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L+ LC+EG+V++A+E + + A D F L +C N K +E ++VH+ S F
Sbjct: 219 LMGLCREGRVKDAVELLSK--GARTDLDTFYELAATCSNPKLLEELRKVHDFFLRSPFRG 276
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ +NN L+ MY KC AR+ FD + R++ SWH+MI GY+ NG G + L LFE M+
Sbjct: 277 DLRVNNMLLAMYAKCAAMPHARRTFDNMPDRDMDSWHIMIDGYSVNGLGDEALRLFELMK 336
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ P +T+L+V ACA++EA++E LYF+ M D+GI PG+EHY+ II+VLG +GHL
Sbjct: 337 ECMA-PTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHL 395
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EA EF+E++PFEP VWE+L N A+++GD++LEDRAEELL LDPSKA K+P PP
Sbjct: 396 NEALEFIEKLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKANPKKLPTPPP 455
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
K++ NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAKE
Sbjct: 456 KRRLGINMLDGRNKLVEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAKE 506
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRF
Sbjct: 507 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF 566
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 567 HHFKDGKCSCGDYW 580
>gi|388511541|gb|AFK43832.1| unknown [Lotus japonicus]
Length = 295
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/294 (64%), Positives = 241/294 (81%), Gaps = 2/294 (0%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+VFD + +N+ SWHLM+ GYA + G D L LFEQM + G ET L V +AC S
Sbjct: 4 ARRVFDHMSSKNVESWHLMLRGYANSTMGDDALRLFEQMNELGLEITSETLLAVLSACGS 63
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
AEAV++ FL+F+ MK+ YGI PG+EHY+ ++ VLG +G+L EAEEF+E++PFEPT+ VWE
Sbjct: 64 AEAVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEKLPFEPTLTVWE 123
Query: 302 ALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS 361
L+N+A+IHGD++LED EEL+ +LDPSKA+ +KIP PP KK + +ML+ +NR+ +Y++
Sbjct: 124 TLKNYARIHGDIDLEDHVEELMVNLDPSKAVANKIPTPPPKKYNHISMLDGRNRIIEYKN 183
Query: 362 TDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTP 421
LY+ + EK+K L G M++AGYVPDTRYVLHDID+EAK +AL YHSERLAIAYGLISTP
Sbjct: 184 PSLYKDD-EKLKALIG-MKDAGYVPDTRYVLHDIDQEAKGQALLYHSERLAIAYGLISTP 241
Query: 422 PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
PR PLRIIKNLR+CGDCHNAIKIMS+IVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 242 PRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 295
>gi|357501057|ref|XP_003620817.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495832|gb|AES77035.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 371
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/369 (57%), Positives = 258/369 (69%), Gaps = 34/369 (9%)
Query: 108 EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
EG V + +E MGQ A A Y F SLL C +LKS+E+GKRVHE LR S F +VEL N
Sbjct: 36 EGNVNQVLELMGQ--GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCN 93
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
+LI +Y KC + + ARKVFD++ RN+ SW+LMI GY NG G DGL++F+QMR+ G P
Sbjct: 94 RLIGLYVKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQMRQQGIVP 153
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
D+ETF +V A CA + V+EG +EHY+ ++ + G AG L EA+EF
Sbjct: 154 DEETFALVLAVCALVDGVEEG----------------MEHYLGVVNIFGCAGPLDEAQEF 197
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD-KIPLPPRKKQSA 346
+E MP E V+VWE LRNFA+I+GD+E EDRA+ELL DPSKA D K+PLP RKKQSA
Sbjct: 198 IENMPIEAGVDVWETLRNFARIYGDLEREDRADELLTVRDPSKAAADDKVPLPQRKKQSA 257
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
NMLEEKNRVS+YR L + + + DT ++ + +EKAL+Y
Sbjct: 258 INMLEEKNRVSEYRCNILGK-------------QVMFLIRDTYSMI--LMRRKREKALRY 302
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAIAYGLISTPPR LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF+D
Sbjct: 303 HSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKD 362
Query: 467 GKCSCGDYW 475
GKCSCGDYW
Sbjct: 363 GKCSCGDYW 371
>gi|38347147|emb|CAD39490.2| OSJNBa0039G19.7 [Oryza sativa Japonica Group]
Length = 557
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/337 (59%), Positives = 253/337 (75%), Gaps = 10/337 (2%)
Query: 140 NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
N K +E +++H+ S F D+++NNK++EMY KC AR+ FD + RN+ SWH+
Sbjct: 230 NPKLLEELRKIHDFFLRSPFRADLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHI 289
Query: 200 MISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
MI GYA NG G L LFE+M+ K G P TF +V ACA++EA++E FLYF+ M D
Sbjct: 290 MIDGYAVNGLGDVALQLFEEMKTKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRD 349
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDR 318
+GI PG+EHY+ II+VLG +GHL EA E++E++PFEPT VWE+L N A+++GD++LEDR
Sbjct: 350 HGIEPGVEHYVGIIEVLGKSGHLNEAVEYIEKLPFEPTDTVWESLLNLARMNGDIDLEDR 409
Query: 319 AEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQ 378
AEELL LDP+K K+P PP K++ NML+ +N++ +YR + EK K +N Q
Sbjct: 410 AEELLVSLDPTKVNPKKLPTPPPKRRLGINMLDGRNKLVEYRLPP----KIEK-KVVNEQ 464
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
YVPDTRYVLHDID+EAKE+AL YHSERLAIAYGLISTP R PLRIIKNLRICGDC
Sbjct: 465 R----YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDC 520
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
HNAIKIMS+IVGRELIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 521 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 557
>gi|255546183|ref|XP_002514151.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546607|gb|EEF48105.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 388
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/390 (53%), Positives = 277/390 (71%), Gaps = 16/390 (4%)
Query: 1 MASLVSIQQHAANSMIISSNFNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTR 60
MAS++S+Q+ N MI+S + +S ++ H+ +L + S K C+ T + K +N+R
Sbjct: 1 MASMLSLQR-TGNPMILSPH----LSQGLNTHTPSL-NPSKFKTFCSSYTAS-KSQKNSR 53
Query: 61 FVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQ 120
+R N +QN NDPLRG++ + +V+L+SLC EGKV EA+E MGQ
Sbjct: 54 TKVYRRKIHQNPPTEFKVQNFNQN-NDPLRGHSTVVLHNVDLMSLCDEGKVEEALECMGQ 112
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
ASA VF +LLD CG+LK ++MGKRVHE LR S F D+E+NNKLIEMYG C + R
Sbjct: 113 GASADCS--VFGALLDCCGSLKLLDMGKRVHEFLRRSTFADDIEMNNKLIEMYGNCGSVR 170
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
AR+VFD++R+RN+ SWHL+ISGYAANGQG DGL+LFE+M+++G PD+ TF VVFAAC+
Sbjct: 171 DARRVFDKMRERNMRSWHLLISGYAANGQGDDGLLLFEEMKESGLRPDENTFSVVFAACS 230
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
SA A+KEG L+FE ++N+YG+ P I+HY+ +I +LG AGHL EA+EF+ERMPFEPT+EVW
Sbjct: 231 SAGAIKEGLLFFEALRNEYGMSPRIDHYLGVIDILGKAGHLCEAKEFIERMPFEPTMEVW 290
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR 360
ALR+FAQIHGD+ELED ++LL LDPS+A +KI LPPRKKQS NMLE KN + +YR
Sbjct: 291 MALRSFAQIHGDIELEDHVQQLLVALDPSEANANKIALPPRKKQSVINMLEGKNSLGEYR 350
Query: 361 STDLYRGE-YEKMKGLNGQMREAGYVPDTR 389
T+ YR E YE NG + Y+ + R
Sbjct: 351 CTEPYREEGYE-----NGTDKIVKYIEEIR 375
>gi|297602164|ref|NP_001052155.2| Os04g0174800 [Oryza sativa Japonica Group]
gi|255675179|dbj|BAF14069.2| Os04g0174800 [Oryza sativa Japonica Group]
Length = 299
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/308 (62%), Positives = 235/308 (76%), Gaps = 10/308 (3%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHP 227
++EMY KC AR+ FD + RN+ SWH+MI GYA NG G L LFE+M+ K G P
Sbjct: 1 MLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMKTKYGIAP 60
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
TF +V ACA++EA++E FLYF+ M D+GI PG+EHY+ II+VLG +GHL EA E+
Sbjct: 61 TAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNEAVEY 120
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSAT 347
+E++PFEPT VWE+L N A+++GD++LEDRAEELL LDP+K K+P PP K++
Sbjct: 121 IEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPPPKRRLGI 180
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
NML+ +N++ +YR + EK K +N Q YVPDTRYVLHDID+EAKE+AL YH
Sbjct: 181 NMLDGRNKLVEYRLPP----KIEK-KVVNEQR----YVPDTRYVLHDIDQEAKEQALLYH 231
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIAYGLISTP R PLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRFHHF+DG
Sbjct: 232 SERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDG 291
Query: 468 KCSCGDYW 475
KCSCGDYW
Sbjct: 292 KCSCGDYW 299
>gi|225430210|ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
[Vitis vinifera]
Length = 807
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 263/399 (65%), Gaps = 22/399 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHE 152
LE +D CK+GKV+EAIE +G D+ + L+ +CG K+++ K VHE
Sbjct: 413 LEEVD----DFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHE 468
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L S V N+++EMY KC + A VF ++ +RNL+SW MI+ +A N G +
Sbjct: 469 SLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEE 528
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
+ LF Q +++G PD + F+ VF AC+ V EG L+F M DYGIVP ++HY +++
Sbjct: 529 AIDLFIQFKESGLKPDGQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMV 588
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI 332
+LG++G+L EA EFVE+MP EP+V+VWE L N ++ G++E+ DR EL+ L+PS+
Sbjct: 589 DMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLT 648
Query: 333 -VDKIPLPPRKKQ-----------SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
K L P K ++ N+LE ++RV +YR+ D E Y K++GL
Sbjct: 649 EQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLK 708
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
QM+EAGYVP+TR+VLHDID+E KE+AL HSERLA+AYGL+S+P R P+R+IKNLR+CG
Sbjct: 709 AQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCG 768
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH A+KI+SK+VGRELI+RD KRFHHF+DG CSC DYW
Sbjct: 769 DCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 807
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/398 (46%), Positives = 262/398 (65%), Gaps = 22/398 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHE 152
LE +D CK+GKV+EAIE +G D+ + L+ +CG K+++ K VHE
Sbjct: 413 LEEVD----DFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHE 468
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L S V N+++EMY KC + A VF ++ +RNL+SW MI+ +A N G +
Sbjct: 469 SLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEE 528
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
+ LF Q +++G PD + F+ VF AC+ V EG L+F M DYGIVP ++HY +++
Sbjct: 529 AIDLFIQFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMV 588
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI 332
+LG++G+L EA EFVE+MP EP+V+VWE L N ++ G++E+ DR EL+ L+PS+
Sbjct: 589 DMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLT 648
Query: 333 -VDKIPLPPRKKQ-----------SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
K L P K ++ N+LE ++RV +YR+ D E Y K++GL
Sbjct: 649 EQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLK 708
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
QM+EAGYVP+TR+VLHDID+E KE+AL HSERLA+AYGL+S+P R P+R+IKNLR+CG
Sbjct: 709 AQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCG 768
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDY 474
DCH A+KI+SK+VGRELI+RD KRFHHF+DG CSC DY
Sbjct: 769 DCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDY 806
>gi|49533766|gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
Length = 741
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 254/391 (64%), Gaps = 17/391 (4%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L LCKEGKV+EA+E + D+ + L+D C KS+E K +HE L S
Sbjct: 351 LDDLCKEGKVKEAVEVLQLLDQQHVTVDLSRYIMLMDVCSEDKSLEDAKSIHEHLVRSHP 410
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+++ NK++EMYGKC + + A VF ++ +RNL+SW MI+ NG G D + LF +
Sbjct: 411 HLDIKMYNKILEMYGKCGSMKDAFLVFRKMPQRNLTSWDTMITWLGKNGLGEDAIELFGE 470
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++TG PD + FL VF AC+ + EG L+FE M DY I +E Y+ ++ +LGS G
Sbjct: 471 FKETGMKPDGQMFLGVFHACSVVGDIVEGMLHFESMSKDYDIDLSMEQYVGVVDMLGSTG 530
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--------- 330
+L EA EF+ERMP EP++EVWE + N +IHG++EL DR E++ LDPS+
Sbjct: 531 YLDEAMEFIERMPIEPSIEVWETMMNLCRIHGNLELGDRCAEIVELLDPSRLDEQSKAGF 590
Query: 331 --AIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGY 384
I KK+SA ++LE +++V +YR+ D ++EK ++GL M+E GY
Sbjct: 591 LAVKASDIAKEKEKKRSAQSLLEARSKVHEYRAGDRSHPDHEKIYALLRGLKQLMKEDGY 650
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
+P+T++VLHD+D+E KE AL HSERLA A GL+++ R P+RIIKNLR+CGDCHNA+KI
Sbjct: 651 IPETKFVLHDVDQETKEDALMAHSERLAFAQGLMNSSARSPIRIIKNLRVCGDCHNALKI 710
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
SK+VGRE+I+RD KRFHH +DG CSC DYW
Sbjct: 711 ASKLVGREIIMRDAKRFHHLKDGLCSCRDYW 741
>gi|125527635|gb|EAY75749.1| hypothetical protein OsI_03662 [Oryza sativa Indica Group]
Length = 796
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/386 (43%), Positives = 255/386 (66%), Gaps = 15/386 (3%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
LC++GKV+EA+E + Q+ + + L+ +CG+ S+ +++H + SA D
Sbjct: 411 LCEDGKVKEAVELLALLQEEGTAVHAPQYFKLMQACGDATSLAEARKIHNQISQSALAVD 470
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
++NNK++EMY KC + A+K+F+ + +RNL+SW+ MISG+ NG G + F+Q ++
Sbjct: 471 TDINNKILEMYAKCGSMEDAKKLFNTIAQRNLASWNTMISGFVYNGLGDEATDFFDQFKQ 530
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
TG D F VF AC +V EG L+FE M+ D+G+ P +EHY++I+ +LG +G++
Sbjct: 531 TGNKSDSTMFTHVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIVNMLGQSGYID 590
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------IV 333
EA EFVE+MP EP+++VWE+L N +++G +EL +R +++ LD S+ V
Sbjct: 591 EAREFVEQMPVEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLNDQSKIGLFPV 650
Query: 334 DKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTR 389
D L K++ N +E +++V +YR+ D E YE+++ L M+EAGY+ DTR
Sbjct: 651 DASELAKEKERKKANAVEARSKVHEYRAGDRSHPEHLKIYEELRYLAAHMKEAGYIADTR 710
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
+VLHD+D+E KE AL HSERLA++YGLI++ R P+R+IKNLR CGDCH A+KI+SK+V
Sbjct: 711 FVLHDVDQETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCHTALKIISKLV 770
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
GR +I RD KRFHHF +G CSC DYW
Sbjct: 771 GRLIIARDAKRFHHFENGVCSCKDYW 796
>gi|115439809|ref|NP_001044184.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|20160509|dbj|BAB89460.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113533715|dbj|BAF06098.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|125571952|gb|EAZ13467.1| hypothetical protein OsJ_03384 [Oryza sativa Japonica Group]
gi|215704215|dbj|BAG93055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 796
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/386 (43%), Positives = 255/386 (66%), Gaps = 15/386 (3%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
LC++GKV+EA+E + Q+ + L+ +CG+ S+ +++H + SA D
Sbjct: 411 LCEDGKVKEAVELLALLQEEGTVVHAPQYFKLMQACGDATSLAEARKIHNQISQSALAVD 470
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
++NNK++EMY KC + A+K+F+ + +RNL+SW+ +ISG+ NG G + F+Q ++
Sbjct: 471 TDINNKILEMYAKCGSMEDAKKLFNTIAQRNLASWNTIISGFVYNGLGDEATDFFDQFKQ 530
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
TG PD F VF AC +V EG L+FE M+ D+G+ P +EHY++I+ +LG +G++
Sbjct: 531 TGNKPDSTMFTHVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIVNMLGQSGYID 590
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------IV 333
EA EFVE+MP EP+++VWE+L N +++G +EL +R +++ LD S+ V
Sbjct: 591 EACEFVEQMPVEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLNDQSKIGLFPV 650
Query: 334 DKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTR 389
D L K++ N +E +++V +YR+ D E YE+++ L M+EAGY+ DTR
Sbjct: 651 DASELAKEKERKKANAVEARSKVHEYRAGDRSHPEHLKIYEELRYLAAHMKEAGYIADTR 710
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
+VLHD+D+E KE AL HSERLA++YGLI++ R P+R+IKNLR CGDCH A+KI+SK+V
Sbjct: 711 FVLHDVDQETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCHTALKIISKLV 770
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
GR +I RD KRFHHF +G CSC DYW
Sbjct: 771 GRLIIARDAKRFHHFENGVCSCKDYW 796
>gi|449449711|ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Cucumis sativus]
Length = 671
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 260/400 (65%), Gaps = 24/400 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRV-H 151
LE LD CKEGK++EA++ + D+ + L+++CG +S+E K V +
Sbjct: 277 LEKLD----EFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCN 332
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
++++ VK V NK++EMY KC + A +F+++ RN++SW MI+ A NG G
Sbjct: 333 YVIKSQTHVK-VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGE 391
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
D + LF + +K G PD + F+ VF+AC+ EG L+FE M +YGI P + HY++I
Sbjct: 392 DAIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSI 451
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ +LGS G + EA EF+E+MP EP V++WE + N ++ HG +EL DR EL+ LD S+
Sbjct: 452 VDMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRL 511
Query: 332 I-VDKIPLPP-----------RKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGL 375
K L P +KK + N+LE ++RV +YR+ D E Y ++GL
Sbjct: 512 NEQSKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGL 571
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
QM+EAGY+P+TR+VLHDID+EAK AL HSERLA+AYGLIS+ R P+R+IKNLR+C
Sbjct: 572 REQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVC 631
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
GDCH+A+KI+SKIVGRELI+RD KRFHHF+DG CSC DYW
Sbjct: 632 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 671
>gi|449485419|ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g25580-like [Cucumis sativus]
Length = 731
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 259/400 (64%), Gaps = 24/400 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRV-H 151
LE LD CKEGK++EA++ + D+ + L+++CG +S+E K V +
Sbjct: 337 LEKLD----EFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCN 392
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
++++ VK V NK++EMY KC + A +F+++ RN++SW MI+ A NG G
Sbjct: 393 YVIKSQTHVK-VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGE 451
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
D + LF + +K G PD + F+ VF+AC+ EG L+FE M +YGI P + HY++I
Sbjct: 452 DAIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSI 511
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ +LGS G + EA EF+E+MP EP V++WE + N ++ HG +EL DR EL+ LD S+
Sbjct: 512 VDMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRL 571
Query: 332 I-VDKIPLPPRK-----------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGL 375
K L P K K + N+LE ++RV +YR+ D E Y ++GL
Sbjct: 572 NEQSKAGLLPVKASDLXKREREEKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGL 631
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
QM+EAGY+P+TR+VLHDID+EAK AL HSERLA+AYGLIS+ R P+R+IKNLR+C
Sbjct: 632 REQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVC 691
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
GDCH+A+KI+SKIVGRELI+RD KRFHHF+DG CSC DYW
Sbjct: 692 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 731
>gi|356510940|ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 180/410 (43%), Positives = 255/410 (62%), Gaps = 25/410 (6%)
Query: 85 TND-PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNL 141
+ND P R A LE LD + C EG V+EA+ + D+ + L+ C
Sbjct: 261 SNDSPYR--ATLEELD----NFCIEGNVKEAVNVLELLEKLHIPVDLPRYLQLMHQCAEN 314
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
KS+E K VH V N+++EMY +C + A +F+ + +RNL++W MI
Sbjct: 315 KSLEEAKIVHRHTSQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMI 374
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
+ A NG D + LF Q + G PD + F+ V AC+ + EG L+FE M DYGI
Sbjct: 375 TQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGVLFACSVLGDIDEGMLHFESMSKDYGI 434
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
VP + H+++++ ++GS GHL EA EF+ERMP EP+ E WE L N ++HG+ L DR E
Sbjct: 435 VPSMTHFVSVVDMIGSIGHLDEAFEFIERMPMEPSAETWETLMNLCRVHGNTGLGDRCAE 494
Query: 322 LLGDLDPSK----AIVDKIPLPP--------RKKQSATNMLEEKNRVSDYRSTDLYRGEY 369
L+ LD S+ + +P+ +K ++ N+LE ++RV +YR+ D E
Sbjct: 495 LVEQLDSSRLNEQSKAGLVPVKASDLTKEKEKKNLASKNLLEVRSRVREYRAGDTSHPEN 554
Query: 370 EK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMP 425
+K ++GL QM+EAGYVP+T++VLHDID+E KE+AL HSERLA+AYGL+++P R P
Sbjct: 555 DKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAVAYGLLNSPARAP 614
Query: 426 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+R+IKNLR+CGDCH A+KI+SK+VGRELI+RD KRFHHF+DG CSC DYW
Sbjct: 615 MRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 664
>gi|224128233|ref|XP_002320276.1| predicted protein [Populus trichocarpa]
gi|222861049|gb|EEE98591.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 232/336 (69%), Gaps = 4/336 (1%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+E + +H+ + S DV NK++EMY KC A VFD +++ NL+SW++MI+
Sbjct: 1 LEEARVIHDCIVRSQSPLDVGTLNKILEMYSKCGAMDEAFSVFDNMQECNLTSWYIMITW 60
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
A NG G D + LF Q ++ G PD + F+ VF+AC + EG L+FE M ++ IVP
Sbjct: 61 LAKNGYGEDAIDLFNQFKQGGLKPDAQIFVGVFSACNVLGDINEGLLHFESMWKEFSIVP 120
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+EHY++I+ +LGS G+L+EA EF+E+MP EP+V+VWE L N + HG +EL DR EL+
Sbjct: 121 SMEHYVSIVDMLGSNGYLVEALEFIEKMPMEPSVDVWETLMNLCRAHGHLELGDRCAELI 180
Query: 324 GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
LDPS+ KK ++ N+L+ ++RV +YR+ D + Y ++G+ QM
Sbjct: 181 EQLDPSRLNEQSNAGLVPKKTASQNLLDVRSRVHEYRAGDTSFPDRDRVYALLRGMKAQM 240
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
++AGY+P TR+VLHDIDEE+KE AL HSERLA A+GL++T R PLR++KNLR CGDCH
Sbjct: 241 KDAGYIPVTRFVLHDIDEESKEDALLAHSERLATAHGLLTTAARSPLRVVKNLRFCGDCH 300
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
NA+KI+SK+VGR+LI+RD KRFHHF+DG CSCGDYW
Sbjct: 301 NAMKIISKLVGRQLIMRDAKRFHHFKDGVCSCGDYW 336
>gi|356528308|ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/410 (43%), Positives = 257/410 (62%), Gaps = 25/410 (6%)
Query: 85 TND-PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNL 141
+ND P RG LE LD + C EG V+EA+E + D+ + L+ CG
Sbjct: 261 SNDSPYRGT--LEELD----NFCIEGNVKEAVEVLELLEKLDIPVDLPRYLQLMHQCGEN 314
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
KS+E K VH V N+++EMY +C + A +F+ + +RNL++W MI
Sbjct: 315 KSLEEAKNVHRHALQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMI 374
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
+ A NG D + LF Q + G PD + F+ V AC + EG +FE M DYGI
Sbjct: 375 TQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGVLFACGMLGDIDEGMQHFESMNKDYGI 434
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
VP + H+++++ ++GS GHL EA EF+E+MP +P+ ++WE L N ++HG+ L D E
Sbjct: 435 VPSMTHFVSVVDMIGSIGHLDEAFEFIEKMPMKPSADIWETLMNLCRVHGNTGLGDCCAE 494
Query: 322 LLGDLDPS----KAIVDKIPLPP------RKKQSATN--MLEEKNRVSDYRSTDLYRGEY 369
L+ LD S ++ +P+ ++K++ TN +LE ++RV +YR+ D + E
Sbjct: 495 LVEQLDSSCLNEQSKAGLVPVKASDLTKEKEKRTLTNKNLLEVRSRVREYRAGDTFHPES 554
Query: 370 EK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMP 425
+K ++GL QM+EAGYVP+T++VLHDID+E KE+AL HSERLAIAYGL+++P R P
Sbjct: 555 DKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAIAYGLLNSPARAP 614
Query: 426 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+R+IKNLR+CGDCH A+KI+SK+VGRELI+RD KRFHHF DG CSC DYW
Sbjct: 615 MRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFNDGLCSCRDYW 664
>gi|326524400|dbj|BAK00583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 252/396 (63%), Gaps = 19/396 (4%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
+E LD LC++G ++EA+E + Q + L+ +C + ++ +++H
Sbjct: 72 IEELD----KLCEDGNIKEALEALPVLQGKGIVLHAPQYFKLMQACADASALAEARQIHN 127
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ S D+++NNK+++MY KC + A+K+F + + +L+SW +ISG+ NG G +
Sbjct: 128 QISQSELAVDIDVNNKILDMYAKCASMEDAKKLFSTMAQHDLTSWSTIISGFVHNGLGEE 187
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
F++ ++TG PD F VF AC +V EG L+FE M+ D+GI P ++HY +I+
Sbjct: 188 ATDFFDRFKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPSVDHYASIV 247
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA- 331
+LG +G++ EA EF+ERMP EP+V++WE+L N +++G +EL DR +++ LDPS+
Sbjct: 248 NMLGQSGYVDEAREFIERMPTEPSVDIWESLMNMCRLNGYLELGDRCAQIIERLDPSRLN 307
Query: 332 --------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
V+ L K++ N E +++V +YR+ D E YE+++ L M
Sbjct: 308 EQSKTGLFPVNASDLAKEKERKKANTAEARSKVHEYRAGDRSHPETLKIYEELRYLAAHM 367
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+EAGY+ DTR+VLHD+D E KE AL HSERLA++YGLI++ R P+R+IKNLR CGDCH
Sbjct: 368 KEAGYIADTRFVLHDVDPETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCH 427
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A+KI+SK+VGR++I RD KRFHHF +G CSC DYW
Sbjct: 428 TALKIISKLVGRQIIARDAKRFHHFENGLCSCKDYW 463
>gi|414880613|tpg|DAA57744.1| TPA: pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 763
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 246/389 (63%), Gaps = 15/389 (3%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L C +G V+EA+E + ++ + L+ +CG+ ++ + +H + S+
Sbjct: 375 LEKFCDDGNVKEALEVLAMLKENRIVLHAPQYFRLMQACGDATALSEARLIHSQISESSL 434
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D + NK++EMY +C + A+K+F + NL+SW+ MISG+ N G + + FE+
Sbjct: 435 TVDTDFQNKIMEMYARCGSMEDAKKIFSSMDHHNLTSWNTMISGFVHNVLGEEAIDFFER 494
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++TG PD F VF AC +V EG L+FE M+ D+GI P EHY +I+ +LG +G
Sbjct: 495 FKQTGDKPDHGMFRHVFLACGILGSVNEGMLHFESMQKDFGIHPTTEHYASIVTMLGQSG 554
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-------- 331
+++EA EFVERMP EP++EVWE L N +++G +EL DR +++ LD S+
Sbjct: 555 YIVEAYEFVERMPVEPSIEVWENLMNMCRLNGFLELGDRCAQIIECLDSSRLNEQSKMGL 614
Query: 332 -IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVP 386
VD L K++ ++ E +++V +YR+ D + YE+++ L M+EAGY+
Sbjct: 615 FPVDVSDLAKEKERKKASVAEARSKVHEYRAGDRSHPDTPKIYEELRYLLAHMKEAGYIA 674
Query: 387 DTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMS 446
DTR+VLHD+D+E KE AL HSERLAI+YGLI++ PR P+R+IKNLR CGDCH A KI+S
Sbjct: 675 DTRFVLHDVDQETKEDALLAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCHTAFKIIS 734
Query: 447 KIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K+VGR++I RD KRFHHF +G CSC DYW
Sbjct: 735 KLVGRQIIARDAKRFHHFENGVCSCKDYW 763
>gi|357130926|ref|XP_003567095.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Brachypodium distachyon]
Length = 771
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 249/389 (64%), Gaps = 16/389 (4%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L LC++GKV+EA+E + Q+ + L+ +C + ++ +++H + S
Sbjct: 384 LEKLCEDGKVKEALEVLPVLQEKGIVLHAPQYIKLMQACPDASALAEARKIHNEISRSGL 443
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D +NNK+++MY KC + A+ +F + + + +SW +ISG+ NG G + F+Q
Sbjct: 444 A-DTVINNKILDMYAKCASMEDAKNLFSTMPQHDATSWSTIISGFVDNGLGEEATDFFDQ 502
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++TG PD F VF AC +V EG L+FE M+ D+GI P ++HY +I+ +LG +G
Sbjct: 503 FKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPAMDHYASIVSMLGQSG 562
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-------- 331
+L EA EF+ERMP EP+++VWE+L N +++G +EL DR +++ LDPS+
Sbjct: 563 YLDEAREFIERMPVEPSIDVWESLMNMCRLNGSMELGDRCAQIIECLDPSRLNEQSKMGL 622
Query: 332 -IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVP 386
++ L K++ N +E +++V +YR+ D E YE+++ L+ M+EAGY+
Sbjct: 623 FPINASDLAKEKERKKANSVEARSKVHEYRAGDRSHPETFRIYEELRYLSAHMKEAGYIA 682
Query: 387 DTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMS 446
DTR+VLHD+D+E KE AL HSERLA++YGLI++ R P+R+IKNLR CGDCH A KI+S
Sbjct: 683 DTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAVRSPIRVIKNLRSCGDCHTAFKIIS 742
Query: 447 KIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K+VGR++I RD KRFHHF +G CSC DYW
Sbjct: 743 KLVGRQIIARDAKRFHHFENGVCSCNDYW 771
>gi|242054359|ref|XP_002456325.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
gi|241928300|gb|EES01445.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
Length = 763
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 247/389 (63%), Gaps = 15/389 (3%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L C++G V+EA+E + ++ + L+ +CG+ ++ + +H + S+
Sbjct: 375 LEKFCEDGNVKEALEVLAMLKENRIVLHPPQYFRLMQACGDAAALSEARLIHSQISESST 434
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V D + N++++MY KC + A+K+F + NL+SW MISG+ N G + + F++
Sbjct: 435 VVDTDFQNEILKMYAKCGSMEDAKKLFSSMDHHNLTSWSTMISGFVHNTLGEEAIDFFDR 494
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++TG PD F VF AC +V EG L+FE M+ D+GI P +EHY +II +LG +G
Sbjct: 495 FKQTGDKPDLGMFRHVFLACGILGSVNEGMLHFESMQKDFGIHPTMEHYASIISMLGQSG 554
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-------- 331
++ EA EFVE+MP EP++EVWE L N +++G +EL DR +++ LD S+
Sbjct: 555 YIAEAYEFVEQMPVEPSIEVWENLMNMCRLNGFLELGDRCAQIIERLDSSRLNEQSKMGL 614
Query: 332 -IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVP 386
VD L K++ ++ E +++V +YR+ D + YE+++ L M+EAGY+
Sbjct: 615 FPVDASDLAKEKERKKASVAEARSKVHEYRAGDRSHPDTPKIYEELRYLLAHMKEAGYIA 674
Query: 387 DTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMS 446
DTR+VLHD+D+E KE AL HSERLAI+YGLI++ PR P+R+IKNLR CGDCH A KI+S
Sbjct: 675 DTRFVLHDVDQETKEDALLAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCHTAFKIIS 734
Query: 447 KIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K+VGR++I RD KRFHHF +G CSC DYW
Sbjct: 735 KLVGRQIIARDAKRFHHFENGVCSCKDYW 763
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/379 (45%), Positives = 234/379 (61%), Gaps = 24/379 (6%)
Query: 101 NLLSLCKEGKVREAIEYMGQDASASAGYDV----FSSLLDSCGNLKSIEMGKRVHELLRT 156
+L LC++G V A+ + D G V + LL C +LK +E+GKR HEL+
Sbjct: 218 DLKRLCRQGNVEAALHVI--DEMERNGVTVSALGLAELLQVCIDLKLLEVGKRAHELVMR 275
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
+ V + NKL+EMY +TR A +VF+++R R L SW+ MI G NG+G + L +
Sbjct: 276 LSSNPSVIVFNKLLEMYFDLGDTRSACRVFEEMRGRTLDSWNRMILGLVKNGEGEEALAI 335
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F +++K G PD TF+ V +AC AV+EG +F M DYGI P +EH+ I+ + G
Sbjct: 336 FSKLKKDGIEPDGSTFIGVLSACECLGAVEEGLAHFNSMSTDYGITPSMEHFAIIVDLFG 395
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
+ EA+EF+ MP EP+ +W+ L+ + + +R +E P+
Sbjct: 396 RLQKIAEAKEFIASMPLEPSSMIWQTLQKYLKT-------ERVDE------PAPLTTGSG 442
Query: 337 PLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID 396
KK+ +N + ++ S +S YEK++ L+ ++EAGYV DTRYVLHD+D
Sbjct: 443 LKLSHKKRVKSNFVSKQKNASPEKSK-----AYEKLRSLHKGVKEAGYVSDTRYVLHDLD 497
Query: 397 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
+EAKEK+L YHSERLAIAYGLISTPP LRIIKNLRICGDCHN IKI+S I RE+IVR
Sbjct: 498 QEAKEKSLLYHSERLAIAYGLISTPPGTTLRIIKNLRICGDCHNFIKILSNIEKREIIVR 557
Query: 457 DNKRFHHFRDGKCSCGDYW 475
DNKRFHHFRDGKCSCGDYW
Sbjct: 558 DNKRFHHFRDGKCSCGDYW 576
>gi|357487235|ref|XP_003613905.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515240|gb|AES96863.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 768
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 241/395 (61%), Gaps = 22/395 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
+E LD S C EG+V+EAI+ + + D L+ CG KS+E K VH
Sbjct: 307 IEELD----SSCMEGEVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAKVVHR 362
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ V N ++EMY +C + A VF + +R+L++ +MI A NG D
Sbjct: 363 YVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAED 422
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
+ LF Q +++G PD + F+ VF AC+ + EG L+FE M DY IVP +EHY++++
Sbjct: 423 SIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEHYVSLV 482
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-- 330
++GS GHL EA EF+E+MP EP+VEVWE L N ++HG+ EL DR EL+ LDPS+
Sbjct: 483 DMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLN 542
Query: 331 -------AIVDKIPLPPRKKQSA---TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
+++ + KKQ+ N + NR+ +YR+ D E Y ++ L
Sbjct: 543 EKSKVGLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYVLLRRLR 602
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
QM+EAGY+ +TR+ LHD+D+E KE AL HSERLAIA GL+++P R +R+IKNLR+CG
Sbjct: 603 VQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCG 662
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
DCH A+KI+S +VGRE I+RD KRFHHF++G CSC
Sbjct: 663 DCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSC 697
>gi|296082000|emb|CBI21005.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/387 (42%), Positives = 232/387 (59%), Gaps = 65/387 (16%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHE 152
LE +D CK+GKV+EAIE +G D+ + L+ +CG K+++ K VHE
Sbjct: 349 LEEVD----DFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHE 404
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L S V N+++EMY KC + A VF ++ +RNL+SW MI+ +A N G +
Sbjct: 405 SLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEE 464
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
+ L DYGIVP ++HY +++
Sbjct: 465 AIDL----------------------------------------KDYGIVPSMKHYASMV 484
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI 332
+LG++G+L EA EFVE+MP EP+V+VWE L N ++ G++E+ DR EL+ L+PS+
Sbjct: 485 DMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRL- 543
Query: 333 VDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT 388
T + ++RV +YR+ D E Y K++GL QM+EAGYVP+T
Sbjct: 544 --------------TEQSKVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPET 589
Query: 389 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKI 448
R+VLHDID+E KE+AL HSERLA+AYGL+S+P R P+R+IKNLR+CGDCH A+KI+SK+
Sbjct: 590 RFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKL 649
Query: 449 VGRELIVRDNKRFHHFRDGKCSCGDYW 475
VGRELI+RD KRFHHF+DG CSC DYW
Sbjct: 650 VGRELIIRDAKRFHHFKDGLCSCRDYW 676
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/370 (41%), Positives = 231/370 (62%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C ++ ++E GK+VH + F DV ++N L++MYGKC A++VF +L
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ +++SW+ MISG A +G G + ++LFEQM +TG P++ TF+VV + C+ A V EG
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M D+GI P EHY ++ + G AG L EA F+ +MP EP VW +L ++H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
G++EL +RA E L +L P + ++ I KK+ +
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + D + YE ++ L QM+ AGY+P+T +VLHD++EE KE L
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+G+ISTPP +R++KNLR+CGDCH A K +S+IV RE+++RD RFHHF+
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360
Query: 466 DGKCSCGDYW 475
DG+CSCGDYW
Sbjct: 361 DGQCSCGDYW 370
>gi|255555475|ref|XP_002518774.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542155|gb|EEF43699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 573
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 203/280 (72%), Gaps = 6/280 (2%)
Query: 100 VNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L+ L +EGKV+EAIE M D A D F +L + CG IE K+VH+ S
Sbjct: 271 ADLMRLFQEGKVKEAIELM--DKGVKADADCFYALFELCG---KIEDAKKVHDYFLQSTC 325
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
DV LN K+IEMYGKC + AR+VFD ++ R++ WHLMI+GYA+N G +GL LFEQ
Sbjct: 326 RGDVRLNKKVIEMYGKCGSMTDARRVFDHMKDRDIDLWHLMINGYASNNLGDEGLQLFEQ 385
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
MR++G P ETFL V +ACASAEAV+EGFL+FE MKN+YG PG EHY+ +I VLG +G
Sbjct: 386 MRQSGLKPTAETFLAVLSACASAEAVEEGFLHFESMKNEYGFNPGTEHYLGVIDVLGKSG 445
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
++ E +E+++++PFEPTV+VW ALRN+A+IHGDV+LEDRAEEL+ LDPSKA+ +KIP P
Sbjct: 446 YINEIQEYIQKLPFEPTVDVWGALRNYARIHGDVDLEDRAEELMVALDPSKAVANKIPTP 505
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM 379
P KK S +MLE KNR+ ++R+ LY+ + EK+K ++ M
Sbjct: 506 PPKKYSLISMLEGKNRIVEFRNPTLYKDD-EKLKAMSKVM 544
>gi|358347047|ref|XP_003637574.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503509|gb|AES84712.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 753
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 235/393 (59%), Gaps = 33/393 (8%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+E LD S C EG+V+EAI DV L KS+E K VH +
Sbjct: 307 IEELD----SSCMEGEVKEAI-------------DVLQVLEKFHIPTKSLEEAKVVHRYV 349
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
V N L+EMY +C + A VF + R+L++ ++MI A NG D +
Sbjct: 350 LQHLSPLKVSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMIKQLAKNGFAEDSI 409
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF Q +++G PD + F+ VF AC+ + EG L+FE M DY IVP + HY++++ +
Sbjct: 410 DLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDM 469
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK---- 330
+GS G+L EA EF+E+MP EP+VEVWE L N ++HG+ EL DR EL+ LDPS+
Sbjct: 470 IGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEK 529
Query: 331 -----AIVDKIPLPPRKKQSA---TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
+++ + KKQ+ N + NR+ +YR+ D E Y ++ L Q
Sbjct: 530 SKVCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQ 589
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
M+EAGY+ +TR+ LHD+D+E KE AL HSERLAIA GL+++P R +R+IKNLR+CGDC
Sbjct: 590 MKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDC 649
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
H A+KI+S +VGRE I+RD KRFHHF++G CSC
Sbjct: 650 HTALKIISDLVGREFIIRDAKRFHHFKNGLCSC 682
>gi|358345888|ref|XP_003637006.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355502941|gb|AES84144.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 679
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 235/393 (59%), Gaps = 33/393 (8%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+E LD S C EG+V+EAI DV L KS+E K VH +
Sbjct: 233 IEELD----SSCMEGEVKEAI-------------DVLQVLEKFHIPTKSLEEAKVVHRYV 275
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
V N L+EMY +C + A VF + R+L++ ++MI A NG D +
Sbjct: 276 LQHLSPLKVSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMIKQLAKNGFAEDSI 335
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF Q +++G PD + F+ VF AC+ + EG L+FE M DY IVP + HY++++ +
Sbjct: 336 DLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDM 395
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK---- 330
+GS G+L EA EF+E+MP EP+VEVWE L N ++HG+ EL DR EL+ LDPS+
Sbjct: 396 IGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEK 455
Query: 331 -----AIVDKIPLPPRKKQSA---TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
+++ + KKQ+ N + NR+ +YR+ D E Y ++ L Q
Sbjct: 456 SKVCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQ 515
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
M+EAGY+ +TR+ LHD+D+E KE AL HSERLAIA GL+++P R +R+IKNLR+CGDC
Sbjct: 516 MKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDC 575
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
H A+KI+S +VGRE I+RD KRFHHF++G CSC
Sbjct: 576 HTALKIISDLVGREFIIRDAKRFHHFKNGLCSC 608
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 217/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S L SC + ++ GK +H+ L + + DV L + L+ MY KC + AR VF+Q+
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+ +W MI+G A +G+ + L FEQM+K G PDK TF V +AC V+EG
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M DYGI P +EHY + +LG AGHL EAE + MPF+P VW AL + +IH
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581
Query: 311 GDVELEDRAEELLGDLDPSK-----AIVDKIPLPPRK----------------KQSATNM 349
DVE +RA E + LDP A+ + R K+ +
Sbjct: 582 SDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSW 641
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +V + D E Y ++ L Q++E GYVPDTR+VLHD+DEE K + L
Sbjct: 642 IEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLC 701
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAI YGL+ TPP P+RI+KNLR+CGDCH A K +SK+VGRE+I RD RFHHF
Sbjct: 702 SHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFV 761
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 762 DGVCSCGDFW 771
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 17/321 (5%)
Query: 85 TNDPLRGNAQLESLDV-----NLLSLCKEGKVREAIEYMGQD--ASASAGYDVFSSLLDS 137
++D L GNA +D ++ LCK+G+++EA+ + DVF LL
Sbjct: 46 SHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQE 105
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
C L+S+E G+ VH + S + L N L+ MY KC + AR+VFD +R RN+ SW
Sbjct: 106 CARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSW 165
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMK 256
MI + A Q + +E M+ G PDK TF+ + A + E ++ G ++ EI K
Sbjct: 166 TAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAK 225
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVEL 315
+ P + +++ + G + +A+ +++P E V W L +AQ G V
Sbjct: 226 AGLELEPRVG--TSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQ-QGQV-- 279
Query: 316 EDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNM-LEEKNRVSDYRSTDLYRGEYEKMKG 374
D A ELL + ++ +KI + T + LE +V Y Y E +
Sbjct: 280 -DVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 375 LNGQMREAGYVPDTRYVLHDI 395
L + G + + R + D+
Sbjct: 339 LITMYCKCGGLKEARKLFGDL 359
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 19/284 (6%)
Query: 42 VKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGT---GHSQNTNDPLRGNAQLESL 98
V LL A+ NP++ + + V + + E EP+ GT G D + + L
Sbjct: 201 VSLLNAFT--NPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258
Query: 99 -DVNLLSL-------CKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGK 148
+ N+++ ++G+V A+E + Q A + ++S+L C ++E GK
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+VH + S + +++ + N LI MY KC + ARK+F L R++ +W M++GYA G
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEH 267
+ + LF +M++ G PDK TF +C+S ++EG ++ +++ Y + ++
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQS 438
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A++ + G + +A +M E V W A+ HG
Sbjct: 439 --ALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQHG 479
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 222/371 (59%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L SC + ++ GKR+H+ L + + DV L + L+ MY KC + A VF+Q+
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412
Query: 191 KRNLSSWHLMISGYAA-NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN+ +W +I+G A +G+ + L F+QM+K G PDK TF V +AC V+EG
Sbjct: 413 ERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 472
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M DYGI P +EHY + +LG AGHL EAE + MPF P VW AL + ++
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRV 532
Query: 310 HGDVELEDRAEELLGDLDPSK--AIV---------------DKIPLPPRK----KQSATN 348
H DVE +RA E + LDP A V +K+ K K+ +
Sbjct: 533 HSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 592
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + D E Y ++ L Q++E GYVPDTR+VLHD+DEE KE+ L
Sbjct: 593 WIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERIL 652
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAI YGL+ TPP MP+RI+KNLR+CGDCH A K +SK+VGRE+I RD +RFHHF
Sbjct: 653 FSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHF 712
Query: 465 RDGKCSCGDYW 475
DG CSCGD+W
Sbjct: 713 ADGVCSCGDFW 723
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 140/304 (46%), Gaps = 14/304 (4%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQD--ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S DV++L CK G+++EA+ M DVF LL C L+S+E G+ VH +
Sbjct: 16 SRDVSVL--CKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAI 73
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S + L N L+ MY KC + AR+VFD +R RN+ SW MI + A + +
Sbjct: 74 LKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAF 133
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIK 273
+E M+ G PDK TF+ + A + E ++ G ++ EI++ + P + +++
Sbjct: 134 KCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVG 191
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRAEELLGDLDPSKAI 332
+ G + +A +R+P E V W L +AQ G V D A ELL + ++
Sbjct: 192 MYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYAQ-QGQV---DVALELLETMQQAEVA 246
Query: 333 VDKIPLPPRKKQSAT-NMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYV 391
+KI + T LE +V Y Y E + L + G + + R +
Sbjct: 247 PNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKL 306
Query: 392 LHDI 395
D+
Sbjct: 307 FSDL 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 24/303 (7%)
Query: 42 VKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGT---GHSQNTNDPLRGNAQLESL 98
V LL A+ NP++ + + V + + E EP+ GT G D + + L
Sbjct: 152 VSLLNAFT--NPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRL 209
Query: 99 -DVNLLSL-------CKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGK 148
+ N+++ ++G+V A+E + Q A + F+S+L C ++E GK
Sbjct: 210 PEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGK 269
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+VH + S + +++ + N LI MY KC ARK+F L R++ +W M++GYA G
Sbjct: 270 KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEH 267
+ + LF +M++ G PDK TF V +C+S ++EG ++ +++ Y + ++
Sbjct: 330 FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQS 389
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
A++ + G + +A +M E V W A+ I G R E L D
Sbjct: 390 --ALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAI-----ITGCCAQHGRCREALEYFD 441
Query: 328 PSK 330
K
Sbjct: 442 QMK 444
>gi|51969704|dbj|BAD43544.1| putative protein [Arabidopsis thaliana]
Length = 537
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 247/418 (59%), Gaps = 26/418 (6%)
Query: 73 QEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV-- 130
QE TG H Q + G++ L+ LD S+C+EGKV++A+E + + + GY V
Sbjct: 131 QENNTGGNHFQQDHS---GHSSLDELD----SICREGKVKKAVEII--KSWRNEGYVVDL 181
Query: 131 --FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ CG+ ++++ K VHE + +S + D+ N +IEMY C + A VF+
Sbjct: 182 PRLFWMAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNS 241
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RNL +W +I +A NGQG D + F + ++ G PD E F +F AC + EG
Sbjct: 242 MPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
L+FE M +YGI+P +EHY++++K+L G+L EA FVE M EP V++WE L N ++
Sbjct: 302 LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSR 359
Query: 309 IHGDVELEDRAEELLGDLDPSKAIVD-KIPLPPRK-----KQSATNMLEEKNRVSDYRST 362
+HGD+ L DR ++++ LD S+ + K L P K K+ M + N Y +
Sbjct: 360 VHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAA 419
Query: 363 -DLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
D+ R E Y +K L M E GYVP ++ LHD+D+E+K++ L H+ER A
Sbjct: 420 GDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTF 479
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ TP R +R++KNLR+C DCHNA+K+MSKIVGRELI RD KRFHH +DG CSC +YW
Sbjct: 480 LDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>gi|15236806|ref|NP_194971.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75209381|sp|Q9SUU7.1|PP346_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32450, mitochondrial; Flags: Precursor
gi|4049347|emb|CAA22572.1| putative protein [Arabidopsis thaliana]
gi|7270149|emb|CAB79962.1| putative protein [Arabidopsis thaliana]
gi|50897242|gb|AAT85760.1| At4g32450 [Arabidopsis thaliana]
gi|332660662|gb|AEE86062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 247/418 (59%), Gaps = 26/418 (6%)
Query: 73 QEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV-- 130
QE TG H Q + G++ L+ LD S+C+EGKV++A+E + + + GY V
Sbjct: 131 QENNTGGNHFQQDHS---GHSSLDELD----SICREGKVKKAVEII--KSWRNEGYVVDL 181
Query: 131 --FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ CG+ ++++ K VHE + +S + D+ N +IEMY C + A VF+
Sbjct: 182 PRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNS 241
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RNL +W +I +A NGQG D + F + ++ G PD E F +F AC + EG
Sbjct: 242 MPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
L+FE M +YGI+P +EHY++++K+L G+L EA FVE M EP V++WE L N ++
Sbjct: 302 LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSR 359
Query: 309 IHGDVELEDRAEELLGDLDPSKAIVD-KIPLPPRK-----KQSATNMLEEKNRVSDYRST 362
+HGD+ L DR ++++ LD S+ + K L P K K+ M + N Y +
Sbjct: 360 VHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAA 419
Query: 363 -DLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
D+ R E Y +K L M E GYVP ++ LHD+D+E+K++ L H+ER A
Sbjct: 420 GDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTF 479
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ TP R +R++KNLR+C DCHNA+K+MSKIVGRELI RD KRFHH +DG CSC +YW
Sbjct: 480 LDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>gi|297821961|ref|XP_002878863.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324702|gb|EFH55122.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 237/391 (60%), Gaps = 24/391 (6%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFSS----LLDSCGNLKSIEMGKRVHELLRTSAFV 160
CK+GKV++A+ + D S + V S L CG + ++ K VH + +S
Sbjct: 223 FCKQGKVKKALYTI--DTLESMNHVVILSRLLRLAKLCGEAEGLQEAKVVHGKISSSVSH 280
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
DV N+ L+EMY C A VF+++ ++NL +W+++I +A NG G D + +F +
Sbjct: 281 LDVSSNHVLLEMYSNCGLANEAANVFEKMSEKNLETWYIIIRCFAKNGFGEDAIDMFARF 340
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+K G PD + F +F AC V EG L+FE M DYGIVP IE Y++++++ G
Sbjct: 341 KKEGNRPDAQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIVPSIEDYVSLVEMYSLPGF 400
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP--- 337
L EA EFVERMP EP V+VWE L N +++HG++EL DR E++ LDP++ ++K
Sbjct: 401 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDRCAEVVELLDPTR--LNKQSREG 458
Query: 338 -LPPRKKQSATNMLEE--------KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGY 384
LP + +L++ K+ + ++++ D E ++ ++ L M E GY
Sbjct: 459 FLPVKASDIEKEILKKRSGILHGVKSTMLNFKAGDTNLPENDELFQLLRNLKMHMVEMGY 518
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
V DT+ LHDID+E+KE AL HSER+A A +++TPPR P ++KNLR+C DCHNA KI
Sbjct: 519 VADTKPALHDIDQESKETALLGHSERIAFARAVLNTPPRKPFTVMKNLRVCVDCHNAWKI 578
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
M+ IVGRE+I+RD KRFHH ++G CSC DYW
Sbjct: 579 MAVIVGREVIMRDIKRFHHMKNGACSCNDYW 609
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 241/408 (59%), Gaps = 28/408 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L S + + + GK + A +Y M Q++ F+ LL++C + +++ G+R+H
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+ +AF DV + LI MY KC + A +VF +L K+N+ SW MI+GYA +G+G +
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKE 699
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L LF QM++ G PD TF+ +ACA A ++EG +F+ MK ++ I P +EHY ++
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMV 758
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-- 330
+ G AG L EA EF+ +M EP VW AL Q+H +VEL ++A + +LDP+
Sbjct: 759 DLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNG 818
Query: 331 --AIVDKIPLPP---------RK--------KQSATNMLEEKNRVSDYRSTDLYRGEYEK 371
I+ I RK K+ + +E +V + S D + E+
Sbjct: 819 VFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEE 878
Query: 372 MKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
+ L+ +MR+ GYVPDTRYVLHD+++ KE+AL YHSERLAI YGL+ TPP P+
Sbjct: 879 IHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIV 938
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I KNLR+CGDCH A K +SKI R++I RD+ RFHHF+DG CSCGD+W
Sbjct: 939 ISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 44 LLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLL 103
L C+ P + R + S + + PK + D + NA L L
Sbjct: 35 LACSSCVPTHEGIETLRML----TTSFSGRCPKGRCVVFADIKDTQKANAVLNRLS---- 86
Query: 104 SLCKEGKVREAIEYMGQ-DASASAGY-DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
K G+ EA++ + + D+S Y +S+LL C K++ G+R++ ++ S
Sbjct: 87 ---KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQP 143
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ + N LI MY KC NT A+++FD +R++++ SW+L++ GY +G + L EQM
Sbjct: 144 DIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKN--DYGIVPGIEHYIAIIKVLGSA 278
+ PDK TF+ + ACA A V +G LY I+K D + G A+I +
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG----TALINMHIKC 259
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + +A + + +P V W ++ HG
Sbjct: 260 GDIGDATKVFDNLPTRDLV-TWTSMITGLARHG 291
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C + +++E GK+VH ++ + ++ + ++ MY KC + A +VFD ++
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
RN+ SW MI+G+A +G+ + + F +M ++G P++ TF+ + AC+S A+K G
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ I++ YG + A++ + G L +A E++ + V W A+
Sbjct: 435 IQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAM 485
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L+ C + S+E+GK VH L+ + D+ ++N L+ M+ C + A+ +F+ +
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR+L SW+ +I+G+ +G+ F+ M+++G PDK TF + ACAS EA+ EG
Sbjct: 576 PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGR 635
Query: 250 LYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
++ D ++ G +I + G + +A + ++P + V W ++
Sbjct: 636 RLHALITEAAFDCDVLVG----TGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITG 690
Query: 307 AQIHG 311
HG
Sbjct: 691 YAQHG 695
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E M QD S F S+L++C + ++++ G+ ++ L+ + + D+ + LI M+ K
Sbjct: 200 EQMVQD-SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C + A KVFD L R+L +W MI+G A +G+ LF++M + G PDK F+ +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
AC EA+++G MK + G I AI+ + G + +A E + +
Sbjct: 319 LRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 296 TVEVWEALRNFAQIHGDVE 314
V + FAQ HG ++
Sbjct: 378 VVSWTAMIAGFAQ-HGRID 395
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 135/303 (44%), Gaps = 10/303 (3%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S + + G++ EA + + ++ F S+L +C + +++ G+++ + +
Sbjct: 380 SWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ + D + L+ MY KC + + A +VF+++ K+N+ +W+ MI+ Y + Q + L
Sbjct: 440 IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIK 273
F+ + K G P+ TF + C S+++++ G +++F IMK G+ + A++
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVS 557
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV 333
+ + G L+ A+ MP V + F Q HG ++ A + + S
Sbjct: 558 MFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ-HGKNQV---AFDYFKMMQESGIKP 613
Query: 334 DKIPLPPRKKQSAT-NMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVL 392
DKI A+ L E R+ + + + GL + G + D V
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 393 HDI 395
H +
Sbjct: 674 HKL 676
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 241/408 (59%), Gaps = 28/408 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L S + + + GK + A +Y M Q++ F+ LL++C + +++ G+R+H
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+ +AF DV + LI MY KC + A +VF +L K+N+ SW MI+GYA +G+G +
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKE 699
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L LF QM++ G PD TF+ +ACA A ++EG +F+ MK ++ I P +EHY ++
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMV 758
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-- 330
+ G AG L EA EF+ +M EP VW AL Q+H +VEL ++A + +LDP+
Sbjct: 759 DLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNG 818
Query: 331 --AIVDKIPLPP---------RK--------KQSATNMLEEKNRVSDYRSTDLYRGEYEK 371
I+ I RK K+ + +E +V + S D + E+
Sbjct: 819 VFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEE 878
Query: 372 MKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
+ L+ +MR+ GYVPDTRYVLHD+++ KE+AL YHSERLAI YGL+ TPP P+
Sbjct: 879 IHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIV 938
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I KNLR+CGDCH A K +SKI R++I RD+ RFHHF+DG CSCGD+W
Sbjct: 939 ISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 44 LLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLL 103
L C+ P + R + S + + PK + D + NA L L
Sbjct: 35 LACSSCVPTHEGIETLRML----TTSFSGRCPKGRCVVFADIKDTQKANAVLNRLS---- 86
Query: 104 SLCKEGKVREAIEYMGQ-DASASAGY-DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
K G+ EA++ + + D+S Y +S+LL C K++ G+R++ ++ S
Sbjct: 87 ---KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQP 143
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ + N LI MY KC NT A+++FD +R++++ SW+L++ GY +G + L EQM
Sbjct: 144 DIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKN--DYGIVPGIEHYIAIIKVLGSA 278
+ PDK TF+ + ACA A V +G LY I+K D + G A+I +
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG----TALINMHIKC 259
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + +A + + +P V W ++ HG
Sbjct: 260 GDIGDATKVFDNLPTRDLV-TWTSMITGLARHG 291
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C + +++E GK+VH ++ + ++ + ++ MY KC + A +VFD ++
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
RN+ SW MI+G+A +G+ + + F +M ++G P++ TF+ + AC+S A+K G
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ I++ YG + A++ + G L +A E++ + V W A+
Sbjct: 435 IQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAM 485
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L+ C + S+E+GK VH L+ + D+ ++N L+ M+ C + A+ +F+ +
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR+L SW+ +I+G+ +G+ F+ M+++G PDK TF + ACAS EA+ EG
Sbjct: 576 PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGR 635
Query: 250 LYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RN 305
++ D ++ G +I + G + +A + ++P + V W ++
Sbjct: 636 RLHALITEAAFDCDVLVG----TGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAG 690
Query: 306 FAQIHG 311
+AQ HG
Sbjct: 691 YAQ-HG 695
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E M QD S F S+L++C + ++++ G+ ++ L+ + + D+ + LI M+ K
Sbjct: 200 EQMVQD-SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C + A KVFD L R+L +W MI+G A +G+ LF++M + G PDK F+ +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
AC EA+++G MK + G I AI+ + G + +A E + +
Sbjct: 319 LRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 296 TVEVWEALRNFAQIHGDVE 314
V + FAQ HG ++
Sbjct: 378 VVSWTAMIAGFAQ-HGRID 395
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 135/303 (44%), Gaps = 10/303 (3%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S + + G++ EA + + ++ F S+L +C + +++ G+++ + +
Sbjct: 380 SWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ + D + L+ MY KC + + A +VF+++ K+N+ +W+ MI+ Y + Q + L
Sbjct: 440 IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIK 273
F+ + K G P+ TF + C S+++++ G +++F IMK G+ + A++
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVS 557
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV 333
+ + G L+ A+ MP V + F Q HG ++ A + + S
Sbjct: 558 MFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ-HGKNQV---AFDYFKMMQESGIKP 613
Query: 334 DKIPLPPRKKQSAT-NMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVL 392
DKI A+ L E R+ + + + GL + G + D V
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 393 HDI 395
H +
Sbjct: 674 HKL 676
>gi|357447727|ref|XP_003594139.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483187|gb|AES64390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 236/395 (59%), Gaps = 26/395 (6%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKR 149
N LE LD S C++GKV+EA+E + + D+ L+ CG KS+E +
Sbjct: 100 NGTLEELD----SFCRDGKVKEAVENLQKLEKLHIHVDLQRCLQLMRICGKAKSLEEARV 155
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH V +N+++EMY +C + A VF + + +L++WH MI NG
Sbjct: 156 VHRHALQHLHPLTVSTDNRVLEMYFECGSLDDAIDVFKSMPEYDLTTWHTMIMQLVKNGF 215
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
D + +F Q + G PD + F+ VF AC+ + EG L+FE M DYGIVP + HY+
Sbjct: 216 AEDSIDIFTQFKNMGLKPDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMAHYV 275
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELED---RAEELLGDL 326
++++++ S GHL EA EF+E+MP EP VEVW+ L N ++HG+ EL D +A LLG+
Sbjct: 276 SLVEMIASIGHLDEALEFIEKMPMEPNVEVWKTLMNSCRVHGNTELGDVKAKAGLLLGEN 335
Query: 327 DP--SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMR 380
K +K+ + P+ ++RV ++R+ D + +K ++GL QM+
Sbjct: 336 SDLIKKNEQNKLTINPKG----------QSRVHEFRNGDTSDPKSDKIYTLLRGLREQMK 385
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
E GY+ +TRY LHDIDEE KE L HSERLA+A GL S+P R +R+IKN RIC DCH
Sbjct: 386 EDGYIAETRYALHDIDEEGKEDVLLAHSERLAVAKGLFSSPARSTIRVIKNFRICPDCHT 445
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A+KI+SKIVGRELI++ KR HHF++G CSC DY+
Sbjct: 446 ALKIISKIVGRELIIQ-AKRCHHFKNGLCSCKDYF 479
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 221/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +GK++H + + F +++ + + L++MY KC N R AR++FD++R
Sbjct: 404 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMR 463
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW MI G A +G D + LFEQM+ G P+ F+ V AC+ A V E +
Sbjct: 464 LRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWK 523
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+GI PG+EHY A+ +LG AG L EA +F+ MP PT VW L + ++H
Sbjct: 524 YFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVH 583
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
+V++ ++ + ++DP ++ I R +K A +
Sbjct: 584 KNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSW 643
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + + D YEK M+ L M + GYVPDT V HD++EE K+ +
Sbjct: 644 IEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVC 703
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAI +G+I+TP +R+ KNLR+C DCH A K +SKIVGRE++VRDN RFHHF+
Sbjct: 704 SHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFK 763
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 764 NGTCSCGDYW 773
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS+L I GK +H +V + + LI+MY KC + +VF L
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLL 361
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+R+ SW+ +I+G NG +GL F QM P +F + ACA + G
Sbjct: 362 TERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 421
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
L+ I +N G I +++ + G++ A + +RM V W A+
Sbjct: 422 QLHGYITRN--GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS-WTAMIMGCA 478
Query: 309 IHG 311
+HG
Sbjct: 479 LHG 481
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 217/372 (58%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ ++L++C N S+E K +H L+ ++ D L N L+ Y KC + A VFD++
Sbjct: 650 TYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM 709
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KRN+ SW+ +I G A +G+G D L LFE+M+ G PD TF+ + +AC+ A ++EG
Sbjct: 710 MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGR 769
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M D+GI P IEHY ++ +LG AG L E E ++ MPF+ +W AL +I
Sbjct: 770 RYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRI 829
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPP--------------RK--------KQSAT 347
HG+V + +RA E LDP A V + L RK K+
Sbjct: 830 HGNVPVAERAAESSLKLDPDNAAV-YVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGR 888
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E +++ + + D E EK+ L M+ GYVPDTR V+HD+DE KE A
Sbjct: 889 SWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENA 948
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ +HSERLAIAYGLIST P P+RI KNLR+C DCH A K ++KIV RE++ RD RFHH
Sbjct: 949 VCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHH 1008
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 1009 FKDGVCSCGDYW 1020
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L K G EA+ Q A ++S+L++C + +++ G+R+H+ + + D
Sbjct: 522 LAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N L+ MY C + + AR+VFD++ +R++ +++ MI GYAA+ G + L LF+++++
Sbjct: 582 AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 641
Query: 223 TGPHPDKETFLVVFAACA---SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
G PDK T++ + ACA S E KE ++ ++K+ Y + + A++ G
Sbjct: 642 EGLKPDKVTYINMLNACANSGSLEWAKE--IHSLVLKDGYLSDTSLGN--ALVSTYAKCG 697
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+A ++M + V W A+ HG
Sbjct: 698 SFSDALLVFDKM-MKRNVISWNAIIGGCAQHG 728
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 70/115 (60%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL++C N ++ G+ +H + F+ D+ + N LI MY +C + + AR +F+++ +++
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ SW MI G A +G GA+ L +F+ M++ G P++ T+ + AC+S A+ G
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
+ S + ++ + G + EA++ + Q + G LL SC + ++E G+ +H
Sbjct: 209 VHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHV 268
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ + DV + N ++ MY KC + AR+VFD++ +++ SW ++I GYA G
Sbjct: 269 EAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEI 328
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+F++M++ G P++ T++ V A + A+K G
Sbjct: 329 AFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ ++L++ +++ GK VH + + D+ + L++MY KC + + R+VF++L
Sbjct: 347 TYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L +W+ MI G A G + ++ QM++ G P+K T++++ AC + A+ G
Sbjct: 407 VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGR 466
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++K+ + +++ A+I + G + +A +M + + W A+
Sbjct: 467 EIHSRVVKDGFMFDISVQN--ALISMYARCGSIKDARLLFNKMVRKDIIS-WTAM 518
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 22 NSKISHSISAHSVTL-KSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTG 80
N K S S+ A+ +L S S VK L + N Y N R K
Sbjct: 63 NGKPSFSVEANCSSLMHSQSRVKFLKRWFNSNGIRYFNGR--------------SKANKL 108
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGN 140
HS D + ++DV ++Y+ Q + D + +L C
Sbjct: 109 HSHTYKDERTITGKDRAMDV--------------VQYLQQQGARVNSCD-YMKMLKRCIE 153
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR--KRNLSSWH 198
+K + G+ VHE + V D N LI MY +C + AR+V+++L +R + SW+
Sbjct: 154 VKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWN 213
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKN 257
M+ GY G + L L +M++ G + T + + ++C S A++ G ++ E MK
Sbjct: 214 AMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKA 273
Query: 258 DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
++ + I+ + G + EA E ++M + V
Sbjct: 274 R--LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 217/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +GK++H + S F +V + + L++MY KC N R AR +FD++
Sbjct: 340 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 399
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW MI GYA +G D + LF++M G P+ F+ V AC+ A V E +
Sbjct: 400 LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWK 459
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M DY I+PG+EHY A+ +LG G L EA EF+ M EPT VW L ++H
Sbjct: 460 YFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 519
Query: 311 GDVELEDRAEELLGDLDPSK--AIV---------------DKIPLPPR----KKQSATNM 349
++EL ++ + L +DP A V K+ + R KK+ A +
Sbjct: 520 KNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSW 579
Query: 350 LEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E KN+V + + D Y E +K L QM GYV DT VLHD++EE K L
Sbjct: 580 IEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLC 639
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAI +G+ISTP +R+ KNLR+C DCH A K +SKIVGRE++VRDN RFHHF+
Sbjct: 640 SHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFK 699
Query: 466 DGKCSCGDYW 475
DGKCSCGD+W
Sbjct: 700 DGKCSCGDFW 709
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L ++ GK +H + + DV + + LI+MY KC + +VF L
Sbjct: 239 LSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ + SW+ +I+G NG +GL F+QM P+ +F + ACA + G
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I+++ + I A++ + G++ A ++M V W A+ +
Sbjct: 359 LHGYIIRSRFDGNVFIAS--ALVDMYAKCGNIRTARWIFDKMELYDMVS-WTAMIMGYAL 415
Query: 310 HG 311
HG
Sbjct: 416 HG 417
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 32/142 (22%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA----- 182
++VF S+L SC +K + G+ VH + D+ N L+ MY K +
Sbjct: 106 HNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKK 165
Query: 183 ------------------------RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
RKVF+ + KR++ SW+ +ISG A NG D LM+
Sbjct: 166 VFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVR 225
Query: 219 QMRKTGPHPDKETF---LVVFA 237
+M PD T L +FA
Sbjct: 226 EMGNADLRPDSFTLSSVLPIFA 247
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 214/371 (57%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++L++C N S+E + +H L+R F D + N L+ Y KC + A VF+++
Sbjct: 533 YINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT 592
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KRN+ SW+ +I G A +G+G D L LFE+M+ G PD TF+ + +AC+ A ++EG
Sbjct: 593 KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRR 652
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+ I+P IEHY ++ +LG AG L EAE ++ MPF+ +W AL +IH
Sbjct: 653 YFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIH 712
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPP--------------RKKQSATNMLEEKNR- 355
G+V + +RA E LD A+V + L RK + +E R
Sbjct: 713 GNVPVAERAAESSLKLDLDNAVV-YVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 771
Query: 356 -----------VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
V++ RS Y ++ L M+ GYVPDTR V+HD+DE KE A+
Sbjct: 772 WIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAV 831
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLAIAYGLISTPP + I KNLR+C DCH A K +SKIV RE+I RD RFHHF
Sbjct: 832 CHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHF 891
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 892 KDGVCSCGDYW 902
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 72/115 (62%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL++C N ++ GK +H + + F D+ + N LI MY +C + + AR VFD++ +++
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKD 393
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ SW MI G A +G GA+ L ++++M++ G P++ T+ + AC+S A++ G
Sbjct: 394 VISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWG 448
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 101/192 (52%), Gaps = 2/192 (1%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A ++S+L++C + ++E G+R+H+ + + D + N L+ MY C +
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSV 480
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ AR+VFD++ +R++ +++ MI GYAA+ G + L LF+++++ G PDK T++ + AC
Sbjct: 481 KDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 540
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
A++ +++ +++ G A++ G +A E+M + V
Sbjct: 541 ANSGSLEWAREIHTLVRKG-GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVIS 598
Query: 300 WEALRNFAQIHG 311
W A+ + HG
Sbjct: 599 WNAIIGGSAQHG 610
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 68/116 (58%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L SC + ++E G+ +H + + DV++ N ++ MY KC + AR+VFD++ K+
Sbjct: 131 SFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKK 190
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW + I GYA G+ +F++M + G P++ T++ V A +S A+K G
Sbjct: 191 SVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L++ + +++ GK VH + + D + L++MY KC + + R+VF++L
Sbjct: 230 YISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLV 289
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R+L +W+ MI G A G + ++ QM++ G P+K T++++ AC ++ A+ G
Sbjct: 290 NRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKE 349
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + K + G+++ A+I + G + +A ++M + + W A+
Sbjct: 350 IHSRVAKAGFTSDIGVQN--ALISMYSRCGSIKDARLVFDKMVRKDVIS-WTAM 400
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
K+G V + ++Y+ Q + D + +L C +K + G++VH+ + V D
Sbjct: 4 KDGAV-DVVQYLQQQGAQVNSSD-YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV 61
Query: 167 NKLIEMYGKCCNTRLARKVFDQLR--KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N LI MY +C + AR+V+ +L +R + SW+ M+ GY G L L QM++ G
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD+ T + ++C S A++ G ++F+ M+ G++ ++ I+ + G + E
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEE 179
Query: 284 AEEFVERMPFEPTV 297
A E ++M + V
Sbjct: 180 AREVFDKMEKKSVV 193
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 236/408 (57%), Gaps = 28/408 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L S + + + G+ + A +Y M Q++ F+ LL++C + +++ G+R+H
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+ +A DV + LI MY KC + A VF L K+N+ SW MI+GYA +G+G +
Sbjct: 634 LITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKE 693
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L LF QM++ G PD TF+ +ACA A +KEG +FE MK D+ I P +EHY ++
Sbjct: 694 ALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMV 752
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-- 330
+ G AG L EA EF+ +M +P +W AL Q+H DVEL ++ + +LDP+
Sbjct: 753 DLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDG 812
Query: 331 --AIVDKIPLPPRKKQSATNM-----------------LEEKNRVSDYRSTDLYRGEYEK 371
I+ I + T M +E RV + S D + E+
Sbjct: 813 VYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEE 872
Query: 372 MKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
+ L+ +M++ GYVPDTRYVLHD+++ KE AL +HSERLAIAYGL+ TPP P+
Sbjct: 873 IHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIV 932
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I KNLR+CGDCH A K++SKI R++I RD+ RFHHF+DG CSCGD+W
Sbjct: 933 ISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C + +++E GKRVH ++ ++ + L+ MY KC + A +VF+ ++
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
RN+ SW MI+G+A +G+ + + F +M ++G P++ TF+ + AC+ A+K+G
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ I+K Y + A++ + G L++A ER+ + V W A+
Sbjct: 429 IHDRIIKAGY--ITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAM 479
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SSLL C K++ G+R+H ++ S D+ + N LI MY KC NT A+++FD++
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP 166
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+L++ GY + + + L EQM + G PDK TF+ + ACA A+ V +G
Sbjct: 167 DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGE 226
Query: 251 YFEIMKN 257
F ++ N
Sbjct: 227 LFSLILN 233
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L+ C + ++E+GK V L+ + F D+ + N L+ M+ C + A +F+ +
Sbjct: 511 FTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+L SW+ +I+G+ +G+ F+ M+++G PD+ TF + ACAS EA+ EG
Sbjct: 571 ERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G++ EA + + ++ F S+L +C +++ G+++H+ + + ++ D
Sbjct: 384 QHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR 443
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MY KC + AR VF+++ K+N+ +W+ MI+ Y + + + + F+ + K G
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEG 503
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD TF + C S +A++ G + + + G + A++ + + G L+ A
Sbjct: 504 IKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSA 562
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGD 312
MP V + F Q HG+
Sbjct: 563 MNLFNDMPERDLVSWNTIIAGFVQ-HGE 589
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E M QD Y F +L++C + K+++ G + L+ + + D+ + LI M+ K
Sbjct: 194 EQMVQDGVKPDKY-TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C A KVF+ L +R+L +W MI+G A + Q LF+ M + G PDK F+ +
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
AC EA+++G MK + G+ I A++ + G + +A E +
Sbjct: 313 LKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN 371
Query: 296 TVEVWEALRNFAQIHGDVE 314
V + FAQ HG +E
Sbjct: 372 VVSWTAMIAGFAQ-HGRME 389
>gi|297802776|ref|XP_002869272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315108|gb|EFH45531.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 468
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 246/426 (57%), Gaps = 24/426 (5%)
Query: 63 KKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDA 122
++ +N +++ GTG ++ G++ L+ LD ++C+EGKV+EA++ +
Sbjct: 54 QRHQNWQTSDACSSYGTGQQDHS-----GHSSLDELD----AICREGKVKEAVDIIKSWR 104
Query: 123 SASAGYDVFSSLLDS--CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
+ D+ L + CG+ ++++ K VHE + +S D+ N +I+MY C +
Sbjct: 105 NEGYVVDLLRLLWIAQLCGDAQALQEAKVVHEFITSSVGTSDISAYNSIIQMYSGCGSAE 164
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
A VF+ + +RNL +W +I +A NGQG D + +F + ++ G PD E F +F AC
Sbjct: 165 DALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDIFSRFKEEGNRPDGEIFKDIFFACG 224
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+ EG L+FE M +YGI P +EHY++++K+L G+L EA FVE M EP V++W
Sbjct: 225 VLGDMNEGLLHFESMVKEYGIFPSVEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLW 282
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP--LPPRKKQSATNMLEEKNRVSD 358
E L N +++HGD L DR ++++ LD S+ + +P + L+ +
Sbjct: 283 ETLMNLSRVHGDFILGDRCQDMVEQLDASRLNKESRAGLVPVKSSDLVKEKLQRMAKGPK 342
Query: 359 YRSTDLYRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
Y S + G+ Y +K L M E GYVP+++ LHD+D+E+K++ L H+E
Sbjct: 343 YGSRHMAAGDISRPENREFYMALKSLKEHMIEIGYVPESKLALHDVDKESKDENLFNHNE 402
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
R A + TP R ++++KN+R+C DCHNA+K+MSKIVGRELI RD KR+HH +DG C
Sbjct: 403 RFAFIRTFLDTPARSTIQVVKNIRVCVDCHNALKLMSKIVGRELISRDAKRYHHMKDGVC 462
Query: 470 SCGDYW 475
SC DYW
Sbjct: 463 SCRDYW 468
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 221/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +GK++H + + F +++ + + L++MY KC N R A+++FD++R
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW MI G A +GQ D + LFEQM G P+ F+ V AC+ V E +
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWK 462
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+GI PG+EHY A+ +LG AG L EA +F+ M PT +W L + ++H
Sbjct: 463 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 522
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
++++ ++ + ++DP+ ++ I R +K A +
Sbjct: 523 XNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSW 582
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E KN+V + + D YEK M+ L M + GYVPDT V HD++EE K+ +
Sbjct: 583 IEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVC 642
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAI +G+I+TP M +R+ KNLR+C DCH A K +SKIVGRE++VRDN RFHHF+
Sbjct: 643 SHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFK 702
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 703 NGTCSCGDYW 712
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G E + + + A+ D F SS+L I GK +H D+
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIY 275
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + LI+MY KC + +VF L +R+ SW+ +I+G NG +GL F QM
Sbjct: 276 VASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK 335
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P +F + ACA + G L+ I +N G I +++ + G++
Sbjct: 336 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN--GFDENIFIASSLVDMYAKCGNIRT 393
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGD----VELEDRAE 320
A++ +RM V W A+ +HG +EL ++ E
Sbjct: 394 AKQIFDRMRLRDMVS-WTAMIMGCALHGQAPDAIELFEQME 433
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 32/153 (20%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC------CNTRL 181
++VF S+L SC L + +G+ +H + D+ N L+ MY K RL
Sbjct: 106 HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRL 165
Query: 182 A--------------------------RKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
RK+F+ + +++L SW+ +I+G A NG + L
Sbjct: 166 GAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +M PD T V A + G
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 218/368 (59%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C + ++E GK++H S F +V + L+++Y KC N A+K+F+++ ++
Sbjct: 428 SVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ 487
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW MI Y +G G D L LF +M++TG D F + AC+ A V +G YF
Sbjct: 488 DVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYF 547
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ MK+DYG+ P +EHY ++ +LG AGHL EA ++ M EP VW AL +IH +
Sbjct: 548 QCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCN 607
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNMLE 351
+EL ++A + L +LDP A ++ I + KKQ +++
Sbjct: 608 IELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVA 667
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
V + D + Y ++ L QMR+AGYVP+T L D++EEAKE L H
Sbjct: 668 VHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSH 727
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAI++G+I+T P +P+RI+KNLR+C DCHNA K +SKIVGRE+IVRD RFHH ++G
Sbjct: 728 SEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNG 787
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 788 FCSCGDYW 795
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 26/290 (8%)
Query: 20 NFNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGT 79
+F+ HSIS H +C Y + +T + +RN +E
Sbjct: 24 SFHHTHLHSISYH------------VCFYFYGPSPLPTSTVVAQLRRNKVKTTREVSACA 71
Query: 80 GHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDS 137
+Q T +R NA + ++ K G +A+ Y Q + VF S++ +
Sbjct: 72 NQTQFTQTDIRNNAVV--WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKA 129
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG+ ++ G++VHE + F DV + L MY KC + AR+VFD++ KR++ SW
Sbjct: 130 CGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSW 189
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKN 257
+ +I+GY+ NGQ + L LF +M+ G P+ T + V CA A+++G +
Sbjct: 190 NAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-----KQIH 244
Query: 258 DYGIVPGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
Y I GIE + ++ L G++ A + ERMP V W A+
Sbjct: 245 CYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR-DVASWNAI 293
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++E G+++H S F + + N L+ MY KC N A K+F+++ K+
Sbjct: 327 SVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK 386
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W+ +ISGY+ +G + L LF +M+ G PD + V ACA A+++G
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQG---- 442
Query: 253 EIMKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ Y I G E + + + + G++ A++ ERMP E V W +
Sbjct: 443 -KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYG 500
Query: 309 IHGDVE 314
IHG E
Sbjct: 501 IHGHGE 506
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ C +L ++E GK++H S DV + N L+ MY KC N A K+F+++ R
Sbjct: 226 SVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR 285
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+++SW+ +I GY+ N Q + L F +M+ G P+ T + V ACA A+++G
Sbjct: 286 DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQG---- 341
Query: 253 EIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ Y I G E A++ + G++ A + ERMP + V W A+ +
Sbjct: 342 -QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYS 399
Query: 309 IHGD------VELEDRAEELLGDLDPSKAIVDKIP 337
HG + +E +A+ + D S AIV +P
Sbjct: 400 QHGHPHEALALFIEMQAQGIKPD---SFAIVSVLP 431
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 217/381 (56%), Gaps = 25/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q++ S + +L +C L ++ +GK VH+L+R++ F + ++ LI MY KC +
Sbjct: 412 QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR++FD + K+N +W+ MISGY +G G + L +F +M +G P TFL V AC
Sbjct: 472 AEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYAC 531
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ A VKEG F M + YG P ++HY ++ +LG AGHL A +F+E MP +P V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSV 591
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSK----AIVDKIPLPPRK-KQSATNMLEEKN 354
WE L +IH D L E L +LDP ++ I R Q+AT K
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 355 R--------------------VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHD 394
R S +S + +EK++ L G+MREAGY P+T LHD
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHD 711
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
++EE +E ++ HSERLAIA+GLI+T P +RIIKNLR+C DCH A K++SKI R ++
Sbjct: 712 VEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIV 771
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFHHF+DG CSCGDYW
Sbjct: 772 VRDANRFHHFKDGVCSCGDYW 792
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H S F+ ++ L +Y K ARK+FD+ +++L SW+ MISGY NG
Sbjct: 341 IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
D + LF +M+ + P+ T + +ACA A+ G +++++ I
Sbjct: 401 TEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVST 459
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + G + EA + MP + V W + + +HG
Sbjct: 460 ALIGMYAKCGSIAEARRLFDFMPKKNEV-TWNTMISGYGLHG 500
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+L + L+ + +G ++H L +T + D L I +Y KC ++A +F + R+
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMASTLFREFRRP 285
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
++ +++ MI GY +NG+ L LF+++ +G T +
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLV 326
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM-RKT 223
L + +++MY K ARKVFD++ +++ W+ MISGY N + + +F + ++
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 224 GPHPDKETFLVVFAACASAEAVKEG 248
D T L + A A + ++ G
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLG 240
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C L ++ +GK VH+L+R++ F + ++ LI MY KC + AR++FD +
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+N +W+ MISGY +GQG + L +F +M +G P TFL V AC+ A VKEG
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M + YG P ++HY ++ +LG AGHL A +F+E M EP VWE L +I
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 310 HGDVELEDRAEELLGDLDPSK----AIVDKIPLPPRK-KQSATNMLEEKNR--------- 355
H D L E L +LDP ++ I R Q+AT K R
Sbjct: 602 HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661
Query: 356 -----------VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
S +S + YEK++ L G+MREAGY P+T LHD++EE +E +
Sbjct: 662 LIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 721
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+ HSERLAIA+GLI+T P +RIIKNLR+C DCH K++SKI R ++VRD RFHHF
Sbjct: 722 KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHF 781
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 782 KDGVCSCGDYW 792
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H S F+ ++ L +Y K ARK+FD+ +++L SW+ MISGY NG
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
D + LF +M+K+ P+ T + +ACA A+ G +++++ I
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVST 459
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + G + EA + M + V W + + +HG
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHG 500
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+L + L+ + +G ++H L +T + D L I +Y KC ++ +F + RK
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREFRKP 285
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
++ +++ MI GY +NG+ L LF+++ +G T +
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLV 326
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ +H ++ L + +++MY K ARKVFD++ +++ W+ MISGY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 207 NGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
N + + +F + ++ D T L + A A + ++ G
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLG 240
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 237/393 (60%), Gaps = 29/393 (7%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
K + + +M Q G+ F+++L +C + ++E G VH + D+ + + L
Sbjct: 677 KAMDMVWFMMQKGQRLDGF-TFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSAL 735
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++MY KC A + F+ + RNL SW+ MISGYA +G G L LF QM+ GP PD
Sbjct: 736 VDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDH 795
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
TF+ V +AC+ A V EGF +F+ M YG+ P +EH+ ++ +LG G L + E+F+
Sbjct: 796 VTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLN 855
Query: 290 RMPFEPTVEVWE-ALRNFAQIHG-DVELEDRAEELLGDLDPSKAI--------------- 332
+MP +P V +W L + +G + L RA E+L +++P+ A+
Sbjct: 856 QMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKW 915
Query: 333 --VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREA 382
V K + R KK++ + + K+ V + + D E YEK+K LNG+MR A
Sbjct: 916 DDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLA 975
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GY+P+TR+ L+D++ E+KE+ L YHSE++A+A+ +++ P +MP+RI+KNLR+CGDCH+A
Sbjct: 976 GYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSAF 1034
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K +S+IV R++++RD+ RFHHF +GKCSCGD+W
Sbjct: 1035 KYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 126 AGYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AG+D F ++L + +L E+GK++H L+ D + N L+ YGKC +
Sbjct: 586 AGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGY 645
Query: 182 ARKVFDQLRKR-NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+F ++ R + SW+ MISGY N + + M + G D TF V +ACA
Sbjct: 646 CENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACA 705
Query: 241 SAEAVKEGFLYF-----EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+ ++ G +++D IV G A++ + G + A F E MP
Sbjct: 706 TVATLERGMEVHGCSVRACLESD--IVIG----SALVDMYAKCGRIDYASRFFEMMP 756
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SCG+ + E+ H L + FV D+ L N LI +Y + + RKVFD++ RNL S
Sbjct: 86 SCGSKDAEEL----HLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
W +ISGY N + LF +M G P+ F V AC
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRAC 184
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 97 SLDVNLLSLCKEGKVREAIE-YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKR----VH 151
SL+ ++ L ++ + EA+E +M S + + +L + +E GKR VH
Sbjct: 352 SLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVH 411
Query: 152 E-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
L+R+ + + N LI MY KC A VF + ++ +W+ MI+G N Q
Sbjct: 412 AFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQF 471
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI 269
+ + F++MR+T +P T + ++CAS + G L+ E +K G+ +
Sbjct: 472 LEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLK--LGLDLDVSVSN 529
Query: 270 AIIKVLGSAGHLIEAEEFVERM 291
A++ + G G++ E ++ M
Sbjct: 530 ALLALYGECGYVKECQKAFSLM 551
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 131 FSSLLDSCGNLK--SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN-TRLARKVFD 187
F S++ +C ++ G ++H L+ + +V DV +N LI MYG AR+ FD
Sbjct: 177 FGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFD 236
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK----TGPHPDKETF-LVVFAACASA 242
+ RNL S + MIS Y G +F M+K G P++ TF ++ A C+ A
Sbjct: 237 SIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLA 296
Query: 243 EAVKEGFLYFEIMKNDY---GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ G + E + G + + A++ AG + A+ ++M + V +
Sbjct: 297 NS---GLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSL 353
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L SC +L I +G+++H DV ++N L+ +YG+C + +K F +
Sbjct: 495 SALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY 554
Query: 193 NLSSWHLMISGYA-ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
+ SW+ +I A + + + F M + G P++ TF+ + AA +S + G +
Sbjct: 555 DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI 614
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ ++K + IE+ A++ G G + E RM
Sbjct: 615 HALVLKRNVAADTAIEN--ALLACYGKCGDMGYCENIFSRM 653
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 212/359 (59%), Gaps = 15/359 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ CGN +E+GK++H L +++ + + LI +Y KC A VF ++
Sbjct: 114 FSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIP 173
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RNL W+ M+ A + LF+QM G P+ TFL V AC+ A V++G
Sbjct: 174 IRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQF 233
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE+MK +YGI PG +HY +++ +LG AG L +A +++MP EPT VW AL +IH
Sbjct: 234 YFELMK-EYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIH 292
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPR----------KKQSATNMLEEKNRVSDY- 359
GD EL + + +L P + + R KK++ + +EE NR+ +
Sbjct: 293 GDTELASFVADRVFELGPVSSAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFA 352
Query: 360 ---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG 416
RS + Y+K++ L +M AGY+ DT +VL ++D E K + ++YHSERLAIA+G
Sbjct: 353 AGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFG 412
Query: 417 LISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LIS PP P+R++KNLR+CGDCH AIK MSK GR +IVRDN RFH F DG CSC DYW
Sbjct: 413 LISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F S +CG L ++G+ VH + + DV + + +++MY KC ARK+FD++
Sbjct: 12 IFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEM 71
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ SW MI GY+ G+ + L LF+Q + TF V C ++ ++ G
Sbjct: 72 PDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELG 130
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 234/412 (56%), Gaps = 27/412 (6%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGK 148
N L S +V + EA++ Q + D S S+L +CG+L ++ +G+
Sbjct: 1256 ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 1315
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
R+HE + ++ L N LI+MY KC AR+VFDQ++ R++ SW MIS Y NG
Sbjct: 1316 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 1375
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+G D + LF +M+ G +PD F+ V +AC+ A + EG YF++M + IVP IEH+
Sbjct: 1376 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHF 1435
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
+ ++ +LG AG + EA F+++MP EP VW AL + +++ ++ + A + L L P
Sbjct: 1436 VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCP 1495
Query: 329 SKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRG 367
++ + + KK + E NRV + + D
Sbjct: 1496 EQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHP 1555
Query: 368 E----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPR 423
+ YE++ L G+M+EAGYVP+T LHD++EE KE L HSE+LAIA+ +++T P
Sbjct: 1556 QSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPG 1615
Query: 424 MPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+RI KNLR+CGDCH A K++SKIVGRE+ +RD RFHHF +G CSCGDYW
Sbjct: 1616 SPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L + + + +G ++H + +V + N LI MYGKC A +V DZ+
Sbjct: 1128 TYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZM 1187
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA-----EA 244
R++ SW+ +++G A NGQ D L + ++M G PD T + A +
Sbjct: 1188 PCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSF 1247
Query: 245 VKEGFL 250
VKE F+
Sbjct: 1248 VKEMFM 1253
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L KL+ Y C R +FD++ K+N+ +++MI Y N +D L++F+ M G
Sbjct: 1062 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 1121
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD T+ V A + +E + G ++ +++ G+ + +I + G G L+E
Sbjct: 1122 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR--VGLDLNVFVGNGLISMYGKCGCLVE 1179
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A ++ MP V W +L
Sbjct: 1180 ACRVLDZMPCRDVVS-WNSL 1198
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N +++F +L ++L SW++MI+ Y N A+ + +F QM PD + V
Sbjct: 1244 NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLP 1303
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC A+ G E + + P + A+I + G L A E ++M F V
Sbjct: 1304 ACGDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV 1362
Query: 298 EVWEALRNFAQIHGD----VELEDRAEEL 322
W ++ + ++G V L R ++L
Sbjct: 1363 S-WTSMISAYGMNGKGRDAVSLFSRMQDL 1390
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 219/370 (59%), Gaps = 28/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +CGNL +I++G++ H L+ F + + N LI MY KC VF+++ +
Sbjct: 691 TSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC-GYEDGFCVFEEMPE 749
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+L +W+ ++ G A NG G + + +FEQM G PD+ +FL V AC+ A V EG+ +
Sbjct: 750 HDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAH 809
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M YGI+P + HY ++ +LG AG+L EAE +E MP +P +WEAL +IH
Sbjct: 810 FNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHR 869
Query: 312 DVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPRK--------KQSATNM 349
+VEL R E LL +L S+ + DK+ RK K+ +
Sbjct: 870 NVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVA-EIRKLMKDQGLTKEPGISW 928
Query: 350 LEEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ KN+ V+ R+ D Y +K G R GY+PDT +VLHD++EE K+ L
Sbjct: 929 IQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELL 988
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+ +G++STP P++IIKNLRICGDCH +K MSK+ R++I+RD RFHHFR
Sbjct: 989 YHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFR 1048
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 1049 DGSCSCGDYW 1058
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 112 REAIEYMGQ-DASASAGYDV-FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
REA+E + + S S D F+S L +C N+ +E+G+ +H L + + + N L
Sbjct: 537 REALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGL 596
Query: 170 IEMYGKCCNT----------RL---------------------ARKVFDQLRKRNLSSWH 198
I MY KC N R+ AR VF+++ KR++ SW
Sbjct: 597 ISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWT 656
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+IS Y G G L LF M G P++ T + +AC + A+K G
Sbjct: 657 AIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG 706
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 46/187 (24%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+V N ++ Y C AR++FDQ+ +RN SW +MISGY + +F +M
Sbjct: 293 KNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKM 352
Query: 221 RKTGPHPDKETFLVVFAACASAE-----------AVKEGF-------------------- 249
+T PD+ F+VV +A + A+K G+
Sbjct: 353 CRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSL 412
Query: 250 ----LYFEIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+FE M +N+Y + +I G L +A + ER+P E TV A+
Sbjct: 413 DLAMHFFETMPERNEYS-------WTTMIAAFAQCGRLDDAIQLYERVP-EQTVATKTAM 464
Query: 304 RN-FAQI 309
+AQ+
Sbjct: 465 MTAYAQV 471
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F +L + L +E+ + + + + DV + + ++ Y + + LA F+ +
Sbjct: 363 IFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETM 422
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW MI+ +A G+ D + L+E++ P T + A A +++
Sbjct: 423 PERNEYSWTTMIAAFAQCGRLDDAIQLYERV----PEQTVATKTAMMTAYAQVGRIQKAR 478
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L F+ + N P + + AII G L EA++ ++MP + + W A+ I
Sbjct: 479 LIFDEILN-----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSAS-WAAM-----I 527
Query: 310 HGDVELEDRAE--ELLGDLDPSKAI 332
G V+ E+ E ELL +L S ++
Sbjct: 528 AGFVQNEESREALELLIELHRSGSV 552
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 147 GKRVHELLRTSAFV-KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
GK L AFV K++ L+ Y K AR+VF+ + +RN+ SW+ MISGY
Sbjct: 216 GKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYV 275
Query: 206 ANGQGADGLMLFEQM 220
NG + LF++M
Sbjct: 276 QNGDLKNARKLFDEM 290
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 177 CNTRL-----------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
CNTR+ AR+VF+++ +R++ SW+ MI+GY+ NG+ + +LF+
Sbjct: 174 CNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG--- 230
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
+ T+ ++ A ++E FE M + + A+I G L A
Sbjct: 231 -KNIRTWTILLTGYAKEGRIEEAREVFESMTER-----NVVSWNAMISGYVQNGDLKNAR 284
Query: 286 EFVERMPFEPTVEVWEAL 303
+ + MP E V W ++
Sbjct: 285 KLFDEMP-EKNVASWNSV 301
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + + A+ +F ++ +N +SW MI+G+ N + + L L ++ ++G
Sbjct: 493 NAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV 552
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P +F +ACA+ V+ G
Sbjct: 553 PSDSSFTSALSACANIGDVEIG 574
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 138 CGNLK-SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
CG L +I++ +RV E + V ++ Y + + AR +FD++ N+ +
Sbjct: 440 CGRLDDAIQLYERVPE--------QTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVA 491
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W+ +I+GY NG + LF++M P + ++ + A E +E L E+
Sbjct: 492 WNAIIAGYTQNGMLKEAKDLFQKM----PVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAG 279
++ G VP + + + + G
Sbjct: 548 RS--GSVPSDSSFTSALSACANIG 569
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 139 GNLKSIEMGKRV-HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
G L +E +RV +E+++ +DV N +I Y + AR +FD +N+ +W
Sbjct: 182 GRLGRVEEARRVFNEMIQ-----RDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTW 236
Query: 198 HLMISGYAANGQGADGLMLFEQM 220
++++GYA G+ + +FE M
Sbjct: 237 TILLTGYAKEGRIEEAREVFESM 259
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 215/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL++C + ++E GKRVH + DV + LI MY KC + A++VFD +
Sbjct: 737 FVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNII 796
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ +W+ MI+ YA +G + L F M K G PD TF + +AC A V EG+
Sbjct: 797 EKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQ 856
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M+++YG++P IEHY ++ +LG A EAE + +MPF P VWE L +IH
Sbjct: 857 IFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIH 916
Query: 311 GDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
G++ L + A LL ++ + D + R +K+ +
Sbjct: 917 GNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSW 976
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E N + ++ + D E Y ++K L+ +M EAGY PDT++VLHD+ + +E +L
Sbjct: 977 IEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLC 1036
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAIAYGLI TPP P+RI KNLRICGDCH A K +SK+VGRE+I RD+ RFH F+
Sbjct: 1037 THSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFK 1096
Query: 466 DGKCSCGDYW 475
+GKCSC DYW
Sbjct: 1097 NGKCSCEDYW 1106
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L C N +++E+GK++H + S DV L N LI MY +C + + AR VF L
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+ R++ SW MI G A G+ + LF QM+ G P K TF + C S+ + EG
Sbjct: 594 QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGK 653
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ I+ + Y + G+ + A+I +G + +A E ++MP V + + +AQ
Sbjct: 654 KVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQ 711
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 24/308 (7%)
Query: 21 FNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGT- 79
F S IS VT + LL A+ TP+ + + + K + + GT
Sbjct: 217 FGQMSSEGISPDKVTY-----INLLDAFTTPS--MLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 80 --------GHSQNTNDPLRGNAQLESLDVNLL--SLCKEGKVREAIE--YMGQDASASAG 127
G + +G A + + N L +L + G EA E Y + +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ S+L++C K++E GK +H + DV++ N LI MY +C + AR++F
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ KR+L SW+ +I+GYA + + L++QM+ G P + TFL + +ACA++ A +
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G ++ +I+++ GI A++ + G L+EA+ E + W ++
Sbjct: 450 GKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-WNSMIAG 506
Query: 307 AQIHGDVE 314
HG E
Sbjct: 507 HAQHGSYE 514
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L C + ++ GK+V + S + D + N LI Y K + AR+VFD++
Sbjct: 635 TFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKM 694
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
R++ SW+ +I+GYA NG G + QM++ P+K +F+ + AC+S A++EG
Sbjct: 695 PSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGK 754
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ EI+K + + A+I + G EA+E + + E V W A+ N
Sbjct: 755 RVHAEIVKRK--LQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYA 811
Query: 309 IHG 311
HG
Sbjct: 812 QHG 814
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LL +C + + KR+H + + D+ L+N LI MY KC + A +VF ++
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+R++ SW+ +IS YA G LFE+M+ G P+K T++ + AC S ++ G
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
++ +I+K Y P +++ +++ + G G L A +
Sbjct: 149 KIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQ 184
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q G F LL +C N + GK +HE + S + L N L+ MY +C +
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A+ VF+ + R++ SW+ MI+G+A +G LF++M+ PD TF V + C
Sbjct: 483 MEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542
Query: 240 ASAEAVKEG 248
+ EA++ G
Sbjct: 543 KNPEALELG 551
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C + +E GK++H + + + +D + N L+ MYGKC + AR+VF +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ S++ M+ YA + L LF QM G PDK T++ + A + + EG
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 216/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L++CG L ++E GK VH D + LI MY KC AR VFD++ R
Sbjct: 523 SILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR 582
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W+ M++GY +G G + + LF++M K P++ TF V +AC A V+EG F
Sbjct: 583 DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIF 642
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
IM+ D+ + PG +HY ++ +LG AG L EAEEF++RMP EP + VW AL + H +
Sbjct: 643 RIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDN 702
Query: 313 VELEDRAEELLGDLDPSKAIV---------------DKIPL------PPRKKQSATNMLE 351
V+L + A + L+PS A V D + KK + +E
Sbjct: 703 VQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIE 762
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
R+ + + D E + +++ L +M+EAGY PD R+VLHD+DE KE+AL +H
Sbjct: 763 IDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHH 822
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIAYGL+ TPP P+RI+KNLR+CGDCH A K +SKI RE++ RD RFH+F++G
Sbjct: 823 SEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNG 882
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 883 TCSCGDFW 890
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 43/357 (12%)
Query: 110 KVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
K+ EA E + A S F SLL+SC +++ G+R+H + DV + N
Sbjct: 260 KLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG-QGADGL----MLFEQMRK 222
LI MY KC + AR+ FD++ KR++ SW MI+GYA +G Q + L L E+MR+
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G P+K TF+ + AC+ A+++G ++ EI K + ++ AI + G +
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQ--TAIFNMYAKCGSI 437
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EAE+ +M V W +L GD+ AE++ ++
Sbjct: 438 YEAEQVFSKME-NKNVVAWASLLTMYIKCGDL---TSAEKVFSEM--------------- 478
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDE---- 397
S N++ ++ Y + G+ K+ L M+ G+ PD ++ ++
Sbjct: 479 ---STRNVVSWNLMIAGYAQS----GDIAKVFELLSSMKVEGFQPDRVTIISILEACGAL 531
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
A E+ H+E A+ GL S + +I CG+ A + KI R+ +
Sbjct: 532 SALERGKLVHAE--AVKLGLESDTV-VATSLIGMYSKCGEVTEARTVFDKISNRDTV 585
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
LCK G+++EAI+ +G + + + +++ C L+ E GK VH+ L D
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L N LI Y K + +VF ++ R++ +W MI+ YA N A FE+M+
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P++ TFL + AC + +++ ++K G+ + A+I + G +
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKAS-GMETDVAVATALITMYSKCGEIS 231
Query: 283 EAEEFVERMPFEPTVEVWEAL 303
A E ++M E V W A+
Sbjct: 232 LACEIFQKMK-ERNVVSWTAI 251
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+DA+ F S+L +C N +E + +H +++ S DV + LI MY KC
Sbjct: 171 KDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEI 230
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
LA ++F ++++RN+ SW +I A + + + L+E+M + G P+ TF+ + +C
Sbjct: 231 SLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSC 290
Query: 240 ASAEAVKEG 248
+ EA+ G
Sbjct: 291 NTPEALNRG 299
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC------------- 176
F S+L +C ++E G+++H + F D L + MY KC
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447
Query: 177 -----------------C-NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
C + A KVF ++ RN+ SW+LMI+GYA +G A L
Sbjct: 448 ENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLS 507
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
M+ G PD+ T + + AC + A++ G ++ E +K G+ ++I +
Sbjct: 508 SMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK--LGLESDTVVATSLIGMYSK 565
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + EA +++ TV W A+ HG
Sbjct: 566 CGEVTEARTVFDKISNRDTV-AWNAMLAGYGQHG 598
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/371 (43%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C NL + E GK++H + FV D+ N L+ MY KC + A + F +L
Sbjct: 536 VCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL 595
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF QM K G P+ T + V AC A V E
Sbjct: 596 TERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK 655
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
LYFE M+ +G P EHY +I +LG AG + EA E V +MPFE VW AL A+I
Sbjct: 656 LYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARI 715
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H DVEL RA E+L L+P K A V ++ + KK+ +
Sbjct: 716 HKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMS 775
Query: 349 MLEEKNRVSDYRSTDL--YRGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + D YR + Y K+ L+ M +AGYVP LHD+++ KE L
Sbjct: 776 WIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLL 835
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LA+A+GLI+TP P+R+ KNLR+C DCH A K + KIV RE+IVRD RFHHF
Sbjct: 836 YHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHF 895
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 896 KDGSCSCGDYW 906
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +C +K + +GK+VH ++ S F DV + N L+ MY KC ++++FD++
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+RN+ SW+ + S Y + + LF +M +G P++ + + AC G
Sbjct: 220 ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K Y P + A++ + G L +A E++ +P + W A+ +
Sbjct: 280 IHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVL 336
Query: 310 HGDVELEDRAEELLG-----------------DLDPSKAIVD---KIPLPPRKKQSATNM 349
H E ++A ELLG DL S +VD K L + A N+
Sbjct: 337 H---EHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM-AFNL 392
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLN 376
L EK+ ++ Y +E M+ L+
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALS 419
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S LL C KS+ G ++H + S D + N LI +Y KC ARK+ D+
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESS 118
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ +L SW +ISGYA NG G LM F +M G ++ TF V AC+ + ++ G
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIG-- 176
Query: 251 YFEIMKNDYG--IVPGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
K +G +V G E + + L ++++ + +P E V W AL
Sbjct: 177 -----KQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP-ERNVVSWNAL 229
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L S L+ + + ++VH L S F D+ + N LI+ YGKC + A ++F++
Sbjct: 436 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 495
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+L S+ MI+ YA GQG + L LF +M+ PD+ + ACA+ A ++G
Sbjct: 496 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 555
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I+K YG V I +++ + G + +A + E + W A+
Sbjct: 556 LHVHILK--YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQ 612
Query: 310 HG 311
HG
Sbjct: 613 HG 614
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
+M +++H L D+ ++ L++MY KC AR F+ L +++L +W+ +ISGY
Sbjct: 349 QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG--IV 262
+ + + L LF +M K G ++ T + + A + V + + +G +
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV-------HVCRQVHGLSVK 461
Query: 263 PGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
G I ++ L G H+ +AE E V + +AQ
Sbjct: 462 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQ 511
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/371 (43%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C NL + E GK++H + FV D+ N L+ MY KC + A + F +L
Sbjct: 563 VCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL 622
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF QM K G P+ T + V AC A V E
Sbjct: 623 TERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK 682
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
LYFE M+ +G P EHY +I +LG AG + EA E V +MPFE VW AL A+I
Sbjct: 683 LYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARI 742
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H DVEL RA E+L L+P K A V ++ + KK+ +
Sbjct: 743 HKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMS 802
Query: 349 MLEEKNRVSDYRSTDL--YRGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + D YR + Y K+ L+ M +AGYVP LHD+++ KE L
Sbjct: 803 WIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLL 862
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LA+A+GLI+TP P+R+ KNLR+C DCH A K + KIV RE+IVRD RFHHF
Sbjct: 863 YHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHF 922
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 923 KDGSCSCGDYW 933
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 7/226 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +C +K + +GK+VH ++ S F DV + N L+ MY KC ++++FD++
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+RN+ SW+ + S Y + + LF +M +G P++ + + AC G
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K Y P + A++ + G L +A E++ +P + W A+ +
Sbjct: 280 IHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVL 336
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNR 355
H E ++A ELLG + S + L K A L+E R
Sbjct: 337 H---EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR 379
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S LL C KS+ G ++H + S D + N LI +Y KC N ARK+ D+
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESS 118
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ +L SW +ISGYA NG G LM F +M G ++ TF V AC+ + ++ G
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIG-- 176
Query: 251 YFEIMKNDYG--IVPGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
K +G +V G E + + L ++++ + +P E V W AL
Sbjct: 177 -----KQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP-ERNVVSWNAL 229
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L S L+ + + ++VH L S F D+ + N LI+ YGKC + A ++F++
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 522
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+L S+ MI+ YA GQG + L LF +M+ PD+ + ACA+ A ++G
Sbjct: 523 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 582
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I+K YG V I +++ + G + +A + E + W A+
Sbjct: 583 LHVHILK--YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQ 639
Query: 310 HG 311
HG
Sbjct: 640 HG 641
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 113 EAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+A+E +GQ + ++F SS L +C + E+G+++H L D+ ++ L+
Sbjct: 342 QALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLV 401
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC AR F+ L +++L +W+ +ISGY+ + + L LF +M K G ++
Sbjct: 402 DMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQT 461
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYG--IVPGIEHYIAIIKVL----GSAGHLIEA 284
T + + A + V + + +G + G I ++ L G H+ +A
Sbjct: 462 TLSTILKSTAGLQVV-------HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 514
Query: 285 EEFVERMPFEPTVEVWEALRNFAQ 308
E E V + +AQ
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQ 538
>gi|51969930|dbj|BAD43657.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 615
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 233/393 (59%), Gaps = 26/393 (6%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDV-FSSLL---DSCGNLKSIEMGKRVHELLRTSAF 159
+ CK GKV++A+ + D AS Y V S LL CG + ++ K VH + S
Sbjct: 228 AFCKHGKVKKALYTI--DILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVS 285
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ N+ L+EMY C A VF+++ ++NL +W ++I +A NG G D + +F +
Sbjct: 286 HLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSR 345
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++ G PD + F +F AC V EG L+FE M DYGI P IE Y++++++ G
Sbjct: 346 FKEEGDIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPG 405
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK---- 335
L EA EFVERMP EP V+VWE L N +++HG++EL D E++ LDP++ ++K
Sbjct: 406 FLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR--LNKQSRE 463
Query: 336 --IPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREA 382
IP+ KK+S + K+ + ++R+ D E ++ ++ L M E
Sbjct: 464 GFIPVKASDVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEV 522
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GYV +TR LHDID+E+KE L HSER+A A ++++ PR P +IKNLR+C DCHNA+
Sbjct: 523 GYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNAL 582
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KIMS IVGRE+I RD KRFH ++G C+C DYW
Sbjct: 583 KIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>gi|79563130|ref|NP_180129.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546773|sp|Q680H3.2|PP170_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g25580
gi|330252626|gb|AEC07720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 615
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 233/393 (59%), Gaps = 26/393 (6%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDV-FSSLL---DSCGNLKSIEMGKRVHELLRTSAF 159
+ CK GKV++A+ + D AS Y V S LL CG + ++ K VH + S
Sbjct: 228 AFCKHGKVKKALYTI--DILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVS 285
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ N+ L+EMY C A VF+++ ++NL +W ++I +A NG G D + +F +
Sbjct: 286 HLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSR 345
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++ G PD + F +F AC V EG L+FE M DYGI P IE Y++++++ G
Sbjct: 346 FKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPG 405
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK---- 335
L EA EFVERMP EP V+VWE L N +++HG++EL D E++ LDP++ ++K
Sbjct: 406 FLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR--LNKQSRE 463
Query: 336 --IPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREA 382
IP+ KK+S + K+ + ++R+ D E ++ ++ L M E
Sbjct: 464 GFIPVKASDVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEV 522
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GYV +TR LHDID+E+KE L HSER+A A ++++ PR P +IKNLR+C DCHNA+
Sbjct: 523 GYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNAL 582
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KIMS IVGRE+I RD KRFH ++G C+C DYW
Sbjct: 583 KIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 237/401 (59%), Gaps = 32/401 (7%)
Query: 107 KEGKVREAIE-YMGQDASASAGYDV-FSSLLDSCGNLKSIEMGKRVHELLRTS-AFVKDV 163
+ G EAI + D + D+ S++DSC L ++ +GKR+H +R+S +F + +
Sbjct: 313 QNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSL 372
Query: 164 ELNNKLIEMYGKCCNTRLARKVFD--QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
L N +I MYGKC N LAR+VF+ LR R++ +W MI YA NG G + + LF++M
Sbjct: 373 MLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEML 432
Query: 222 -KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
G P++ TFL V AC+ +++ + +F M D+G+ P +HY ++ +LG AG
Sbjct: 433 IDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGR 492
Query: 281 LIEAEEFVERMP-FEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-------- 331
L EAE+ + R FE V W A + Q++GD+E RA + + +L+P
Sbjct: 493 LGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSN 552
Query: 332 -------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKG 374
I +++ KK + + +E NRV ++ +D+ Y +++
Sbjct: 553 VYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELER 612
Query: 375 LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
L+ +++EAGYVPDT+ VL D+DEE K + L YHSERLA+A G+ISTPP LR++KNLR+
Sbjct: 613 LHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRV 672
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
C DCH A K +S+IVGR++IVRD RFHHF+DG CSCGDYW
Sbjct: 673 CSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD---VELNNKLIEMYGKCCNTRLAR 183
G + SLLD+C + + G H+ R +A D + L+ +YGKC AR
Sbjct: 233 GLPTYVSLLDACASTMDLRNGVAFHQ--RAAAIGLDRSSTVVAGTLVNLYGKCGRVDDAR 290
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+V D + R SW MI+ YA NG A+ + LF+ M G P T + V +CA
Sbjct: 291 RVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLG 350
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP-TVEVWEA 302
+ G +++ + A+I + G G+L A E E +P +V W A
Sbjct: 351 TLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTA 410
Query: 303 L-RNFAQ 308
+ R +AQ
Sbjct: 411 MIRAYAQ 417
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+ L +C +++ +G++++EL+ + A D + + LI MYG+C A + FD+
Sbjct: 136 LSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSP 195
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ W MIS YA N + + L L +M G T++ + ACAS ++ G
Sbjct: 196 EKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVA 255
Query: 251 YFEI-----MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + + +V G ++ + G G + +A ++ MP +V W A+
Sbjct: 256 FHQRAAAIGLDRSSTVVAG-----TLVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAM 307
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SLL C L + +++H + ++ L N L++ Y K + A+ F ++
Sbjct: 38 YASLLWQCRGLDEV---RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N SW+++++ YA NG LF M G P+ T AC +A + G
Sbjct: 95 LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154
Query: 251 YFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E++ ++ I+ ++ ++I + G + EAE +R P E V W A+
Sbjct: 155 LNELIASE---ALEIDSHVESSLITMYGRCREIEEAERAFDRSP-EKDVVCWTAM 205
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 216/372 (58%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L C N +++E+GK++H + S DV L N LI MY +C + + AR VF L
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP-DKETFLVVFAACASAEAVKEG 248
+ R++ SW MI G A G+ + LF QM+ G P D TF + +AC A V EG
Sbjct: 594 QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEG 653
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ F M+++YG++P IEHY ++ +LG A EAE + +MPF P VWE L +
Sbjct: 654 YQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACR 713
Query: 309 IHGDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR-------KKQSAT 347
IHG++ L + A LL ++ + D + R +K+
Sbjct: 714 IHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGR 773
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E N + ++ + D E Y ++K L+ +M EAGY PDT++VLHD+ + +E +
Sbjct: 774 SWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETS 833
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLAIAYGLI TPP P+RI KNLRICGDCH A K +SK+VGRE+I RD+ RFH
Sbjct: 834 LCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHS 893
Query: 464 FRDGKCSCGDYW 475
F++GKCSC DYW
Sbjct: 894 FKNGKCSCEDYW 905
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 24/308 (7%)
Query: 21 FNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGT- 79
F S IS VT + LL A+ TP+ + + + K + + GT
Sbjct: 217 FGQMSSEGISPDKVTY-----INLLDAFTTPS--MLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 80 --------GHSQNTNDPLRGNAQLESLDVNLL--SLCKEGKVREAIE--YMGQDASASAG 127
G + +G A + + N L +L + G EA E Y + +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ S+L++C K++E GK +H + DV++ N LI MY +C + AR++F
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ KR+L SW+ +I+GYA + + L++QM+ G P + TFL + +ACA++ A +
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G ++ +I+++ GI A++ + G L+EA+ E + W ++
Sbjct: 450 GKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-WNSMIAG 506
Query: 307 AQIHGDVE 314
HG E
Sbjct: 507 HAQHGSYE 514
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G RE + Q + +LL +C + + KR+H + + D+ L+N
Sbjct: 8 GPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNL 67
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI MY KC + A +VF ++ +R++ SW+ +IS YA G LFE+M+ G P+
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPN 127
Query: 229 KETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
K T++ + AC S ++ G ++ +I+K Y P +++ +++ + G G L A +
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQ 184
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q G F LL +C N + GK +HE + S + L N L+ MY +C +
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A+ VF+ + R++ SW+ MI+G+A +G LF++M+ PD TF V + C
Sbjct: 483 MEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542
Query: 240 ASAEAVKEG 248
+ EA++ G
Sbjct: 543 KNPEALELG 551
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C + +E GK++H + + + +D + N L+ MYGKC + AR+VF +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ S++ M+ YA + L LF QM G PDK T++ + A + + EG
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
>gi|4874299|gb|AAD31361.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 567
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 233/393 (59%), Gaps = 26/393 (6%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDV-FSSLL---DSCGNLKSIEMGKRVHELLRTSAF 159
+ CK GKV++A+ + D AS Y V S LL CG + ++ K VH + S
Sbjct: 180 AFCKHGKVKKALYTI--DILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVS 237
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ N+ L+EMY C A VF+++ ++NL +W ++I +A NG G D + +F +
Sbjct: 238 HLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSR 297
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++ G PD + F +F AC V EG L+FE M DYGI P IE Y++++++ G
Sbjct: 298 FKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPG 357
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK---- 335
L EA EFVERMP EP V+VWE L N +++HG++EL D E++ LDP++ ++K
Sbjct: 358 FLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR--LNKQSRE 415
Query: 336 --IPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREA 382
IP+ KK+S + K+ + ++R+ D E ++ ++ L M E
Sbjct: 416 GFIPVKASDVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEV 474
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GYV +TR LHDID+E+KE L HSER+A A ++++ PR P +IKNLR+C DCHNA+
Sbjct: 475 GYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNAL 534
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KIMS IVGRE+I RD KRFH ++G C+C DYW
Sbjct: 535 KIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 567
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 245/420 (58%), Gaps = 35/420 (8%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIE-YMGQDASASAGYDV-FSSLLDSCGNLKSIE 145
P+R + ++ + + + G EAI + D + D+ S++DSC L ++
Sbjct: 355 PVRTSVSWTAM---IAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLS 411
Query: 146 MGKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQ--LRKRNLSSWHLMIS 202
+GKR+H +R+S F + + L N +I MYGKC N LAR+VF+ LR R++ +W MI
Sbjct: 412 LGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIR 471
Query: 203 GYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
YA NG G + + LF++M G P++ TFL V +AC+ +++ + +F M D+G+
Sbjct: 472 AYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGV 531
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMP-FEPTVEVWEALRNFAQIHGDVELEDRAE 320
P +HY ++ +LG AG L EAE+ + R FE V W A + Q++GD+E RA
Sbjct: 532 PPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAA 591
Query: 321 ELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDY 359
+ + +L+P I +++ KK + + +E NRV ++
Sbjct: 592 KRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEF 651
Query: 360 RSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAY 415
+D+ Y +++ L+ +++EAGYVPDT+ VL D+DEE K + L YHSERLA+A
Sbjct: 652 MVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMAL 711
Query: 416 GLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
G+ISTPP LR++KNLR+C DCH A K +S+IVGR++IVRD RFHHF+DG CSCGDYW
Sbjct: 712 GIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V + L+ +YGKC AR+V D + R SW MI+ YA NG A+ + LF+
Sbjct: 325 VATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQC 384
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M G P T + V +CA + G +++ + A+I + G G
Sbjct: 385 MDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCG 444
Query: 280 HLIEAEEFVERMPFEP-TVEVWEAL-RNFAQ 308
+L A E E +P +V W A+ R +AQ
Sbjct: 445 NLELAREVFESVPLRTRSVVTWTAMIRAYAQ 475
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +C + + K +H+ + S + L N LI+++GKC + AR VF+++R
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N SW +I Y ++ + D LF+ M P D T+ ++ AA A + +
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSM----PGFDAFTWNIMIAAYARINRLDDARE 125
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGH--LIEAEEFVERMPFEPTVEVWEALRNFAQ 308
F +G++ G + I V G A H L EA RMP TV L+ +A
Sbjct: 126 LF------HGMISGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAH 179
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D N +I YGK LA +F Q++ RN +SW L++ YA NG F++M
Sbjct: 199 RDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRM 258
Query: 221 RKTGPHPDKETFLVVFA 237
P D F + A
Sbjct: 259 ----PQRDSIAFTAMTA 271
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 221/371 (59%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L++C S+E GK+ H S F + +++ L+ MY K N A +VF +
Sbjct: 496 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 555
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ MISGYA +G G L +FE+MR D TF+ V +AC A V EG
Sbjct: 556 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 615
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++M DY IVP +EHY ++ + AG L +A + + +MPF +W L ++
Sbjct: 616 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRV 675
Query: 310 HGDVELEDRAEELLGDLDPS--------------------KAIVDKI-PLPPRKKQSATN 348
H +V+L + A E L L P +A V K+ + KK++ +
Sbjct: 676 HLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 735
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN+ + + DL + Y K++ L+ ++++AGY PDT+YVLHD++EE KE L
Sbjct: 736 WIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVIL 795
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+GLI+TPP P++I+KNLR+CGDCH IK++SKI GR+++VRD+ RFHHF
Sbjct: 796 SQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHF 855
Query: 465 RDGKCSCGDYW 475
+ G CSCGDYW
Sbjct: 856 KGGSCSCGDYW 866
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S +L CG L +GK+VH FV+DV + L++MY K + +VFD++R
Sbjct: 95 LSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR 154
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N+ SW +++GY NG L LF QM+ G P+ TF V A+ AV++G
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F++++ C N+K + K++H + + D+ + L+ Y KC A K+F +
Sbjct: 296 IFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM 355
Query: 190 RK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N+ SW +ISGY NG+ + LF QMR+ G P+ T+ + A A AV
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA---AVSPS 412
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFA 307
++ ++K +Y P + A+ G EA + E + E + W A L +A
Sbjct: 413 QIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSGYA 469
Query: 308 QIHGDVE 314
Q+ GD+E
Sbjct: 470 QM-GDIE 475
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L ++E G +VH ++ S + + N ++ MY K A+ VFD +
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME 255
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
RN SW+ MI+G+ NG + LF +MR G + F V CA+
Sbjct: 256 NRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H L+ + + + L + Y K + A K+F+ + ++++ +W M+SGYA G
Sbjct: 413 QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMG 472
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+ +F Q+ K G P++ TF V ACA+ A E F G +
Sbjct: 473 DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVS 532
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A++ + G++ A E +R V + +AQ HG
Sbjct: 533 SALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQ-HG 574
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 223/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C L ++E+G +VH L + + +DV + N LI+MY KC + + AR +FD L
Sbjct: 352 YSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLD 411
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ SW+ +I GY+ +G G + + +F M++T PD+ TF+ V +AC++ + EG
Sbjct: 412 LRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF MK DYGI P +EHY ++ ++G +G+L +A +F+E +PFEP+V +W AL IH
Sbjct: 472 YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
DVEL + + + +L+P S ++ I R KK+ +
Sbjct: 532 NDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSW 591
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + D + + + G LN + R+AGY P VL D++++ KE+ L
Sbjct: 592 IENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLW 651
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+A+GL+ P P+RIIKNLRIC DCH+ IK++SKIVGR++IVRD RFHHF
Sbjct: 652 LHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFE 711
Query: 466 DGKCSCGDYW 475
+G CSC DYW
Sbjct: 712 NGSCSCADYW 721
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 113 EAIEYMGQDASASAGYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
EA+E+ Q AG+ F+ +L +C L++ + GK VH + + + +D+ +
Sbjct: 130 EALEFFSQ--MRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVG 187
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L+E+Y +C + A + F + K ++ W MIS +A +GQ L +F QMR+ P+
Sbjct: 188 LLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPN 247
Query: 229 KETFLVVFAACASAEAV 245
+ TF V A A E++
Sbjct: 248 QFTFSSVLQASADIESL 264
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+++L +++ E+G+ VH + + + + LI+ Y +AR+VFD++
Sbjct: 48 VFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEI 107
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+++ SW MI+ YA N ++ L F QMR G P+ TF V AC + G
Sbjct: 108 SSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGK 167
Query: 249 FLYFEIMKNDY 259
++ ++K +Y
Sbjct: 168 TVHCSVLKTNY 178
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L + +++S+++ K +H + DV ++N L+ Y KC + ++F+ L
Sbjct: 251 FSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALS 310
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
RN SW+ +I Y G G L LF M + + T+ + ACA+ A++ G
Sbjct: 311 DRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQ 370
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ K YG + + A+I + G + +A + + V W A+ +
Sbjct: 371 VHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDARFMFDMLDLRDKVS-WNAIICGYSM 427
Query: 310 HG 311
HG
Sbjct: 428 HG 429
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 225/376 (59%), Gaps = 25/376 (6%)
Query: 125 SAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
S+ FS L +C ++ ++E+GK+VH + + F + N L+ MY KC +T A
Sbjct: 388 SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAND 447
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
VF+ + ++++ SW+ MI+GYA +G G L+LFE M+K G PD+ T + V +AC+ +
Sbjct: 448 VFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGL 507
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ G YF M DY + P +HY +I +LG AG L EAE + MPF+P W AL
Sbjct: 508 IDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567
Query: 305 NFAQIHGDVELEDRAEELLGDLDP---------------SKAIVD------KIPLPPRKK 343
++IHG+ EL ++A E++ ++P S VD K+ +K
Sbjct: 568 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQK 627
Query: 344 QSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
+ + +E +N++ + D + E Y ++ L+ +MR GYV T+ VLHD++EE
Sbjct: 628 VTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 687
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KE L+YHSE+LA+A+G+++ P P+R++KNLR+C DCHNAIK +SKIVGR +I+RD+
Sbjct: 688 KEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSH 747
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF +G CSCGDYW
Sbjct: 748 RFHHFSEGICSCGDYW 763
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+++ N +I YG+ ARK+FD + +R+ SW +ISGYA NG + L +F +M
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
++ G ++ TF + CA A++ G
Sbjct: 383 KRDGESSNRSTFSCALSTCADIAALELG 410
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIE---------MYGKCCNTRL--ARKVFDQLRK 191
S+ + LR + F +L +K+ E + G N RL A K+FD + K
Sbjct: 77 SVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPK 136
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ SW+ M+SGYA NG + +F +M PH + ++ + AA +KE
Sbjct: 137 KDVVSWNAMLSGYAQNGFVDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARRL 192
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
FE N + ++ + ++ L +A + +RMP + + +AQ+
Sbjct: 193 FESQSN-WELIS----WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV-- 245
Query: 312 DVELEDRAEELLGDLDPSKAIVDKIPL 338
GDL +K + ++ P+
Sbjct: 246 ------------GDLSQAKRLFNESPI 260
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y + +A ++F+ + RN+SSW+ MI+GY NG A LF+ M P
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMM----PQ 353
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
D ++ + + A +E F MK D
Sbjct: 354 RDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+DV N +I Y + + A+++F++ R++ +W M+SGY NG + F++
Sbjct: 229 VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M P ++ ++ + A + + FE M I + +I G G
Sbjct: 289 M----PVKNEISYNAMLAGYVQYKKMVIAGELFEAMP-----CRNISSWNTMITGYGQNG 339
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ +A + + MP V + +AQ
Sbjct: 340 GIAQARKLFDMMPQRDCVSWAAIISGYAQ 368
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ NK I + + + A +VF+ + +R+ S++ MISGY N + + LF++M
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM- 103
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM-KNDYGIVPGIEHYIAIIKVLGSAGH 280
P D ++ V+ + E F++M K D + + A++ G
Sbjct: 104 ---PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKD------VVSWNAMLSGYAQNGF 154
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
+ EA E +MP ++ W L
Sbjct: 155 VDEAREVFNKMPHRNSIS-WNGL 176
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 224/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS L +C +L ++E G ++H L + F KD+ + N LI+MY KC + + AR VFD +
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 301
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K++ SW+ MISGY+ +G G + L +F++M++T PDK TF+ V +ACA+A + +G
Sbjct: 302 KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQA 361
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+GI P IEHY ++ +LG GHL +A + ++ +PF+P+V VW AL IH
Sbjct: 362 YFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421
Query: 311 GDVEL-------------EDRAEELLGD--------LDPSKAIVDKIPLPPRKKQSATNM 349
D+EL +D+A +L D ++ + KK+ +
Sbjct: 422 NDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSW 481
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + D E + G L+ + ++AGY+P+ VL D+++E KE+ L
Sbjct: 482 IESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLW 541
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+++G+I TP P+RI+KNLRIC DCH AIK +SK+V RE++VRD RFHHF+
Sbjct: 542 VHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQ 601
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 602 EGLCSCGDYW 611
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L +C ++ + +G ++H + DV ++N L+++Y KC + ++F +
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 200
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN +W+ +I G+ G G L LF M + + T+ ACAS A++ G
Sbjct: 201 HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGL 259
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYG 174
E++G + + +++ L C GK +H E+L+ + D+ N L+ MY
Sbjct: 26 EFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCL-DLFAWNILLNMYV 84
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
K A K+FD++ +RN S+ +I GYA + + + + LF ++ + P++ TF
Sbjct: 85 KSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFAS 143
Query: 235 VFAACASAEAVKEG 248
V ACA+ E + G
Sbjct: 144 VLQACATMEGLNLG 157
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 222/371 (59%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ +L +C ++ ++E G ++H L + + + N L+ MY KC N AR F+++
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ SW+ MI+GYA +G G + L +F+ MR T PD T + V AAC+ + V++G
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M +D+G+ EHY +I +LG AG L EA + ++ MPFEP +W AL ++I
Sbjct: 505 SYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRI 564
Query: 310 HGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM---------------- 349
H + EL A E + +L+P A ++ I K + A M
Sbjct: 565 HRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFS 624
Query: 350 -LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N+V + + D E EK ++ L+ +M++AGYV T VLHD++EE KE L
Sbjct: 625 WIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHML 684
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+AYG+++ PP P+R+IKNLR+CGDCHNA K +S I GR +++RD+ RFHHF
Sbjct: 685 KYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHF 744
Query: 465 RDGKCSCGDYW 475
R G CSCGDYW
Sbjct: 745 RGGSCSCGDYW 755
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N ++ Y + A+ VFD + +++ SW M++ Y+ G + L LF +M
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ G ++ F V + CA A++ G L+ +++ YG+ + + A++ + G
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCG 432
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ +A E M E V W + HG
Sbjct: 433 NMEDARNAFEEME-ERDVVSWNTMIAGYARHG 463
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ Y + AR++FD++ R++ SW++M+SGYA G + LF+ P
Sbjct: 197 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD----AAPV 252
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
D T+ V + A ++E F+ M + + A++ + EA+E
Sbjct: 253 RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKE 307
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
MP L +AQ G L+ +KA+ D +P
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQA--------------GMLEEAKAVFDTMP 344
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV N ++ Y + + AR++FD R++ +W ++SGYA NG + +F+ M
Sbjct: 222 RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + AA + E F +M + + ++ AG
Sbjct: 282 ----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGM 332
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
L EA+ + MP + V W A+
Sbjct: 333 LEEAKAVFDTMPQKDAVS-WAAM 354
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 220/370 (59%), Gaps = 28/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C +L S++ GK+VH L S F +D+ + + LI MY KC N A++VF++ +
Sbjct: 343 SVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK 402
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ MI+GY+ +G G + L +F M +G PD TF+ V +AC+ + VKEG F
Sbjct: 403 DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF 462
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E MK Y + PGIEHY ++ +LG A + EA + VE+MP EP VW AL + H
Sbjct: 463 ETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMK 522
Query: 313 VELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLE 351
++L + A E L L+P A + +KI K + +E
Sbjct: 523 LDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIE 582
Query: 352 EKNRVSDYRSTDLYRGEYEK------MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ +V + D +G E+ ++ L G +REAGY PD +VLHD+DEE K +L
Sbjct: 583 VEKKVHMFTGGD-SKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLG 641
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYGL+ P MP+R++KNLR+CGDCH+AIK+++K+ GRE+I+RD RFHHF+
Sbjct: 642 YHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFK 701
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 702 DGHCSCKDYW 711
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VK V + N++I +G AR+VF +++R+ +W MI Y G + L LF +
Sbjct: 269 VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRR 328
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIA--IIKVLG 276
M++ G + + + V + C S ++ G ++ +++++++ + Y+A +I +
Sbjct: 329 MQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF----DQDLYVASVLITMYV 384
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G+L+ A++ R P + V +W ++ HG
Sbjct: 385 KCGNLVRAKQVFNRFPLKDVV-MWNSMITGYSQHG 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+VFD + RN+ SW M+ GY NG A+ LF M PH + ++ V+
Sbjct: 105 ARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM----PHKNVVSWTVMLGGLLQ 160
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS---AGHLIEAEEFVERMPFEPTVE 298
V + F++M + +A+ ++G G L EA + MP + V
Sbjct: 161 EGRVDDARKLFDMMPE--------KDVVAVTNMIGGYCEEGRLDEARALFDEMP-KRNVV 211
Query: 299 VWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML 350
W A+ + +G V++ + E+ +P R + S T ML
Sbjct: 212 TWTAMVSGYARNGKVDVARKLFEV---------------MPERNEVSWTAML 248
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 174 GKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
G C RL AR +FD++ KRN+ +W M+SGYA NG+ LFE M
Sbjct: 188 GYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVM 236
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 22/195 (11%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR-----LARKVFDQ--LRKRNLSSWH 198
MG +LR ++ V L Y C R ARKVFD+ L R +SSW+
Sbjct: 1 MGHSGRAILRRCMMLQ-VRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWN 59
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
M++ Y Q + L+LFE+M P + ++ + + + E F+ M D
Sbjct: 60 AMVAAYFEARQPREALLLFEKM----PQRNTVSWNGLISGHIKNGMLSEARRVFDTMP-D 114
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDR 318
+V + ++++ G + EAE MP + V W + G V D
Sbjct: 115 RNVVS----WTSMVRGYVRNGDVAEAERLFWHMPHKNVVS-WTVMLGGLLQEGRV---DD 166
Query: 319 AEELLGDLDPSKAIV 333
A +L D+ P K +V
Sbjct: 167 ARKLF-DMMPEKDVV 180
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 221/371 (59%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L++C S+E GK+ H S F + +++ L+ MY K N A +VF +
Sbjct: 400 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 459
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ MISGYA +G G L +FE+MR D TF+ V +AC A V EG
Sbjct: 460 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 519
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++M DY IVP +EHY ++ + AG L +A + + +MPF +W L ++
Sbjct: 520 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRV 579
Query: 310 HGDVELEDRAEELLGDLDPS--------------------KAIVDKI-PLPPRKKQSATN 348
H +V+L + A E L L P +A V K+ + KK++ +
Sbjct: 580 HLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 639
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN+ + + DL + Y K++ L+ ++++AGY PDT+YVLHD++EE KE L
Sbjct: 640 WIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVIL 699
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+GLI+TPP P++I+KNLR+CGDCH IK++SKI GR+++VRD+ RFHHF
Sbjct: 700 SQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHF 759
Query: 465 RDGKCSCGDYW 475
+ G CSCGDYW
Sbjct: 760 KGGSCSCGDYW 770
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S +L CG L +GK+VH FV+DV + L++MY K + +VFD++R
Sbjct: 95 LSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR 154
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N+ SW +++GY NG L LF QM+ G P+ TF V A+ AV++G
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F++++ C N+K + K++H + + D+ + L+ Y KC A K+F +
Sbjct: 296 IFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM 355
Query: 190 RK-RNLSSWHLMISGYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVKE 247
+N+ SW +ISGY NG+ + LF QMR+ G P++ TF V ACA+ A E
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVE 415
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F G + A++ + G++ A E +R V + +A
Sbjct: 416 QGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475
Query: 308 QIHG 311
Q HG
Sbjct: 476 Q-HG 478
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L ++E G +VH ++ S + + N ++ MY K A+ VFD +
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME 255
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
RN SW+ MI+G+ NG + LF +MR G + F V CA+ + +
Sbjct: 256 NRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQ 315
Query: 250 LYFEIMKN 257
L+ +++KN
Sbjct: 316 LHCQVIKN 323
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 222/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ +L +C ++ ++E G ++H L + + + N L+ MY KC N AR F+++
Sbjct: 386 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 445
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ SW+ MI+GYA +G G + L +F+ MR T PD T + V AAC+ + V++G
Sbjct: 446 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M +D+G+ EHY +I +LG AG L EA + ++ MPFEP +W AL ++IH
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM----------------- 349
+ EL A E + +L+P A ++ I K + A M
Sbjct: 566 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 625
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + + D E EK ++ L+ +M++AGYV T VLHD++EE KE L+
Sbjct: 626 IEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLK 685
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYG+++ PP P+R+IKNLR+CGDCHNA K +S I GR +++RD+ RFHHFR
Sbjct: 686 YHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFR 745
Query: 466 DGKCSCGDYW 475
G CSCGDYW
Sbjct: 746 GGSCSCGDYW 755
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N ++ Y + A+ VFD + +++ SW M++ Y+ G + L LF +M
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ G ++ F V + CA A++ G L+ +++ YG+ + + A++ + G
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCG 432
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ +A E M E V W + HG
Sbjct: 433 NMEDARNAFEEME-ERDVVSWNTMIAGYARHG 463
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV N L+ Y + AR++FD++ R++ SW++M+SGYA G + LF+
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD--- 248
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P D T+ V + A ++E F+ M + + A++ +
Sbjct: 249 -AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMM 302
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
EA+E MP L +AQ G L+ +KA+ D +P
Sbjct: 303 DEAKELFNMMPCRNVASWNTMLTGYAQA--------------GMLEEAKAVFDTMP 344
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV N ++ Y + + AR++FD R++ +W ++SGYA NG + +F+ M
Sbjct: 222 RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + AA + E F +M + + ++ AG
Sbjct: 282 ----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGM 332
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
L EA+ + MP + V W A+
Sbjct: 333 LEEAKAVFDTMPQKDAVS-WAAM 354
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 226/370 (61%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C +L ++E+G ++H L + + KDV + N LI+MY KC + + AR VFD L
Sbjct: 347 YSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLS 406
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+ SW+ MISGY+ +G + L F+ M++T P+K TF+ + +AC++A + G
Sbjct: 407 ERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQN 466
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M DYGI P +EHY ++ +LG +GHL +A + +E +P EP V+VW AL IH
Sbjct: 467 YFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
DV+L + + + +DP + ++ I R KK+ +
Sbjct: 527 NDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSW 586
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + D + + + G LN + +AGYVPD VL D++++ K++ L
Sbjct: 587 IENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLW 646
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+A+GLI TP R +RI+KNLRIC DCH+AIK++SKIV R++I+RD RFHHF+
Sbjct: 647 VHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQ 706
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 707 DGICSCGDYW 716
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 84 NTNDPLRGNAQLESLDVNLLSL-----CKEGKVREAIEYMGQ--DASASAGYDVFSSLLD 136
+ ND LR ++ DV S + + REA+E GQ A F+S+L
Sbjct: 192 DANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQ 251
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SC +++++++GK+VH + +V ++N L+++Y KC + K+F +L RN +
Sbjct: 252 SCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVT 311
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
W+ MI GY +G G L L++ M + + T+ V ACAS A++ G
Sbjct: 312 WNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG 363
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ +L +C L++ +GK VH + + + D+ + L+++Y K + +VF+++
Sbjct: 145 FAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K ++ W MIS YA + Q + + LF QMR+ P++ TF V +CAS E ++ G
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLG 262
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+++L +++ E+ +H + + + LI+ Y C + AR+ FD +
Sbjct: 43 VFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAI 102
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW M++ YA N + D L LF +MR G +P+ TF V AC EA G
Sbjct: 103 ACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVG 161
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 222/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ +L +C ++ ++E G ++H L + + + N L+ MY KC N AR F+++
Sbjct: 261 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 320
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ SW+ MI+GYA +G G + L +F+ MR T PD T + V AAC+ + V++G
Sbjct: 321 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 380
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M +D+G+ EHY +I +LG AG L EA + ++ MPFEP +W AL ++IH
Sbjct: 381 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 440
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM----------------- 349
+ EL A E + +L+P A ++ I K + A M
Sbjct: 441 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 500
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + + D E EK ++ L+ +M++AGYV T VLHD++EE KE L+
Sbjct: 501 IEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLK 560
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYG+++ PP P+R+IKNLR+CGDCHNA K +S I GR +++RD+ RFHHFR
Sbjct: 561 YHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFR 620
Query: 466 DGKCSCGDYW 475
G CSCGDYW
Sbjct: 621 GGSCSCGDYW 630
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N ++ Y + A+ VFD + +++ SW M++ Y+ G + L LF +M
Sbjct: 190 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 249
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ G ++ F V + CA A++ G L+ +++ YG+ + + A++ + G
Sbjct: 250 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCG 307
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ +A E M E V W + HG
Sbjct: 308 NMEDARNAFEEME-ERDVVSWNTMIAGYARHG 338
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV N L+ Y + AR++FD++ R++ SW++M+SGYA G + LF+
Sbjct: 67 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD--- 123
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P D T+ V + A ++E F+ M + + A++ +
Sbjct: 124 -AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMM 177
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
EA+E MP L +AQ G L+ +KA+ D +P
Sbjct: 178 DEAKELFNMMPCRNVASWNTMLTGYAQA--------------GMLEEAKAVFDTMP 219
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV N ++ Y + + AR++FD R++ +W ++SGYA NG + +F+ M
Sbjct: 97 RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 156
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + AA + E F +M + + ++ AG
Sbjct: 157 ----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGM 207
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
L EA+ + MP + V W A+
Sbjct: 208 LEEAKAVFDTMPQKDAVS-WAAM 229
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 233/412 (56%), Gaps = 27/412 (6%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGK 148
N L S +V + EA++ Q + D S S+L +CG+L ++ +G+
Sbjct: 267 ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 326
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
R+HE + ++ L N LI+MY KC AR+VFDQ++ R++ SW MIS Y NG
Sbjct: 327 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 386
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+G D + LF +M+ G +PD F+ V +AC+ A + EG YF++M + IVP IEH+
Sbjct: 387 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHF 446
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
+ ++ +LG AG + EA F+++MP EP VW AL + +++ ++ + A + L L P
Sbjct: 447 VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCP 506
Query: 329 SKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRG 367
++ + + KK + E NRV + + D
Sbjct: 507 EQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHP 566
Query: 368 E----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPR 423
+ YE++ G+M+EAGYVP+T LHD++EE KE L HSE+LAIA+ +++T P
Sbjct: 567 QSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPG 626
Query: 424 MPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+RI KNLR+CGDCH A K++SKIVGRE+ +RD RFHHF +G CSCGDYW
Sbjct: 627 SPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L + + + +G ++H + +V + N LI MYGKC A +V DQ+
Sbjct: 140 YPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMP 199
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-----SAEAV 245
R++ SW+ +++G A NGQ D L + ++M G PD T + A + V
Sbjct: 200 CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFV 259
Query: 246 KEGFL 250
KE F+
Sbjct: 260 KEMFM 264
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L KL+ Y C R +FD++ K+N+ +++MI Y N +D L++F+ M G
Sbjct: 73 LGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG 132
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD T+ V A + +E + G ++ +++ G+ + +I + G G L+E
Sbjct: 133 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR--VGLDLNVFVGNGLISMYGKCGCLVE 190
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A +++MP V W +L
Sbjct: 191 ACRVLDQMPCRDVVS-WNSL 209
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N +++F +L ++L SW++MI+ Y N A+ + +F QM PD + V
Sbjct: 255 NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLP 314
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC A+ G E + + P + A+I + G L A E ++M F V
Sbjct: 315 ACGDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV 373
Query: 298 EVWEALRNFAQIHGD----VELEDRAEEL 322
W ++ + ++G V L R ++L
Sbjct: 374 S-WTSMISAYGMNGKGRDAVSLFSRMQDL 401
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 225/403 (55%), Gaps = 28/403 (6%)
Query: 101 NLLSLC-KEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
++++ C + GK EA+E+ Q +L + N+ ++ G+ H
Sbjct: 263 SIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRK 322
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F+ DV +++ L++MY KC + AR +FD + RN+ SW+ MI GYA G+ + + +F
Sbjct: 323 GFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMF 382
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
M K PD TF + AAC A +EG YF+ M N+YG+ P +EHY ++ +LG
Sbjct: 383 HSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGR 442
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------- 328
AG L EA + + MPFEP +W +L ++HG+V+L + A E L L+P
Sbjct: 443 AGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLL 502
Query: 329 -----SKAIVDKIPLPPR-------KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKM 372
SK + D++ KK+ + +E KN+V + D + EK+
Sbjct: 503 SNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKI 562
Query: 373 KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNL 432
LN QMR+ G+VP T +VLHD++E+ K+ L HSE+LA+A GLIST P LR+IKNL
Sbjct: 563 NQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNL 622
Query: 433 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
RICGDCH A+K +S GRE+ VRD RFHHF GKCSCGD+W
Sbjct: 623 RICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L + G++ + +G+++H + D + LI+MYGKC +VFD+
Sbjct: 161 SCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSH 220
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++S + +I+G + N Q + L LF++ G + ++ + A C E +
Sbjct: 221 MDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEF 280
Query: 252 FEIMK 256
F M+
Sbjct: 281 FREMQ 285
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 222/368 (60%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C +L S++ G++VH L S F +D+ + + LI MY KC + A+ +F++ +
Sbjct: 340 SVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK 399
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ MI+GY+ +G G + L +F M +G PD+ TF+ V +AC+ + VKEGF F
Sbjct: 400 DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIF 459
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E MK Y + PGIEHY ++ +LG AG + EA E VE+MP EP VW AL + H
Sbjct: 460 EAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMK 519
Query: 313 VELEDRAEELLGDLDPSKA---IVDKIPLPPRKKQSATNMLEEK--NRVSDY-------- 359
++L + A E L L+P A ++ + + +L +K RV +
Sbjct: 520 LDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGCSWIEV 579
Query: 360 -RSTDLYRGEYEK-----------MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+ ++ G K ++ L+G +REAGY PD +VLHD+DEE K +L YH
Sbjct: 580 EKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYH 639
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLA+AYGL+ P MP+R++KNLR+CGDCH+AIK+++K+ GRE+I+RD RFHHF+DG
Sbjct: 640 SERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDG 699
Query: 468 KCSCGDYW 475
CSC D+W
Sbjct: 700 SCSCKDFW 707
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KDV + +I Y + AR++FD+++ RN+ +W M+SGYA NG+ LFE M
Sbjct: 174 KDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM 233
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P ++ ++ + + +KE F FE M + IV E +I G AG
Sbjct: 234 ----PERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKW-IVACNE----MILQFGLAGE 284
Query: 281 LIEAEEFVERMPFEPTVE----VWEAL 303
+ A RM FE E W A+
Sbjct: 285 MHRA-----RMMFEGMKERDEGTWNAM 306
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 27/187 (14%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
N I YG+ + ARKVFD L +R ++SW+ M+S Y + + D L+LF+QM
Sbjct: 22 NTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM--- 78
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P + +F + + V + F++M + + ++++ G + E
Sbjct: 79 -PQRNTVSFNGMISGYVKNGMVADARKVFDVMPER-----NVVSWTSMVRGYVQEGMVEE 132
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKK 343
AE+ MP V ++ + G + E R +D +K + D I P +
Sbjct: 133 AEKLFWEMPRRNVV-------SWTVMIGGLLKESR-------IDDAKKLFDMI--PEKDV 176
Query: 344 QSATNML 350
TNM+
Sbjct: 177 VVVTNMI 183
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V++V ++ Y K +ARK+F+ + +RN SW M+ GY +G+ + LFE
Sbjct: 204 VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEA 263
Query: 220 M 220
M
Sbjct: 264 M 264
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y K ARKVFD + +RN+ SW M+ GY G + LF +M P
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM----PR 142
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS---AGHLIE 283
+ ++ V+ + + K + ++P + + + ++G G L E
Sbjct: 143 RNVVSWTVMIGGLLKESRIDDA-------KKLFDMIPE-KDVVVVTNMIGGYCQVGRLDE 194
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKK 343
A E + M V W + + +G V++ + E+ +P R +
Sbjct: 195 ARELFDEMKVR-NVFTWTTMVSGYAKNGRVDVARKLFEV---------------MPERNE 238
Query: 344 QSATNML 350
S T ML
Sbjct: 239 VSWTAML 245
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 218/372 (58%), Gaps = 29/372 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C L +E+GK VH L + V ++ + + L++MYGKC + A + FD++ +
Sbjct: 213 SSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE 272
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH---PDKETFLVVFAACASAEAVKEG 248
RNL +W+ MI GYA GQ + LF++M G H P+ TF+ V +AC+ A +V G
Sbjct: 273 RNLVTWNAMIGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVG 331
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
FE M+ YGI PG EHY ++ +LG AG + +A +F+++MP PTV VW AL ++
Sbjct: 332 MEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASK 391
Query: 309 IHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSAT 347
+ G EL A + L +LDP + + ++ KK +
Sbjct: 392 MFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGC 451
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ + N V +++ D +++ L G+M AGY+PDT + L D++EE K
Sbjct: 452 SWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAME 511
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ YHSE++A+A+GLIS P +P+RI KNLRICGDCH+AIK +S IVGRE+IVRDN FH
Sbjct: 512 VWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHR 571
Query: 464 FRDGKCSCGDYW 475
FRD +CSC DYW
Sbjct: 572 FRDNQCSCRDYW 583
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + G+L+S +GK+VH L + + DV + +MY K T ARK+FD++
Sbjct: 111 FPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+++W+ +S G+ D L F + RK G P V +ACA ++ G
Sbjct: 171 ERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVG-K 229
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +V I A++ + G G + +AE + MP E + W A+
Sbjct: 230 SVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAM 281
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 3/182 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SL++S + + +G+ H ++++T + N L+ MY K A+ +
Sbjct: 9 LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLT 68
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ +W +I+G NG+ L F MR+ P+ TF F A S + G
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG- 127
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ G + + + + AG EA + + MP E + W A + + +
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNAYLSNSVL 186
Query: 310 HG 311
G
Sbjct: 187 EG 188
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 214/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L++C + ++E GKRVH + DV + LI MY KC + A++VFD
Sbjct: 792 FVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFT 851
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ +W+ MI+ YA +G + L F M K G PD TF + +AC + V EG
Sbjct: 852 EKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNR 911
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +++ +G+ P IEHY ++ +LG AG EAE + +MPF P VWE L +IH
Sbjct: 912 IFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIH 971
Query: 311 GDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
G+V L + A LL ++ + D + R +K+ +
Sbjct: 972 GNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSW 1031
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E N + ++ + D E YE++K L+ +M AGY PDT+YVLH++D+E +E +L
Sbjct: 1032 IEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLC 1091
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAIAYGL+ TPP P+RI KNLRICGDCH A K +SK+VGRE+I RD+ RFH F+
Sbjct: 1092 THSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFK 1151
Query: 466 DGKCSCGDYW 475
+GKCSC D+W
Sbjct: 1152 NGKCSCEDFW 1161
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L C N +++E+G+++H L+ S DV L N LI MY +C + + A +VF L
Sbjct: 589 TFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
R RN+ SW MI G+A G+ LF QM+ G P K TF + AC S+ + EG
Sbjct: 649 RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGK 708
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ I+ + Y + G+ + A+I +G + +A + ++MP + + + +AQ
Sbjct: 709 KVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQ 766
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)
Query: 108 EGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
+G+ R+A E + Q+ FSS+L +C + ++ GK+V + S + D +
Sbjct: 666 QGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGV 725
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N LI Y K + ARKVFD++ R++ SW+ MI+GYA NG G L QM++ G
Sbjct: 726 GNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGV 785
Query: 226 HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
+K +F+ + AC+S A++EG ++ EI+K + + A+I + G L EA
Sbjct: 786 VLNKFSFVSILNACSSFSALEEGKRVHAEIVKRK--MQGDVRVGAALISMYAKCGSLEEA 843
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
+E + E V W A+ N HG L +A + +D
Sbjct: 844 QEVFDNFT-EKNVVTWNAMINAYAQHG---LASKALDFFNCMD 882
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 6/216 (2%)
Query: 102 LLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+ +L + G EA E Y + + S+L++C K++ G+ +H +
Sbjct: 357 IAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH 416
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
DV++ N LI MY +C + AR++F+ + KR+L SW+ +I+GYA + + L++Q
Sbjct: 417 SSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQ 476
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M+ G P + TFL + +AC ++ A +G ++ +I+++ GI A++ +
Sbjct: 477 MQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS--GIKSNGHLANALMNMYRRC 534
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G ++EA+ E + W ++ HG E
Sbjct: 535 GSIMEAQNVFEGTRARDIIS-WNSMIAGHAQHGSYE 569
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q G F LL +C N + GK +HE + S + L N L+ MY +C +
Sbjct: 478 QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSI 537
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A+ VF+ R R++ SW+ MI+G+A +G LF +M+K G PDK TF V C
Sbjct: 538 MEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC 597
Query: 240 ASAEAVKEG 248
+ EA++ G
Sbjct: 598 KNPEALELG 606
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G RE + Q + L+ +C +S+ KR+H + + D+ L+N
Sbjct: 63 GSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNL 122
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI MY KC + A +VF ++ +R++ SW+ +IS YA G LFE+M+ G P
Sbjct: 123 LINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182
Query: 229 KETFLVVFAACASAEAVKEG 248
K T++ + AC S ++ G
Sbjct: 183 KITYISILTACCSPAELEYG 202
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C + +E GK++H + + + +D + N L+ MYGKC + AR+VF +
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ S++ M+ YA + + LF QM G PDK T++ + A + + EG
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ N+ G+ I A+ + G + A++ +E + V V+ AL
Sbjct: 305 RIHKLAVNE-GLNSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQ 362
Query: 310 HGDVE 314
HG E
Sbjct: 363 HGHYE 367
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++ V E I GQ +S D + +LLD+ ++ GKR+H+L D+
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L M+ +C + A++ + R++ ++ +I+ A +G + + QMR G
Sbjct: 321 VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDG 380
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
++ T+L V AC++++A+ G L + ++ G ++ ++I + G L A
Sbjct: 381 VVMNRTTYLSVLNACSTSKALGAGELIHSHI-SEVGHSSDVQIGNSLISMYARCGDLPRA 439
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL 322
E MP + W A+ I G EDR E +
Sbjct: 440 RELFNTMPKRDLIS-WNAI-----IAGYARREDRGEAM 471
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 218/372 (58%), Gaps = 29/372 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C L +E+GK VH L + V ++ + + L++MYGKC + A + FD++ +
Sbjct: 314 SSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE 373
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH---PDKETFLVVFAACASAEAVKEG 248
RNL +W+ MI GYA GQ + LF++M G H P+ TF+ V +AC+ A +V G
Sbjct: 374 RNLVTWNAMIGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVG 432
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
FE M+ YGI PG EHY ++ +LG AG + +A +F+++MP PTV VW AL ++
Sbjct: 433 MEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASK 492
Query: 309 IHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSAT 347
+ G EL A + L +LDP + + ++ KK +
Sbjct: 493 MFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGC 552
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ + N V +++ D +++ L G+M AGY+PDT + L D++EE K
Sbjct: 553 SWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAME 612
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ YHSE++A+A+GLIS P +P+RI KNLRICGDCH+AIK +S IVGRE+IVRDN FH
Sbjct: 613 VWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHR 672
Query: 464 FRDGKCSCGDYW 475
FRD +CSC DYW
Sbjct: 673 FRDNQCSCRDYW 684
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L++C + +G+++H + S F DV + N LI+ YGKC + +F +
Sbjct: 212 FCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS 271
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K N SW MI Y N + ++F + RK G P V +ACA ++ G
Sbjct: 272 KPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVG-K 330
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +V I A++ + G G + +AE + MP E + W A+
Sbjct: 331 SVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAM 382
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + G+L+S +GK+VH L + + DV + +MY K T ARK+FD++
Sbjct: 111 FPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RN+++W+ +S G+ D L F + R G P+ TF ACA A ++ G
Sbjct: 171 ERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLG 228
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 3/182 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SL++S + + +G+ H ++++T + N L+ MY K A+ +
Sbjct: 9 LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLT 68
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ +W +I+G NG+ L F MR+ P+ TF F A S + G
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG- 127
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ G + + + + AG EA + + MP E + W A + + +
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNAYLSNSVL 186
Query: 310 HG 311
G
Sbjct: 187 EG 188
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 218/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L C NL ++ +G+++H+L+ S KD LI MY KC + A K+F ++
Sbjct: 298 LSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP 357
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ SW+ MISGYA +G G L LF++MR PD TF+ V AC A V G
Sbjct: 358 RKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ MK ++GI HY +I +LG AG L EA ++ MPF+P ++ L +IH
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIH 477
Query: 311 GDVELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSAT--NMLEEKNRVS------ 357
+++L + A L +LDP+ A + + + Q A M++E N V
Sbjct: 478 KNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSW 537
Query: 358 --------DYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++RS+D E ++K+ L+G+M+ AGYVPD + LHD++EE KEK L
Sbjct: 538 IEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLL 597
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GL+ T P P+R+ KNLR+CGDCH AIK +S I RE+IVRD RFHHFR
Sbjct: 598 WHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFR 657
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 658 NGFCSCGDYW 667
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA-ANGQGADGLMLFEQM 220
DV NK I + + C+ AR VF+++ R +W+ M+SGY G+ + LF+++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P PD ++ ++ + V+ +F M V I + +I G
Sbjct: 132 ----PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMP-----VKDIASWNTLISGFAQNGQ 182
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD 334
+ +A + MP + V W A+ + HGD+E AEEL ++ +V+
Sbjct: 183 MQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLE---AAEELYKNVGMKSVVVE 232
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 115 IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-------ELLRTSAFVKDVELNN 167
I Q+ +D+FS + + G S + V E L + +K V +
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVET 233
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
++ Y K LA ++F ++ +NL +W+ MI+GY N + DGL +F+ M ++ P
Sbjct: 234 AMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRP 293
Query: 228 DKETFLVVFAACASAEAVKEG 248
+ + V C++ A+ G
Sbjct: 294 NPLSLSSVLLGCSNLSALPLG 314
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 219/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C N +++ GK +H + + D+ + N L+ MY KC + A +V + +
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ +I G A NG+G + L FE M+ P+ TF+ V +AC V+EG
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRR 570
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M+ DYGIVP +HY ++ +L AGHL EAE+ + MPF+P+ +W AL + H
Sbjct: 571 QFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAH 630
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIP--LPPR--KKQSATNM 349
G+VE+ ++A E L+P A V K+ + R KK+ +
Sbjct: 631 GNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSW 690
Query: 350 LEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E V + + D R E Y +++ L Q++ GYVPDTR+V+HD+D+E KE+A+
Sbjct: 691 IEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVC 750
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIAYGLISTPP P+R+ KNLR+C DCH A K +SKI GRE+I RD RFHHF+
Sbjct: 751 HHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFK 810
Query: 466 DGKCSCGDYW 475
+G+CSCGDYW
Sbjct: 811 NGECSCGDYW 820
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
+ ++Y+ Q S YD + LL SC K + +GK+VHE + +V + N L+++
Sbjct: 30 DVLQYLHQKGSQVDSYD-YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL 88
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
Y C + AR++FD+ +++ SW++MISGYA G G + LF M++ G PDK TF
Sbjct: 89 YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148
Query: 233 LVVFAACASAEAVKEG 248
+ + +AC+S A+ G
Sbjct: 149 VSILSACSSPAALNWG 164
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++L +CG+L ++E GK++H + S DV ++ L +MY KC + AR+VF+ L
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R++ +W+ MI G +GQ + +F +M K PD+ T+L + +ACA + G
Sbjct: 309 NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKE 368
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +K+ G+V + A+I + AG + +A + +RMP V W AL
Sbjct: 369 IHARAVKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS-WTAL 419
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +C + ++ G+ VH + + + + N LI MY KC + R AR+VFD +
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R+ SW + YA +G + L + M + G P + T++ V +AC S A+++G
Sbjct: 208 SRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQ 267
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
++ +I+++++ + A+ K+ G + +A E E +P
Sbjct: 268 IHAQIVESEHH--SDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++L +C + GK +H V DV N LI MY K + + AR+VFD++
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
KR++ SW ++ GYA GQ + F++M + G +K T++ V AC++ A+K G
Sbjct: 410 KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKE 469
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ E++K GI + A++ + G + +A E M V W L
Sbjct: 470 IHAEVVKA--GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVV-TWNTL 520
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 215/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L C NL ++++GK+VH+L+ S ++ L+ MY KC + A K+F +
Sbjct: 230 LSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP 289
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ +W+ MISGYA +G G L LF++MR G PD TF+ V +AC A V G
Sbjct: 290 QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIE 349
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M DYG+ +HY ++ +LG G L+EA + +++MPF+P ++ L +IH
Sbjct: 350 YFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIH 409
Query: 311 GDVELEDRAEELLGDLDPSKAI--------------VDKIPLPPRK-------KQSATNM 349
++EL + A + L +LDP A D + + R K +
Sbjct: 410 KNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSW 469
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K+ V ++RS D E +EK+ L +MR AGYVPD Y LHD+ EE K++ L
Sbjct: 470 IEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILL 529
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIAYGLI P P+R+ KNLR+CGDCH+A K +S I GR +IVRD RFHHFR
Sbjct: 530 RHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFR 589
Query: 466 DGKCSCGDYW 475
G+CSCGDYW
Sbjct: 590 QGECSCGDYW 599
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+++ K++ E+ A V+ V +I + K LA K F+++ +NL +W+ MI+G
Sbjct: 146 LDLAKQLFEV----APVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAG 201
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKN---DYG 260
Y N Q +GL LF++M ++G P+ + V C++ A+K G +++ +
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I G +++ + G L +A + MP + V W A+ + HG
Sbjct: 262 ITAG----TSLLSMYCKCGDLEDAWKLFLVMP-QKDVVTWNAMISGYAQHG 307
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 22/148 (14%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ N ++ Y + AR FDQ+ ++ +SW+ MISG++ NG + +Q R
Sbjct: 67 DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNG-------MMDQAR 119
Query: 222 KTGPHPDKETFLVV-FAACASAEAVKEGFLY---FEIMKNDYGIVP--GIEHYIAIIKVL 275
E FLV+ S A+ G++ ++ K + + P + + A+I
Sbjct: 120 --------ELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGF 171
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + AE++ E MP + V W A+
Sbjct: 172 MKFGKIELAEKYFEEMPMKNLV-TWNAM 198
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 222/371 (59%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C +L ++E+G++ H + S F D+ + + L++MY K + A +VFD++
Sbjct: 144 IMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKM 203
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW+ +I+G A +G+G D ++LFEQM + G P++ +F+ V +AC+ V EG
Sbjct: 204 PQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGR 263
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +M +YGIVP + HY +I +LG AG L EAE F+ MP EP V VW AL +I
Sbjct: 264 GYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRI 323
Query: 310 HGDVELEDR-AEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATN 348
HG+ EL R AE LL G D + + + KQ +
Sbjct: 324 HGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYS 383
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K + + + + + +E ++ L+ +M+ AGYVP+ +VL D++++ KE +L
Sbjct: 384 WIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSL 443
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIA+G+I+T P +R+ KNLR+CGDCH IK +S R+++VRD RFHHF
Sbjct: 444 SHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHF 503
Query: 465 RDGKCSCGDYW 475
+DG+CSCGDYW
Sbjct: 504 KDGRCSCGDYW 514
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+++ +C ++ S+E GK+ H + F DV + L+ MY +C + A VFD++
Sbjct: 13 LSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMS 72
Query: 191 KRNLSSWHLMIS-------------------------------GYAANGQGADGLMLFEQ 219
+R+ +W+ MI+ GYA NG G + L +F Q
Sbjct: 73 ERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQ 132
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
MRKTG D+ V +ACA A++ G F G I A++ + +G
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELG-RQFHAYVVQSGFALDIVVGSALVDMYAKSG 191
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ +A + ++MP V W ++ HG
Sbjct: 192 SMEDACQVFDKMPQRNEVS-WNSIITGCAQHG 222
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 217/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L C NL ++ +G+++H+L+ S KD LI MY KC + A K+F ++
Sbjct: 298 LSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP 357
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ +W+ MISGYA +G G L LF++MR PD TF+ V AC A V G
Sbjct: 358 RKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ MK ++GI HY +I +LG AG L EA ++ MPF P ++ L +IH
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIH 477
Query: 311 GDVELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSAT--NMLEEKNRVS------ 357
+++L + A L +LDP+ A + + + Q A M++E N V
Sbjct: 478 KNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSW 537
Query: 358 --------DYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++RS+D E ++K+ L+G+M+ AGYVPD + LHD++EE KEK L
Sbjct: 538 IEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLL 597
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GL+ T P P+R+ KNLR+CGDCH AIK +S I RE+IVRD RFHHFR
Sbjct: 598 WHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFR 657
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 658 NGFCSCGDYW 667
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA-ANGQGADGLMLFEQM 220
DV NK I + + C+ AR VF+++ R +W+ M+SGY G+ + LF+++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P PD ++ ++ + VK +F M V I + +I G
Sbjct: 132 ----PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMP-----VKDIASWNTLISGFAQNGQ 182
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD 334
+ +A + MP + V W A+ + HGD+E AEEL ++ +V+
Sbjct: 183 MQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLE---AAEELYKNVGMKSVVVE 232
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 115 IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-------ELLRTSAFVKDVELNN 167
I Q+ +D+FS + + G S + V E L + +K V +
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVET 233
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
++ Y K LA ++F ++ +NL +W+ MI+GY N + DGL +F+ M ++ P
Sbjct: 234 AMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRP 293
Query: 228 DKETFLVVFAACASAEAVKEG 248
+ + V C++ A+ G
Sbjct: 294 NPLSLSSVLLGCSNLSALPLG 314
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 222/371 (59%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L +C + ++E+GK+VH + + + N L+ MY KC N A VF+ +
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ + SW+ MI+GYA +G G + LMLFE M+KTG PD T + V +AC+ V +G
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M DYGI +HY +I +LG AG L +A+ ++ MPFEP W AL ++I
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 575
Query: 310 HGDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATN 348
HG+ EL ++A +++ +++P + V ++ L R KK +
Sbjct: 576 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N++ + D E Y ++ L+ +M++ GYV T+ VLHD++EE K L
Sbjct: 636 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 695
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+A+G+++ P P+R+IKNLR+C DCHNA+K +SKIVGR +I+RD+ RFHHF
Sbjct: 696 KYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHF 755
Query: 465 RDGKCSCGDYW 475
G+CSCGDYW
Sbjct: 756 NGGQCSCGDYW 766
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N +I Y + + AR FD++ +R+ SW +I+GYA +G G + L LF +M
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 385
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
++ G ++ TF + CA A++ G
Sbjct: 386 KRDGERLNRSTFTSTLSTCAEIAALELG 413
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y +C AR++F+ + +N+SSW+ MI+GYA NG A F++M P
Sbjct: 301 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRM----PQ 356
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
D ++ + A A + +E F MK D
Sbjct: 357 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 37/296 (12%)
Query: 66 RNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEY---MGQDA 122
R PS+ Q PKT + L +A + ++ + + + G+ A+ M + +
Sbjct: 29 RKPSTRNQ-PKTTS--------SLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRS 79
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S S +++++ C + + +++ E + T +D+ N +I + N R A
Sbjct: 80 SIS-----WNAMISGCLSNDKFYLARQLFEKMPT----RDLVSWNVMISGCVRYRNLRAA 130
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
R +FDQ+ +R++ SW+ M+SGYA NG + +F++M P + ++ + AA
Sbjct: 131 RLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLAAYVQN 186
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
+++ FE K D+ ++ + ++ L++A +RMP V
Sbjct: 187 GRIEDARRLFE-SKADWELIS----WNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM 241
Query: 303 LRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSD 358
+ +AQ +E + EE P + + + Q+ ML+E RV D
Sbjct: 242 ISGYAQNGELLEAQRLFEE-----SPVRDVFTWTAMVSGYVQNG--MLDEARRVFD 290
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSS 196
G L + R+ + R D EL + M G RL AR +FD++ +R+ S
Sbjct: 178 GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 237
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+ MISGYA NG+ + LFE+ P D T+ + + + E F+ M
Sbjct: 238 WNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP 293
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ + AII + +A E E MP + V W + +GD+
Sbjct: 294 EKNSV-----SWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDI 344
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 219/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C + ++E G ++H L + + K+ + N LI+MY KC N + AR VFD LR
Sbjct: 451 YSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLR 510
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + SW+ MISGY+ +G + L FE M +T PDK TF+ + +AC++A + G
Sbjct: 511 EHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQA 570
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M +Y I P EHY ++ +LG +GHL +A + V +PFEP+V VW AL + IH
Sbjct: 571 YFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIH 630
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
DVEL + + + +++P + ++ I R +K+ +
Sbjct: 631 NDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSW 690
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + RV + D + + + G LN + R GYVPD VL D+++ KE+ L
Sbjct: 691 IENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLW 750
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AYGLI TP PLRIIKNLRIC DCH AIK++SKIV R++I+RD RFHHF
Sbjct: 751 VHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFH 810
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 811 EGICSCGDYW 820
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFS++L + + ++G VH + F D + LI+ Y C AR+VFD +
Sbjct: 147 VFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI 206
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+++ SW M++ Y N + L LF +MR G P+ TF V AC E G
Sbjct: 207 EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGK 266
Query: 249 FLYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
++ K Y + G+E +I + +G + +A + E MP + + + +
Sbjct: 267 AVHGCAFKTSYLEELFVGVE----LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARY 322
Query: 307 AQ 308
AQ
Sbjct: 323 AQ 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 68/118 (57%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L +C L+ +GK VH +++++++ + +LI++Y K + A +VF+++
Sbjct: 249 FASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP 308
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K ++ W MI+ YA + Q + + +F +MR+ P++ T + ACAS ++ G
Sbjct: 309 KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLG 366
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +C +L +++G ++H + +V ++N L++MY KC + ++F +
Sbjct: 350 LASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
SW+ +I GY G G L+LF+ M + + T+ V ACA A++ G
Sbjct: 410 NCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPG 467
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ SLL SC GK +H + D+ NN L+ Y K + A K+FD++
Sbjct: 46 IYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEM 105
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN S+ +I GY+ + ++ + LF +++ G + F V SAE K GF
Sbjct: 106 PDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGF 165
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 216/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L C NL ++++GK+VH+L+ D L+ MY KC + + A ++F Q+
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ W+ MISGYA +G G L LF++M+K G PD TF+ V AC A V G
Sbjct: 326 RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M+ D+GI EHY ++ +LG AG L EA + ++ MPF+P ++ L +IH
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIH 445
Query: 311 GDVELEDRAEELLGDLDPSKAI--------------VDKIPLPPRK-------KQSATNM 349
++ L + A + L +LDP+ A D + R K +
Sbjct: 446 KNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSW 505
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V +RS+D E +EK+K L +M+ AGYVPD +VLHD+ EE KE+ L
Sbjct: 506 IEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLL 565
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GL+ P +P+R+ KNLR+CGDCH+A K +S I GRE+IVRD RFHHF+
Sbjct: 566 WHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFK 625
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 626 DGFCSCRDYW 635
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL-KSIEM 146
PL+ A ++ L + G+ R M + S + S +CG+L ++E
Sbjct: 131 PLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVS--WSAMVSGYVACGDLDAAVE- 187
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
+A ++ V +I Y K LA ++F ++ R L +W+ MI+GY
Sbjct: 188 -------CFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVE 240
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
NG+ DGL LF M +TG P+ + V C++ A++ G
Sbjct: 241 NGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLG 282
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN-GQGADGLMLFEQM 220
+V +NKLI Y +C + A +VF+ ++ ++ +W+ +++ +A G LFE++
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P P+ ++ ++ A V + +F+ M + + + +I L G
Sbjct: 100 ----PQPNTVSYNIMLACHWHHLGVHDARGFFDSMP-----LKDVASWNTMISALAQVGL 150
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ EA MP E W A+ + GD++
Sbjct: 151 MGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLD 183
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 217/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CGNL ++ G+ H + + F D+ + +++MY KC + LAR +FD+ +
Sbjct: 589 SVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK 648
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L W MI+ Y +G G + LF+QM K G P TF V +AC+ + ++EG +YF
Sbjct: 649 DLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF 708
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++M ++ I + +Y ++ +LG AG L EA + +E MP EP +W +L +IH +
Sbjct: 709 QLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 768
Query: 313 VELEDRAEELLGDLDPSKAI-----------------VDKI-PLPPRK---KQSATNMLE 351
++L ++ + L LDP A V+K+ + R+ K +++E
Sbjct: 769 LDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVE 828
Query: 352 EKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V + RS + Y K++ L M+ GYVP T +VLHDI+EEAKE AL YH
Sbjct: 829 YDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYH 888
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GLI+T P LRI KNLRICGDCHNAIK++SKIV R ++VRD RFH F DG
Sbjct: 889 SERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDG 948
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 949 VCSCGDYW 956
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 9/188 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V L +C N +S+ ++H + + + D KL +Y KC + + ARKVFD+
Sbjct: 6 VLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEG 248
N+ W+ + Y Q + L LF M T G PD T + ACA ++ G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 249 FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ K + I G + ++ A++++ G + EA + E P +W ++
Sbjct: 123 KVIHGFAKKNDEI--GSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTG 179
Query: 307 AQIHGDVE 314
Q + D E
Sbjct: 180 YQQNNDPE 187
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 101 NLLSLCKEGKVREAIE-YMGQDASASAGYDVFSS--LLDSCGNLKSIEMGKRVHELLRTS 157
L S C+E + E + + +A D F+ L +C L+ +E+GK +H + +
Sbjct: 73 TLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKN 132
Query: 158 AFV-KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
+ D+ + + L+E+Y KC A KVF++ ++ + W M++GY N + L L
Sbjct: 133 DEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALAL 192
Query: 217 FEQM 220
F QM
Sbjct: 193 FSQM 196
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%)
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
+++ F D+ L N L+ +Y K ++A +F ++ ++++ SW MI+ YA N
Sbjct: 195 QMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 254
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ L LF +M + P+ T + ACA + ++EG
Sbjct: 255 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 291
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + L + +H + S F +V + LIE+Y KC + A K+F + R+
Sbjct: 344 ILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRD 403
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQM 220
+ W MI+ Y +G+G + L +F+QM
Sbjct: 404 VVIWSSMIAAYGIHGRGGEALEIFDQM 430
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D + K MY A VF+ + W++MI G+A +G+ L L+ +M
Sbjct: 510 DSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM 569
Query: 222 KTGPHPD-------KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----A 270
+ G PD + + L V AC + A+++G + + Y I G E I A
Sbjct: 570 EKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWF-----HSYVIQTGFEFDILVATA 624
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I+ + G L A + + V W A+ IHG
Sbjct: 625 IMDMYSKCGSLDLARCLFDETAGKDLV-CWSAMIASYGIHG 664
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 213/371 (57%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ + SC L S++ G+++H + + + N LI MY +C A +F +
Sbjct: 428 FAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP 487
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MI+ +GQG + LFE+M K G PD+ +FL V +AC+ A VKEG
Sbjct: 488 CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRK 547
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M N YG+ P EHY II +L AG EA+E +E MPFEP +WEAL +IH
Sbjct: 548 YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIH 607
Query: 311 GDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR--KKQSATN 348
G+++L A E L +L P A V K+ + R KK+ +
Sbjct: 608 GNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKL-MRDRGVKKEPGCS 666
Query: 349 MLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N+V + D R Y ++ L +MR+ GYVPDT+ VLHD++ + KE L
Sbjct: 667 WIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHEL 726
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+AYG + P +R+ KNLRICGDCHNA K MSK+VGRE++VRD KRFHHF
Sbjct: 727 STHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHF 786
Query: 465 RDGKCSCGDYW 475
RDGKCSCGDYW
Sbjct: 787 RDGKCSCGDYW 797
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLRTSAF-VKDVEL--NNKLIEMYGKCCNTRLARKVF 186
F+S++ C N +GK +H L+T A DV + NN LI Y KC +A+++F
Sbjct: 292 FTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIF 351
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+++ +R+L SW++++SGY + F +M P + +++++ + A +
Sbjct: 352 NKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEM----PEKNILSWIIMISGLAQIGFAE 407
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAII---KVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E +F MK G P + I VLGS H + V R +E ++ AL
Sbjct: 408 EALKFFNRMKLQ-GFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNAL 466
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I Y K + A++ + K+ +W+ MISGYA G + +F +M + D
Sbjct: 229 IITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLD 288
Query: 229 KETFLVVFAACASAEAV---KEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIE 283
+ TF V + CA+A KE YF +K P + + A+I G +
Sbjct: 289 EFTFTSVISVCANAGCFRLGKEMHAYF--LKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
A+E +MP E + W + + + +V D A+ ++ P K I+ I
Sbjct: 347 AQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDEAKSFFNEM-PEKNILSWI 394
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 216/371 (58%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C N +++ GK +H + + + D+ + N L+ MY KC + A +VF+ +
Sbjct: 434 TYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGM 493
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ +W+ +I G NG+G + L +E M+ G P+ TF+ V +AC V+EG
Sbjct: 494 SMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGR 553
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M DYGIVP +HY ++ +L AGHL EAE+ + +P +P+ +W AL +I
Sbjct: 554 RQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRI 613
Query: 310 HGDVELEDRAEELLGDLDPSKA-----------------IVDKIP--LPPR--KKQSATN 348
H +VE+ +RA E L+P A V K+ + R KK+ +
Sbjct: 614 HCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRS 673
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E V + + D Y +++ L QM+ GYVPDTR+V+HD+D+E KE+A+
Sbjct: 674 WIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAV 733
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIAYGLISTPP P+RI KNLR+C DCH A K +SKI RE+I RD RFHHF
Sbjct: 734 CHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHF 793
Query: 465 RDGKCSCGDYW 475
++G+CSCGDYW
Sbjct: 794 KNGECSCGDYW 804
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ ++L +CG+L ++E GK++H + S + DV ++ L +MY KC + AR+VF+ L
Sbjct: 232 TYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECL 291
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ +W+ MI G+ +GQ + F +M + G PD+ T+ V +ACA + G
Sbjct: 292 SYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGK 351
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
D G+V + A+I + AG + +A + +RMP V W L
Sbjct: 352 EIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS-WTTL 403
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
+ ++Y+ + YD + LL SC K + +GK+VHE + +V + N L+++
Sbjct: 14 DVLQYLHRKGPQVDSYD-YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKL 72
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
Y C + AR++FD+ +++ SW++MISGYA G + LF M++ PDK TF
Sbjct: 73 YAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTF 132
Query: 233 LVVFAACASAEAVKEG 248
+ + +AC+S + G
Sbjct: 133 VSILSACSSPAVLNWG 148
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +C + + G+ +H + + D + N LI MY KC + R AR+VFD +
Sbjct: 131 TFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAM 190
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
R+ SW + YA +G G + L + M + P + T++ V +AC S A+++G
Sbjct: 191 ASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
++ I++++Y + A+ K+ G +A E E + + + +R F
Sbjct: 251 QIHAHIVESEYH--SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGF 306
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++++L +C + GK +H V DV N LI MY K + + AR+VFD++
Sbjct: 333 TYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 392
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR++ SW ++ YA Q + F+QM + G +K T++ V AC++ A+K G
Sbjct: 393 PKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGK 452
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ E++K G++ + A++ + G + +A E M V W L
Sbjct: 453 EIHAEVVKA--GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVV-TWNTL 504
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 217/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CGNL ++ G+ H + + F D+ + +++MY KC + LAR +FD+ +
Sbjct: 924 SVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK 983
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L W MI+ Y +G G + LF+QM K G P TF V +AC+ + ++EG +YF
Sbjct: 984 DLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF 1043
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++M ++ I + +Y ++ +LG AG L EA + +E MP EP +W +L +IH +
Sbjct: 1044 QLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 1103
Query: 313 VELEDRAEELLGDLDPSKAI-----------------VDKI-PLPPRK---KQSATNMLE 351
++L ++ + L LDP A V+K+ + R+ K +++E
Sbjct: 1104 LDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVE 1163
Query: 352 EKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V + RS + Y K++ L M+ GYVP T +VLHDI+EEAKE AL YH
Sbjct: 1164 YDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYH 1223
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GLI+T P LRI KNLRICGDCHNAIK++SKIV R ++VRD RFH F DG
Sbjct: 1224 SERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDG 1283
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 1284 VCSCGDYW 1291
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 136/271 (50%), Gaps = 26/271 (9%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H + S F +V + LIE+Y KC + A K+F + R++ W MI+ Y +G+
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 489
Query: 210 GADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
G + L +F+QM K P+ TFL + +AC+ A V+EG F+ M +DY + P EH+
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHF 549
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
++ +LG G L +A + + RMP VW AL +IH ++E+ + A + L LDP
Sbjct: 550 GIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDP 609
Query: 329 SKA----------IVD-----------KIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRG 367
S A VD +I KK +M+E + V + ++D +
Sbjct: 610 SHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHP 669
Query: 368 E----YEKMKGLNGQMREAGYVPDTRYVLHD 394
+ YE ++ L QM + Y+PD ++LHD
Sbjct: 670 DSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L SC L ++ GK +H+ L D+ ++ L++MY KC + AR VFD++
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+L SW MISGYA NG ++ L F+ MR +G P++ + L V AC + A+++G
Sbjct: 881 VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ + Y I G E I AI+ + G L A + + V W A+
Sbjct: 941 F-----HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLV-CWSAMIAS 994
Query: 307 AQIHG 311
IHG
Sbjct: 995 YGIHG 999
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C +++E GK++H++ F D ++ LI+MY KC A +F +L K+
Sbjct: 312 SALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK 371
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LY 251
++ SW ++SGYA NG + +F M G PD + + AA + ++ L+
Sbjct: 372 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLH 431
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++++ G + ++I++ G L +A + + M V +W ++ IHG
Sbjct: 432 GYVVRS--GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV-IWSSMIAAYGIHG 488
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C L +++ G VH L+ F D+ L N L+ +Y K ++A +F ++ ++
Sbjct: 211 SVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK 270
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW MI+ YA N + L LF +M + P+ T + ACA + ++EG
Sbjct: 271 DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 326
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 101 NLLSLCKEGKVREAIE-YMGQDASASAGYDVFSS--LLDSCGNLKSIEMGKRVHELLRTS 157
L S C+E + E + + +A D F+ L +C L+ +E+GK +H + +
Sbjct: 73 TLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKN 132
Query: 158 AFV-KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
+ D+ + + L+E+Y KC A KVF++ ++ + W M++GY N + L L
Sbjct: 133 DEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALAL 192
Query: 217 FEQMRKTGPHP-DKETFLVVFAACASAEAVKEG 248
F QM D T + V +ACA VK G
Sbjct: 193 FSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAG 225
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 5/186 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V L +C N +S+ ++H + + + D KL +Y KC + + ARKVFD+
Sbjct: 6 VLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEG 248
N+ W+ + Y Q + L LF M T G PD T + ACA ++ G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ K + I + A++++ G + EA + E P +W ++ Q
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQ 181
Query: 309 IHGDVE 314
+ D E
Sbjct: 182 QNNDPE 187
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K+ H + D + K MY A VF+ + W++MI G+A +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
G+ L L+ +M + G PDK F +CA ++ G
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRG 837
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 238/408 (58%), Gaps = 28/408 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHE 152
L S + +L + G++ EAI+Y + + D F+ S++ + L + K +H
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+ + K+V + L++MY KC ARK+FD + +R++++W+ MI GY +G G
Sbjct: 503 LVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKA 562
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L LFE+M+K P++ TFL V +AC+ + V+EGF YF MK DYG+ P ++HY A++
Sbjct: 563 ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMV 622
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP---- 328
+LG A L EA +F+++MP EP + V+ A+ +IH +VEL ++A + DLDP
Sbjct: 623 DLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGG 682
Query: 329 ----------SKAIVDKIPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGE--- 368
+ ++ DK+ +K +++E +N V + S +
Sbjct: 683 YHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKK 742
Query: 369 -YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
Y ++ L +++ AGY+PDT V HD+++ KE+ L HSE+LAIA+ L++T P +
Sbjct: 743 IYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIH 801
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ KNLR+CGDCHNA K +S + RE+IVRD +RFHHF+DG CSCGDYW
Sbjct: 802 LRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
L+G A+ SLD + C+ M D Y+ F+ LL CG+ + GK
Sbjct: 147 LKGYARNSSLDDAVSFFCR----------MRYDGVRPVVYN-FTYLLKVCGDNADLRKGK 195
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H L + F +V ++ MY KC A K+FD++ +R+L W+ +ISGYA NG
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG 255
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
G L L +M++ G PD T + + A A +++ G + Y + G E +
Sbjct: 256 FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSI-----HGYSMRAGFESF 310
Query: 269 I----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ A++ + G + A +RM + TV W ++ + +GD
Sbjct: 311 VNVSTALVDMYSKCGSVGTARLIFDRMTGK-TVVSWNSMIDGYVQNGD 357
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 120 QDASASAGYDVFSSLLD---------------SCGNLKSIEMGKRVHELLRTSAFVKDVE 164
Q+ A ++F ++D +C +L +E G+ VH+LL DV
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVS 413
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY KC +A ++F+ L+ + L SW+ MI GYA NG+ + + F +M+
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN 473
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV------PGIEHYIAIIKVLGSA 278
PD T + V A A + + K +G+V + A++ +
Sbjct: 474 IKPDSFTMVSVIPALAELSVLPQA-------KWIHGLVIRTCLDKNVFVATALVDMYAKC 526
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + A + + M E V W A+ + HG
Sbjct: 527 GAVHTARKLFDMMD-ERHVTTWNAMIDGYGTHG 558
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L + ++ S+ +G+ +H + F V ++ L++MY KC + AR +FD++ +
Sbjct: 281 SILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK 340
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ SW+ MI GY NG + +F++M T + ACA V++G
Sbjct: 341 TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG 396
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL+ C ++K E+ + + +++ + + + KL+ ++ K + A +VF + +
Sbjct: 83 LLELCTSMK--ELHQFIPLIIKNGLYSEHL-FQTKLVSLFCKFGSLHEAARVFQPIEDKI 139
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+H M+ GYA N D + F +MR G P F + C +++G ++
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++ N G + ++ + + EA + +RMP E + W +
Sbjct: 200 QLIVN--GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTI 247
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 216/375 (57%), Gaps = 33/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH + F+ D+ N L+ MY KC + A F ++
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRI 475
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R + SW MI G A +G G + L LF+QM K G P+ T + V AC A V E
Sbjct: 476 PVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK 535
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI P EHY +I +LG AG L A E V +MPF+ VW AL A+I
Sbjct: 536 HYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARI 595
Query: 310 HGDVELEDRAEELLGDLDPSKA--------------IVDKIPLPPR-------KKQSATN 348
H +++L ++A E+L L+P K+ + DK+ R KK+ +
Sbjct: 596 HKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMS 655
Query: 349 MLEEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
LE K++V + RST++ Y K+ L+ +++AGYVP LHD++ K
Sbjct: 656 WLEVKDKVYTFIVGDRSHSRSTEI----YAKLDELSDLLKKAGYVPMVEIDLHDVERSEK 711
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+ L +HSE+LA+A+GLI+TPP P+R+ KNLRIC DCH +K +SKIV RE+IVRD R
Sbjct: 712 EQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNR 771
Query: 461 FHHFRDGKCSCGDYW 475
FHHFR+G CSCG+YW
Sbjct: 772 FHHFREGSCSCGEYW 786
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L S L++ M +++H L S F D + N LI+ YGKC + A +VF++
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESP 375
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+L + +++ YA +GQG + L L+ +M+ G PD + ACAS A ++G
Sbjct: 376 IVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQ 435
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ I+K +G + I +++ + G + +A R+P V W A+
Sbjct: 436 VHVHILK--FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS-WSAMIGGLAQ 492
Query: 310 HG 311
HG
Sbjct: 493 HG 494
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +C K + +GK+VH ++ + F D + N L+ +Y KC AR +FD +
Sbjct: 13 FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP 72
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R++ SW+ + S Y + + + LF M +G P++ + + C E +G
Sbjct: 73 DRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRK 132
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K Y + A++ + G L +A + + +P + W A+ +
Sbjct: 133 IHGYLIKLGYDSDAFSAN--ALVDMYAKVGILEDASSVFDEIA-KPDIVSWNAIIAGCVL 189
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNR 355
H E RA ELL +++ S + L K A L E R
Sbjct: 190 H---EYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS L +C + E+G+++H L D L LI+MY KC + AR VF +
Sbjct: 215 LSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMP 274
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA------ 244
+R++ +W+ +ISG++ N + + LF M G ++ T V + A+ +A
Sbjct: 275 ERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQ 334
Query: 245 -----VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+K GF + + N ++I G GH+ +A E P V
Sbjct: 335 IHALSLKSGFEFDNYVVN------------SLIDTYGKCGHVEDATRVFEESPIVDLVLF 382
Query: 300 WEALRNFAQ 308
+ +AQ
Sbjct: 383 TSLVTAYAQ 391
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 222/371 (59%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L +C + ++E+GK+VH + + + N L+ MY KC N A VF+ +
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ + SW+ MI+GYA +G G + LMLFE M+KTG PD T + V +AC+ V +G
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M DYGI +HY +I +LG AG L +A+ ++ MPFEP W AL ++I
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494
Query: 310 HGDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATN 348
HG+ EL ++A +++ +++P + V ++ L R KK +
Sbjct: 495 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N++ + D E Y ++ L+ +M++ GYV T+ VLHD++EE K L
Sbjct: 555 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 614
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+A+G+++ P P+R+IKNLR+C DCHNA+K +SKIVGR +I+RD+ RFHHF
Sbjct: 615 KYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHF 674
Query: 465 RDGKCSCGDYW 475
G+CSCGDYW
Sbjct: 675 NGGQCSCGDYW 685
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N +I Y + + AR FD++ +R+ SW +I+GYA +G G + L LF +M
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 304
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
++ G ++ TF + CA A++ G
Sbjct: 305 KRDGERLNRSTFTSTLSTCAEIAALELG 332
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y +C AR++F+ + +N+SSW+ MI+GYA NG A F++M P
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRM----PQ 275
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
D ++ + A A + +E F MK D
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 307
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSS 196
G L + R+ + R D EL + M G RL AR +FD++ +R+ S
Sbjct: 97 GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 156
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+ MISGYA NG+ + LFE+ P D T+ + + + E F+ M
Sbjct: 157 WNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP 212
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ + AII + +A E E MP + V W + +GD+
Sbjct: 213 EKNSV-----SWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDI 263
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N R AR +FDQ+ +R++ SW+ M+SGYA NG + +F++M P + ++ + A
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLA 100
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
A +++ FE K D+ ++ + ++ L++A +RMP V
Sbjct: 101 AYVQNGRIEDARRLFE-SKADWELIS----WNCMMGGYVKRNRLVDARGIFDRMPERDEV 155
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVS 357
+ +AQ +E + EE P + + + Q+ ML+E RV
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEE-----SPVRDVFTWTAMVSGYVQNG--MLDEARRVF 208
Query: 358 D 358
D
Sbjct: 209 D 209
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 219/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++ SC NL S+E G + H S + + ++N LI +YGKC +T + ++F ++
Sbjct: 374 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMN 433
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ SW +++GYA G+ + + LFE+M G PD TF+ V +AC+ A V++G
Sbjct: 434 IRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQ 493
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE M ++GI+P ++H II +LG AG L EA F+ MP P V W L + ++H
Sbjct: 494 YFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVH 553
Query: 311 GDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNM 349
GD+E+ A + L L+P SK DK+ R +K+ +
Sbjct: 554 GDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSW 613
Query: 350 LEEKNRVSDYRSTDL---YRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ K +V + + D + G+ Y +++ LN +M E GYVPD VLHD++E K K L
Sbjct: 614 IKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLN 673
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLI PP +P+R+IKNLR+CGDCHNA K +SKI RE++VRD RFH F+
Sbjct: 674 HHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFK 733
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 734 DGTCSCGDFW 743
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S + + L + G REA++ + A D F S+L +CG+L ++ GK++H +
Sbjct: 237 SWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYV 296
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ +V + + L++MY KC + + A VF ++ ++N+ SW M+ GY NG + +
Sbjct: 297 IRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAV 356
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
+F +M++ G PD T V ++CA+ +++EG F G++ I A+I +
Sbjct: 357 KIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALITL 415
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
G G + M V L +AQ
Sbjct: 416 YGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQF 450
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC- 176
M +DA+ + FS++L C + +++G++++ + F DV + + L++MY K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 177 -------------------CNTRL-----------ARKVFDQLRKRNLSSWHLMISGYAA 206
CNT + ++++F L++R+ SW +MI+G
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY--GIVP 263
NG + L +F +MR G D+ TF V AC S A+ EG ++ +++ D+ +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G A++ + + AE +RMP + V W A+
Sbjct: 308 G----SALVDMYSKCRSIKSAETVFKRMP-QKNVISWTAM 342
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S+S+ Y ++SLL C ++ K++H L+ + + L+N LI Y K N A
Sbjct: 2 SSSSNY--YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYA 59
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
VFD + + NL SW+ ++S Y+ G + +F M P D ++ + + A+
Sbjct: 60 HHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLM----PFRDGVSWNLAISGYANY 115
Query: 243 EAVKEGFLYFEIMKND 258
+ + +++M D
Sbjct: 116 GSCSDAVRVYKLMLKD 131
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 217/371 (58%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +G+++H + F + + + L++MY KC N ++AR VFD++
Sbjct: 331 FSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID 390
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR++ +W +I G A +G D + LFE M + G P F+ V AC+ A V EG+
Sbjct: 391 KRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWR 450
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM-PFEPTVEVWEALRNFAQI 309
YF M+ D+GI PG+EHY A+ +LG AG L EA +F+ M +PT VW L +
Sbjct: 451 YFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRA 510
Query: 310 HGDVELEDRAEELLGDLDPSK-------------------AIVDKIPLPPR--KKQSATN 348
H VEL ++ + L +D A +I + + KK A +
Sbjct: 511 HKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACS 570
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKM-KGLN---GQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E N+V + + D Y+K+ K L+ QM + GYV DT VLHD+DEE K + L
Sbjct: 571 WIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELL 630
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIAYG+IST +R+IKN+R+C DCH AIK ++KIVGRE+ VRDN RFHHF
Sbjct: 631 HNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHF 690
Query: 465 RDGKCSCGDYW 475
++G CSCGDYW
Sbjct: 691 KNGSCSCGDYW 701
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S + + + G EA++ MG++ SS+L + GK +H
Sbjct: 193 SWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY 252
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+ F DV + + LI+MY KC + + F L +++ SW+ +I+G NG+ G
Sbjct: 253 AVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRG 312
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L F +M K P +F V ACA A+ G
Sbjct: 313 LGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLG 347
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT---------- 179
VF SLL + LK ++ +H D+ + N LI Y K N
Sbjct: 112 VFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKR 171
Query: 180 -----RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFL 233
+KVFD + R++ SW+ +I+G+A NG + L + +M K G PD T
Sbjct: 172 GESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLS 231
Query: 234 VVFAACASAEAVKEG 248
+ A V +G
Sbjct: 232 SILPIFAEHVDVNKG 246
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 222/373 (59%), Gaps = 34/373 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L SC L ++++GK +HE ++ + K V++N LI+MY KC + A VF+ + R
Sbjct: 233 SVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVR 292
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W MI YA +GQG D + +FE+M + PD+ TFL + AC+ V EGF YF
Sbjct: 293 DTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYF 352
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M YGI+PGI+HY ++ +LG AG L EA +F++ +P +PT +W L + HG+
Sbjct: 353 YSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGN 412
Query: 313 VELEDRAEELLGDLDPS-------------------------KAIVDK--IPLPPRKKQS 345
+EL + + +LD S K ++ K + +P
Sbjct: 413 LELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIE 472
Query: 346 ATNMLEE--KNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLH-DIDEEAKEK 402
N++ E Y ST L+R E +K +++ GYVPDT V+H D+++E KE
Sbjct: 473 VDNVVHEFFSGDGVHYVSTALHRALDELVK----ELKSVGYVPDTSLVVHPDMEDEEKEI 528
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L+YHSE+LAI++GL++TPP +R++KNLR+CGDCH+A K++S ++ RE+I+RD +RFH
Sbjct: 529 TLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFH 588
Query: 463 HFRDGKCSCGDYW 475
HF+DGKCSCGDYW
Sbjct: 589 HFKDGKCSCGDYW 601
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C K+ + GK++H L ++ + LI MY C + A++VFD++
Sbjct: 130 FPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEIL 189
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + S++ +I+GYA + + + L LF Q++ P+ T L V ++CA A+ G
Sbjct: 190 EPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKW 249
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
E +K + G++ Y+ A+I + G L A E M T + W A+
Sbjct: 250 IHEYVKKN-----GLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDT-QAWSAMIVA 303
Query: 307 AQIHG 311
+HG
Sbjct: 304 YAMHG 308
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 210/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS L C L ++++G++VH+L+ S D LI MY KC K+F Q+
Sbjct: 199 TLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQV 258
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ +W+ MISGYA +G+G L LF++M + G PD TF+ V AC A G
Sbjct: 259 PRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGV 318
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M DYG+V +HY ++ +LG AG L+EA + +E+MPF+P V+ L +I
Sbjct: 319 KYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRI 378
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------VDKIPLPPRKKQSAT-------N 348
H + E+ + A + L +LDP+ A D + + +S +
Sbjct: 379 HKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYS 438
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKAL 404
+E K+ +RS D + E + G ++ + AGYVPD + LHD+ EE KE+ L
Sbjct: 439 WIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLL 498
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIAYGLI PP P+R+ KNLR+CGDCH AIK +S+I RE+IVRD RFHHF
Sbjct: 499 LWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHF 558
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 559 KDGHCSCADYW 569
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG+L S +L + F K V +I Y K LA ++F+++ ++NL +W
Sbjct: 113 CGDLDS------ALKLFEKAPF-KSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTW 165
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ MI+GY N + DG+ LF M G P+ T C+ A++ G
Sbjct: 166 NAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLG 216
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 219/372 (58%), Gaps = 34/372 (9%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L SC L S+++G+ +HE ++ F + V++N LI+MY KC + A VF + KR+
Sbjct: 219 VLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRD 278
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+W +I YA +G G + + +M+K PD+ TFL + AC+ V+EGF YF
Sbjct: 279 TQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFH 338
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M N+YGIVP I+HY ++ +LG AG L EA +F++ +P +PT +W L + HG+V
Sbjct: 339 GMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNV 398
Query: 314 ELEDRAEELLGDLDPS-------------------------KAIVDK--IPLPPRKKQSA 346
E+ R E + +LD S K ++DK + +P
Sbjct: 399 EMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEV 458
Query: 347 TNMLEE--KNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLH-DIDEEAKEKA 403
N++ E ST L+R E +K +++ AGYVPDT V + D+++E KE
Sbjct: 459 NNVVHEFFAGEGVHSTSTTLHRALDELVK----ELKSAGYVPDTSLVFYADMEDEEKEII 514
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSE+LAI +GL++TPP +R++KNLR+CGDCHNA K +S I GR++I+RD +RFHH
Sbjct: 515 LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHH 574
Query: 464 FRDGKCSCGDYW 475
F+DGKCSCGDYW
Sbjct: 575 FKDGKCSCGDYW 586
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 30/322 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L +K++ GK++H ++ + LI MY C + +R+VFD++
Sbjct: 115 FRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKID 174
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +++ +I A N + + L LF ++++ G P T LVV ++CA ++ G
Sbjct: 175 EPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRW 234
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
E +K YG ++ +I + G L +A MP T + W A+ H
Sbjct: 235 MHEYVKK-YGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDT-QAWSAIIVAYATH 292
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE 370
GD +A +L ++ K D+I + N L E E
Sbjct: 293 GD---GFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVE-----------------E 332
Query: 371 KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII- 429
+ +G E G VP ++ +D L + RL AY I P P I+
Sbjct: 333 GFEYFHGMTNEYGIVPSIKHYGCMVD-------LLGRAGRLDEAYKFIDELPIKPTPILW 385
Query: 430 KNLRICGDCHNAIKIMSKIVGR 451
+ L H +++ +++ R
Sbjct: 386 RTLLSACSTHGNVEMGKRVIER 407
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 213/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L++CG L +E GK VH D + LI MY KC AR VFD++ R
Sbjct: 501 TILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR 560
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W+ M++GY +G G + + LF++M K P++ T V +AC+ A V+EG F
Sbjct: 561 DTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIF 620
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M+ D+ + P +HY ++ +LG AG L EAEEF++ MP EP + VW AL + H +
Sbjct: 621 RMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNN 680
Query: 313 VELEDRAEELLGDLDPSKAIV--------------DKIPLPPR-------KKQSATNMLE 351
V+L +RA + +L+PS A V D R KK + +E
Sbjct: 681 VQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIE 740
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
R+ + + D E + +++ L +M+EAGY PD R+VLHD+D+ KEKAL +H
Sbjct: 741 IDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHH 800
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIAYGL+ TP P+RI+KNLR+CGDCH A K +SKI RE++ RD RFH+F +G
Sbjct: 801 SEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNG 860
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 861 TCSCGDFW 868
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 43/357 (12%)
Query: 110 KVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
K+ EA E Q A S F SLL+SC +++ G+R+H + D+ + N
Sbjct: 238 KLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVAN 297
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG----QGADGLM-LFEQMRK 222
LI MY KC + + AR++FD++ KR++ SW MI+GYA +G + D + L E+MR+
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G P+K TF+ + AC + A+++G ++ E+ K + + ++ AI + G +
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSI 415
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR 341
EAE+ +M + V A +F ++ GDL ++ + ++P
Sbjct: 416 YEAEQVFSKMANKNVV----AWTSFLSMYIKC----------GDLSSAEKVFSEMP---- 457
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDE---- 397
N++ ++ Y G+ K+ L M+ G+ PD V+ ++
Sbjct: 458 ----TRNVVSWNLMIAGYAQN----GDIVKVFELLSSMKAEGFQPDRVTVITILEACGAL 509
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
E+ H+E A+ GL S + +I CG A + K+ R+ +
Sbjct: 510 AGLERGKLVHAE--AVKLGLESDTV-VATSLIGMYSKCGQVAEARTVFDKMSNRDTV 563
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
LCK G++REAI+ +G + + + +++ C + E GK VH+ L D
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L N LI Y K + A +VF ++ R++ +W MI+ YA N A FE+M
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P++ TFL + AC + +++G I+K G+ + A+I + G +
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKA-MGMETDVAVATALITMYSKCGEIS 209
Query: 283 EAEEFVERMPFEPTVEVWEAL 303
A E +M E V W A+
Sbjct: 210 VACEVFHKMT-ERNVVSWTAI 229
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
DA+ F S+L +C N +E G+++H +++ DV + LI MY KC
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+A +VF ++ +RN+ SW +I A + + + L+EQM + G P+ TF+ + +C
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Query: 241 SAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ EA+ G ++ I ++ G+ + A+I + + EA E +RM +
Sbjct: 270 TPEALNRGRRIHSHI--SERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS- 326
Query: 300 WEAL 303
W A+
Sbjct: 327 WSAM 330
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC------------- 176
F S+L +C ++E G+++H L F D L + MY KC
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 177 -----------------C-NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
C + A KVF ++ RN+ SW+LMI+GYA NG L
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLS 485
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
M+ G PD+ T + + AC + ++ G ++ E +K G+ ++I +
Sbjct: 486 SMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK--LGLESDTVVATSLIGMYSK 543
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
G + EA ++M TV W A+ HGD
Sbjct: 544 CGQVAEARTVFDKMSNRDTV-AWNAMLAGYGQHGD 577
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 227/409 (55%), Gaps = 27/409 (6%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH 151
Q+ + +V + G+ REA+E + + D F S+L++C + S+ GK +H
Sbjct: 279 QITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH 338
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
DV + N L MY KC + AR++FD + R+ SW+ M+ YA +G+
Sbjct: 339 SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESE 398
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ L L +M + G + TF+ V ++C+ A + EG YF + +D GI EHY +
Sbjct: 399 EVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCL 458
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--- 328
+ +LG AG L EAE+++ +MP EP + W +L ++H D++ A L +LDP
Sbjct: 459 VDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNS 518
Query: 329 SKAIVDKIPLPPR------------------KKQSATNMLEEKNRVSDYRSTDLYRGE-- 368
S ++V R KK + ++ KN+V ++R D
Sbjct: 519 SASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAA 578
Query: 369 --YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPL 426
Y+K++ L MREAGYVPDT+ VLHD+DEE KE L YHSE+LAIA+GLISTP + L
Sbjct: 579 EIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSL 638
Query: 427 RIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I KNLR+C DCH A K +SKI GRE++VRDN RFHHFRDG CSC DYW
Sbjct: 639 HIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+LD+C N ++++ GK V E + ++F D+ + LI MY +C + A +VF ++
Sbjct: 113 TFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRM 172
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++NL +W +I+ +A +G + L F M++ G P++ TF+ + + ++E
Sbjct: 173 KQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE-L 231
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLG--SAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ ++G+ A++ V G G L AE ++ M E + W L N
Sbjct: 232 SRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGY 290
Query: 308 QIHG 311
+HG
Sbjct: 291 TLHG 294
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L+S + ++ GK +H +R S DV +N L+ Y KC + ARKVFD +
Sbjct: 12 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 71
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ MIS Y+ + + + +F++M+ G D+ TFL + AC + E ++ G
Sbjct: 72 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHG 130
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 102 LLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+ + G EA+ Y M Q F SLL+ +E R+H L+
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 243
Query: 160 VKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
++N L+ +YG+C L A + ++ ++ +++W+++I+GY +G+ + L +
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY 303
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIK 273
++++ DK TF+ V AC S+ ++ EG M + + G++ + A+
Sbjct: 304 QRLQLEAIPVDKVTFISVLNACTSSTSLAEG-----KMIHSNAVECGLDSDVIVKNALTN 358
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G + A + MP V L+ +AQ HG+ E
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ-HGESE 398
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 218/372 (58%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +GK++H + F + + + L++MY KC N ++AR +F+++
Sbjct: 303 FSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIE 362
Query: 191 --KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ SW +I G A +G D + LFE+M G P F+ V AC+ A V EG
Sbjct: 363 MCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEG 422
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ YF M+ D+G+ PG+EHY A+ +LG AG L EA +F+ M EPT VW L +
Sbjct: 423 WKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACR 482
Query: 309 IHGDVELEDRAEELLGDLDP---------------SKAIVDKIPLPPR------KKQSAT 347
H ++EL ++ + +DP ++ D L R KK A
Sbjct: 483 AHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPAC 542
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKM-KGLN---GQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E N+V + + D Y+K+ + LN QM + GYV DT VLHD+DEE K
Sbjct: 543 SWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDL 602
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+ HSERLAIA+G+IST +R+IKN+R+C DCH AIK M+KIVGRE+IVRDN RFHH
Sbjct: 603 LRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHH 662
Query: 464 FRDGKCSCGDYW 475
F++G CSCGDYW
Sbjct: 663 FKNGSCSCGDYW 674
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKS 143
N + GNAQ G EA+ + + + D F SS+L +
Sbjct: 168 NTVIAGNAQ-------------NGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHAN 214
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+ GK +H F KDV + + LI+MY KC L+ F L R+ SW+ +I+G
Sbjct: 215 VTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAG 274
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
NG+ GL F +M K P + +F V ACA A+ G
Sbjct: 275 CVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLG 319
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 218/370 (58%), Gaps = 32/370 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +GK++H + + F +++ + + L++MY KC N R A+++FD++R
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW MI G A +GQ D + LFEQM + E V AC+ V E +
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQM-------ETEGIKAVLTACSHGGLVDEAWK 455
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+GI PG+EHY A+ +LG AG L EA +F+ M PT +W L + ++H
Sbjct: 456 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 515
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
++++ ++ + ++DP+ ++ I R +K A +
Sbjct: 516 KNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSW 575
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E KN+V + + D YEK M+ L M + GYVPDT V HD++EE K+ +
Sbjct: 576 IEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVC 635
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAI +G+I+TP M +R+ KNLR+C DCH A K +SKIVGRE++VRDN RFHHF+
Sbjct: 636 SHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFK 695
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 696 NGTCSCGDYW 705
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G E + + + A+ D F SS+L I GK +H D+
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIY 275
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + LI+MY KC + +VF L +R+ SW+ +I+G NG +GL F QM
Sbjct: 276 VASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK 335
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P +F + ACA + G L+ I +N G I +++ + G++
Sbjct: 336 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN--GFDENIFIASSLVDMYAKCGNIRT 393
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGD----VELEDRAE 320
A++ +RM V W A+ +HG +EL ++ E
Sbjct: 394 AKQIFDRMRLRDMVS-WTAMIMGCALHGQAPDAIELFEQME 433
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 32/153 (20%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC------CNTRL 181
++VF S+L SC L + +G+ +H + D+ N L+ MY K RL
Sbjct: 106 HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRL 165
Query: 182 A--------------------------RKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
RK+F+ + +++L SW+ +I+G A NG + L
Sbjct: 166 GAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +M PD T V A + G
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 218/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS L +C ++ ++E+GK++H L + + N L+ MY KC + A +F ++
Sbjct: 407 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 466
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ MI+GY+ +G G + L FE M++ G PD T + V +AC+ V +G
Sbjct: 467 GKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 526
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M DYG+ P +HY ++ +LG AG L EA ++ MPFEP +W L +++H
Sbjct: 527 YFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVH 586
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATNM 349
G+ EL + A + + ++P + V K+ + R KK +
Sbjct: 587 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 646
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+ + D + E ++ ++ L+ +M++AGYV T VLHD++EE KE+ ++
Sbjct: 647 IEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVR 706
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLA+AYG++ P+R+IKNLR+C DCHNAIK M+K+ GR +I+RDN RFHHF+
Sbjct: 707 YHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFK 766
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 767 DGSCSCGDYW 776
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+EM K + +++ ++V N +I Y +C A+ +FD++ KR+ SW MI+G
Sbjct: 323 VEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 378
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY--G 260
Y+ +G + L LF M + G ++ +F + CA A++ G L+ ++K Y G
Sbjct: 379 YSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 438
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G A++ + G + EA + + M + V W + HG
Sbjct: 439 CFVG----NALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHG 484
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 67 NPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIE-YMGQDASAS 125
N S++ +T SQ P G++ ++ +V + S + G+ EA+ + +S
Sbjct: 31 NFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSS 90
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
Y+ S G L++ E + +L +D+ N +I+ Y + N AR++
Sbjct: 91 VSYNAMIS-----GYLRNGEF--ELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKAREL 143
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+++ +R++ SW+ ++SGYA NG D +F++M P + ++ + +A +
Sbjct: 144 FERMPERDVCSWNTILSGYAQNGCVDDARRVFDRM----PEKNDVSWNALLSAYVQNSKL 199
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+E + F +N + +V + ++ ++EA +F + M V +
Sbjct: 200 EEACVLFGSREN-WALVS----WNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITG 254
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+AQ G++D ++ + D+ P+
Sbjct: 255 YAQN--------------GEIDEARQLFDESPV 273
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+DV N +I Y + AR++FD+ ++ +W M+SGY N + LF++
Sbjct: 242 VRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDR 301
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP--GIEHYIAIIKVLGS 277
M P ++ ++ + A E V E+ K + ++P + + +I
Sbjct: 302 M----PERNEVSWNAMLAGYVQGERV-------EMAKELFDVMPCRNVSTWNTMITGYAQ 350
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEAL 303
G + EA+ ++MP V W A+
Sbjct: 351 CGKISEAKNLFDKMPKRDPVS-WAAM 375
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y + +A+++FD + RN+S+W+ MI+GYA G+ ++ LF++M P
Sbjct: 311 NAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM----PK 366
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
D ++ + A + + E F +M+ + G
Sbjct: 367 RDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGG 400
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +++L +C L +E GK+VH S + ++N L+ MY KC A KVFD +
Sbjct: 70 VIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 129
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ +W +I GYA NG+G + L + M +G PD TF+ + AC+ A V+ G
Sbjct: 130 EIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGR 189
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M+ YGI PG EHY +I +LG +G L+EA+E + +M +P VW+AL ++
Sbjct: 190 SYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRV 249
Query: 310 HGDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATN 348
HG+VEL +RA L +L+P A+ + L K+ +
Sbjct: 250 HGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCS 309
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E ++V + S D Y K+ + ++EAGYVPD + LHD+DEE KE L
Sbjct: 310 WIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGL 369
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+A+GL++ PP P+RI KNLRICGDCH A+K +S + R +I+RD+ FHHF
Sbjct: 370 AYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHF 429
Query: 465 RDGKCSCGDYW 475
R+G CSC DYW
Sbjct: 430 REGACSCSDYW 440
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+NN L++MY K A VF+++ +++ SW +++G NG + L LF +MR G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
HPD+ V +ACA ++ G ++ +K+ G +++ +++ + G + +
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIED 121
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A + + M + + W AL
Sbjct: 122 ANKVFDSMEIQDVI-TWTAL 140
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 212/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C + ++ +G+ VH L++++ F +V ++ LI+MY KC + +AR++FD + +
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N +W+ MISGY +G G + L LF M + P TFL V AC+ A VKEG
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M +D+G P EHY ++ +LG AG L +A EF++ MP EP VW AL IH
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHK 416
Query: 312 DVELEDRAEELLGDLDPSK----AIVDKIPLPPRKKQSATNM--LEEKNRVSDYRSTDLY 365
D L A E L +LDP ++ I RK A ++ + +K R++ L
Sbjct: 417 DTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLI 476
Query: 366 -------------------RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ Y ++ L G+M EAG+ +T VLHD++EE KE ++
Sbjct: 477 EIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKV 536
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GLIST P +RIIKNLR+C DCHN K +SKI R ++VRD RFHHF+D
Sbjct: 537 HSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKD 596
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 597 GLCSCGDYW 605
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H V ++ L +Y + AR++FD+ ++ L+SW+ MISG NG
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGL 213
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
+ LF+ M+K +P+ T + +ACA A+ G ++K++ +
Sbjct: 214 TDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNR-FESNVYVST 272
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + G + A E + MP E W A+ + +HG
Sbjct: 273 ALIDMYAKCGSITVARELFDLMP-EKNEVTWNAMISGYGLHG 313
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L + L+ +++G ++ L F V L LI ++ KC +AR +F ++RK+
Sbjct: 36 AVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKK 95
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
+L S + MISG+ NG+ D + LF+++ +G T +
Sbjct: 96 DLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIV 136
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 210/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+FSSL ++C NL + E GK++H + + DV N L+ MY KC + A +F+++
Sbjct: 493 IFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEI 552
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R + SW MI G A +G G L LF QM K G P+ T + V +AC A V E
Sbjct: 553 SWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEAR 612
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F +M+ +GI P EHY ++ +LG G L EA V+ MPF+ + VW AL A+I
Sbjct: 613 RFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARI 672
Query: 310 HGDVELEDRAEELLGDLDPSKA--------------IVDKIPLPPR-------KKQSATN 348
H ++EL A E+L L+P K+ + D + R KK+ +
Sbjct: 673 HKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMS 732
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + RS + Y K+ L ++ AGYVP LHD+++ KE+ L
Sbjct: 733 WIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLL 792
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LA+A+GLI+TPP P+R+ KNLR+C DCH A K +SK+ RE+IVRD RFHHF
Sbjct: 793 WHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHF 852
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 853 RDGSCSCGDYW 863
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 114 AIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIE 171
A++ +G+ S +F SS L +C + +++G+++H L D + LI+
Sbjct: 273 ALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLID 332
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY KC + AR VFD + +++ W+ +ISGY+ G + + LF M K G ++ T
Sbjct: 333 MYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTT 392
Query: 232 FLVVFAACASAEA 244
+ + A ++A
Sbjct: 393 LSTILKSTAGSQA 405
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L S ++ ++VH + S + D + N L++ YGKCC A KVF+
Sbjct: 393 LSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCP 452
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L ++ MI+ Y+ G G + L ++ +M+ PD F +F ACA+ A ++G
Sbjct: 453 AEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQG 510
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L++C L+ G +VH L + D N L++MY K A VF ++
Sbjct: 191 LSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP 250
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
K ++ SW+ +I+G + + L L +M P T ACA+ VK G
Sbjct: 251 KPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQ 310
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ +MK D + P + +I + G L +A + MP + + VW ++
Sbjct: 311 LHSALMKMD--MEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVI-VWNSI 361
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ +Y KC R+ARK+ + +L SW +ISGY NG+G + L+ + +M G ++
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 230 ETFLVVFAACASAEAVKEG 248
TF V C+ ++ G
Sbjct: 149 FTFSSVLKGCSLTRNLELG 167
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 208/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S+L++C ++++GK++H L S F V L++MY KC + + KVF +
Sbjct: 79 TLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAM 138
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN SW MI+ A +GQG + L LF++M G D TF+ V AC+ A +KE
Sbjct: 139 ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESL 198
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M DY I P HY + +G AG L +AEE + MPF P W+ L N +I
Sbjct: 199 EFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVTWKTLLNACRI 258
Query: 310 HGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPRKKQSATN---------- 348
H E + ELL L P A ++ R ++S T+
Sbjct: 259 HSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSMTDRGLKKVPGKS 318
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN+V ++ + D ++ ++ L G+MREAGYVP+T+ VLH ++EE KE+ +
Sbjct: 319 FIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLI 378
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GLI+TPP PL I+KNLR+C DCH A K+++KI+ R ++VRD RFHHF
Sbjct: 379 GLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHF 438
Query: 465 RDGKCSCGDYW 475
DG+CSC DYW
Sbjct: 439 EDGQCSCKDYW 449
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L N L+ MY +C + ARKVFD + + SW MI+ N + + L LF +M G
Sbjct: 13 LENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRMNLEG 72
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
P T V ACA + A+K G
Sbjct: 73 IPPTSVTLASVLNACACSGALKVG 96
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 224/381 (58%), Gaps = 28/381 (7%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL-RTSAFVKDVE-LNNKLIEMYGKCCNT 179
A A Y + S +L +C +L S+ MGK++H + R + V + N LI+MY KC +
Sbjct: 507 AVAPNAYTI-SCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDV 565
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR VFD + KRN SW M+SGY +G+G + L +F++M+K G PD +FLV+ AC
Sbjct: 566 DTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC 625
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + V +G YF+IM++DYG++ +HY +I +L +G L +A + ++ MP EP+ +
Sbjct: 626 SHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAI 685
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPPR-------------- 341
W AL + ++H +VEL + A L + D S ++ I R
Sbjct: 686 WVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKK 745
Query: 342 ---KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHD 394
KK+ + ++ K + + RS L Y ++ L G+++ GYVP+T + LHD
Sbjct: 746 SGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHD 805
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+D+E K L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +SKIV E+I
Sbjct: 806 VDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEII 865
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD+ RFHHF++G CSCG YW
Sbjct: 866 VRDSSRFHHFKNGSCSCGGYW 886
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +LK++ K +H + D + N LI+ Y KC + + A VF+ + ++
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW+ M++GY +G+ LF+ MRK D T+ V A A +E F+
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
M YG P I+++ S G L + E
Sbjct: 385 QMIL-YGSEPNSVTIISLLSACASLGALSQGME 416
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVK------------DVELNNKLIEMYGKCCNTR 180
SLL +C +L ++ G H + D+ ++N LI+MY KC + +
Sbjct: 400 SLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFK 459
Query: 181 LARKVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVF 236
AR +F+ + R+RN+ +W +MI GYA G D L LF +M + P+ T +
Sbjct: 460 AARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCIL 519
Query: 237 AACASAEAVKEG 248
ACA +++ G
Sbjct: 520 MACAHLSSLRMG 531
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+EG++ AI + A D F+ L +CG L S G H L+ + F +V
Sbjct: 126 EEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVF 185
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLS---SWHLMISGYAANGQGADGLMLFEQM- 220
+ N L+ MY + + A VFD++ ++ + SW+ +++ + L LF +M
Sbjct: 186 VCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMT 245
Query: 221 -----RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI--EHYI--AI 271
+ T D + + + ACAS +A+ + EI + Y I G + ++ A+
Sbjct: 246 TIVHEKATNERSDIISIVNILPACASLKALPQT---KEI--HSYAIRNGTFADAFVCNAL 300
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
I G + +A M F+ V W A+
Sbjct: 301 IDTYAKCGSMKDAVNVFNVMEFKDVVS-WNAM 331
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 226/396 (57%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASA--GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+ Q SA G FSS++ +C +L ++ +GK++H + F +++
Sbjct: 284 QNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + L++MY KC N + ARK+FD++ + SW +I G+A +G G + + LFE+M++ G
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 403
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ F+ V AC+ V E + YF M YG+ +EHY A+ +LG AG L EA
Sbjct: 404 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 463
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--AIV--------- 333
+F+ +M EPT VW L + +H ++EL ++ E + +D A V
Sbjct: 464 YDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASN 523
Query: 334 ------DKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQM 379
K+ L RK K+ A + +E KN+ + S D ++ +K + QM
Sbjct: 524 GRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQM 583
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ GYV DT VLHD+DEE K + L HSERLA+A+G+I+T P +R+ KN+RIC DCH
Sbjct: 584 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 643
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +SKI RE+IVRDN RFHHF G CSCGDYW
Sbjct: 644 VAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G +A+ + + ++ D F SS+L + GK +H + DV
Sbjct: 183 QSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVY 242
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + L++MY K + +VF L +R+ SW+ +++GY NG+ + L LF QM
Sbjct: 243 IGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAK 302
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P F V ACA + G L+ +++ +G I A++ + G++
Sbjct: 303 VRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--RNIFIASALVDMYSKCGNIQA 360
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + +RM V W A+ +HG
Sbjct: 361 ARKIFDRMNLHDEVS-WTAIIMGHALHG 387
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
++VF S+L SC + + G+ VH + D+ N L+ MY K RKVF+
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ ++++ S++ +I+GYA +G D L + +M + PD T
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTL 209
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 226/396 (57%), Gaps = 28/396 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G EAIE S + D +S + +C + S+E+ + + E + S F DV
Sbjct: 352 KNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVI 411
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+N LI+ Y KC + +AR VFD++ +++ W M+ GY +GQG + ++LF MR+ G
Sbjct: 412 VNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAG 471
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ + AC ++ V+EG+ F M+ DYGI P +HY ++ +LG AGHL A
Sbjct: 472 VSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDLLGRAGHLDRA 530
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
FV MP EP V VW AL + +IH V L + A E L LDP
Sbjct: 531 YNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASS 590
Query: 332 ----IVDKIPLPPRKK----QSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
V K+ + R+K +++E ++ +++ D +E+++ L ++
Sbjct: 591 CLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRL 650
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+EAG+VP T VLHD++ E E+ L HSERLAIAYGLISTPP LRI KNLR C +CH
Sbjct: 651 KEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCH 710
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK++SK+V RE++VRD RFHHF+DG CSCGDYW
Sbjct: 711 AAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G AIE + A D FS +L +C L ++EMG+RVH + F DV
Sbjct: 150 RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVF 209
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L+ +Y KC A VF +L R + SW +ISGYA NGQ + L +F +MRKT
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV--PGIEH----YIAIIKVLGSA 278
PD + V A E ++ G K+ +G V G+E I++ +
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHG-------KSIHGCVIKMGLECEFDLLISLTSLYAKC 322
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE--LEDRAEELLGDLDPSKAIVDKI 336
GH++ A F ++ P++ W A+ I G V+ + A EL + D I
Sbjct: 323 GHVMVARLFFNQVE-NPSLIFWNAM-----ISGYVKNGYAEEAIELFRLMKSKNIRPDSI 376
Query: 337 PLPPRKKQSA-TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDI 395
+ A LE + +Y S +R + L + G V R+V I
Sbjct: 377 TVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRI 436
Query: 396 DEE 398
++
Sbjct: 437 PDK 439
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L + +++ +E GK +H + + +L L +Y KC + +AR F+Q+
Sbjct: 279 SVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENP 338
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----E 247
+L W+ MISGY NG + + LF M+ PD T AACA +++ +
Sbjct: 339 SLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMD 398
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ +ND + ++I G + A +R+P + V VW A+
Sbjct: 399 EYISMSEFRNDVIV------NTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMMVGY 451
Query: 308 QIHG 311
+HG
Sbjct: 452 GLHG 455
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 221/370 (59%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL +C + +E GK VH + S N L++MY K + ARK+FD+L
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR++ SW+ +++ YA +G G + + FE+MR+ G P++ +FL V AC+ + + EG+
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y+E+MK D GIVP HY+ ++ +LG AG L A F+E MP EPT +W+AL N ++H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 311 GDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNM 349
+ EL A E + +LDP + + K+ KK+ A +
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 350 LEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N + + + D + E K + + +++E GYVPDT +V+ +D++ +E LQ
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 563
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE++A+A+ L++TPP + I KN+R+CGDCH AIK+ SK+VGRE+IVRD RFHHF+
Sbjct: 564 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 624 DGNCSCKDYW 633
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++LL C K + G+ VH + S F D+ + N L+ MY KC + ARKVF+++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+R+ +W +ISGY+ + + D L+ F QM + G P++ T V A A+
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G ++H F +V + + L+++Y + A+ VFD L RN SW+ +I+G+A
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
L LF+ M + G P ++ +F AC+S +++G +++ ++K+ +V
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ++ + +G + +A + +R+ V W +L HG
Sbjct: 300 GN--TLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG 342
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 226/395 (57%), Gaps = 27/395 (6%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
C E VR E M +D Y S++ SC NL S+E G + H L S + + +
Sbjct: 353 CSEEAVRVFSE-MQRDGIDPDDY-TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITV 410
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N L+ +YGKC + A ++FD++ + SW ++SGYA G+ + + LFE+M G
Sbjct: 411 SNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGV 470
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD TF+ V +AC+ A V++G YF M+ D+GIVP +HY +I + +G L EAE
Sbjct: 471 KPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAE 530
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------SKA 331
EF+++MP P W L + ++ GD+E+ A E L ++DP +K
Sbjct: 531 EFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKG 590
Query: 332 IVDKIPLPPR-------KKQSATNMLEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMR 380
+++ R KK+ + ++ KN+V +D +S +G YEK++ LN +M
Sbjct: 591 QWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKML 650
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
E GY PD VLHD+ + K + +HSE+LAIA+GLI P MP+RI+KNLR+C DCHN
Sbjct: 651 EEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHN 710
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K +SKI GR+++VRD RFH F DG CSCGD+W
Sbjct: 711 ATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +CG L ++E GK++H + + + +V + + L++MY KC + +LA VF ++
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW +I GY NG + + +F +M++ G PD T V ++CA+ +++EG
Sbjct: 334 TCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGA 393
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-R 304
+ + +V G+ HYI A++ + G G + +A + M F V W AL
Sbjct: 394 QFHCL-----ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALVS 447
Query: 305 NFAQIHGDVELEDRAEELLG 324
+AQ E D E++L
Sbjct: 448 GYAQFGRAKETIDLFEKMLA 467
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
+G A+A G S L+D + + KR + + + K+V + N +I +C
Sbjct: 169 LGFGANAFVG----SPLVDMYAKMSLVGDAKRAFDEVDS----KNVVMYNTMITGLLRCK 220
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
AR++F+ + R+ +W M++G+ NG ++ L +F +MR G D+ TF +
Sbjct: 221 MVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILT 280
Query: 238 ACASAEAVKEG 248
AC + A+++G
Sbjct: 281 ACGALSALEQG 291
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 208/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S+L++C ++++GK++H L S F V L++MY KC + + KVF +
Sbjct: 192 TLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAM 251
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN SW MI+ A +GQG + L LF++M G D TF+ V AC+ A +KE
Sbjct: 252 ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESL 311
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M DY I P HY + +G AG L +AEE + MPF P W+ L N +I
Sbjct: 312 EFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRI 371
Query: 310 HGDVELEDRAEELLGDLDPSKAIV---------------DKIPLPP------RKKQSATN 348
H E + ELL L P ++ D++ + KK +
Sbjct: 372 HSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKS 431
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN+V ++ + D ++ ++ L G+MREAGYVP+T+ VLH ++EE KE+ +
Sbjct: 432 FIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLI 491
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GLI+TPP PL I+KNLR+C DCH A K+++KI+ R ++VRD RFHHF
Sbjct: 492 GLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHF 551
Query: 465 RDGKCSCGDYW 475
DG+CSC DYW
Sbjct: 552 EDGQCSCKDYW 562
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+E G+R+H L F + N L+ MY KC AR +F+ + +R + SW MI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 204 YAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
YA +G+G + L+LF +MR G P+ TF VF AC E +++G
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQG 106
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 109 GKVREAI---EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK--DV 163
G+ +EA+ M D F+ + ++CG ++ +E G+ +H L S +K +
Sbjct: 65 GRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNA 124
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L N L+ MY +C + ARKVFD + + SW MI+ N + + L LF +M
Sbjct: 125 ILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLE 184
Query: 224 GPHPDKETFLVVFAACASAEAVKEG 248
G P T V ACA + A+K G
Sbjct: 185 GIPPTSVTLASVLNACACSGALKVG 209
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 217/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS L +C ++ ++E+GK++H L + + N L+ MY KC + A +F ++
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ MI+GY+ +G G L FE M++ G PD T + V +AC+ V +G
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M DYG++P +HY ++ +LG AG L +A ++ MPFEP +W L +++H
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATNM 349
G+ EL + A + + ++P + V K+ + R KK +
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+ + D + E + ++ L+ +M++AGYV T VLHD++EE KE+ ++
Sbjct: 652 IEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVR 711
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLA+AYG++ P+R+IKNLR+C DCHNAIK M++I GR +I+RDN RFHHF+
Sbjct: 712 YHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFK 771
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 772 DGSCSCGDYW 781
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+EM K + +++ ++V N +I Y +C A+ +FD++ KR+ SW MI+G
Sbjct: 328 MEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY--G 260
Y+ +G + L LF QM + G ++ +F + CA A++ G L+ ++K Y G
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDR 318
G A++ + G + EA + + M + V W + HG E+ R
Sbjct: 444 CFVG----NALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEVALR 496
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N +I+ Y + N AR++F+ + +R++ SW+ M+SGYA NG D +F++M
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + +A ++E + F+ +N + +V + ++
Sbjct: 184 ----PEKNDVSWNALLSAYVQNSKMEEACMLFKSREN-WALVS----WNCLLGGFVKKKK 234
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
++EA +F + M V + +AQ G +D ++ + D+ P+
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQS--------------GKIDEARQLFDESPV 278
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+DV N +I Y + AR++FD+ +++ +W M+SGY N + LF++
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP--GIEHYIAIIKVLGS 277
M P ++ ++ + A E + E+ K + ++P + + +I
Sbjct: 307 M----PERNEVSWNAMLAGYVQGERM-------EMAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 278 AGHLIEAEEFVERMP-------------FEPTVEVWEALRNFAQI 309
G + EA+ ++MP + + +EALR F Q+
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 220/373 (58%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS+L +C L +E+G+ VH L + +++ + + L+++YGKC + A +VF ++
Sbjct: 314 MISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREM 373
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRK--TGPHPDKETFLVVFAACASAEAVKE 247
+RNL +W+ MI GYA G L LF++M G T + V +AC+ A AV+
Sbjct: 374 PERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVER 433
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G FE M+ YGI PG EHY ++ +LG +G + A EF++RMP PT+ VW AL
Sbjct: 434 GLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGAC 493
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLEE----------- 352
++HG +L A E L +LDP + + + + + AT + +E
Sbjct: 494 KMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVG 553
Query: 353 ------KNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEK 402
KNRV +++ D + + +++ L G+M++AGYVPD L D++EE K
Sbjct: 554 YSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKAS 613
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ YHSE++A+A+GLI+ P +P+RI KNLRIC DCH+AIK +SKIVGRE+IVRDN RFH
Sbjct: 614 EVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFH 673
Query: 463 HFRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 674 RFKDGWCSCKDYW 686
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 107 KEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
++G+ +AI +++ D +A F + L++C ++ S+E+G+++H + S + +D
Sbjct: 187 QDGRCLDAIAAFKKFLCVDGEPNA--ITFCAFLNACADIVSLELGRQLHGFIVRSRYRED 244
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLR--KRNLSSWHLMISGYAANGQGADGLMLFEQM 220
V + N LI+ YGKC + + VF ++ +RN+ SW +++ N + M+F Q
Sbjct: 245 VSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQA 304
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLG 276
RK P V +ACA ++ G + + +E I A++ + G
Sbjct: 305 RKE-VEPTDFMISSVLSACAELGGLELGRSVHAL-----ALKACVEENIFVGSALVDLYG 358
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
G + AE+ MP E + W A+ GDV++
Sbjct: 359 KCGSIEYAEQVFREMP-ERNLVTWNAMIGGYAHLGDVDM 396
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + + +L GK++H L + DV + +MY K AR +FD++
Sbjct: 112 FPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMP 171
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK---- 246
RNL++W+ +S +G+ D + F++ P+ TF ACA +++
Sbjct: 172 HRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQ 231
Query: 247 -EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
GF+ + D + G +I G G ++ +E R+
Sbjct: 232 LHGFIVRSRYREDVSVFNG------LIDFYGKCGDIVSSELVFSRI 271
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
++ S L+S +S +G+ VH +LRT L N L+ MY K A+ V
Sbjct: 8 NLLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLS 67
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R + +W +ISG N + L+ F MR+ P+ TF VF A AS
Sbjct: 68 LTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASAS 121
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 216/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C L ++ GK +H+ + + N LI+MYG+C + + +R++FD + +R
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 664
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L SW++MIS Y +G G D + LF+Q R G P+ TF + +AC+ + ++EG+ YF
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 724
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++MK +Y + P +E Y ++ +L AG E EF+E+MPFEP VW +L +IH +
Sbjct: 725 KMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCN 784
Query: 313 VELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSA----------------TNMLE 351
+L + A L +L+P + + + R + +A + +E
Sbjct: 785 PDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIE 844
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
K ++ + D L KM+ L ++E GYVPDT +VL D+DE+ KE +L H
Sbjct: 845 VKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGH 904
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE++A+A+GLIST PLRIIKNLR+CGDCH+A K +SK+ R++I+RDN RFHHF DG
Sbjct: 905 SEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDG 964
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 965 VCSCGDYW 972
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 30/305 (9%)
Query: 106 CKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C G E I+ Y+ + + VF + +C LK+ +GK V++ + + F +
Sbjct: 166 CGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 225
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ +++M+ KC +AR+ F+++ +++ W++M+SGY + G+ L M+ +
Sbjct: 226 CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLS 285
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G PD+ T+ + + A + +E YF M P + + A+I G+ E
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345
Query: 284 AEEFVERMPFEP----TVEVWEA---------LRNFAQIHGDVELEDRAEELLGDLDPSK 330
A +M E ++ + A LR+ +IHG + EEL DL
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC---IKVEELDSDLLVGN 402
Query: 331 AIVD------KIPLPPRKKQSATNMLEEKNRVSDYRSTDLY--RGEYEKMKGLNGQMREA 382
++VD + + RK M+++ + VS Y RG +E+ L +M+
Sbjct: 403 SLVDYYAKCRSVEVARRK----FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQ 458
Query: 383 GYVPD 387
G PD
Sbjct: 459 GIEPD 463
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 109 GKVREAIEY------MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
G + A+E+ MG D + + S L +CG ++++++GK +H + +
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTT----ISGALAACGQVRNLKLGKEIHGYVLRNHIELS 533
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + LI MY C + +A VF +L R++ W+ +IS A +G+ + L L +M
Sbjct: 534 TGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL 593
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE--HYI--AIIKVLGSA 278
+ + T + AC+ A+++G EI + + I G++ ++I ++I + G
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQG---KEI--HQFIIRCGLDTCNFILNSLIDMYGRC 648
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + ++ + MP V W + + +HG
Sbjct: 649 GSIQKSRRIFDLMPQRDLVS-WNVMISVYGMHG 680
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
++++S+L C L ++ +G +VH L + L ++L+E+Y + AR++FD+
Sbjct: 90 EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 149
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN+ SW ++ Y G + + LF M G PD F VF AC+ + + G
Sbjct: 150 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209
Query: 249 FLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ DY + G E +I+ + G + A F E + F+ V +W +
Sbjct: 210 KDVY-----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD-VFMWNIM 262
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 132 SSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S + +C NL + G+ +H ++ D+ + N L++ Y KC + +AR+ F ++
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 425
Query: 191 KRNLSSWHL-----------------------------------MISGYAANGQGADGLM 215
+ +L SW+ +++G+ G G L
Sbjct: 426 QTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALE 485
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
F++M G P+ T AAC +K G
Sbjct: 486 FFQRMHSMGMDPNTTTISGALAACGQVRNLKLG 518
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 221/399 (55%), Gaps = 39/399 (9%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L + +EG V +A Y+ S+L +C + ++E K VH + V
Sbjct: 524 FLQMLREGIVPDATTYV--------------SILSACASTGALEWVKEVHSHAVNAGLVS 569
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ + N L+ MY KC + AR+VFD + +R++ SW +MI G A +G+G D L LF +M+
Sbjct: 570 DLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMK 629
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G P+ +F+ V +AC+ A V EG F + DYGI P +EHY ++ +LG AG L
Sbjct: 630 LEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQL 689
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------- 331
EA+ F+ MP EP W AL +G++E+ + A + L P A
Sbjct: 690 EEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIY 749
Query: 332 ---------IVDKIPLPPR--KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
++ + + R +K+ + +E N++ + D E Y K+K L
Sbjct: 750 AATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLI 809
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
+++ GYVPDTR VL + D+E KE+AL HSE+LAI YGL+ TP R P+R+ KNLR+C
Sbjct: 810 KRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCS 869
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH A K +SK+ GRE++ RD KRFHHF+DG CSCGDYW
Sbjct: 870 DCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L + +++E K VH + V D+ + N L+ MY KC NT A++VFD +
Sbjct: 439 FVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMV 497
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+RN+++W +MISG A +G G + LF QM + G PD T++ + +ACAS A++
Sbjct: 498 ERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L +C + S++ GK++H + S F DV + L+ MY KC + A+ +FD++
Sbjct: 33 YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMV 92
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+RN+ SW +MI G A G+G + F QM++ G P+ T++ + A ASA A++
Sbjct: 93 ERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALE 148
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S + S G L+ + K VH+ + F+ D+ + N LI MY KC + AR VFD +
Sbjct: 241 ASAITSTGALEWV---KEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF---AACASAEAVKE 247
R++ SW+ MI G A NG G + +F +M++ G PD T+L + + + E VKE
Sbjct: 298 RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ SLL++ + + E K VH+ V D+ + + + MY +C + A+ +FD+L
Sbjct: 338 YLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLA 397
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA---VKE 247
RN+++W+ MI G A G + L LF QMR+ G PD TF+ + +A EA VKE
Sbjct: 398 VRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKE 457
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
Y D G+V + A++ + G+ + A++ + M E V W + +
Sbjct: 458 VHSY----AIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGL 511
Query: 308 QIHG 311
HG
Sbjct: 512 AQHG 515
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L++ + ++E K VH + D+ + N L+ MY K + AR VFD +
Sbjct: 134 YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMV 193
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-----SAEAV 245
+R++ SW +MI G A +G+G + LF QM + G P+ T+L + A A + E V
Sbjct: 194 ERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWV 253
Query: 246 KE 247
KE
Sbjct: 254 KE 255
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
MI GYA G D + ++ QMR+ G P++ T+L + AC S ++K G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWG 49
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 218/373 (58%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS+L +C L +E+G+ VH L + ++ + + L++MYGKC + A +VF +L
Sbjct: 312 MISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSEL 371
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMR--KTGPHPDKETFLVVFAACASAEAVKE 247
+RNL +W+ MI GYA G L LFE+M G P T + + + C+ AV+
Sbjct: 372 PERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVER 431
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G FE M+ +YGI PG EH+ ++ +LG +G + A EF++ M +PT+ VW AL
Sbjct: 432 GIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGAC 491
Query: 308 QIHGDVELEDRAEELLGDLD----PSKAIVDKIPLPPRKKQSATNMLEE----------- 352
++HG EL A E L +LD + ++ + + + AT + +E
Sbjct: 492 RMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVG 551
Query: 353 ------KNRVSDYRSTDLYR---GEYEKMKG-LNGQMREAGYVPDTRYVLHDIDEEAKEK 402
KNR+ +++ D E + M G L G M+EAGYVPDT L D+++E K
Sbjct: 552 YSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKAS 611
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ YHSE++A+A+GLI+ P +P+RI KNLRICGDCH+AIK +S+IVGRE+IVRDN RFH
Sbjct: 612 EVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFH 671
Query: 463 HFRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 672 RFKDGCCSCKDYW 684
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
F + L++C ++ + +G+++H + + +DV + N LI+ YGKC + A VF+++
Sbjct: 212 FCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIG 271
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++N+ SW M++ N + M+F Q RK P V +ACA ++ G
Sbjct: 272 NRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGR 330
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ + +E I A++ + G G + AE+ +P E + W A+
Sbjct: 331 SVHAL-----AVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIG 384
Query: 306 FAQIHGDVELEDRAEE 321
GD+++ R E
Sbjct: 385 GYAHQGDIDMALRLFE 400
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK++H L + DV + +MY K A +FD++ +RNL++W+ IS
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQ 186
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-----FLYFEIMKNDYGI 261
+ + D ++ F++ P+ TF AC + G F+ K D +
Sbjct: 187 DRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSV 246
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
G +I G G ++ AE R+ V W
Sbjct: 247 ANG------LIDFYGKCGDIVSAEMVFNRIGNRKNVVSW 279
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
++ SLL+S + +G+ +H ++RT L+N L+ MY K A+ V
Sbjct: 7 NLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLS 66
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE---- 243
R + +W +ISG N + L+ F MR+ P+ TF VF A A +
Sbjct: 67 LTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMT 126
Query: 244 -------AVKEGFLY 251
A+K G +Y
Sbjct: 127 GKQIHGLALKGGMIY 141
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 224/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASA--GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+ Q +A G FSS++ +C +L ++ +GK++H + F ++
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + L++MY KC N + ARK+FD++ + SW +I G+A +G G + + LFE+M++ G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ F+ V AC+ V E + YF M YG+ +EHY A+ +LG AG L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--AIV--------- 333
F+ +M EPT VW L + +H ++EL ++ E + +D A V
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 334 ------DKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQM 379
K+ L RK K+ A + +E KN+ + S D +K +K + QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ GYV DT VLHD+DEE K + L HSERLA+A+G+I+T P +R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +SKI RE+IVRDN RFHHF G CSCGDYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L + GK +H + DV + + L++MY K + +VF +L
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R+ SW+ +++GY NG+ + L LF QM P F V ACA + G
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ +++ +G I A++ + G++ A + +RM V W A+ +
Sbjct: 365 LHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHAL 421
Query: 310 HG 311
HG
Sbjct: 422 HG 423
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++L+ +C L ++E GK++H + D + L++MY KC N A +F ++
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMN 663
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+++ W+ MI G A +G + L F +M+ G PD+ TF+ V +AC+ + + +
Sbjct: 664 TRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYK 723
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ M+ YG+ P IEHY ++ L AGH+ EAE+ V MPFE + ++ L N ++
Sbjct: 724 NFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQ 783
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQ---SATNMLEE----------- 352
GD E +R E L +DPS + ++ I + + SA NM++
Sbjct: 784 GDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSW 843
Query: 353 ---KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
KN+V + + D E Y K++ + +++E GYVPDT + L DI+EE KE AL
Sbjct: 844 IDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALS 903
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIAYGL+ TPP LR+IKNLR+CGDCHNAIK +S + RE+++RD RFHHFR
Sbjct: 904 YHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFR 963
Query: 466 DGKCSCGDYW 475
G CSCGDYW
Sbjct: 964 SGICSCGDYW 973
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 13/237 (5%)
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSC 138
H+Q+ D NA + V+ REA+ + A F++ +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVS-------DNYREALRLFSLMHERGEKADQITFANAAKAA 510
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
G L ++ GK++H ++ F D+ + + +++MY KC + ARKVF+Q+ + +W
Sbjct: 511 GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKN 257
+ISG NG+ L + QMR G PD+ TF + AC+ A+++G ++ IMK
Sbjct: 571 TVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKL 630
Query: 258 DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ P + +++ + G++ +A RM +V +W A+ HG+ E
Sbjct: 631 NCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMN-TRSVALWNAMIVGLAQHGNAE 684
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +L +E+GK++H + + + V + N I MY K + AR++F Q+++ +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
L SW+ +ISG A +G L LF + ++G PD+ T V AC+S E
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLE 412
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK--RNLSSWHLMISG 203
+GKR H ++ TS D + N LI MY KC + ARK+FD + R+L +++ +++
Sbjct: 31 LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 204 YAANGQGAD------GLMLFEQMRKTGPHPDKETFLVVFAAC------ASAEAVKEGFLY 251
YA G+ D +F +R++ + T +F C +++EA++
Sbjct: 91 YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQ----- 145
Query: 252 FEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
Y + G++ + A++ + + EA +RMP V +W +
Sbjct: 146 ------GYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVV-LWNVM 194
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 132 SSLLDSCGNLK-SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C +L+ S +G++VH + V D ++ LI++Y K A +F
Sbjct: 402 TSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD 461
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+L+SW+ M+ G+ + + L LF M + G D+ TF
Sbjct: 462 GFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITF 503
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + L+ +Y K R AR +FD++ R++ W++M+ Y G G + L LF
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH 215
Query: 222 KTGPHPD 228
++G PD
Sbjct: 216 RSGLRPD 222
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 225/409 (55%), Gaps = 27/409 (6%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH 151
Q+ + +V + G+ REA+E + + D F S+L++C + S+ GK +H
Sbjct: 528 QITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH 587
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
DV + N L MY KC + AR++FD + R+ SW+ M+ YA +G+
Sbjct: 588 SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESE 647
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ L L +M + G + TF+ V ++C+ A + EG YF + +D GI EHY +
Sbjct: 648 EVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCL 707
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--- 328
+ +LG AG L EAE+++ +MP EP + W +L ++ D++ A L +LDP
Sbjct: 708 VDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNS 767
Query: 329 SKAIVDKIPLPPR------------------KKQSATNMLEEKNRVSDYRSTDLYRGE-- 368
S ++V R KK + ++ KN+V ++R D
Sbjct: 768 SASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAA 827
Query: 369 --YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPL 426
Y+K++ L MREAGYVPDT+ VLHD+DEE KE L YHSE+LAIA+GLISTP L
Sbjct: 828 EIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSL 887
Query: 427 RIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I KNLR+C DCH A K +SKI GRE++VRDN RFHHFRDG CSC DYW
Sbjct: 888 HIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 17/277 (6%)
Query: 49 ATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTG------HSQNTNDPLR-----GNAQLES 97
A NP+ ++ + V++ + +S E + GT ++ D + L +
Sbjct: 270 ACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLIT 329
Query: 98 LDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLR 155
+ + G EA+ Y M Q F SLL+ +E R+H L+
Sbjct: 330 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 389
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ N L+ +YG+C + AR VFDQL NL SW+ MI Y + D L
Sbjct: 390 EHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQ 449
Query: 216 LFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF M++ G PD+ F+ + AC + ++ + ++ G P ++ +++ +
Sbjct: 450 LFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQ--TSLVNM 507
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
AG L AE ++ M E + W L N +HG
Sbjct: 508 YAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHG 543
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L+S + ++ GK +H +R S DV +N L+ Y KC + ARKVFD +
Sbjct: 163 FLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP 222
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ MIS Y+ + + + +F++M++ G D+ TFL + AC + E ++ G
Sbjct: 223 CRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHG 280
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+LD+C N ++++ GK V E + ++F D+ + LI MY +C + A +VF +++
Sbjct: 264 FLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK 323
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ NL +W +I+ +A +G + L F M++ G P++ TF+ + + ++E
Sbjct: 324 QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE-LS 382
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++G+ A++ V G +A +++ P + W ++
Sbjct: 383 RIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSM 434
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY +C + A F ++R RN+ SW++MIS Y++ + L LF M G P+ T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 232 FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ V +C S +++G L + + G A++ + G G L++A+ E M
Sbjct: 61 LVAVLNSCGSFRELRDGIL-VHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 292 PFEPTVEVWEALRNFAQIHG 311
E V W A+ + G
Sbjct: 120 A-EKNVVTWNAMLGVYSLQG 138
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L+SCG+ + + G VH L F ++ + L+ MYGKC A+ VF+++ ++
Sbjct: 63 AVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEK 122
Query: 193 NLSSWHLMISGYAANGQGAD-GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
N+ +W+ M+ Y+ G + LF +M G + TFL V + +A+++G F+
Sbjct: 123 NVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFI 182
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + ++++ + + A++ G L +A + + MP +V W ++
Sbjct: 183 HSCVRESEHSLDVFVN--TALVNTYTKCGSLTDARKVFDGMPCR-SVGTWNSM 232
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L +C K VH+ + S + L+ MY K +A + ++
Sbjct: 466 FMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD 525
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ +++W+++I+GYA +G+ + L +++++ DK TF+ V AC S+ ++ EG
Sbjct: 526 EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG-- 583
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
M + + G++ + A+ + G + A + MP V L+ +
Sbjct: 584 ---KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAY 640
Query: 307 AQIHGDVE 314
AQ HG+ E
Sbjct: 641 AQ-HGESE 647
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 217/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++E+GK + + ++ VEL N LI+M+ KC + A KVF +++ R
Sbjct: 338 SVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVR 397
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW MI G A +G+G + +++F++M + G PD F+ V +AC+ + V +G YF
Sbjct: 398 TIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYF 457
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+N + IVP IEHY ++ +L AG + EA EFV MP EP +W ++ G+
Sbjct: 458 NTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGE 517
Query: 313 VELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNMLE 351
++L + + L +PS + + + + +K + M+E
Sbjct: 518 LKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIE 577
Query: 352 EKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + ++ +S D Y+ YE ++ + +++ AGYVP T VL DIDEE KE AL H
Sbjct: 578 MNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRH 637
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+ L+STPP P+RI+KNLR+C DCH+A K +SK+ RE++VRD RFHHF++G
Sbjct: 638 SEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNG 697
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 698 LCSCGDFW 705
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN-----TRLARKV 185
F +L +C + +E+G VH + F +D + N L+ MY CC A+KV
Sbjct: 230 FPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKV 289
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD+ ++ +W MI GYA G A + LF +M+ TG PD+ T + V +ACA A+
Sbjct: 290 FDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGAL 349
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ G + E I+ +E A+I + G + A + M T+ W ++
Sbjct: 350 ELG-KWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVR-TIVSWTSMIV 407
Query: 306 FAQIHG 311
+HG
Sbjct: 408 GLAMHG 413
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +CG+L ++ +G+R+H+ + ++ L N L++MY KC AR VFD++R
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMR 368
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW M+S Y +GQG D + LF +M +G +PD F+ V +AC+ + +G
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF +M YGIVP IEH+ ++ + G AG + EA F+++MP EP VW AL + ++H
Sbjct: 429 YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488
Query: 311 GDVELEDRAEELLGDLDP-------------SKAIVDKIPLPPR--------KKQSATNM 349
+++ A +LL L P +KA + K + R KK +
Sbjct: 489 SKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISN 548
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +V + + D Y + Y ++ L G+M+E GY+P T LHD++ E KE L
Sbjct: 549 VELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLA 608
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAI + +++T P+RI KNLR+CGDCH AIK++SKIV R +IVRD RFHHF
Sbjct: 609 IHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFS 668
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 669 NGICSCGDYW 678
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L ++ +G +VH+ + ++ + N L+ MYGKC R ARKV DQ+
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
R++ SW+ M++GYA +GQ D L + ++M + D T
Sbjct: 200 YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D L KL+ Y T +AR +FD+ ++N+ +++MI Y N + L +F+ M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGS 277
+PD TF V AC+ + ++ G + +D + G++ + A++ + G
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVG-----LQVHDAIVKVGLDTNLFIGNALVAMYGK 184
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
G L EA + +++MP+ V + +AQ
Sbjct: 185 CGCLREARKVLDQMPYRDVVSWNSMVAGYAQ 215
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N + +F+++ K+NL SW++MI+ Y N + + LF QM + G PD T +
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314
Query: 238 ACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
AC A+ G L+ I K + + P + A++ + G L EA + ++M
Sbjct: 315 ACGDLSALFLGRRLHKYIEKGN--LRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372
Query: 297 VEVWEAL 303
V W ++
Sbjct: 373 VS-WTSM 378
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +CG+L ++ +G+R+H+ + ++ L N L++MY KC AR VFD++R
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMR 368
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW M+S Y +GQG D + LF +M +G +PD F+ V +AC+ + +G
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF +M YGIVP IEH+ ++ + G AG + EA F+++MP EP VW AL + ++H
Sbjct: 429 YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488
Query: 311 GDVELEDRAEELLGDLDP-------------SKAIVDKIPLPPR--------KKQSATNM 349
+++ A +LL L P +KA + K + R KK +
Sbjct: 489 SKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISN 548
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +V + + D Y + Y ++ L G+M+E GY+P T LHD++ E KE L
Sbjct: 549 VELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLA 608
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAI + +++T P+RI KNLR+CGDCH AIK++SKIV R +IVRD RFHHF
Sbjct: 609 IHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFS 668
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 669 NGICSCGDYW 678
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L ++ +G +VH+ + ++ + N L+ MYGKC R ARKV DQ+
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
R++ SW+ M++GYA +GQ D L + ++M + D T
Sbjct: 200 YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D L KL+ Y T +AR +FD+ ++N+ +++MI Y N + L +F+ M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGS 277
+PD TF V AC+ + ++ G + +D + G++ + A++ + G
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVG-----LQVHDAIVKVGLDTNLFIGNALVAMYGK 184
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
G L EA + +++MP+ V + +AQ
Sbjct: 185 CGCLREARKVLDQMPYRDVVSWNSMVAGYAQ 215
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N + +F+++ K+NL SW++MI+ Y N + + LF QM + G PD T +
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314
Query: 238 ACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
AC A+ G L+ I K + + P + A++ + G L EA + ++M
Sbjct: 315 ACGDLSALFLGRRLHKYIEKGN--LQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372
Query: 297 VEVWEAL 303
V W ++
Sbjct: 373 VS-WTSM 378
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 218/371 (58%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ +L +C ++ ++E G ++H L + + + N L+ MY KC + A F+++
Sbjct: 454 AFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEM 513
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ SW+ MI+GYA +G G + L +F+ MRKT PD T + V AAC+ + V++G
Sbjct: 514 EERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGI 573
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M D+G+ EHY +I +LG AG L EA ++ MPFEP +W AL ++I
Sbjct: 574 SYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRI 633
Query: 310 HGDVELEDRAEELLGDLDPSKA-----------------IVDKIP--LPPR--KKQSATN 348
H + EL A E + +L+P A VDK+ + R KK +
Sbjct: 634 HRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFS 693
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N+V + D E Y ++ L+ +M++AGYV T VLHD++EE KE L
Sbjct: 694 WIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHML 753
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+AYG++ PP P+R+IKNLR+C DCH A K +S I GR +I+RD+ RFHHF
Sbjct: 754 KYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHF 813
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 814 RDGSCSCGDYW 824
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N ++ Y + AR +F + +++ SW M++ Y+ G + L LF++M
Sbjct: 384 RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ G ++ F V + CA A++ G L+ ++K YG+ + + A++ + G
Sbjct: 444 GRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGN--ALLAMYFKCG 501
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ EA E M E V W + HG
Sbjct: 502 SMEEAHSAFEEME-ERDVVSWNTMIAGYARHG 532
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ Y + A+K+F+++ +R++ SW+ M+SGYA G A+ LF+ P
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFD----VAPI 321
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
D T+ + + A ++E F+ M + + + A++ + EA+E
Sbjct: 322 RDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAV-----SWNAMMAAYVQRRMMEEAKE 376
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
+ MP L +AQ G LD ++AI +P
Sbjct: 377 LFDAMPCRNVASWNTMLTGYAQA--------------GMLDEARAIFGMMP 413
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV N ++ Y + + AR++FD R++ +W ++SGYA NG ML E
Sbjct: 291 RDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNG------MLEEAK 344
Query: 221 RKTGPHPDKE--TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
R PDK ++ + AA ++E F+ M + + ++ A
Sbjct: 345 RVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMP-----CRNVASWNTMLTGYAQA 399
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
G L EA MP + V L ++QI
Sbjct: 400 GMLDEARAIFGMMPQKDAVSWAAMLAAYSQI 430
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 214/372 (57%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSSL+ +CGNL S+ +GK++H + F +V +++ LI+MY KC N +AR++FD++
Sbjct: 276 TFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRI 335
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ ++ SW MI G+A +G + L+LF++M P+ TFL V AC+ A V +G+
Sbjct: 336 QSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGW 395
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M + YGIVP +EH+ A+ LG G L EA F+ M +PT VW L ++
Sbjct: 396 KYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKV 455
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLP----------------------PRKKQSAT 347
H + L + + + DL+P +++ I L +K+ A
Sbjct: 456 HKNTVLAEEVAKKIFDLEP-RSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPAC 514
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E KN+ + + D YE+ + + QM GYVP+T V DI+EE K
Sbjct: 515 SWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSV 574
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAI +G+ISTPP +R++KNLR+C DCH K +SKIVGRE+++RD RFHH
Sbjct: 575 LCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHH 634
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGD+W
Sbjct: 635 FKDGICSCGDFW 646
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G VRE M +D + SS+L + G +H + F DV + +
Sbjct: 159 GLVRE----MWRDGCKPDSF-TLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSS 213
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI+MY C T + KVFD L R+ W+ M++G A NG + L LF +M +G P
Sbjct: 214 LIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPM 273
Query: 229 KETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
TF + AC + ++ G L+ +++ G + ++I + G++ A
Sbjct: 274 PVTFSSLIPACGNLASLLLGKQLHAYVIRG--GFDGNVFISSSLIDMYCKCGNVSIARRI 331
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVE----LEDRAEELLGDLDPS 329
+R+ P + W A+ +HG L DR E LG+L P+
Sbjct: 332 FDRIQ-SPDIVSWTAMIMGHALHGPAREALVLFDRME--LGNLKPN 374
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 124 ASAGYDVFSSL---LDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKL---------- 169
A+A V +SL L SC L +G +H L LR+ AF N L
Sbjct: 51 AAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPP 110
Query: 170 ---IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
EM G RKVFD++ ++++ SW+ ++ G A +G+ + L L +M + G
Sbjct: 111 SHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCK 170
Query: 227 PDKETFLVVFAACASAEAVKEG 248
PD T V A V+ G
Sbjct: 171 PDSFTLSSVLPIFAEGADVRRG 192
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 216/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C L ++ GK +H+ + + N LI+MYG+C + + +R++FD + +R
Sbjct: 362 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 421
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L SW++MIS Y +G G D + LF+Q R G P+ TF + +AC+ + ++EG+ YF
Sbjct: 422 DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 481
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++MK +Y + P +E Y ++ +L AG E EF+E+MPFEP VW +L +IH +
Sbjct: 482 KMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCN 541
Query: 313 VELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSA----------------TNMLE 351
+L + A L +L+P + + + R + +A + +E
Sbjct: 542 PDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIE 601
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
K ++ + D L KM+ L ++E GYVPDT +VL D+DE+ KE +L H
Sbjct: 602 VKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGH 661
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE++A+A+GLIST PLRIIKNLR+CGDCH+A K +SK+ R++I+RDN RFHHF DG
Sbjct: 662 SEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDG 721
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 722 VCSCGDYW 729
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 106 CKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C G E I+ Y+ + + VF + +C LK+ +GK V++ + + F +
Sbjct: 87 CGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 146
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ +++M+ KC +AR+ F+++ +++ W++M+SGY + G+ L +F +M
Sbjct: 147 CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLE 206
Query: 224 GPHPDKETFLVVFAACASAEAVKEG 248
G P+ T +AC + ++ G
Sbjct: 207 GVKPNSITIASAVSACTNLSLLRHG 231
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
++++S+L C L ++ +G +VH L + L ++L+E+Y + AR++FD+
Sbjct: 11 EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 70
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN+ SW ++ Y G + + LF M G PD F VF AC+ + + G
Sbjct: 71 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130
Query: 249 FLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ DY + G E +I+ + G + A F E + F+ V +W +
Sbjct: 131 KDVY-----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD-VFMWNIM 183
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 132 SSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S + +C NL + G+ +H ++ D+ + N L++ Y KC + +AR+ F ++
Sbjct: 216 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 275
Query: 191 KRNLSSWHLM--ISGYAANGQGADGLMLFEQM 220
+ +L SW+ M ++G+ G G L F++M
Sbjct: 276 QTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307
>gi|255578133|ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530566|gb|EEF32444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 548
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 212/344 (61%), Gaps = 21/344 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHE 152
LE LD LCKE KV+EA+E + D+ F L+ CG K+ E K VH+
Sbjct: 202 LEELD----ELCKEKKVKEAVEVLNLLEERRVLVDLPRFLQLMRICGEAKASEEAKVVHD 257
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L V NK++EMYGKC + A VF+++ KRNL++W MI+ A NG G D
Sbjct: 258 HLVRLQSPLAVSTFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGED 317
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
+ LF Q ++ G PD + F+ VF+AC V EG L+FE MK DYGIVP +EH+++I+
Sbjct: 318 AIDLFSQFKQAGLVPDAQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIV 377
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-- 330
+LG+ GHL EA EF+E+MP EP+++VWE+L N ++IHG++EL DR +L+ LD S
Sbjct: 378 DMLGTIGHLDEALEFIEKMPMEPSIDVWESLMNLSRIHGNLELGDRCAKLVELLDASHLN 437
Query: 331 ---------AIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNG 377
A V + KK ++ N+LE ++RV +YR+ D E Y ++GL
Sbjct: 438 EQSKAGLVPAKVSNLTKEKDKKPASQNLLEVRSRVHEYRAGDTSHPETDRIYAMLRGLRA 497
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTP 421
QM+E GY+P+TR+VLHD+D+E KE AL HSERLA AYGL+++P
Sbjct: 498 QMKEHGYIPETRFVLHDVDQECKEDALLSHSERLAAAYGLLTSP 541
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 215/371 (57%), Gaps = 33/371 (8%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDV-ELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ +C L S ++ VH ++ T F + + LI++Y KC + ARKVFD +++R
Sbjct: 215 VIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQER 274
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W MISGY +G G + L LF+QM K PD TF+ + +AC+ + V EG+ F
Sbjct: 275 NIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECF 333
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M D+G+ P EHY ++ +LG AG L EA +F+ERMP P VW AL +IH +
Sbjct: 334 NSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLN 393
Query: 313 VELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSAT----------------NMLE 351
V+L + L DLDP A + + L ++K++ + +++E
Sbjct: 394 VDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIE 453
Query: 352 EKNRVSDYRS-------TDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
KN++ + + TDL E E+ L ++R+ GY PD +VLHD+DEE KE L
Sbjct: 454 IKNKLYAFVAGDRSHPQTDLIYSELER---LMDRIRQEGYTPDINFVLHDVDEETKESML 510
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAI +GL++ P +RI KNLR+CGDCH A K +SK+ GRE++VRD RFHHF
Sbjct: 511 YLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHF 570
Query: 465 RDGKCSCGDYW 475
++G CSC DYW
Sbjct: 571 KNGACSCRDYW 581
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ +C L+ E G R+H+ + + V ++N LI MYGKC L+R+VFD++
Sbjct: 13 FPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMP 72
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+N SW +I + + +G LF QM G P + L A S E
Sbjct: 73 DKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSHE 125
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 120 QDASASAGYDVF------------SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
QD G+ +F ++L++ ++S E V+ ++ + D + +
Sbjct: 88 QDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQS 147
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
M+ +C +ARK+FD + ++L +W I Y + L L +QM G P
Sbjct: 148 AAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFP 207
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
D T L V AC++ + + + I+ + + A+I + G L A +
Sbjct: 208 DAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKV 267
Query: 288 VERMPFEPTVEVWEALRNFAQIHG 311
+ M E + W A+ + +HG
Sbjct: 268 FDGMQ-ERNIITWSAMISGYGMHG 290
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 217/371 (58%), Gaps = 34/371 (9%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L SC L ++++G+ +HE ++ + F + V++N LI+MY KC + A VF + +R+
Sbjct: 243 LSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDT 302
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W MI YA +G G+ + + +M+K PD+ TFL + AC+ V+EG+ YF
Sbjct: 303 QAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHS 362
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M ++YGIVP I+HY +I +LG AG L EA +F++ +P +PT +W L + HG+VE
Sbjct: 363 MTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVE 422
Query: 315 LEDRAEELLGDLDPS-------------------------KAIVDKIPLPPRKKQSATNM 349
+ + + +LD S K +VDK L K +
Sbjct: 423 MAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGAL----KVPGCSS 478
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLH-DIDEEAKEKAL 404
+E N V ++ S D + + L +++ AGYVPDT V + DI++E KE L
Sbjct: 479 IEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVL 538
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LAI YGL++TPP +R++KNLR+C DCHNA K +S I GR++I+RD +RFHHF
Sbjct: 539 RYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHF 598
Query: 465 RDGKCSCGDYW 475
+DGKCSCGDYW
Sbjct: 599 KDGKCSCGDYW 609
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSSLL +C LK++E GK++H L ++ + LI MY C + AR+VFD++
Sbjct: 138 FSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIG 197
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +++ +I+ A N + + L LF +++++G P T LV ++CA A+ G
Sbjct: 198 EPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRW 257
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
E +K + G + Y+ A+I + G L +A + MP T + W A+
Sbjct: 258 IHEYVKKN-----GFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDT-QAWSAMIVA 311
Query: 307 AQIHG 311
HG
Sbjct: 312 YATHG 316
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A ++FD++ + ++ ++ M GYA ++L Q+ +G PD TF + ACA
Sbjct: 88 AHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACAR 147
Query: 242 AEAVKEG 248
+A++EG
Sbjct: 148 LKALEEG 154
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L + L ++ G R+H L + DV + LI++Y KC A +F+ +
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP 434
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+ W+ +I+G +G GA L LF QM++ PD TF+ + AAC+ A V +G
Sbjct: 435 RRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRS 494
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F++M+ YGIVP +HY ++ +LG AG L EA EF++ MP +P VW AL +IH
Sbjct: 495 FFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIH 554
Query: 311 GDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPRK----KQSATNM 349
G+VE+ A + L +LDP VD + R+ K +
Sbjct: 555 GNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSS 614
Query: 350 LEEKNRVSDYRS---TDLYRGEYEKMKGLN---GQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K VS + S T+ + E +GL+ +M+ AGYVPD +VL D++E+ KE+
Sbjct: 615 MEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQI 674
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLAIA+G+I+TPP PL I KNLR+CGDCH+A K +SKI RE+IVRD RFHH
Sbjct: 675 LNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHH 734
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGD+W
Sbjct: 735 FKDGHCSCGDFW 746
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 14/213 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS-----SLLDSCGNLKSIEMG-KRVHELLRTSAF- 159
+ GKV A+E + DV + S + CG+ E+G K VH +R +
Sbjct: 246 QGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD----ELGAKSVHCYVRRRGWD 301
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V D+ N +++MY K A+KVFD L R++ SW+ +I+GY NG + + ++
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361
Query: 220 MRK-TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M G P + TF+ V A + +++G + + G+ + +I +
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQG-MRMHALSIKTGLNLDVYVTTCLIDLYAKC 420
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G L+EA E MP T W A+ +HG
Sbjct: 421 GKLVEAMFLFEHMPRRSTGP-WNAIIAGLGVHG 452
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L LC+ + +A+ +G+ D SS+L C L + +H
Sbjct: 140 LSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGL 199
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++ + N LI++YGK A VF + R+L +W+ +IS G+ A + LF
Sbjct: 200 SGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHG 259
Query: 220 MRKTGPHPDKETFLVVFAACA 240
M ++G PD T + + +A A
Sbjct: 260 MMESGVCPDVLTLVSLASAVA 280
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
LR +V + L+ Y + A +VFD++ +R++ +W+ M+SG N + AD
Sbjct: 93 LRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADA 152
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI--EHYI-- 269
+ L +M G D T V C V G ++ + Y + G+ E ++
Sbjct: 153 VTLLGRMVGEGVAGDAVTLSSVLPMC-----VVLGDRALALVMHVYAVKHGLSGELFVCN 207
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A+I V G G L EA M V W ++
Sbjct: 208 ALIDVYGKLGMLTEAHWVFGGMALRDLV-TWNSI 240
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 214/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +++D+C L + G+ VH+ + S DV L ++ YGKC AR +FD L
Sbjct: 231 FLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLG 290
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+N +W +++ YA NG + + L+ +M + G + TFL + AC+ A +G
Sbjct: 291 KKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVD 350
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+G+VP EHY+ +I +LG +G L +E+ + MP+EP W AL ++H
Sbjct: 351 YFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMH 410
Query: 311 GDVELEDRAEELLGDLDP--------------SKAIVDK-------IPLPPRKKQSATNM 349
GDV+ R EL+ +LDP S +D+ + L KQ +
Sbjct: 411 GDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSS 470
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K+RV ++ + + + +++ L +++EAGYV D R VL D++EE KE+ L
Sbjct: 471 IEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLW 530
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAIA+GLISTPP L I+KNLR+C DCH A+K +SK+VGR+++VRD RFHHF
Sbjct: 531 YHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFE 590
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 591 NGACSCGDYW 600
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
+D+C +L S E G+ VH + D + L+ M+GKC N AR VFD L ++NL
Sbjct: 134 IDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNL 193
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ M++ Y+ N Q + +F M G PD TFL + ACA+ A EG + +
Sbjct: 194 VTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDD 253
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFAQ 308
+ GI + A++ G G L A + + + TV W A L +AQ
Sbjct: 254 ITAS-GIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTV-TWSAILAAYAQ 306
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL C + K++ GKRVH L + D + N LIEMYGKC AR VFDQ++++N
Sbjct: 30 LLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKN 89
Query: 194 --LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ SW+ +I Y NG G + L LF+ M G ++ T + ACAS + +EG +
Sbjct: 90 ADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIV 149
Query: 252 FEI 254
I
Sbjct: 150 HAI 152
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 222/381 (58%), Gaps = 28/381 (7%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL-RTSAFVKDVE-LNNKLIEMYGKCCNT 179
A A Y + S +L +C +L ++ MGK++H + R + V + N LI+MY KC +
Sbjct: 507 AVAPNAYTI-SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDV 565
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR VFD + KRN SW M+SGY +G+G + L +F++M+K G PD +FLV+ AC
Sbjct: 566 DTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC 625
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + V +G YF+IM+ DY +V EHY +I +L G L +A + ++ MP EP+ +
Sbjct: 626 SHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVI 685
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPPR-------------- 341
W AL + ++H +VEL + A L ++ D S ++ I R
Sbjct: 686 WVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKK 745
Query: 342 ---KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHD 394
KK+ + ++ K + + RS L Y ++ L G+++ GYVP+T + LHD
Sbjct: 746 SGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHD 805
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+D+E K L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +SKIV E+I
Sbjct: 806 VDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEII 865
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD+ RFHHF++G CSCG YW
Sbjct: 866 VRDSSRFHHFKNGSCSCGGYW 886
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK----------- 161
+A + M D S + S LL +C +L ++ G +H +
Sbjct: 381 DAFQQMILDGSEPNSVTIIS-LLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439
Query: 162 -DVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFE 218
D+ + N LI+MY KC + + AR +FD + R+RN+ +W +MI GYA G D L +F
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499
Query: 219 QM--RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA--IIKV 274
+M + P+ T + ACA A++ G + + P + +++A +I +
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSV-YFVANCLIDM 558
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
G + A + MP V W ++ + +HG R +E L D
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHG------RGKEALDIFD 604
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D+ S ++L +C +LK++ K +H + D + N LI+ Y KC + A KVF
Sbjct: 258 DIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVF 317
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+ + +++ SW+ M++GY +G LFE MRK D T+ V A A +
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQ 377
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
E F+ M D G P I+++ S G L + E
Sbjct: 378 EALDAFQQMILD-GSEPNSVTIISLLSACASLGALSQGMEI 417
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
KEG + AI + A D F+ L +CG L S G+ +H L+ + F +V
Sbjct: 126 KEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVF 185
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLS---SWHLMISGYAANGQGADGLMLFEQM- 220
+ N L+ MY +C + A VFD++ ++ + SW+ +++ + L LF +M
Sbjct: 186 VCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS 245
Query: 221 -----RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI--EHYI--AI 271
+ T D + + + ACAS +A+ + EI + Y I G + ++ A+
Sbjct: 246 MIVHEKATNERSDIISIVNILPACASLKALPQ---IKEI--HSYAIRNGTFADAFVCNAL 300
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
I G + +A + M F+ V W A+
Sbjct: 301 IDTYAKCGSMNDAVKVFNVMEFKDVVS-WNAM 331
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++L+ + L ++E GK++H + + D + L++MY KC + + A +VF ++
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R + W+ M+ G A +G + L LF M+ G PDK TF+ V +AC+ + E +
Sbjct: 1262 DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAY 1321
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M YGI P IEHY ++ LG AG + EAE + MPF+ + ++ AL +
Sbjct: 1322 KYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRT 1381
Query: 310 HGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSAT---NMLEEKNR------- 355
GD E R + L LDPS + ++ I R+ T NM++ KN
Sbjct: 1382 KGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFS 1441
Query: 356 -----------VSDYRSTDLYRGEYEKMKGLNGQMREAG-YVPDTRYVLHDIDEEAKEKA 403
V D RS YEK++ L ++RE G YVPDT + L D++EE KE+A
Sbjct: 1442 WIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERA 1501
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAIA+GLISTPP +R+IKNLR+CGDCH+AIK +SK+ RE+++RD RFHH
Sbjct: 1502 LYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHH 1561
Query: 464 FRDGKCSCGDYW 475
FR+G CSCGDYW
Sbjct: 1562 FRNGTCSCGDYW 1573
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 12/226 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHE 152
L S + + K K R+A+E+ D ++ + + G L +++ GK++
Sbjct: 1064 LASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQA 1123
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
F D+ +++ +++MY KC + A ++F ++ + + +W MISGY NG
Sbjct: 1124 YAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDH 1183
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI-- 269
L ++ MR +G PD+ TF + A + A+++G ++ ++K DY ++H++
Sbjct: 1184 ALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGT 1239
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFAQIHGDVE 314
+++ + G + +A +M V W A L AQ HG V+
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAMLLGLAQ-HGHVD 1283
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 13/224 (5%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIE 145
P + + + + L G++ AI+ ++ G+D +L + ++
Sbjct: 852 PFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD 911
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G+++H L+ S+F V ++N L+ MY K A K F + +L SW+ MIS YA
Sbjct: 912 LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYA 971
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI--MKNDYGIVP 263
N + + F + + G PD+ T V AC++ + EG YF + + Y I
Sbjct: 972 QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD---EG-EYFTLGSQVHVYAIKC 1027
Query: 264 GI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
GI + ++ A+I + G + EA EF+ ++ + W A+
Sbjct: 1028 GIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAI 1070
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
+ +++GKR H + TS + D L N LI MY KC + AR+VFD+ R+L +W+ +
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 201 ISGYAANGQGA-----DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
++ YA + +G LF +R+ G + T A + GF+
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLT-----LAPLLKLCLLSGFVQVSET 738
Query: 256 KNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW----------- 300
+ Y + G E + A++ + G + +A ++MP E +W
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKAYVENS 797
Query: 301 ---EALRNFAQIH 310
EALR F+ H
Sbjct: 798 FQDEALRFFSAFH 810
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+++ + VH F D+ ++ L+ +Y K AR +FD++ +R+ W++M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 204 YAANGQGADGLMLFEQMRKTGPHPD 228
Y N + L F ++G PD
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFXPD 817
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++L+ + L ++E GK++H + + D + L++MY KC + + A +VF ++
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R + W+ M+ G A +G + L LF M+ G PDK TF+ V +AC+ + E +
Sbjct: 1262 DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAY 1321
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M YGI P IEHY ++ LG AG + EAE + MPF+ + ++ AL +
Sbjct: 1322 KYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRT 1381
Query: 310 HGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSAT---NMLEEKNR------- 355
GD E R + L LDPS + ++ I R+ T NM++ KN
Sbjct: 1382 KGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFS 1441
Query: 356 -----------VSDYRSTDLYRGEYEKMKGLNGQMREAG-YVPDTRYVLHDIDEEAKEKA 403
V D RS YEK++ L ++RE G YVPDT + L D++EE KE+A
Sbjct: 1442 WIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERA 1501
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAIA+GLISTPP +R+IKNLR+CGDCH+AIK +SK+ RE+++RD RFHH
Sbjct: 1502 LYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHH 1561
Query: 464 FRDGKCSCGDYW 475
FR+G CSCGDYW
Sbjct: 1562 FRNGTCSCGDYW 1573
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 12/226 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHE 152
L S + + K K R+A+E+ D ++ + + G L +++ GK++
Sbjct: 1064 LASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQA 1123
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
F D+ +++ +++MY KC + A ++F ++ + + +W MISGY NG
Sbjct: 1124 YAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDH 1183
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI-- 269
L ++ MR +G PD+ TF + A + A+++G ++ ++K DY ++H++
Sbjct: 1184 ALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGT 1239
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFAQIHGDVE 314
+++ + G + +A +M V W A L AQ HG V+
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAMLLGLAQ-HGHVD 1283
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 13/224 (5%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIE 145
P + + + + L G++ AI+ ++ G+D +L + ++
Sbjct: 852 PFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD 911
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G+++H L+ S+F V ++N L+ MY K A K F + +L SW+ MIS YA
Sbjct: 912 LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYA 971
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI--MKNDYGIVP 263
N + + F + + G PD+ T V AC++ + EG YF + + Y I
Sbjct: 972 QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD---EG-EYFTLGSQVHVYAIKC 1027
Query: 264 GI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
GI + ++ A+I + G + EA EF+ ++ + W A+
Sbjct: 1028 GIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAI 1070
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
+ +++GKR H + TS + D L N LI MY KC + AR+VFD+ R+L +W+ +
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 201 ISGYAANGQGA-----DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
++ YA + +G LF +R+ G + T A + GF+
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLT-----LAPLLKLCLLSGFVQVSET 738
Query: 256 KNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW----------- 300
+ Y + G E + A++ + G + +A ++MP E +W
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKAYVENS 797
Query: 301 ---EALRNFAQIH 310
EALR F+ H
Sbjct: 798 FQDEALRFFSAFH 810
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+++ + VH F D+ ++ L+ +Y K AR +FD++ +R+ W++M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 204 YAANGQGADGLMLFEQMRKTGPHPD 228
Y N + L F ++G PD
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFFPD 817
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 212/370 (57%), Gaps = 26/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ +GK VH L+++ +V ++ L++MY KC + AR++FD +
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N+ +W+ MI+GY +G G + L LF +M ++G P TFL + AC+ + V EG
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M N+YG P EHY ++ +LG AG L A EF+ERMP EP VW AL IH
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHK 598
Query: 312 DVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPRK--KQSATNML 350
+ E+ + A + L LDP KA + + RK K ++
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT-RYVLHDIDEEAKEKALQ 405
E ++ + S D + +E ++ L G+MREAGY +T LHD+++E KE +
Sbjct: 659 EIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVN 718
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+GLIST P +RIIKNLR+C DCH A K +SKI R ++VRD RFHHF+
Sbjct: 719 VHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK 778
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 779 NGICSCGDYW 788
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 148 KRVHELLRTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+RV LL + V V N + ++++Y K LARKVFD + +R+ W+ MISG
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ N D + +F M G D T V A A + + G
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG 233
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 11/233 (4%)
Query: 108 EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
E +R ++ + D S +++L + L+ +G + L DV +
Sbjct: 196 EDSIRVFVDML--DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
LI +Y KC + R +FDQ+ + +L S++ MISGY N + + LF ++ +G
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ T + + ++ L + + GI+ A+ V + A +
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRL-IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRA----EELLGDLDPSKAIVDKI 336
+ P E ++ W A+ + +G L DRA +E++ L P+ V I
Sbjct: 373 FDESP-EKSLASWNAMISGYTQNG---LTDRAISLFQEMMPQLSPNPVTVTSI 421
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 215/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++L+ + + ++E G+++H + V D + L++MY KC N A ++F ++
Sbjct: 1210 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 1269
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN++ W+ M+ G A +G + + LF+ M+ G PD+ +F+ + +AC+ A E +
Sbjct: 1270 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 1329
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
Y M NDYGI P IEHY ++ LG AG + EA++ +E MPF+ + + AL +I
Sbjct: 1330 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRI 1389
Query: 310 HGDVELEDRAEELLGDLDPSKA------------------IVDKIPLPPRK---KQSATN 348
GDVE R L L+P + + D + RK K +
Sbjct: 1390 QGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFS 1449
Query: 349 MLEEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ KN V D RS Y+K++ + +RE GYVPDT +VL D+++E KE++L
Sbjct: 1450 WIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSL 1509
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIAYGLISTP +R+IKNLR+CGDCHNAIK +SK+ RE+++RD RFHHF
Sbjct: 1510 YYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHF 1569
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 1570 RDGVCSCGDYW 1580
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+CG L ++ GK++H + F D+ +N+ +++MY KC + A VF+ + + +
Sbjct: 1116 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 1175
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W MISG NG L ++ +MR++ PD+ TF + A + A+++G L+ ++
Sbjct: 1176 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 1235
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
K D P + +++ + G++ +A ++M + +W A+ HG+ E
Sbjct: 1236 KLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 1291
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 128 YDVFSSL--LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
YD + L L + +E+GK+VH + S DV + N L+ MY K AR+V
Sbjct: 902 YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
F+ ++ +L SW+ MIS A + + + LF + G PD T V AC+S
Sbjct: 962 FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS 1017
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL + + ++ +GK H + S D L+N L+ MY KC + AR+VFD +R+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 194 LSSWHLMISGYAA-----NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L +W+ ++ YAA +G +GL LF +R + + T V C + G
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLC-----LNSG 741
Query: 249 FLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE-AL 303
L+ + Y I G+E + A++ + G + +A + M E V +W L
Sbjct: 742 CLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMML 800
Query: 304 RNFAQI 309
+ + Q+
Sbjct: 801 KGYVQL 806
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L C N + + VH DV ++ L+ +Y KC R AR +FD +
Sbjct: 729 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 788
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
R+R++ W++M+ GY G + LF + ++G PD+ + ++
Sbjct: 789 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLIL 835
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 130 VFSSLLDSCGNL-KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+S+L +C +L + + +++H + + D + LI++Y K A +F
Sbjct: 1007 TLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN 1066
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS------- 241
+L+ W+ M+ GY G L LF + K+G D+ T AC
Sbjct: 1067 KDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQG 1126
Query: 242 ----AEAVKEGF 249
A A+K GF
Sbjct: 1127 KQIHAHAIKAGF 1138
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 205/367 (55%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + N+ ++ G+ H F+ DV + + L++MY KC R AR +FD + RN
Sbjct: 295 VLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN 354
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW+ MI GYA +G A+ + LF M+K PD TF V AC+ A +EG YF
Sbjct: 355 VVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFN 414
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M+ +GI P +EHY ++ +LG +G L EA + + MPFEP +W +L +++G+V
Sbjct: 415 EMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNV 474
Query: 314 ELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEE 352
L + A E L L+P A + D++ KK+ + +E
Sbjct: 475 LLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEI 534
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
KN+V + D + EK+ L +M G+ P +VLHD++E+ K+ L HS
Sbjct: 535 KNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHS 594
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A GLIST P PLR+IKNLRICGDCH A+K +S RE+ VRD RFHHF+DGK
Sbjct: 595 EKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGK 654
Query: 469 CSCGDYW 475
CSCGDYW
Sbjct: 655 CSCGDYW 661
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 8/205 (3%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L + G++K + +GK+VH + + D + LI+MYGKC +VF +
Sbjct: 157 SCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSH 216
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++S + +++G + N Q ++ L+LF + G + ++ + A C E
Sbjct: 217 MDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDL 276
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI---EAEEFVERMPFEPTVEVWEALRNFAQ 308
F M++ G+ P ++ + L+ A F R F V V AL +
Sbjct: 277 FRTMQS-IGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYA 335
Query: 309 IHGDVELEDRAEELLGDLDPSKAIV 333
G + R + D PS+ +V
Sbjct: 336 KCG----KARHARTIFDAMPSRNVV 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S L SC + + + +H S +D + + L+ Y + T AR VFD++
Sbjct: 22 LLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRM 78
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
++N+ W +I+GY+A G L EQMR G P+ T+
Sbjct: 79 PEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITW 121
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 212/370 (57%), Gaps = 26/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ +GK VH L+++ +V ++ L++MY KC + AR++FD +
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N+ +W+ MI+GY +G G + L LF +M ++G P TFL + AC+ + V EG
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M N+YG P EHY ++ +LG AG L A EF+ERMP EP VW AL IH
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHK 598
Query: 312 DVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPRK--KQSATNML 350
+ E+ + A + L LDP KA + + RK K ++
Sbjct: 599 NTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT-RYVLHDIDEEAKEKALQ 405
E ++ + S D + +E ++ L G+MREAGY +T LHD+++E KE +
Sbjct: 659 EIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVN 718
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+GLIST P +RIIKNLR+C DCH A K +SKI R ++VRD RFHHF+
Sbjct: 719 VHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK 778
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 779 NGICSCGDYW 788
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 148 KRVHELLRTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+RV LL + V V N + ++++Y K LARKVFD + +R+ W+ MISG
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ N D + +F M G D T V A A + + G
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG 233
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 11/233 (4%)
Query: 108 EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
E +R ++ + D S +++L + L+ +G + L DV +
Sbjct: 196 EDSIRVFVDML--DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
LI +Y KC + R +FDQ+ + +L S++ MISGY N + + LF ++ +G
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ T + + ++ L + + GI+ A+ V + A +
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRL-IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRA----EELLGDLDPSKAIVDKI 336
+ P E ++ W A+ + +G L DRA +E++ L P+ V I
Sbjct: 373 FDESP-EKSLASWNAMISGYTQNG---LTDRAISLFQEMMPQLSPNPVTVTSI 421
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 224/369 (60%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L SC L S+++GK +HE + F K V++N LI+M+ KC + A +F+ +R +
Sbjct: 237 SVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK 296
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W MI YA +GQ + +++FE+MR PD+ TFL + AC+ V+EG YF
Sbjct: 297 DTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYF 356
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M +++GIVP I+HY +++ +LG AGHL +A EF++++P PT +W L H +
Sbjct: 357 SWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 416
Query: 313 VELEDRAEELLGDLDPSKA-----------------IVDKI--PLPPRK--KQSATNMLE 351
+EL ++ E + +LD S VD + + RK K + +E
Sbjct: 417 LELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIE 476
Query: 352 EKNRVSDYRSTDLYRGEYEKM-KGLNGQMRE---AGYVPDTRYVLH-DIDEEAKEKALQY 406
N V ++ S D + K+ + L+ ++E AGYVPDT V+H D+ ++ KE L+Y
Sbjct: 477 VNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLRY 536
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GL++TPP +R++KNLR+C DCH+A K++S I GR++++RD +RFHHF D
Sbjct: 537 HSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFED 596
Query: 467 GKCSCGDYW 475
GKCSC D+W
Sbjct: 597 GKCSCRDFW 605
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C K++E G+++H L +V + LI MY +C + AR VFD++
Sbjct: 134 FPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIV 193
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + ++ MI+GYA + + L LF +M+ P++ T L V ++CA ++ G
Sbjct: 194 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKW 253
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
E K +G ++ A+I + G L +A E M ++ T + W A+ H
Sbjct: 254 IHEYAKK-HGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDT-QAWSAMIVAYANH 311
Query: 311 GDVE 314
G E
Sbjct: 312 GQAE 315
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 152 ELLRTSAFV-----KDVELNNKLIEMYGKC---CNTRLARKVFDQLRKRNLSSWHLMISG 203
EL++ A+ +DV N KLI + + AR +FD + + ++ ++ + G
Sbjct: 46 ELMQIQAYAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARG 105
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
Y+ + + LF ++ + PD TF + ACA A+A++EG
Sbjct: 106 YSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEG 150
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 218/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L +C N+ ++E+G+++H L + + + N L+ MY KC + AR F ++
Sbjct: 183 FTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEIL 242
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ SW+ MI GYA +G G + L +FE M+ TG PD T + V AAC+ A V +G
Sbjct: 243 EKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSE 302
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M DYGI + HY ++ +LG AG L EA+ ++ MPFEP W AL ++IH
Sbjct: 303 YFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIH 362
Query: 311 GDVELEDRAEELLGDLDPSKAIV-----------------DKIPLPPR----KKQSATNM 349
G+ EL ++A +++ +++P + + K+ L R KK +
Sbjct: 363 GNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSW 422
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
LE +N++ ++ D +K ++ ++ ++++ GY+ T V HD++EE K L+
Sbjct: 423 LEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLK 482
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYG++ P P+R+IKNLR+C DCHNAIK +SKIVGR +I+RDN RFH+F
Sbjct: 483 YHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFE 542
Query: 466 DGKCSCGDYW 475
G CSC D+W
Sbjct: 543 GGSCSCRDFW 552
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
R R +FD + +R+ SW MI+GY+ NG + L F +M++ ++ +F +
Sbjct: 130 VRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALST 189
Query: 239 CASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C++ A++ G L+ ++K Y + + A++ + G + EA + + + E V
Sbjct: 190 CSNIAALELGRQLHCRLVKAGYQTGWYVGN--ALLAMYCKCGSIDEARDAFQEI-LEKDV 246
Query: 298 EVWEALRNFAQIHG 311
W + IHG
Sbjct: 247 VSWNTM-----IHG 255
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
LAR +FD++ +R+L SW++M++GY N LFE+M
Sbjct: 13 LARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM 52
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 218/373 (58%), Gaps = 29/373 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L +IE G+ +HE + + + KDV + LI+MY KC AR+VFD++
Sbjct: 179 FPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKIL 238
Query: 191 KRN---LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
R+ + SW+ MI+GYA +G + L LFE+M + PD TF+ V +AC+ ++E
Sbjct: 239 VRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVAK-PDHITFVGVLSACSHGGLLEE 297
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G+++FE M DY I P ++HY ++ +LG +G L EA + +M P VW AL N
Sbjct: 298 GWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSC 357
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKI---------------PLPPR--KKQSA 346
+IH +VEL + A E L +L+P A I+ I + R KK A
Sbjct: 358 KIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIA 417
Query: 347 TNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E KN+V + S D L Y +++ + G M+EAGY P T V HD++++ K
Sbjct: 418 CSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKAN 477
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ HSERLAIA+GLISTPP L I KNLRIC DCH AIK +SKI RE+ VRD R+H
Sbjct: 478 MVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYH 537
Query: 463 HFRDGKCSCGDYW 475
HF+DG CSCGDYW
Sbjct: 538 HFKDGVCSCGDYW 550
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y ++SLL SC K+I+ GK++H + + F D + KL+ +Y C + AR +FD
Sbjct: 75 YSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFD 134
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ K N+ W+++I GYA NG + L+ QM G PD TF V ACA+ A++
Sbjct: 135 RIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEH 194
Query: 248 GFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEV--WE 301
G EI +++ + G E + A+I + G + A E +++ V V W
Sbjct: 195 G---REI--HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249
Query: 302 ALRNFAQIHGD-VELEDRAEEL 322
A+ +HG E D EE+
Sbjct: 250 AMITGYAMHGHATEALDLFEEM 271
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++L+ + + ++E G+++H + V D + L++MY KC N A ++F ++
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN++ W+ M+ G A +G + + LF+ M+ G PD+ +F+ + +AC+ A E +
Sbjct: 556 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 615
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y M NDYGI P IEHY ++ LG AG + EA++ +E MPF+ + + AL +I
Sbjct: 616 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 675
Query: 311 GDVELEDRAEELLGDLDPSKA------------------IVDKIPLPPRK---KQSATNM 349
GDVE R L L+P + + D + RK K +
Sbjct: 676 GDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 735
Query: 350 LEEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ KN V D RS Y+K++ + +RE GYVPDT +VL D+++E KE++L
Sbjct: 736 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 795
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIAYGLISTP +R+IKNLR+CGDCHNAIK +SK+ RE+++RD RFHHFR
Sbjct: 796 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 855
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 856 DGVCSCGDYW 865
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+CG L ++ GK++H + F D+ +N+ +++MY KC + A VF+ + + +
Sbjct: 401 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 460
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W MISG NG L ++ +MR++ PD+ TF + A + A+++G L+ ++
Sbjct: 461 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 520
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
K D P + +++ + G++ +A ++M + +W A+ HG+ E
Sbjct: 521 KLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 576
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL + + ++ +GK H + S D L+N L+ MY KC + AR+VFD +R+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 194 LSSWHLMISGYAA-----NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L +W+ ++ YAA +G +GL LF +R + + T V C + G
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLC-----LNSG 197
Query: 249 FLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE-AL 303
L+ + Y I G+E + A++ + G + +A + M E V +W L
Sbjct: 198 CLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMML 256
Query: 304 RNFAQIHGDVELEDRAEELLGDLDPS 329
+ + Q+ LE A +L + S
Sbjct: 257 KGYVQL----GLEKEAFQLFSEFHRS 278
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L C N + + VH DV ++ L+ +Y KC R AR +FD +R
Sbjct: 186 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 245
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
+R++ W++M+ GY G + LF + ++G PD+ + ++ C A
Sbjct: 246 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWA 297
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 99 DVNLLSLCKEGKV-----REAIEYMGQDASASAGYDVFSS--LLDSC--GNLKSIEMGKR 149
DV L ++ +G V +EA + + + D FS +L+ C +E+GK+
Sbjct: 248 DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQ 307
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH + S DV + N L+ MY K AR+VF+ ++ +L SW+ MIS A +
Sbjct: 308 VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 367
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACAS----------------AEAVKEGF 249
+ + LF + G PD T + A A+ A A+K GF
Sbjct: 368 EEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 219/394 (55%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G EA++ G+ + D FS L + NL +E G+++H L+ F D+ +
Sbjct: 1331 GCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVT 1390
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++MYGKC K+ Q R+ SW+++IS +A +G F +M K GP
Sbjct: 1391 NAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 1450
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD TF+ + +AC V EG Y++ M ++G+ PGIEH + II +LG +G L AE
Sbjct: 1451 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEG 1510
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----------------- 329
F++ MP P W +L +IHG++EL + E L +LDPS
Sbjct: 1511 FIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 1570
Query: 330 ----KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----RE 381
+ + ++ KKQ A + ++ K++V + + Y + ++ G++ +E
Sbjct: 1571 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 1630
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGYVPDT + LHD+DEE KE L HSERLA+A+GLI+TP LRI KNLR+CGDCH+
Sbjct: 1631 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1690
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K +S IVGR++++RD RFHHF GKCSCGDYW
Sbjct: 1691 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L+ C NL S +G ++H DV + N LI+MY K A++ FD++
Sbjct: 336 ILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEM 395
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++N+ SW +ISGYA +G G + L+++M G P+ TFL + AC+ EG
Sbjct: 396 EEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGC 455
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M N Y I P EHY ++ + G L EA + ++ + +W A+ + I
Sbjct: 456 ECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSI 515
Query: 310 HGDVELEDRAEELLGDLDPSKAI 332
+G + L A L ++ P ++
Sbjct: 516 YGYMSLGKEAASNLFNMQPENSV 538
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
S C G++ EA++ + + + ++ +L C + K+ + G +H L T+ F D+
Sbjct: 7 SACNLGRLAEALKLLSSNPT-RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDL 65
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
LN KLI Y K + AR VFD + +R++ SW M+SGY+ NG+ +LF MR
Sbjct: 66 HLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHC 125
Query: 224 GPHPDKETFLVVFAACASAEAVKEG 248
G ++ T+ AC S + G
Sbjct: 126 GVKANQFTYGSALRACTSLRCLDMG 150
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H + + N LI MY K N AR VFD++R RN +SW M+SGY
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGF-LYFEIMKNDYGIVPG 264
G + + LF QM G P+ + AC+ S EGF ++ ++K GI+
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT--GILGD 880
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ A++ GS G + A++ E MP + V W +L
Sbjct: 881 VYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSL 918
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+++ G+ +H L+ +V + N L+ +Y + + A VF + +R+L SW+ M++
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
Y +G+ DGL + ++ + G + TF AAC++ E + E + ++ IV
Sbjct: 1123 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALI-----IV 1177
Query: 263 PGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ A++ + G G ++EA++ ++ MP +P W AL
Sbjct: 1178 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNAL 1221
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S L +C +L+ ++MG +V ++ FV+++ + + L++ + KC A +F +
Sbjct: 133 TYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM 192
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+R++ SW+ MI GYA G D +F M + G PD T V A A
Sbjct: 193 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 243
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 126 AGYDVFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
A Y S+L +C + + G +H + + F D + N LI MY KC + +
Sbjct: 1248 ANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNY 1307
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+FD L ++ +W+ M++ A +G G + L +F +MR G + D+ +F AA A+
Sbjct: 1308 IFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV 1367
Query: 245 VKEG 248
++EG
Sbjct: 1368 LEEG 1371
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 132 SSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SL+ +C + + G +VH + + + DV + L+ YG A+K+F+++
Sbjct: 849 ASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 908
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ SW ++ GY+ +G + L ++++MR+ G ++ TF V ++C E + L
Sbjct: 909 DHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE---DQVL 965
Query: 251 YFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++++ + YG + ++I + S + EA + M E + W A+ +
Sbjct: 966 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYA 1024
Query: 309 IHG 311
HG
Sbjct: 1025 HHG 1027
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L +C N + + K VH L+ + F + + N L+ MYGK A+KV +
Sbjct: 1151 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 1210
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+ + +W+ +I G+A N + + + ++ +R+ G + T + V AC++ +
Sbjct: 1211 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPD 1264
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G+V + M Q+ S + F+++ SCG L+ +G +V + F V + N
Sbjct: 929 GEVLNVYQRMRQEG-VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANS 987
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
LI M+ + A VFD + + ++ SW+ MIS YA +G + L F MR
Sbjct: 988 LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 208/372 (55%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS L +C L ++ +GK VH+++ +V + LI+MY KC + AR +FD +
Sbjct: 425 TISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW++MISGY +GQGA+ L L++ M HP TFL V AC+ VKEG
Sbjct: 485 DNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGT 544
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE-VWEALRNFAQ 308
F M +DYGI PGIEH ++ +LG AG L EA E + P +W AL
Sbjct: 545 TVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACM 604
Query: 309 IHGDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPRK--KQSAT 347
+H D +L A + L +L+P S+A V + RK K
Sbjct: 605 VHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGC 664
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
++E +R + + D + Y ++ L +M EAGY PDT L+D++EE KE
Sbjct: 665 TLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHM 724
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
++ HSE+LAIA+GL++T P +RIIKNLR+C DCHNA KI+SK+ R ++VRD RFHH
Sbjct: 725 VKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHH 784
Query: 464 FRDGKCSCGDYW 475
FRDG CSCGDYW
Sbjct: 785 FRDGVCSCGDYW 796
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Query: 101 NLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV 160
LL+ + EA M S +S+L + + + MG+ VH
Sbjct: 194 TLLAGLSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLA 253
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+ + LI +Y KC + AR +FD++ +L +++ +ISGY+ NG + LF+++
Sbjct: 254 QHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKEL 313
Query: 221 RKTGPHPDKETFLVV-----------FAACASAEAVKEGF 249
G P T + + A C A VK G
Sbjct: 314 VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGL 353
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+ ++ L +Y + + AR+ FD + ++ + SW+ MISGYA NG + LF+QM+
Sbjct: 356 NAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQ 415
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P+ T +ACA A+ G +I+ N+ + + A+I + G +
Sbjct: 416 ALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANE-KLELNVYVMTALIDMYVKCGSI 474
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
EA + M + V W + + +HG
Sbjct: 475 AEARCIFDSMDNKNVVS-WNVMISGYGLHG 503
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 221/368 (60%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++E+GK + + +K VEL+N L++M+ KC + A +F + KR
Sbjct: 216 SVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKR 275
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW +I G A +G+G + + LFE+M+ +G P+ F+ + +AC+ + V+ G YF
Sbjct: 276 TIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYF 335
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M +GIVP IEHY ++ +L AG + EA EFVERMP EP +W L + ++HG+
Sbjct: 336 SEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGE 395
Query: 313 VEL-EDRAEELLGD------------------LDPSKAIVDKIPLPPR--KKQSATNMLE 351
++L E +++L+ + LD K ++ + + +K + M+E
Sbjct: 396 LKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIE 455
Query: 352 EKNRVSDYRSTDLYRGEY-EKMKGLNG---QMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + ++ D +Y E +K +N +M+ AGY P T V DIDEE KE AL H
Sbjct: 456 LDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRH 515
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+ L++TPP P+RI KNLR+CGDCH+A K +SKI RE+++RD RFHHFRDG
Sbjct: 516 SEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHFRDG 575
Query: 468 KCSCGDYW 475
+CSCGD+W
Sbjct: 576 QCSCGDFW 583
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN--TRLARKVFDQ 188
F +L +C L+ + +GK VH L F D+ + N ++ MY CC+ ARK+FD+
Sbjct: 112 FPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYC-CCSGGMEFARKLFDE 170
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ K + +W MI GYA GQ A + LF +M+ G PD T + V +AC A++ G
Sbjct: 171 MPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELG 230
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ E ++ +E A++ + G + +A M + T+ W ++
Sbjct: 231 -KWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMS-KRTIVSWTSVIVGLA 288
Query: 309 IHG 311
+HG
Sbjct: 289 MHG 291
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++L+ + + ++E G+++H + V D + L++MY KC N A ++F ++
Sbjct: 134 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 193
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN++ W+ M+ G A +G + + LF+ M+ G PD+ +F+ + +AC+ A E +
Sbjct: 194 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 253
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y M NDYGI P IEHY ++ LG AG + EA++ +E MPF+ + + AL +I
Sbjct: 254 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 313
Query: 311 GDVELEDRAEELLGDLDPSKA------------------IVDKIPLPPRK---KQSATNM 349
GDVE R L L+P + + D + RK K +
Sbjct: 314 GDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 373
Query: 350 LEEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ KN V D RS Y+K++ + +RE GYVPDT +VL D+++E KE++L
Sbjct: 374 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 433
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIAYGLISTP +R+IKNLR+CGDCHNAIK +SK+ RE+++RD RFHHFR
Sbjct: 434 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 493
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 494 DGVCSCGDYW 503
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+CG L ++ GK++H + F D+ +N+ +++MY KC + A VF+ + + +
Sbjct: 39 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 98
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W MISG NG L ++ +MR++ PD+ TF + A + A+++G L+ ++
Sbjct: 99 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 158
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
K D P + +++ + G++ +A ++M + +W A+ HG+ E
Sbjct: 159 KLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 214
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 214/366 (58%), Gaps = 26/366 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L SC + ++E+GK++H L + F N L+ MYGKC + A VF+ + ++++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW+ MI+GYA +G G + L LFE M+ T PD T + V +AC+ V +G YF
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNS 530
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M +YGI +HY +I +LG AG L EA ++ MPF P W AL ++IHGD E
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE 590
Query: 315 LEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNMLEEK 353
L ++A E + +++P + + K+ KK + +E +
Sbjct: 591 LGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQ 650
Query: 354 NRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
N+ + D E E+ ++ L+ ++++ G+V T+ VLHD++EE KE L+YHSE
Sbjct: 651 NKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSE 710
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
+LA+A+G++S PP P+R+IKNLR+C DCHNAIK +SKI R++IVRD+ RFHHF +G C
Sbjct: 711 KLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSC 770
Query: 470 SCGDYW 475
SCGDYW
Sbjct: 771 SCGDYW 776
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y +C N A+ +FD++ +R+ SW MISGYA +GQ + L LF +M++ G
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIE 283
++ ++CA A++ G L+ ++K + G + G A++ + G G + E
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG----NALLAMYGKCGSIEE 458
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + E + E + W + HG
Sbjct: 459 AFDVFEDIT-EKDIVSWNTMIAGYARHG 485
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + AR++FDQ+ RN SSW+ M++GYA G +LF++M P
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM----PQ 367
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
D ++ + + A + +E F MK D GI+
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FD++ R+ SW++MI+GYA NG ++ LFE++ P D + + +
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDVFAWTAMVSGFVQ 289
Query: 242 AEAVKEGFLYFEIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ E FE M KN+ I Y+ + + +A E ++MP T
Sbjct: 290 NGMLDEATRIFEEMPEKNEVSWNAMIAGYV-------QSQQIEKARELFDQMPSRNTSSW 342
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
+ +AQ G++D +K + D++P
Sbjct: 343 NTMVTGYAQC--------------GNIDQAKILFDEMP 366
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
C + S+ G R + +A + NNK C ARKVF+++ R+L SW
Sbjct: 76 CESALSVFNGMRRRSTVTYNAMISGYLSNNKF-----DC-----ARKVFEKMPDRDLISW 125
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
++M+SGY NG + LF QM P D ++ + + A V+E F+ M
Sbjct: 126 NVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 217/384 (56%), Gaps = 28/384 (7%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
MG G+ + S LL +C L ++ +G+R H + ++ N L+++Y KC
Sbjct: 232 MGLRGVEPDGFTMVS-LLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCG 290
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ R A KVFD++ ++++ SW +I G A NG G + L LF+++ + G P + TF+ V
Sbjct: 291 SIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLY 350
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC+ V EGF YF+ MK +YGIVP IEHY ++ +LG AG + +A EF++ MP +P
Sbjct: 351 ACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNA 410
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR---------------- 341
VW L IHG + L + A L L+P K D + L
Sbjct: 411 VVWRTLLGACTIHGHLALGEVARAQLLQLEP-KHSGDYVLLSNLYASEQRWSDVHKVRRT 469
Query: 342 ------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYV 391
KK +++E +NR+ ++ RS Y K+ + ++ GYVP V
Sbjct: 470 MLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNV 529
Query: 392 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGR 451
L DI+EE KE AL YHSE++AIA+ LI+T +P+R++KNLR+C DCH AIK++SK+ R
Sbjct: 530 LADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDR 589
Query: 452 ELIVRDNKRFHHFRDGKCSCGDYW 475
E++VRD RFHHF+DG CSC DYW
Sbjct: 590 EIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ LL + L + G++VH + + F V + N L+ MY C + A K+F+ +
Sbjct: 143 YPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMA 202
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RNL +W+ +I+GYA NG+ + L LF +M G PD T + + +ACA A+ G
Sbjct: 203 ERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 260
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLI-EMYGKCCNTRLARKVFDQLR 190
+LL SC + K +++H +R + + ++ LI + C A ++F Q++
Sbjct: 44 ALLLSCASSKF--KFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQ 101
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ +W+ MI GYA + L L+ QM + PD T+ + A A V+EG
Sbjct: 102 NPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEK 161
Query: 251 YFEI-MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
I ++N + + +++ ++ + + GH A + E M E + W ++ N +
Sbjct: 162 VHSIAIRNGFESLVFVQN--TLVHMYAACGHAESAHKLFELMA-ERNLVTWNSVINGYAL 218
Query: 310 HG 311
+G
Sbjct: 219 NG 220
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 221/370 (59%), Gaps = 28/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L SC L ++++GK +HE ++ + F + V+++ LI+MY KC + A VF+ + R
Sbjct: 227 SVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR 286
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W MI YA +G G + LF++MRK G PD+ TFL + AC+ V+EGF YF
Sbjct: 287 DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYF 346
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M++ YG++PGI+HY ++ +LG AG L EA EF+ +P PT +W L + HG+
Sbjct: 347 YGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGN 406
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPLP--------------PRK--------KQSATNML 350
VEL R E + +LD S D I L RK K + +
Sbjct: 407 VELGKRVIEQIFELDDSHG-GDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSV 465
Query: 351 EEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLH-DIDEEAKEKALQ 405
E N V ++ S D + ++ + L +++ GYVP+T V H D+++E KE L+
Sbjct: 466 EVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLR 525
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAI +GL++TPP +R++KNLR+CGDCH+A K++S I R++I+RD +RFHHF+
Sbjct: 526 YHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFK 585
Query: 466 DGKCSCGDYW 475
DGKCSC DYW
Sbjct: 586 DGKCSCEDYW 595
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C + K++E G+++H L ++V + LI MY C AR+VFD++
Sbjct: 124 FPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIW 183
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +++ MI+GYA + + L LF +++ P T L V ++CA A+ G
Sbjct: 184 EPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKW 243
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
E +K + G ++ A+I + G L +A E M T + W A+ IH
Sbjct: 244 MHEYVKKN-GFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDT-QAWSAMIMAYAIH 301
Query: 311 G 311
G
Sbjct: 302 G 302
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 133 SLLDSCGNLKSIE----MGKRVH---ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
SLL C +L+ ++ + H +L + F+ LN M + A +
Sbjct: 25 SLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSM-------QHAHHL 77
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FDQ+ + ++ ++ M GYA LF Q+ +G PD TF + ACAS +A+
Sbjct: 78 FDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKAL 137
Query: 246 KEG 248
+EG
Sbjct: 138 EEG 140
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 214/366 (58%), Gaps = 26/366 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L SC + ++E+GK++H L + F N L+ MYGKC + A VF+ + ++++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW+ MI+GYA +G G + L LFE M+ T PD T + V +AC+ V +G YF
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNS 530
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M +YGI +HY +I +LG AG L EA ++ MPF P W AL ++IHGD E
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE 590
Query: 315 LEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNMLEEK 353
L ++A E + +++P + + K+ KK + +E +
Sbjct: 591 LGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQ 650
Query: 354 NRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
N+ + D E E+ ++ L+ ++++ G+V T+ VLHD++EE KE L+YHSE
Sbjct: 651 NKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSE 710
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
+LA+A+G++S PP P+R+IKNLR+C DCHNAIK +SKI R++IVRD+ RFHHF +G C
Sbjct: 711 KLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSC 770
Query: 470 SCGDYW 475
SCGDYW
Sbjct: 771 SCGDYW 776
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y +C N A+ +FD++ +R+ SW MISGYA +GQ + L LF +M++ G
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIE 283
++ ++CA A++ G L+ ++K + G + G A++ + G G + E
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG----NALLAMYGKCGSIEE 458
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A + E + E + W +
Sbjct: 459 AFDVFEDIT-EKDIVSWNTM 477
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + AR++FDQ+ RN SSW+ M++GYA G +LF++M P
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM----PQ 367
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
D ++ + + A + +E F MK D GI+
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FD++ R+ SW++MI+GYA NG ++ LFE++ P D + + +
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDVFAWTAMVSGFVQ 289
Query: 242 AEAVKEGFLYFEIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ E FE M KN+ I Y+ + + +A E ++MP T
Sbjct: 290 NGMLDEATRIFEEMPEKNEVSWNAMIAGYV-------QSQQIEKARELFDQMPSRNTSSW 342
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
+ +AQ G++D +K + D++P
Sbjct: 343 NTMVTGYAQC--------------GNIDQAKILFDEMP 366
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
C + S+ G R + +A + NNK C ARKVF+++ R+L SW
Sbjct: 76 CESALSVFNGMRRRSTVTYNAMISGYLSNNKF-----DC-----ARKVFEKMPDRDLISW 125
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
++M+SGY NG + LF QM P D ++ + + A V+E F+ M
Sbjct: 126 NVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 212/381 (55%), Gaps = 25/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
QDA + SSLL++C NL + E GK++H F+ D+ +N L+ MY KC +
Sbjct: 478 QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSI 537
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A + F ++ R + SW MI GYA +G G + L LF QM + G P+ T + V AC
Sbjct: 538 EDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCAC 597
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
A V EG YFE M+ +GI P EHY +I +LG +G L EA E V +PFE V
Sbjct: 598 NHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFV 657
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLP 339
W AL A+IH ++EL +A ++L DL+P K A V K
Sbjct: 658 WGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKD 717
Query: 340 PR-KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHD 394
+ KK+ + +E K++V + RS Y K+ L + +AGY +H+
Sbjct: 718 SKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHN 777
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+D+ KEK L +HSE+LA+A+GLI+TPP P+R+ KNLRIC DCH K + KIV RE+I
Sbjct: 778 VDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREII 837
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFHHF+DG CSCGDYW
Sbjct: 838 VRDINRFHHFKDGSCSCGDYW 858
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +C + + MG++VH + + F D + N L+ MY KC +R++F +
Sbjct: 85 FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIV 144
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+ SW+ + S Y + + + LF++M ++G P++ + ++ ACA ++EG L
Sbjct: 145 ERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA---GLQEGDL 201
Query: 251 YFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+I + ++ + A++ + AG IE V + P V W A+
Sbjct: 202 GRKIHGLMLKMGLDLDQFSANALVDMYSKAGE-IEGAVAVFQDIAHPDVVSWNAIIAGCV 260
Query: 309 IHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNR 355
+H + D A LL ++ S + L K A +E R
Sbjct: 261 LH---DCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR 304
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L S +L++I++ K++H + S D + N L++ YGKC + A K+F++
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT 447
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+L ++ MI+ Y+ G G + L L+ QM+ PD + ACA+ A ++G
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQ 507
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ +K +G + I +++ + G + +A+ +P V W A+
Sbjct: 508 LHVHAIK--FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS-WSAMIGGYAQ 564
Query: 310 HG 311
HG
Sbjct: 565 HG 566
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS L +C + E+G+++H L D+ L++MY KC AR+ +D +
Sbjct: 287 LSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP 346
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+++ +W+ +ISGY+ G D + LF +M ++ T V + AS +A+K
Sbjct: 347 KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQ 406
Query: 251 YFEIMKNDYGIVPGI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
I I GI + Y+ +++ G H+ EA + E +E V + +
Sbjct: 407 IHTI-----SIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAY 461
Query: 307 AQIHGDVE 314
+Q +GD E
Sbjct: 462 SQ-YGDGE 468
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H L F +D L N L+ +Y KC ARK+ D+ + ++ SW ++SGY NG
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ L++F +M G ++ TF V AC+
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACS 93
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 229/399 (57%), Gaps = 28/399 (7%)
Query: 105 LCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L K+ V EAIE + Q + +++L C + ++ GK +H ++ S D
Sbjct: 254 LVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPD 313
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N L++MY KC R+VF+ ++ ++L+SW+ +I+GYA NG+ + + F++M
Sbjct: 314 APVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMIC 373
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
+G PD TF+ + + C+ A +G FE+MK DYGI P +EHY ++ VLG AG +
Sbjct: 374 SGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIK 433
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS------------- 329
EA E V+ MPF+PT +W +L N ++HG+V L + + L +L+P+
Sbjct: 434 EALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYA 493
Query: 330 --------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS--TDLYRG--EYEKM-KGLN 376
K + + + K++ + L+ K+++ + + ++ +R EY+K+ K L
Sbjct: 494 NAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLM 553
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
M E GYVPDT VLHD+ EE + + HSERLA + LI+T MP+RI KNLR+C
Sbjct: 554 EAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCV 613
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH+ +K +SK+ GR +++RD RFHHF+DG CSC DYW
Sbjct: 614 DCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
G FS L +C +L ++ G+ VH + + D +NN L+ +Y + A +VF
Sbjct: 177 GNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVF 236
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + RN+ SW+ +I+G + + F M+ G T + CA A+
Sbjct: 237 DGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALG 296
Query: 247 EG 248
G
Sbjct: 297 SG 298
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 101 NLLSLCKEGKVREA---IEYMGQDASASA-GYDVFSSLLDSCGNLKSIEMGKRVHELLRT 156
L SL K GK+ EA IEY + A+A + + L SC + K++E G+R++ L
Sbjct: 37 TLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLLL 96
Query: 157 SA------FVKDVELNNKLIEMYGKCCNTRLARKVF-DQLRKRNL--SSWHLMISGYAAN 207
+ + L KLI ++ C AR+VF D +L S W M GY+ N
Sbjct: 97 YRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRN 156
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
G + L+L+ +M F + AC+ ++ G
Sbjct: 157 GYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTG 197
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 215/372 (57%), Gaps = 28/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-CNTRLARKVFDQ 188
+ + LL CG L S ++G+++H + ++ + N L+ MY KC C + KVFD
Sbjct: 552 ILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD--SHKVFDS 609
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +R++ +W+ I+G A +G G + + ++E M G P++ TF+ + AC+ A V EG
Sbjct: 610 MEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEG 669
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ +F+ M DYG+ P +EHY ++ +LG G + AE+F+ MP EP +W AL +
Sbjct: 670 WQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACK 729
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------IVDKIPLPPRKKQSAT------ 347
IH + E+ RA E L +PS A V+ L KQ
Sbjct: 730 IHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGC 789
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ ++ +N+V + + D + E+ ++ L +R GYVPDT +VLHDIDEE KE +
Sbjct: 790 SWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESS 849
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LA+AYGL+ TP MP++I+KNLRICGDCH IK +S + R++ +RD RFHH
Sbjct: 850 LLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHH 909
Query: 464 FRDGKCSCGDYW 475
FR+G CSCGD+W
Sbjct: 910 FRNGSCSCGDFW 921
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C ++ ++E G++VH L + + + N LI MYGKC N R+VF+++R ++ S
Sbjct: 427 ACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS 486
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+ I+ N D +F+ M D ++ + +A A AE E +F+ M
Sbjct: 487 WNSFIAALVQNNMLEDARHIFDNMLSR----DVVSWTTIISAYAQAERGDEAVEFFKTML 542
Query: 257 NDY 259
+++
Sbjct: 543 HEH 545
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 98/240 (40%), Gaps = 17/240 (7%)
Query: 77 TGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDA-------SASAGYD 129
TG HS+ D Q+ ++ ++ G VR G D AS
Sbjct: 165 TGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQS 224
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQ 188
F+S+L + L+ + + + + L+ + F DV + ++ +Y + + +A K FD
Sbjct: 225 NFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDG 284
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN +W MI+ + G+ D + P + L A C + E
Sbjct: 285 MVERNEYTWSTMIAALSHGGR-IDAAIAVYGRDPVKSIPSQTALLTGLARCGR---ITEA 340
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ FE + + P + + A+I G + EA+E +RMPF T+ + +AQ
Sbjct: 341 RILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQ 395
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y + + +AR++FD + R+++SW+ M++GY + Q D LF+QM P
Sbjct: 130 NAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQM----PQ 185
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV---LGSAGHLIE 283
+ T+ V+ + E +G+ F +M ++ G P ++ +++ L G L
Sbjct: 186 RNLVTWTVMISGYVRIEQHGKGWDIFRMMHHE-GASPDQSNFASVLSAVTGLQDLGVLEV 244
Query: 284 AEEFVERMPFEPTVEVWEALRN 305
V + FE V + ++ N
Sbjct: 245 LRPLVLKTGFESDVVIGTSILN 266
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL---ARKVFDQLRKRNLSSWHLM 200
I M +R+ + + + +DV N ++ Y C++R A +F Q+ +RNL +W +M
Sbjct: 142 ITMARRLFDAMPS----RDVTSWNSMVTGY---CHSRQMVDAWNLFKQMPQRNLVTWTVM 194
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
ISGY Q G +F M G PD+ F V +A
Sbjct: 195 ISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSA 232
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + A+++FD++ RN SW MI+GYA NG+ + L L + + + G
Sbjct: 356 NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGML 415
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P + F AC+ A++ G
Sbjct: 416 PSLSSLTSSFLACSHIGALETG 437
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
L + G++REA E DA ++S++ + N +E + + + + +V
Sbjct: 43 LARLGRLREAREVF--DAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGG----NVR 96
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
L+ Y + AR+VFD + +RN +W+ M+S Y NG LF+ M
Sbjct: 97 TATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAM 152
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 212/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CG L ++E G+ VH + + +V + L++MY KC + AR VFD++ +
Sbjct: 195 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 254
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ MI GYA +G + L LF+ M + G HP TF+ + +AC + V EG+ F
Sbjct: 255 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 314
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK++YGI P IEHY ++ +LG AGH+ +A E V+ M EP +W L ++HG
Sbjct: 315 NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 374
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+ L ++ ELL G+ D + + KK+ + +E
Sbjct: 375 IALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIE 434
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V ++ + L + Y ++ +NG ++ GY P T VLHDI E KE++L+ H
Sbjct: 435 VNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVH 494
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+T P ++I+KNLR+C DCH K++SKI GR+++VRD RFHHF +G
Sbjct: 495 SEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNG 554
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 555 SCSCGDYW 562
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
++ Y K AR +FD + +R+ W++MI GY NG + L+LF +M K P+
Sbjct: 130 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 189
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
+ T L V +AC A++ G ++N+ GI + A++ + G L +A
Sbjct: 190 EVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCGSLEDARLVF 248
Query: 289 ERMPFEPTVEVWEALRNFAQIHG 311
+++ + V W ++ +HG
Sbjct: 249 DKID-DKDVVAWNSMIVGYAMHG 270
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 212/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CG L ++E G+ VH + + +V + L++MY KC + AR VFD++ +
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ MI GYA +G + L LF+ M + G HP TF+ + +AC + V EG+ F
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 380
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK++YGI P IEHY ++ +LG AGH+ +A E V+ M EP +W L ++HG
Sbjct: 381 NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 440
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+ L ++ ELL G+ D + + KK+ + +E
Sbjct: 441 IALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIE 500
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V ++ + L + Y ++ +NG ++ GY P T VLHDI E KE++L+ H
Sbjct: 501 VNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVH 560
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+T P ++I+KNLR+C DCH K++SKI GR+++VRD RFHHF +G
Sbjct: 561 SEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNG 620
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 621 SCSCGDYW 628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L C IE GK +H F D+ + L+++Y + + A+++FD +
Sbjct: 131 FSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 186
Query: 191 KRNLSS-------------------------------WHLMISGYAANGQGADGLMLFEQ 219
+++L S W++MI GY NG + L+LF +
Sbjct: 187 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 246
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M K P++ T L V +AC A++ G ++N+ GI + A++ + G
Sbjct: 247 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCG 305
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L +A +++ + V W ++ +HG
Sbjct: 306 SLEDARLVFDKID-DKDVVAWNSMIVGYAMHG 336
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 219/369 (59%), Gaps = 26/369 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +CG+L ++ +G+R+HE + ++ L N LI+MY +C A++VFD+++
Sbjct: 306 ASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKF 365
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+++SW +IS Y GQG + + LF +M+ +G PD F+ + +AC+ + + EG Y
Sbjct: 366 RDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFY 425
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M +DY I P IEH+ ++ +LG +G + EA +++MP +P VW AL + +++
Sbjct: 426 FKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYS 485
Query: 312 DVELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNML 350
++++ A + L L P + AI + +K + +
Sbjct: 486 NMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNV 545
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E N+V + + D Y + YE++ L G+M+E GYVP T LHD++EE KE L
Sbjct: 546 ELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAV 605
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI + +++T P+RI KNLR+CGDCH A K++SKIV RE+++RD RFHHF+D
Sbjct: 606 HSEKLAIVFAILNTQES-PIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKD 664
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 665 GICSCGDYW 673
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
++ +LD ++K++ K VH + +F ++ L KL+ Y LAR VFD
Sbjct: 36 ELLGKVLDQYPDIKTL---KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDV 92
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN+ +++MI Y N D L++F M G PD T+ V AC+ ++ ++ G
Sbjct: 93 IPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIG 152
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ + K G+ + +I + G G L EA ++ M + V + +A
Sbjct: 153 LQLHGAVFK--VGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYA 210
Query: 308 QIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML 350
Q + D E+ G A LP S+ N+L
Sbjct: 211 QNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVL 253
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C ++ +G ++H + ++ + N LI +YGKC AR V D+++
Sbjct: 136 YPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQ 195
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ M++GYA N Q D L + +M PD T + A + + E L
Sbjct: 196 SKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS--ENVL 253
Query: 251 YFEIM 255
Y E M
Sbjct: 254 YVEEM 258
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N ++F L K++L SW++MIS Y N + L+ QM K PD T V
Sbjct: 251 NVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLR 310
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC A+ G E ++ + P + ++I + G L +A+ +RM F V
Sbjct: 311 ACGDLSALLLGRRIHEYVERK-KLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-DV 368
Query: 298 EVWEAL 303
W +L
Sbjct: 369 ASWTSL 374
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 226/388 (58%), Gaps = 25/388 (6%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
E M +D + S++L +C + S +GK +H+ + +V + +I+M
Sbjct: 194 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDM 253
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
Y KC +ARK FD++R++N+ SW M++GY +G + L +F +M G P+ TF
Sbjct: 254 YCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITF 313
Query: 233 LVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+ V AAC+ A ++EG+ +F+ M +++ + PG+EHY ++ +LG AG+L EA + ++ M
Sbjct: 314 VSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 373
Query: 293 FEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----------------IVDK 335
P VW AL ++H +V+L + + L +LDP V++
Sbjct: 374 LRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVER 433
Query: 336 IPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPD 387
+ + + K ++++ K RV + D ++EK ++ L+ +++E GYVPD
Sbjct: 434 MRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPD 493
Query: 388 TRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSK 447
VLHD+ E KE L+ HSE+LA+A+G+++T P + IIKNLR+CGDCH AIK +SK
Sbjct: 494 MTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISK 553
Query: 448 IVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IV RE++VRD+KRFHHFRDG CSCGDYW
Sbjct: 554 IVDREIVVRDSKRFHHFRDGLCSCGDYW 581
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + SC L + G++ H+ F D+ +++ L++MY KC R AR +FD++
Sbjct: 79 FPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS 138
Query: 191 KRNLSSWHLMISG-------------------------------YAANGQGADGLMLFEQ 219
RN+ SW MI+G YA NG + + +F +
Sbjct: 139 HRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 198
Query: 220 MRKTGP-HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
M K G + + T V ACA + + + G ++ +++K G+ + +II +
Sbjct: 199 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK--MGLESNVFVGTSIIDMYCK 256
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + A + +RM E V+ W A+ +HG
Sbjct: 257 CGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHG 289
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 219/371 (59%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L +C ++ ++E+GK++H + + N L+ MY KC + A F+ +
Sbjct: 396 TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI 455
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ SW+ M++GYA +G G L +FE M+ G PD+ T + V +AC+ + G
Sbjct: 456 EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGT 515
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M DYG++P +HY +I +LG AG L EA++ + MPF+P W AL ++I
Sbjct: 516 EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRI 575
Query: 310 HGDVELEDRAEELLGDLDPSKAIV-----------------DKIPLPPR----KKQSATN 348
HG+ EL ++A E++ ++P + + DK+ R +K +
Sbjct: 576 HGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N++ + D E E+ ++ L+ +MRE GYV T+ VLHD++EE KE L
Sbjct: 636 WVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHML 695
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+A+G+++ P P+R++KNLR+C DCH+AIK +SKIVGR +I+RD+ RFHHF
Sbjct: 696 KYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHF 755
Query: 465 RDGKCSCGDYW 475
+G CSCGDYW
Sbjct: 756 NEGFCSCGDYW 766
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+++ N +I YG+ + ARK FD + +R+ SW +I+GYA +G + L +F ++
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++ G ++ TF + CA A++ G ++ + +K YG + + A++ + G
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAMYFKCG 443
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ EA + E + E V W + HG
Sbjct: 444 SIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 24/174 (13%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+D N +I Y + AR++FD+ R++ +W M+SGY NG + F++
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDE 291
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M P ++ ++ + A + + FE M I + +I G G
Sbjct: 292 M----PEKNEVSYNAMIAGYVQTKKMDIARELFESMP-----CRNISSWNTMITGYGQIG 342
Query: 280 HLIEAEEFVERMPFEPTVEVW--------------EALRNFAQIHGDVELEDRA 319
+ +A +F + MP V W EAL F +I D E +RA
Sbjct: 343 DIAQARKFFDMMPQRDCVS-WAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRA 395
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + LAR +FDQ+ +R+L SW++M++GY N + D LF+ M P
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM----PE 139
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIM 255
D ++ + + A V E F+ M
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N ++ Y + C AR++FD + ++++ SW+ ++SGYA NG + +F+ M
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + AA ++E L FE K+D+ ++ + ++
Sbjct: 169 ----PEKNSISWNGLLAAYVHNGRIEEACLLFE-SKSDWDLIS----WNCLMGGFVRKKK 219
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L +A ++MP + + +AQ G
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGG 250
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 129 DVFSSLLDSCGNLKSIEMG--KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D+FS + G +++ +G +R+ +L+ KDV N L+ Y + AR+VF
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYAQNGYVDEAREVF 165
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D + ++N SW+ +++ Y NG+ + +LFE
Sbjct: 166 DNMPEKNSISWNGLLAAYVHNGRIEEACLLFE 197
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 226/388 (58%), Gaps = 25/388 (6%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
E M +D + S++L +C + S +GK +H+ + +V + +I+M
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDM 407
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
Y KC +ARK FD++R++N+ SW M++GY +G + L +F +M G P+ TF
Sbjct: 408 YCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITF 467
Query: 233 LVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+ V AAC+ A ++EG+ +F+ M +++ + PG+EHY ++ +LG AG+L EA + ++ M
Sbjct: 468 VSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 527
Query: 293 FEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----------------IVDK 335
P VW AL ++H +V+L + + L +LDP V++
Sbjct: 528 LRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVER 587
Query: 336 IPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPD 387
+ + + K ++++ K RV + D ++EK ++ L+ +++E GYVPD
Sbjct: 588 MRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPD 647
Query: 388 TRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSK 447
VLHD+ E KE L+ HSE+LA+A+G+++T P + IIKNLR+CGDCH AIK +SK
Sbjct: 648 MTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISK 707
Query: 448 IVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IV RE++VRD+KRFHHFRDG CSCGDYW
Sbjct: 708 IVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C + + + VH L F D+ + N L++ Y KC ++R+VFD + +R
Sbjct: 266 SVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER 325
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG-FL 250
++ SW+ +I+ YA NG + + +F +M K G + + T V ACA + + + G +
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ +++K G+ + +II + G + A + +RM E V+ W A+ +H
Sbjct: 386 HDQVIK--MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMH 442
Query: 311 G 311
G
Sbjct: 443 G 443
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + SC L + G++ H+ F D+ +++ L++MY KC R AR +FD++
Sbjct: 155 FPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS 214
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQ--MRKTGPHPDKET------FLVVFAACA-- 240
RN+ SW MI+GY N L+LF++ + ++G D E + V +AC+
Sbjct: 215 HRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRV 274
Query: 241 SAEAVKE---GFLYFEIMKNDYGI 261
S +++ E GFL + D G+
Sbjct: 275 SEKSITEGVHGFLIKRGFEGDLGV 298
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 210/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C + SI ++H + S F D + N LI+ Y KC R A KVF L
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 527
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ SW+ +ISGYA +GQ AD L LF++M K+ + TF+ + + C+S V G
Sbjct: 528 ERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLS 587
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ M+ D+GI P +EHY I+++LG AG L +A +F+ +P P+ VW AL + IH
Sbjct: 588 LFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH 647
Query: 311 GDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
+V L + E LL ++ + +D++ L + +K +
Sbjct: 648 KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSW 707
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K + + + R ++ LN + GY+PD VLHD+D+E K + L
Sbjct: 708 VEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLW 767
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AYGL+ TPP P+RI+KNLR C DCH A ++SKIV RE+IVRD RFHHF
Sbjct: 768 VHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFE 827
Query: 466 DGKCSCGDYW 475
DGKCSCGDYW
Sbjct: 828 DGKCSCGDYW 837
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C N+ ++ GK++H D+ + N L++ Y KC + + K+F LR
Sbjct: 367 LSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE-GF 249
N SW+ ++ G++ +G G + L +F +M+ + T+ V ACAS +++ G
Sbjct: 427 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQ 486
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ I K+ + I + ++I G++ +A + + + E + W A+ + +
Sbjct: 487 IHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYAL 543
Query: 310 HGD----VELEDR 318
HG +EL DR
Sbjct: 544 HGQAADALELFDR 556
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L + L S+ +GK +H + + + L++MY KC + + AR F+ +
Sbjct: 266 LTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIP 325
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
++ MIS YA + Q LF ++ ++ P++ + V AC +
Sbjct: 326 YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + LI+ Y C A VF+ + +++ W M+S Y+ N + +F +MR +G
Sbjct: 199 VGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSG 258
Query: 225 --PHPDKETFLVVFAACASAEAVKEGF--LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P+P T ++ A C + + +G + + + V G A++ + G
Sbjct: 259 CKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGG-----ALLDMYAKCGD 313
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPP 340
+ +A E +P++ + + + +AQ + + ++A EL L S + ++ L
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQN----EQAFELFLRLMRSSVLPNEYSLSS 369
Query: 341 RKKQSATNMLE 351
Q+ TNM++
Sbjct: 370 -VLQACTNMVQ 379
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ N L+ MYGK AR++FD++ +RN+ S+ ++ +A G LF ++R
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 222 KTG 224
G
Sbjct: 155 WEG 157
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 225/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L +C + ++++GK +H+ + ++ + +++MY KC +ARK FD+L+
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW +M++GY +G G + + +F +M + G P+ TF+ V AAC+ A +KEG+
Sbjct: 363 RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH 422
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F MK ++ + PGIEHY ++ +LG AG+L EA ++ M +P VW +L +IH
Sbjct: 423 WFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPRK----KQSATNM 349
+VEL + + L LDPS V+++ + + K ++
Sbjct: 483 KNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSI 542
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K RV + D + YE + LN +++E GY+P+ VL+D+D E K L+
Sbjct: 543 VEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLR 602
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+G++++ P ++IIKNLRICGDCH AIK++SKIV RE+++RD+KRFHHF+
Sbjct: 603 VHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFK 662
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 663 DGLCSCGDYW 672
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + SC +L + GK++H+ + D+ + + LI+MY KC ARK+FD++
Sbjct: 89 FPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP 148
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+RN+ SW MISGY N + + + LF++
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEF 178
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ ++ +C + + + VH L F + + N L++ Y KC ++RKVFD +
Sbjct: 200 LLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGM 259
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG 248
+ ++ SW+ +I+ YA NG + LF M K G + T V ACA + A++ G
Sbjct: 260 EETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIG 319
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 183 RKVFDQ-LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R +F + + K ++ SW+ +I+ +A +G L F MRK HP++ TF +C+S
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ G +I + + G + ++ A+I + G+L +A + + +P E V
Sbjct: 99 LYDLCAG---KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP-ERNVVS 154
Query: 300 WEAL 303
W ++
Sbjct: 155 WTSM 158
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 216/371 (58%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L +C ++ ++E+GK+VH + + + K + N L+ MY KC A VF +
Sbjct: 380 TFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGV 439
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +++ SW+ M++GYA +G G L +FE M G PD+ T + V +AC+ G
Sbjct: 440 QHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGT 499
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M DYGI P +HY +I +LG AG L EA+ + MPFEP W AL ++I
Sbjct: 500 EYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRI 559
Query: 310 HGDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATN 348
HG++EL ++A E++ ++P + V K+ L R +K +
Sbjct: 560 HGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYS 619
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N++ + D + E Y ++ L+ +M+ GYV T+ VLHD++EE K+ L
Sbjct: 620 WVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHML 679
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+A+G+++ P P+R++KNLR+C DCHNAIK +SKIVGR +IVRD+ R+HHF
Sbjct: 680 KYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHF 739
Query: 465 RDGKCSCGDYW 475
+G CSC DYW
Sbjct: 740 SEGICSCRDYW 750
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA--RKVFDQ 188
++ ++ K ++MG+ EL F N I + G C N LA R +FD
Sbjct: 284 YNVMIAGYAQYKRMDMGR---ELFEEMPFPNIGSWN---IMISGYCQNGDLAQARNLFDM 337
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +R+ SW +I+GYA NG + + + +M++ G ++ TF +ACA A++ G
Sbjct: 338 MPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELG 397
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + LAR +FD++ ++L SW+LM++GYA N + D MLF+ M P
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSM----PE 123
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
D ++ + + + V E F+ M + I + ++ +G L EA
Sbjct: 124 KDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI-----SWNGLLAAYVRSGRLEEA-- 176
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
R FE + WE + + G V+ +LGD ++ + D+IP+
Sbjct: 177 ---RRLFESKSD-WELISCNCLMGGYVK-----RNMLGD---ARQLFDQIPV 216
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 19/179 (10%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FDQ+ R+L SW+ MISGYA +G + LFE+ P D T+ + A
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE----SPVRDVFTWTAMVYAYVQ 262
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+ E F+ M + Y +I + E E MPF P + W
Sbjct: 263 DGMLDEARRVFDEMPQKREM-----SYNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWN 316
Query: 302 ALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQS-----ATNMLEEKNR 355
+ + +GD+ +A L D+ P + V + Q+ A NML E R
Sbjct: 317 IMISGYCQNGDLA---QARNLF-DMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKR 371
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
LA VFD + RN S++ MISGY N + + LF++M PH D ++ ++ A
Sbjct: 51 LALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM----PHKDLFSWNLMLTGYA 106
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+++ + F+ M + + A++ +GH+ EA + +RMP + ++ W
Sbjct: 107 RNRRLRDARMLFDSMPE-----KDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS-W 160
Query: 301 EAL 303
L
Sbjct: 161 NGL 163
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+D+ N +I Y + + AR++F++ R++ +W M+ Y +G + +F++
Sbjct: 216 VRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDE 275
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M P + ++ V+ A A + + G FE M P I + +I G
Sbjct: 276 M----PQKREMSYNVMIAGYAQYKRMDMGRELFEEMP-----FPNIGSWNIMISGYCQNG 326
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
L +A + MP +V + +AQ
Sbjct: 327 DLAQARNLFDMMPQRDSVSWAAIIAGYAQ 355
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KD+ N ++ Y + R AR +FD + ++++ SW+ M+SGY +G + +F++M
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
PH + ++ + AA + ++E FE K+D+ ++ +K
Sbjct: 153 ----PHKNSISWNGLLAAYVRSGRLEEARRLFE-SKSDWELISCNCLMGGYVK----RNM 203
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL----------------- 323
L +A + +++P + + +AQ GD+ R E
Sbjct: 204 LGDARQLFDQIPVRDLISWNTMISGYAQ-DGDLSQARRLFEESPVRDVFTWTAMVYAYVQ 262
Query: 324 -GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKM 372
G LD ++ + D++ P+K++ + N++ + Y+ D+ R +E+M
Sbjct: 263 DGMLDEARRVFDEM---PQKREMSYNVMIAG--YAQYKRMDMGRELFEEM 307
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 219/371 (59%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L +C ++ ++E+GK++H + + N L+ MY KC + A F+ +
Sbjct: 396 TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI 455
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ SW+ M++GYA +G G L +FE M+ G PD+ T + V +AC+ + G
Sbjct: 456 EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGT 515
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M DYG++P +HY +I +LG AG L EA++ + MPF+P W AL ++I
Sbjct: 516 EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRI 575
Query: 310 HGDVELEDRAEELLGDLDPSKAIV-----------------DKIPLPPR----KKQSATN 348
HG+ EL ++A E++ ++P + + DK+ R +K +
Sbjct: 576 HGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N++ + D E E+ ++ L+ +MRE GYV T+ VLHD++EE KE L
Sbjct: 636 WVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHML 695
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LA+A+G+++ P P+R++KNLR+C DCH+AIK +SKIVGR +I+RD+ RFHHF
Sbjct: 696 KYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHF 755
Query: 465 RDGKCSCGDYW 475
+G CSCGDYW
Sbjct: 756 NEGFCSCGDYW 766
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 32/226 (14%)
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M +Y + P +HY +I +LG L E AL ++IH
Sbjct: 786 YFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG-----------------ALLGASRIH 828
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE 370
G+ EL ++A ++ + P + + K+ +K + E +N++ + S L+
Sbjct: 829 GNTELGEKAAQMFFKMGPQNSGISKMRDVGVQKVPGYSWFEVQNKIHTF-SVGLF----- 882
Query: 371 KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIK 430
L+ + G++ + + + EE KE+ L+Y SE LA A G+++ P P R++K
Sbjct: 883 ----LSRERENIGFLEELDLKMRER-EEEKERTLKYLSENLAAALGILTIPVGRPNRVMK 937
Query: 431 N-LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ +C DC +AIK MSKIVGR + +RD+ H F + CSCG+YW
Sbjct: 938 KRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESICSCGEYW 980
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+++ N +I YG+ + ARK FD + +R+ SW +I+GYA +G + L +F ++
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
++ G ++ TF + CA A++ G ++ + +K YG + + A++ + G
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAMYFKCG 443
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ EA + E + E V W + HG
Sbjct: 444 SIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 24/174 (13%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+D N +I Y + AR++FD+ R++ +W M+SGY NG + F++
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDE 291
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M P ++ ++ + A + + FE M I + +I G G
Sbjct: 292 M----PEKNEVSYNAMIAGYVQTKKMDIARELFESMP-----CRNISSWNTMITGYGQIG 342
Query: 280 HLIEAEEFVERMPFEPTVEVW--------------EALRNFAQIHGDVELEDRA 319
+ +A +F + MP V W EAL F +I D E +RA
Sbjct: 343 DIAQARKFFDMMPQRDCVS-WAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRA 395
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + LAR +FDQ+ +R+L SW++M++GY N + D LF+ M P
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM----PE 139
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIM 255
D ++ + + A V E F+ M
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N ++ Y + C AR++FD + ++++ SW+ ++SGYA NG + +F+ M
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + AA ++E L FE K+D+ ++ + ++
Sbjct: 169 ----PEKNSISWNGLLAAYVHNGRIEEACLLFE-SKSDWDLIS----WNCLMGGFVRKKK 219
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L +A ++MP + + +AQ G
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGG 250
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 129 DVFSSLLDSCGNLKSIEMG--KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D+FS + G +++ +G +R+ +L+ KDV N L+ Y + AR+VF
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYAQNGYVDEAREVF 165
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D + ++N SW+ +++ Y NG+ + +LFE
Sbjct: 166 DNMPEKNSISWNGLLAAYVHNGRIEEACLLFE 197
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 223/383 (58%), Gaps = 26/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
MG + G+ + S LL +C L ++ +G+RVH + V++ +N L+++Y KC
Sbjct: 228 MGSEGVEPDGFTMVS-LLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N R A+KVFD++ +R++ SW +I G A NG G + L LF ++ + G P + TF+ V
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC+ + EGF YF MK +YGI+P IEH+ ++ +L AG + +A +++ MP P
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNA 406
Query: 298 EVWEALRNFAQIHGDVELED--RAE------------ELLGDLDPSK------AIVDKIP 337
+W L IHG +EL + RAE LL +L S+ V KI
Sbjct: 407 VIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIM 466
Query: 338 L-PPRKKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVL 392
L KK +++E KNRV ++ RS Y + + ++ GYVP T VL
Sbjct: 467 LMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVL 526
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
DI+EE KE AL +H+E++AIA+ L++TPP P+RI+KNLR+C DCH AIK++SK+ RE
Sbjct: 527 ADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFERE 586
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+IVRD RFHHF+DG CSC DYW
Sbjct: 587 IIVRDRSRFHHFKDGSCSCKDYW 609
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 114 AIEYMGQDASASA---GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
A+E Q +AS+ F L + L + +G+ +H ++ + F + N L+
Sbjct: 119 AVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLV 178
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
MY + A +VF+ + R+ +W+ +I+G+A NG + L L+ +M G PD
Sbjct: 179 HMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGF 238
Query: 231 TFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
T + + +AC A+ G ++ ++K G+V A++ + G+ +A++ +
Sbjct: 239 TMVSLLSACVELGALALGERVHMYMVK--VGLVQNQHASNALLDLYSKCGNFRDAQKVFD 296
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
M E +V W +L ++G L + A +L G+L+
Sbjct: 297 EME-ERSVVSWTSLIVGLAVNG---LGNEALKLFGELE 330
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLI-EMYGKCCNTRLARKVFDQLR 190
SL+ CG+ +S K++H +R ++ + N LI + A ++F+Q++
Sbjct: 39 SLVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG- 248
N+ +W+ MI G+A + + + LF QM PD TF +F A A V G
Sbjct: 97 APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ +++N + + +++ +++ + G L A + E M + V W ++ N
Sbjct: 157 GIHSVVVRNGFDSLRFVQN--SLVHMYSVLGSLXSAYQVFEIMSYRDRV-AWNSVINGFA 213
Query: 309 IHG 311
++G
Sbjct: 214 LNG 216
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 216/371 (58%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S++ SC NL S+E G + H S + + ++N LI +YGKC + + ++FD++
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ SW ++SGYA G+ + + LFE+M G PD TF+ V +AC+ A V+ G
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE M D+GI+P +HY +I + G AG L EA+ F+ +MPF P W L + ++
Sbjct: 493 QYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRL 552
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATN 348
+G+ E+ A E L +LDP +K + R +K+ +
Sbjct: 553 YGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFS 612
Query: 349 MLEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ K++V +D +S+ Y +++ LN +M E GYVPD VLHD+++ K K L
Sbjct: 613 WIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKML 672
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIA+GL+ P +P+R++KNLR+CGDCHNA K +SKI RE++VRD RFH F
Sbjct: 673 NHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLF 732
Query: 465 RDGKCSCGDYW 475
+DG CSCGD+W
Sbjct: 733 KDGTCSCGDFW 743
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGN 140
H D + + L N L E + + M Q+ A Y F S+L +CG
Sbjct: 228 HGMKERDSISWTTMITGLIQNGL----EAEAMDLFRDMRQEGMAMDQY-TFGSVLTACGG 282
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
L++++ GK +H L+ S + +V + + L++MY KC + R A VF ++ +N+ SW M
Sbjct: 283 LRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
+ GY NG + + +F M++ G PD T V ++CA+ +++EG F G
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEG-AQFHCQALVSG 401
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRA 319
++ I A+I + G G + ++ + + M F V W AL +AQ E D
Sbjct: 402 LISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVS-WTALVSGYAQFGKANETIDLF 460
Query: 320 EELL 323
E +L
Sbjct: 461 ERML 464
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 109 GKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
G V EA++ M +D + FS++L + +++G+++H + F V +
Sbjct: 116 GSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFV 175
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLS------------------------------ 195
+ L++MY K +A +VFD++++RN+
Sbjct: 176 GSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDS 235
Query: 196 -SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
SW MI+G NG A+ + LF MR+ G D+ TF V AC A+KEG
Sbjct: 236 ISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEG 289
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
C ++ K++H L+ S + L N LI Y K N AR VFD++ + N SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 198 HLMISGYAANG 208
+ M+S Y+ +G
Sbjct: 75 NTMLSAYSKSG 85
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 200/369 (54%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ GK VH+L+++ +++ ++ LI+MY KC N A ++FD +
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N +W+ MI GY +G G + L LF +M G P TFL V AC+ A V+EG
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M N Y I P EHY ++ +LG AG L +A EF+ +MP EP VW L IH
Sbjct: 530 FHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHK 589
Query: 312 DVELEDRAEELLGDLDPSK----AIVDKIPLPPRKKQSATNMLEEKNR------------ 355
D L A E L +LDP ++ I R A ++ E +
Sbjct: 590 DTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLI 649
Query: 356 ---------VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
V RS Y K++ L G+MRE GY +T LHD++EE KE
Sbjct: 650 EVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNV 709
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GLI+T P +RIIKNLR+C DCH A K +SKI R ++VRD RFHHF+D
Sbjct: 710 HSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKD 769
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 770 GICSCGDYW 778
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++ L +Y + LAR++FD+ ++ +++W+ MISGYA +G + LF++M T
Sbjct: 342 VSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTE 401
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ T + +ACA A+ G +++K+ + I A+I + G++ EA
Sbjct: 402 FTPNPVTITSILSACAQLGALSFGKSVHQLIKSK-NLEQNIYVSTALIDMYAKCGNISEA 460
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
+ + + TV W + +HG
Sbjct: 461 SQLFDLTSEKNTV-TWNTMIFGYGLHG 486
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G +H F ++ + + L+++Y K ARKVFD++ R+ W+ MI+G
Sbjct: 121 LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLV 180
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N D + +F+ M G D T V A A + VK G
Sbjct: 181 RNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVG 223
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 52/102 (50%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L + ++ +++G + L F D + LI ++ KC + AR +F +RK
Sbjct: 208 ATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRK 267
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
+L S++ +ISG++ NG+ + F ++ +G T +
Sbjct: 268 PDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMV 309
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 223/383 (58%), Gaps = 26/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
MG + G+ + S LL +C L ++ +G+RVH + V++ +N L+++Y KC
Sbjct: 228 MGSEGVEPDGFTMVS-LLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N R A+KVFD++ +R++ SW +I G A NG G + L LF ++ + G P + TF+ V
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC+ + EGF YF MK +YGI+P IEH+ ++ +L AG + +A +++ MP P
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNA 406
Query: 298 EVWEALRNFAQIHGDVELED--RAE------------ELLGDLDPSK------AIVDKIP 337
+W L IHG +EL + RAE LL +L S+ V KI
Sbjct: 407 VIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIM 466
Query: 338 L-PPRKKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVL 392
L KK +++E KNRV ++ RS Y + + ++ GYVP T VL
Sbjct: 467 LMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVL 526
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
DI+EE KE AL +H+E++AIA+ L++TPP P+RI+KNLR+C DCH AIK++SK+ RE
Sbjct: 527 ADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFERE 586
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+IVRD RFHHF+DG CSC DYW
Sbjct: 587 IIVRDRSRFHHFKDGSCSCKDYW 609
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 114 AIEYMGQDASASA---GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
A+E Q +AS+ F L + L + +G+ +H ++ + F + N L+
Sbjct: 119 AVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLV 178
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
MY A +VF+ + R+ +W+ +I+G+A NG + L L+ +M G PD
Sbjct: 179 HMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGF 238
Query: 231 TFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
T + + +AC A+ G ++ ++K G+V A++ + G+ +A++ +
Sbjct: 239 TMVSLLSACVELGALALGERVHMYMVK--VGLVQNQHASNALLDLYSKCGNFRDAQKVFD 296
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
M E +V W +L ++G L + A +L G+L+
Sbjct: 297 EME-ERSVVSWTSLIVGLAVNG---LGNEALKLFGELE 330
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLI-EMYGKCCNTRLARKVFDQLR 190
SL+ CG+ +S K++H +R ++ + N LI + A ++F+Q++
Sbjct: 39 SLVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG 248
N+ +W+ MI G+A + + + LF QM PD TF +F A A V G
Sbjct: 97 APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLG 155
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 220/370 (59%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL +C + +E GK VH + S N L++MY K + ARK+FD+L
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR++ SW+ +++ YA +G G + + FE+MR+ G P++ +FL V AC+ + + EG+
Sbjct: 316 KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH 375
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y+E+MK D GIV HY+ I+ +LG AG L A F+E MP EPT +W+AL N ++H
Sbjct: 376 YYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 434
Query: 311 GDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNM 349
+ EL A E + +LDP + + K+ KK+ A +
Sbjct: 435 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 494
Query: 350 LEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N + + + D + E K + + +++E GYVPDT +V+ +D++ +E LQ
Sbjct: 495 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 554
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE++A+A+ L++TPP + I KN+R+CGDCH+AIK+ SK VGRE+IVRD RFHHF+
Sbjct: 555 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFK 614
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 615 DGACSCKDYW 624
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++LL C K + G+ VH L S F D+ +NN L+ MY KC + ARKVFD++
Sbjct: 54 YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+R+ +W +ISGY+ + + D L+LF QM + G P++ T V A A+
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAA 164
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G ++H F +V + + L+++Y + A+ VFD L RN SW+ +I+G+A
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
L LF+ M + G P ++ +F AC+S +++G +++ ++K+ +V
Sbjct: 231 RCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 290
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ++ + +G + +A + +R+ V W +L HG
Sbjct: 291 GN--TLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG 333
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 209/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C + SI ++H + S F D + N LI+ Y KC R A KVF L
Sbjct: 449 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 508
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ SW+ +ISGYA +GQ AD L LF++M K+ + TF+ + + C S V G
Sbjct: 509 ERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLS 568
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ M+ D+GI P +EHY I+++LG AG L +A +F+ +P P+ VW AL + IH
Sbjct: 569 LFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH 628
Query: 311 GDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
+V L + E LL ++ + +D++ L + +K +
Sbjct: 629 KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSW 688
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K + + + R ++ LN + GY+PD VLHD+D+E K + L
Sbjct: 689 VEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLW 748
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AYGL+ TPP P+RI+KNLR C DCH A ++SKIV RE+IVRD RFHHF
Sbjct: 749 VHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFE 808
Query: 466 DGKCSCGDYW 475
DGKCSCGDYW
Sbjct: 809 DGKCSCGDYW 818
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C N+ ++ GK++H D+ + N L++ Y KC + + K+F LR
Sbjct: 348 LSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 407
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE-GF 249
N SW+ ++ G++ +G G + L +F +M+ + T+ V ACAS +++ G
Sbjct: 408 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQ 467
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ I K+ + I + ++I G++ +A + + + E + W A+ + +
Sbjct: 468 IHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYAL 524
Query: 310 HGD----VELEDR 318
HG +EL DR
Sbjct: 525 HGQAADALELFDR 537
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ N L+ MYGK AR++FD++ +RN+ S+ ++ +A G LF ++R
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 222 KTG 224
G
Sbjct: 155 WEG 157
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L++MY KC + + AR F+ + ++ MIS YA + Q LF ++ ++
Sbjct: 281 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 340
Query: 225 PHPDKETFLVVFAACAS 241
P++ + V AC +
Sbjct: 341 VLPNEYSLSSVLQACTN 357
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ + +CG L +++ GK++H + F N LI MY +C + A +F +
Sbjct: 433 YAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP 492
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MIS +G G + L LF++M G +PD+ +FL V AC + V EGF
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFR 552
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE MK D+GI+PG +HY +I +LG AG + EA + ++ MPFEPT +WEA+ + +
Sbjct: 553 YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTS 612
Query: 311 GDVELEDRAEELLGDLDP---------------SKAIVDKIPLPPR------KKQSATNM 349
GD+EL A + L + P + VD + KK+ +
Sbjct: 613 GDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSW 672
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E N+V + D E Y+ ++ + +MR+ GYVPDT+ VLHD++ KE L
Sbjct: 673 IEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILF 732
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+ +GL++ PP + ++KNLRIC DCH AI MSK VGRE++VRD +RFHHF+
Sbjct: 733 AHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFK 792
Query: 466 DGKCSCGDYW 475
DG+CSCG+YW
Sbjct: 793 DGECSCGNYW 802
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 89/234 (38%), Gaps = 75/234 (32%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSA-FVKDVEL--NNKLIEMYGKCCNTRLARKVF 186
F+S+L +C N+ GK VH +++R FV + L NN L+ Y KC N +AR++F
Sbjct: 297 FTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIF 356
Query: 187 DQLRKRNLSSWH-------------------------------LMISGYAANGQGADGLM 215
D + +++ SW+ +M+SGY G D L
Sbjct: 357 DNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALK 416
Query: 216 LFEQMRKTGPHPDKETFLVVFAAC-----------------------------------A 240
LF +MR P T+ AAC A
Sbjct: 417 LFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYA 476
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
AVKE L F +M N + + A+I LG GH EA E +RM E
Sbjct: 477 RCGAVKEAHLMFLVMPNIDSV-----SWNAMISALGQHGHGREALELFDRMVAE 525
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 40/212 (18%)
Query: 131 FSSLLDSCGNLKSIEM--GKRVHELLRTSAFVKDVELNNKLIEMYGKCCN---TRLARKV 185
F++LL + G+L +I + ++H + S + + N L+ +Y KC + TR ARKV
Sbjct: 160 FTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKV 219
Query: 186 FDQL----------------RKRNLSS---------------WHLMISGYAANGQGADGL 214
D++ R+ ++ + W+ MISGY +G +
Sbjct: 220 LDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAF 279
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AI 271
LF +M D+ TF V +ACA+ G ++ +I++ VP + A+
Sbjct: 280 ELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNAL 339
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G++ A + M + V W +
Sbjct: 340 VTFYSKCGNIAVARRIFDNMTLKDVVS-WNTI 370
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 229/406 (56%), Gaps = 29/406 (7%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
++ +V +L E + +EY+G S+ ++SLL + +I G+++H ++
Sbjct: 438 VDDTNVKDFNLNSEQDLDREVEYVGSGVSSFT----YASLLSGAACIGTIGKGEQIHAMV 493
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
F D+ +NN LI MY KC N A +VF+ + N+ +W +I+G+A +G + L
Sbjct: 494 VKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKAL 553
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF M +TG P+ T++ V +AC+ + E + +F M++++GIVP +EHY ++ +
Sbjct: 554 ELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDL 613
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----- 329
LG +G L EA EF+ MPF+ VW ++H + +L + A +++ + +P
Sbjct: 614 LGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATY 673
Query: 330 ----------------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----Y 369
AI + K++ ++ +E +N+V + D + Y
Sbjct: 674 ILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIY 733
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
EK+ L +++ GYVP+T +VLHD+++E KE+ L HSE+LA+A+ LISTP P+R+
Sbjct: 734 EKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVF 793
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+CGDCH AIK +S + GRE++VRD RFHH +DG CSC DYW
Sbjct: 794 KNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGY--DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFV 160
L + G EAI+ + + S+GY D F+ L+ C ++ + +GK +H + S V
Sbjct: 236 LAQYGYNDEAID-LFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLV 294
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA--DGLMLFE 218
D+ + L++MY KC + ARKVFD +R+ N+ SW +++GY G G + + +F
Sbjct: 295 LDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFS 354
Query: 219 QM-RKTGPHPDKETFLVVFAACAS 241
M + G P+ TF V ACAS
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACAS 378
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCC---NTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+L+T F V + +LI+M+ K C + ARKVFD++R++N+ +W LMI+ A G
Sbjct: 182 VLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGY 241
Query: 210 GADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEH 267
+ + LF E + +G PD+ T + + CA + + G L+ ++++ G+V +
Sbjct: 242 NDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS--GLVLDLCV 299
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+++ + G + EA + + M E V W AL N
Sbjct: 300 GCSLVDMYAKCGLVQEARKVFDGMR-EHNVMSWTALVN 336
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR- 190
S LL C K+ +GK +H L TS D L N LI +Y K + A +F +
Sbjct: 56 SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQ-MRKTGPHPDKETFLVVFAACASAEAVKEG 248
KR++ S+ +IS +A N + +F+Q + + G +P++ F V AC K G
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175
Query: 249 FLYFE-IMKNDY 259
F ++K Y
Sbjct: 176 LCLFGFVLKTGY 187
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 220/370 (59%), Gaps = 28/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ SC L ++++GK +HE ++ F K V++N LI+M+ KC + A +F+ +R R
Sbjct: 236 SVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVR 295
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W MI +A +G G + +FE+M++ G PD+ TFL + AC+ A V++G YF
Sbjct: 296 DTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYF 355
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M YGI PGI+HY ++ +LG AGHL EA FV+++ + T +W L + HG+
Sbjct: 356 YSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGN 415
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPLPP--------------RK--------KQSATNML 350
VE+ R E + +LD + D + L RK K + +
Sbjct: 416 VEMAKRVIERIFELDDAHG-GDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSV 474
Query: 351 EEKNRVSDYRSTD-LYRGEYEKMKGLNGQMRE---AGYVPDTRYVLH-DIDEEAKEKALQ 405
E N V ++ S D ++ E + L+ M+E GYVPDT V H D++EE KE L+
Sbjct: 475 EVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLR 534
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+A+GL++TPP +R+ KNLRICGDCHNA K++S I GR++++RD +RFH F
Sbjct: 535 YHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFE 594
Query: 466 DGKCSCGDYW 475
DGKCSCGD+W
Sbjct: 595 DGKCSCGDFW 604
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSSLL +C + K++ G +H ++ + LI MY +C + AR VFD++
Sbjct: 133 FSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEME 192
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + S++ +I+GYA + Q + L LF +++ + P T L V +CA A+ G
Sbjct: 193 QPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKW 252
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
E +K G + Y+ A+I + G L +A E M T + W A+
Sbjct: 253 IHEYVKK-----KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDT-QAWSAMIVA 306
Query: 307 AQIHGD 312
HGD
Sbjct: 307 FATHGD 312
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL---ARKVFDQL 189
SLL C +L + K++ + D+ + KLI T A +FDQ+
Sbjct: 34 SLLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ +++M GYA + LF ++ +G PD TF + ACAS++A++EG
Sbjct: 91 LDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREG- 149
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVL 275
+ + + + G+ H I I L
Sbjct: 150 ----MGLHCFAVKLGLNHNIYICPTL 171
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 218/373 (58%), Gaps = 29/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +S+L +C L +E GK+VH S + N L+ MY KC A +F +
Sbjct: 467 IVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSM 526
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +++ +W +I GYA NG+G + L ++ M +G PD TF+ + AC+ A V EG
Sbjct: 527 QVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGR 586
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M YGI PG EHY +I + G +G L EA++ +++M +P VW++L + ++
Sbjct: 587 KYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRV 646
Query: 310 HGDVELEDRAEELLGDLDPSKAI----VDKIPLPPRK-----------------KQSATN 348
H ++EL +RA L +L+P A+ + + RK K+ +
Sbjct: 647 HENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCS 706
Query: 349 MLEEKNRVSDYRSTDLYRGE------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
LE +RV+ + S D RG Y K+ + +++EAGYVPD + LHD+D+E KE
Sbjct: 707 WLEINSRVNTFISDD--RGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEV 764
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L YHSE+LA+A+GL++ PP P+RI KNLR+CGDCH+A+K +S++ R +I+RD+ FH
Sbjct: 765 GLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFH 824
Query: 463 HFRDGKCSCGDYW 475
HFR+G+CSCGDYW
Sbjct: 825 HFREGECSCGDYW 837
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-- 190
S+L C +L I+ G+ +H + + F +V + L++MY KC A +F L
Sbjct: 167 SVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD 226
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++N W M++GYA NG G + F M G ++ TF + AC+S A G
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQ 286
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ I+K+ +G ++ A++ + G L A+ +E M + V W +L
Sbjct: 287 VHGFIVKSGFGSNVYVQS--ALVDMYAKCGDLKNAKNMLETMEDDDVVS-WNSLMVGFVR 343
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
HG LE+ A L ++ +D P
Sbjct: 344 HG---LEEEALRLFKNMHGRNMKIDDYTFP 370
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 131 FSSLLDSC--GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F S+L+ C G++ K VH L+ + F ++N L++MY K + A VF++
Sbjct: 369 FPSVLNCCVVGSINP----KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK 424
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ ++++ SW +++GYA N + L +F MR TG +PD+ + +ACA ++ G
Sbjct: 425 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 484
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + +K+ G+ Y +++ + G L +A+ M + + W A+
Sbjct: 485 KQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVI-TWTAI 537
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 25/238 (10%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
K E YM Y F ++L +C ++ + G++VH + S F +V + + L
Sbjct: 248 KAVEFFRYMHAQGVECNQY-TFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSAL 306
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++MY KC + + A+ + + + ++ SW+ ++ G+ +G + L LF+ M D
Sbjct: 307 VDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDD 366
Query: 230 ETFLVVFAACASAE---------AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
TF V C +K GF ++++ N A++ + G
Sbjct: 367 YTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN------------ALVDMYAKTGD 414
Query: 281 LIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVE-LEDRAEELLGDLDPSKAIVDKI 336
+ A E+M E V W +L +AQ + E L+ + + ++P + IV I
Sbjct: 415 MDCAYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASI 471
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 211/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CG L ++E G+ VH + + +V + L++MY KC + AR VFD++ +
Sbjct: 208 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 267
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ MI GYA G + L LF+ M + G HP TF+ + +AC + V EG+ F
Sbjct: 268 DVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 327
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK++YGI P IEHY ++ +LG AGH+ +A E V+ M EP +W L ++HG
Sbjct: 328 NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 387
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+ L ++ ELL G+ D + + KK+ + +E
Sbjct: 388 IALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIE 447
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V ++ + L + Y ++ +NG ++ GY P T VLHDI E KE++L+ H
Sbjct: 448 VNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVH 507
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+T P ++I+KNLR+C DCH K++SKI GR+++VRD RFHHF +G
Sbjct: 508 SEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNG 567
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 568 SCSCGDYW 575
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 37/204 (18%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L C IE GK +H F D+ + L+++Y + + A+++FD +
Sbjct: 78 FSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 191 KRNLSS-------------------------------WHLMISGYAANGQGADGLMLFEQ 219
+++L S W++MI GY NG + L+LF +
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M K P++ T L V +AC A++ G ++N+ GI + A++ + G
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCG 252
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
L +A +++ + V W ++
Sbjct: 253 SLEDARLVFDKID-DKDVVAWNSM 275
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 212/370 (57%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +CG+L + +G+R+HE + ++ L N LI+MY KC + AR VFDQ+
Sbjct: 309 ISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMM 368
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW MIS Y +GQG D + LF++MR +G PD F+ V AAC+ A V EG
Sbjct: 369 FRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRY 428
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +M +YGI PGIEHY ++ +LG AG + EA +MP EP VW +L + +++
Sbjct: 429 CFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVY 487
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM----------------- 349
+ + A + L L P ++ ++ I + Q +
Sbjct: 488 SSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSN 547
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + + D + Y+ + L G+M+E GY+P+T LHD++EE KE L
Sbjct: 548 VEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLA 607
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAI + +++T P +RI KN+R+CGDCH A K++SKI RE+I+RD RFHHFR
Sbjct: 608 VHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFR 667
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 668 DGVCSCGDYW 677
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 60/292 (20%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C ++ +G ++H + ++ + N L+ MYGKC AR+V D++
Sbjct: 140 YPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMP 199
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF-----LVVFAACASAEAV 245
R++ SW+ M++GYA NG+ D L L +M PD T V +C + V
Sbjct: 200 GRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYV 259
Query: 246 KEGF--------LYFEIMKNDY---------------GIVPGIE-HYIAIIKVLGSAGHL 281
K+ F + + +M Y V G+E ++I VL + G L
Sbjct: 260 KDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDL 319
Query: 282 IEA------EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK 335
A E+VER P + + AL +++ + G L ++A+ D+
Sbjct: 320 SAAVLGRRIHEYVERKKLRPNLLLENAL---------IDMYAKC----GCLKEARAVFDQ 366
Query: 336 IPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPD 387
+ R S T+M +S Y + G+ + L +MR++G+ PD
Sbjct: 367 MMF--RDVVSWTSM------ISAYGMS----GQGKDAVALFKKMRDSGFTPD 406
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 19/234 (8%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
D+ + +LD + K++ K++H ++L + L KL+ Y C R +FD
Sbjct: 39 DLCNKILDVNPDAKTL---KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFD 95
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +N+ +++MI Y NG D L++F+ M G +PD T+ V AC+ +
Sbjct: 96 EITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVS----- 150
Query: 248 GFLYFEIMKNDYGIVPGIEH--YI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G L+ + + + G++ YI ++ + G L A ++ MP V +
Sbjct: 151 GNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMV 210
Query: 304 RNFAQ---IHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKN 354
+AQ + ++L E+L L P + + LP S N+L K+
Sbjct: 211 AGYAQNGRFNDALKLCREMEDL--KLKPDAGTMGSL-LPAVTNTSCDNVLYVKD 261
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 206/369 (55%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L +C L S+ GK VH L+++ ++ ++ L++MY KC N A ++FD + +
Sbjct: 415 TTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSE 474
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N +W+ MI GY +G G + L L+ +M G +P TFL V AC+ A V EG
Sbjct: 475 KNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEI 534
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M N Y I P IEHY ++ +LG +G L +A EF+++MP EP VW L IH
Sbjct: 535 FHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHK 594
Query: 312 DVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPRK--KQSATNML 350
D ++ A E L +LDP KA + + RK K ++
Sbjct: 595 DTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLI 654
Query: 351 EEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E VS RS Y K++ L G+MRE GY +T LHD++EE KE A+
Sbjct: 655 EVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNV 714
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GLI+T P +RIIKNLR+C DCH A K +SKI R ++VRD RFHHF+D
Sbjct: 715 HSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKD 774
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 775 GICSCGDYW 783
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 84 NTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKS 143
N D + NA + N + C RE + + G+ S+S L+
Sbjct: 271 NRPDLIAYNAMISGFTANGGTECSVKLFRELL-FSGERVSSST----IVGLIPLHSPFGH 325
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+ + +H S + + ++ +Y K LAR +FD+ ++ + +W+ MISG
Sbjct: 326 LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISG 385
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
Y NG + LF++M KT P+ T + +ACA ++ G ++K++ + P
Sbjct: 386 YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSE-NLEP 444
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I A++ + G++ EA + + M + TV W + +HG
Sbjct: 445 NIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTV-TWNTMIFGYGLHG 491
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C N K + M H ++ + +V + + L+++Y K ARKVFD + +R+
Sbjct: 120 ACSNDKHL-MLLHAHSII--DGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVL 176
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W+ MI+G N D + LF +M G D T V A A + +K G + +
Sbjct: 177 WNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLAL 236
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
K +G + +I + G + A R+ P + + A+ + +G E
Sbjct: 237 KIGFGFCDYV--LTGLISLYSKCGDVNTARLLFRRIN-RPDLIAYNAMISGFTANGGTEC 293
Query: 316 EDRA-EELL--GDLDPSKAIVDKIPL 338
+ ELL G+ S IV IPL
Sbjct: 294 SVKLFRELLFSGERVSSSTIVGLIPL 319
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 211/371 (56%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ + +CG L S++ GK++H L F N LI MY +C + A +F +
Sbjct: 433 YAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP 492
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MIS +G G + L LF++M G +PD+ +FL V AC + V EGF
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQ 552
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE MK D+GI+PG +HY +I +LG AG + EA + ++ MPFEPT +WEA+ + +
Sbjct: 553 YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTS 612
Query: 311 GDVELEDRAEELLGDLDPS--------------------KAIVDKIPLPPR--KKQSATN 348
GD+EL A + L + P A V K+ + R KK+ +
Sbjct: 613 GDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKL-MRDRGVKKEPGCS 671
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E N+V + D E Y+ ++ + +MR+ GYVPDT+ VLHD++ KE L
Sbjct: 672 WIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHIL 731
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLA+ +GL+ PP + ++KNLRIC DCH + MSK VGRE++VRD +RFHHF
Sbjct: 732 FAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHF 791
Query: 465 RDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 792 KDGECSCGNYW 802
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 89/234 (38%), Gaps = 75/234 (32%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSA-FVKDVEL--NNKLIEMYGKCCNTRLARKVF 186
F+S+L +C N GK VH ++ R FV + L NN L+ +Y KC N +AR++F
Sbjct: 297 FTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIF 356
Query: 187 DQLRKRNLSSWH-------------------------------LMISGYAANGQGADGLM 215
D ++ +++ SW+ +M+SGY G D L
Sbjct: 357 DNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALK 416
Query: 216 LFEQMRKTGPHPDKETFLVVFAAC-----------------------------------A 240
LF +MR P T+ +AC A
Sbjct: 417 LFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYA 476
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
AVKE L F +M N + + A+I LG GH EA E +RM E
Sbjct: 477 RCGAVKEANLMFLVMPNIDSV-----SWNAMISALGQHGHGREALELFDRMVAE 525
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 131 FSSLLDSCGNLKSIEM---GKRVHELLRTSAFVKDVELNNKLIEMYGKCCN---TRLARK 184
F++LL + G+L +I + + +L++ A + ++N L+ +Y KC TR ARK
Sbjct: 160 FTALLSAAGHLPNISVRHCAQLQCSVLKSGAG-GVLSVSNALVALYMKCEALEATRDARK 218
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
V D++ ++ +W M+ GY G +FE++
Sbjct: 219 VLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEV 254
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KD ++ Y + + AR VF+++ + W+ MISGY +G + LF +M
Sbjct: 226 KDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRM 285
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
D+ TF V +ACA+A G
Sbjct: 286 VLERVPLDEFTFTSVLSACANAGFFAHG 313
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 215/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++L+ +C L ++E G+++H + D + L++MY KC N AR +F +
Sbjct: 1241 TFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1300
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R ++SW+ MI G A +G + L F+ M+ G PD+ TF+ V +AC+ + V E +
Sbjct: 1301 NTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAY 1360
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M+ +YGI P IEHY ++ L AG + EAE+ + MPFE + ++ L N ++
Sbjct: 1361 ENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRV 1420
Query: 310 HGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQ---SATNMLEE---------- 352
D E R E L L+PS + ++ + + + SA NM+ +
Sbjct: 1421 QVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFS 1480
Query: 353 ----KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
KN+V + + D E Y K++ + ++RE GYVPDT + L D++EE KE +L
Sbjct: 1481 WVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSL 1540
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIAYGL+ TPP LR+IKNLR+CGDCH+AIK +SK+ RE+++RD RFHHF
Sbjct: 1541 YYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHF 1600
Query: 465 RDGKCSCGDYW 475
R+G CSCGDYW
Sbjct: 1601 RNGICSCGDYW 1611
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+ G L ++ GK++H ++ F D+ + + +++MY KC AR+VF ++ + +
Sbjct: 1147 AAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA 1206
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W MISG NGQ L + QMR + PD+ TF + AC+ A+++G ++ I+
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 1266
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
K + P + +++ + G++ +A +R + W A+ HG+ +
Sbjct: 1267 KLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTR-RIASWNAMIVGLAQHGNAK 1322
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA++ ++ D F +L L +E+GK++H ++ S + V
Sbjct: 912 QRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVS 971
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY K + AR VF Q+ + +L SW+ MISG +G + +F + +
Sbjct: 972 VGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDS 1031
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI--EHYI--AIIKVLGSAGH 280
PD+ T V AC+S EG Y + + G+ + ++ A+I V G
Sbjct: 1032 LLPDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGK 1087
Query: 281 LIEAE-EFVERMPFEPTVEVWEALRNFAQIHGD 312
+ EAE FV + F+ + W A+ + + GD
Sbjct: 1088 MEEAEFLFVNQDGFD--LASWNAIMHGYIVSGD 1118
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 22/221 (9%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMI 201
+ +GKR H + TS D + N LI MY KC + ARK+FD R+L +W+ ++
Sbjct: 672 LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731
Query: 202 SGYAANGQGA-DGLMLFEQMRKTGPHPDKETFLVVFAAC--ASAEAVKEGFLYFEIMKND 258
S AA+ + DG LF +R++ + T VF C +++ + E +
Sbjct: 732 SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESL-------HG 784
Query: 259 YGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
Y + G++ + A++ + G + EA + M V +W + + + D
Sbjct: 785 YAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVV-LWNVM---MKAYVDTC 840
Query: 315 LEDRAEELLGDLDPSKAIVDKIPLPP--RKKQSATNMLEEK 353
LE A L + + D + L R + N+LE K
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELK 881
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 132 SSLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C +L+ + ++H + V D ++ LI++Y K A +F
Sbjct: 1040 ASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQD 1099
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L+SW+ ++ GY +G L L+ M+++G D+ T + A +K+G
Sbjct: 1100 GFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQG 1157
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 227/408 (55%), Gaps = 29/408 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD----VFSSLLDSCGNLKSIEMGKRVHE 152
S L + + G R A+E + SA G F +LLD+C L ++ G+++H
Sbjct: 78 SWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHA 137
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ F D+ + N L+ YG+C + A+ VFD +R+R++ SW MIS +A G+ +
Sbjct: 138 AVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDE 197
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
+ L+ +M G PD F+ V AC+++ V+ +F + D + P +EHY ++
Sbjct: 198 AMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMV 257
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA- 331
VLG AG L +AE+ + MPF P ++ + + +++ DVE + A E++ +LDP +
Sbjct: 258 DVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSS 317
Query: 332 -------IVDKIPLPPR-------------KKQSATNMLEEKNRVSDYRSTDLYRGE--- 368
I P KK+ + +E +RV ++ + D +
Sbjct: 318 PYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDE 377
Query: 369 -YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
Y +++ L QM+EAGY DT+ VL D++E+ KE L YHSE+LAIA+GLISTPP PLR
Sbjct: 378 IYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLR 437
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I+KNLR+C DCH A K++SK+ GRE++VRD RFHHF DG CSC DYW
Sbjct: 438 IVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++L S+E G+RVH + + DV + L+ MYGKC + AR F+++
Sbjct: 13 YVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKIS 72
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKEG 248
+ N+ SW M++ YA NG L L+ +M + G P++ TF+ + AC+ A+ EG
Sbjct: 73 RPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEG 132
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 215/369 (58%), Gaps = 26/369 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS++ + + +E G+ VH L + D+ + + L++MYGKC + +VF ++ +
Sbjct: 264 SSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPE 323
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RNL SW+ MISGYA G + LFE+M+ + T + V +AC+ AVK G
Sbjct: 324 RNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEI 382
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
FE M++ Y I PG EHY I +LG AG + A EFV++MP PT+ VW AL N +++G
Sbjct: 383 FESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYG 442
Query: 312 DVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNML 350
+ EL A + L LDP + D+ L + KK + + +
Sbjct: 443 EPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWV 502
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
KN+V +++ D +++ L +M+ AGY+PDT Y L+D++EE K + Y
Sbjct: 503 TAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGY 562
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE++A+A+GLI+ PP +P+RI KNLRICGDCH+A K +S IVGRE+IVRDN RFH FRD
Sbjct: 563 HSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRD 622
Query: 467 GKCSCGDYW 475
+CSC D+W
Sbjct: 623 SQCSCRDFW 631
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L++C + + +++G+++H L+ S F DV + N +I++YGKC LA VF+ +
Sbjct: 162 FCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG 221
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN SW M++ N + ++F RK G V +A A L
Sbjct: 222 RRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISG-----L 276
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
F + + +E I A++ + G G + + E+ MP E + W A+ +
Sbjct: 277 EFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISG 335
Query: 307 AQIHGDVEL 315
GDV++
Sbjct: 336 YAHQGDVDM 344
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK++H + + D + +MY K A+++FD++ RN++ W+ IS
Sbjct: 77 GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+G+ + F + R+ G PD TF ACA A + G
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLG 178
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 217/371 (58%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S++ SC NL S+E G + H L S + + ++N L+ +YGKC + A ++FD++
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ SW +++GYA G+ + + LFE+M PD TF+ V +AC+ A V++G
Sbjct: 435 LFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGC 494
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M+ D+GIVP +HY +I + +G L EAEEF+++MP P W L + ++
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATN 348
GD+E+ A E L ++DP +K +++ R KK+ +
Sbjct: 555 RGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCS 614
Query: 349 MLEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ KN+V +D +S +G YEK++ LN +M E GY PD VLHD+ + K +
Sbjct: 615 WIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMV 674
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIA+GL+ P MP+RI+KNLR+C DCHNA K++SKI GR+++VRD RFH F
Sbjct: 675 SHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKF 734
Query: 465 RDGKCSCGDYW 475
+G CSCGD+W
Sbjct: 735 SNGVCSCGDFW 745
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +CG L ++E GK++H + + + +V + + L++MY KC + + A F ++
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRM 333
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW +I GY NG + + +F +M++ G PD T V ++CA+ +++EG
Sbjct: 334 SCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGA 393
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-R 304
+ + +V G+ HYI A++ + G G + +A + M F V W AL
Sbjct: 394 QFHCL-----ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVS-WTALVT 447
Query: 305 NFAQIHGDVELEDRAEELLG-DLDP 328
+AQ E D E++L D+ P
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDVKP 472
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+V + N +I +C AR++F+ + R+ +W M++G+ NG + L F +M
Sbjct: 204 KNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRM 263
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
R G D+ TF + AC + A+++G
Sbjct: 264 RFQGIAIDQYTFGSILTACGALSALEQG 291
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 212/371 (57%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ + +CG L +++ G+++H L F N L+ MY KC AR VF +
Sbjct: 439 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 498
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MIS +G G + L LF+QM G PD+ +FL + AC A V EGF
Sbjct: 499 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH 558
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE MK D+GI PG +HY +I +LG +G + EA + ++ MPFEPT +WEA+ + + +
Sbjct: 559 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTN 618
Query: 311 GDVELEDRAEELLGDLDPS--------------------KAIVDKIPLPPR--KKQSATN 348
GD+E A + L + P A V K+ + R KK+ +
Sbjct: 619 GDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKL-MRDRGVKKEPGCS 677
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +++ + D E Y+ ++ + +MR+ GYVPDT++VLHD++ KE L
Sbjct: 678 WIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYIL 737
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+ +GL+ PP + ++KNLRICGDCH A+ MSK VGRE++VRD +RFHHF
Sbjct: 738 FAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHF 797
Query: 465 RDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 798 KDGECSCGNYW 808
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 37/179 (20%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-ELLRTSA-FVKD 162
+ G +A E + S D F+S+L +C N GK VH +++R FV +
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 336
Query: 163 VEL--NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL--------------------- 199
L NN L+ +Y K +A+++FD + +++ SW+
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396
Query: 200 ----------MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
M+SGY G D L LF QMR P T+ AAC A+K G
Sbjct: 397 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KD ++ Y + + AR VF+++ + W+ MISGY +G AD LF +M
Sbjct: 232 KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM 291
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGS 277
D+ TF V +ACA+A G ++ +I++ VP + A++ +
Sbjct: 292 VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSK 351
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ A+ + M + V W +
Sbjct: 352 GGKIVIAKRIFDTMNLKDVVS-WNTI 376
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 222/395 (56%), Gaps = 27/395 (6%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
C E VR A M D + S++ SC NL S+E G + H L S ++ + +
Sbjct: 359 CSEEAVR-AFSEMQMDGIKPDDF-TLGSVISSCANLASLEEGAQFHCLALVSGLMRYITV 416
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N L+ +YGKC + A ++FD++ + SW +++GYA G+ + + LFE+M G
Sbjct: 417 SNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGL 476
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD TF+ V +AC+ A V++G YF+ M+ D+GIVP +HY +I + +G EAE
Sbjct: 477 KPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAE 536
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------SKA 331
EF+++MP P W L + ++ G++E+ A E L + DP +K
Sbjct: 537 EFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596
Query: 332 IVDKIPLPPR-------KKQSATNMLEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMR 380
++ R KK+ + ++ KN+V +D +S YEK++ LN +M
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMA 656
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
E GY PD VLHD+ + K + +HSE+LAIA+GLI P MP+RI+KNLR+C DCHN
Sbjct: 657 EEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHN 716
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K +SKI GR+++VRD RFH F DG CSCGD+W
Sbjct: 717 ATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G EA++ + + G D F S+L +CG L ++E GK++H + + + +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDN 312
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V + + L++MY KC + RLA VF ++ RN+ SW MI GY N + + F +M+
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSA 278
G PD T V ++CA+ +++EG + + +V G+ YI A++ + G
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCL-----ALVSGLMRYITVSNALVTLYGKC 427
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRAEELLGD 325
G + +A + M F V W AL +AQ E D E++L +
Sbjct: 428 GSIEDAHRLFDEMSFHDQVS-WTALVTGYAQFGKAKETIDLFEKMLAN 474
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S L+D + I +RV + + K V + N LI +C A+ +F +
Sbjct: 183 VGSPLVDMYAKMGLIRDARRVFQEMEA----KTVVMYNTLITGLLRCKMIEDAKGLFQLM 238
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ +W M++G NG + L +F +MR G D+ TF + AC + A++EG
Sbjct: 239 VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEG 297
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 216/372 (58%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L + +L +++ G R+H L + DV + +I++Y KC A +F+Q
Sbjct: 377 FVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP 436
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+ W+ +ISG +G GA L LF QM++ G PD TF+ + AAC+ A V +G
Sbjct: 437 RRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRN 496
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F +M+ YGI P +HY ++ + G AG L +A +F+ MP +P +W AL +IH
Sbjct: 497 FFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIH 556
Query: 311 GDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPRK----KQSATNM 349
G+VE+ A + L +LDP VD++ R+ K +
Sbjct: 557 GNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSS 616
Query: 350 LEEKNRVSDYRSTDLY--RGEYEKMK----GLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K V+ + S + ++E+++ L ++R GYVPD +VL D++E+ KE+
Sbjct: 617 IEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQI 676
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLAIA+G+I+TPPR PL I KNLR+CGDCHNA K +SKI RE+IVRD+ RFHH
Sbjct: 677 LNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHH 736
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGD+W
Sbjct: 737 FKDGYCSCGDFW 748
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 109 GKVREAIE-YMG-QDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVEL 165
G+V A+E + G +D+ S SL + I G+ VH ++R V D+
Sbjct: 250 GQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK-TG 224
N +++MY K A+++FD + R+ SW+ +I+GY NG ++ + +++ M+K G
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG 369
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P + TF+ V A + A+++G + G+ + +I + G L EA
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQG-TRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEA 428
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
E+ P T W A+ + +HG
Sbjct: 429 MLLFEQTPRRSTGP-WNAVISGVGVHG 454
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L LC+ + EA+ G+ D SS+L C L + +H
Sbjct: 142 LSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGL 201
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++ + N +I++YGK RKVFD + R+L +W+ +ISG+ GQ A + +F
Sbjct: 202 DDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCG 261
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
MR +G PD T L + +A A + G M V I AI+ +
Sbjct: 262 MRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLS 321
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
+ A+ + MP V W L
Sbjct: 322 KIEAAQRMFDSMPVRDAVS-WNTL 344
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
LLR AF + L+ Y + R A + FD++R R++ +W+ M+SG N + A+
Sbjct: 99 LLRGDAFA-----SGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAE 153
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--- 269
+ LF +M G D T V C V G + + Y + G++ +
Sbjct: 154 AVGLFGRMVMEGVAGDAVTVSSVLPMC-----VLLGDRALALAMHLYAVKHGLDDELFVC 208
Query: 270 -AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A+I V G G L E + + M V W ++
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLV-TWNSI 242
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 223/371 (60%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SS+ +C + S+E GK VH + S + N LI+MY K + + A+KVF +L
Sbjct: 309 TYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 368
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+++ SW+ +ISGYA +G GA+ L LFEQM K P++ TFL V AC+ + + EG
Sbjct: 369 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 428
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE+MK + I + H++ ++ +LG AG L EA +F+E MP +PT VW AL ++
Sbjct: 429 YYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRM 487
Query: 310 HGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATN 348
H +++L A E + +LDP + + + KK+ A +
Sbjct: 488 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 547
Query: 349 MLEEKNRVSDYRSTD---LYRGEYEKM-KGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N V + + D R E ++M + ++G+++E GYVPDT +VL ++++ +E L
Sbjct: 548 WVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKL 607
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
QYHSE+LA+A+ ++ TPP + +RI KN+RICGDCH+A K S+++GRE+IVRD RFHHF
Sbjct: 608 QYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHF 667
Query: 465 RDGKCSCGDYW 475
G CSC DYW
Sbjct: 668 LHGMCSCRDYW 678
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 98/183 (53%), Gaps = 4/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SSLL + G S G+++H + +V + + L++MY + + R A+ +F+ L
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N+ SW+ +I+G+A G+G + LF QM + G P T+ VF ACAS+ ++++G
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK 327
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + I + +I + +G + +A++ R+ + V + +AQ
Sbjct: 328 WVHAHVIKSGGQPIAYIGN--TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ 385
Query: 309 IHG 311
HG
Sbjct: 386 -HG 387
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 70/119 (58%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++S +L+ C L+ ++ G+ +H +++S F D+ L N ++ MY KC + A+ +FD++
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKM 166
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW ++ISGY+ +GQ ++ L LF +M G P++ T + A + + G
Sbjct: 167 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
>gi|388507702|gb|AFK41917.1| unknown [Medicago truncatula]
Length = 206
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/188 (72%), Positives = 154/188 (81%), Gaps = 2/188 (1%)
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ FE MK +YGIVPG+EHY+ ++ + G AG L EA EF+E MP E VE+WE LRNFA+I
Sbjct: 1 MQFESMK-EYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEAGVELWETLRNFARI 59
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEY 369
HGD+E ED A+ELL LDPSKA DK+PLP RKKQSA NMLEEKNRVS+YR Y+ E
Sbjct: 60 HGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEEG 119
Query: 370 E-KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
+ K++GL GQMREAGYVPDTRYVLHDIDEE KEKALQYHSERLAIAYGLISTPPR LRI
Sbjct: 120 DVKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI 179
Query: 429 IKNLRICG 436
IKNLRICG
Sbjct: 180 IKNLRICG 187
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 222/371 (59%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S+LL SC ++ +E GK +H L S+ + N L+ MY K + R A KVFD+L
Sbjct: 278 TYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL 337
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K ++ S + M+ GYA +G G + F++M + G P+ TFL V AC+ A + EG
Sbjct: 338 VKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGK 397
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +M+ Y I P + HY I+ +LG AG L +A+ F+E MP EPTV +W AL +++
Sbjct: 398 HYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKM 456
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H + E+ A + + +LDPS A V KI KK+ A +
Sbjct: 457 HKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACS 516
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N V + + D+ + EK+ + LN +++E GYVPDT +VL +D++ KE L
Sbjct: 517 WVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNL 576
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
QYHSE+LA+++ L++TPP +RI+KN+R+CGDCH+AIK +S +V RE+IVRD RFHHF
Sbjct: 577 QYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHF 636
Query: 465 RDGKCSCGDYW 475
DG CSCGDYW
Sbjct: 637 CDGFCSCGDYW 647
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 98/183 (53%), Gaps = 4/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SSL+ CG + S G+++H +V + + L++MY +C A VFD+L
Sbjct: 177 TLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKL 236
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+GYA G+G + L LF +M++ G P + T+ + ++C+S +++G
Sbjct: 237 GCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGK 296
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+L+ +MK+ +V + + ++ + +G + +AE+ +++ V L +AQ
Sbjct: 297 WLHAHLMKSSQKLVGYVGN--TLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQ 354
Query: 309 IHG 311
HG
Sbjct: 355 -HG 356
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++++LL C L ++ GK VH + S F D+ + N L+ MY +C + AR++FD++
Sbjct: 76 LYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEM 135
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ SW MI+GYA N + +D L+LF +M G P++ T + C + G
Sbjct: 136 PHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCG- 194
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
YG + +++ + G+L EA +++ + V W AL
Sbjct: 195 RQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS-WNAL 247
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 218/370 (58%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L +CG+L ++ +G+R+HE + ++ L N LI+MY +C A++VFD+++
Sbjct: 291 FASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMK 350
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+++SW +IS Y GQG + + LF +M +G PD F+ + +AC+ + + EG +
Sbjct: 351 FRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRI 410
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M +DY I P IEHY ++ +LG AG + EA +++MP EP VW L + ++
Sbjct: 411 YFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVF 470
Query: 311 GDVELEDRAEELLGDLDPS------------------KAIVDKIPLPPRKKQSAT---NM 349
++++ A + L L P K + + + RKK T +
Sbjct: 471 TNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISN 530
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E N+V + + D + YE++ L +M+E GYVP+T LHD++EE KE L
Sbjct: 531 VELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLA 590
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAI + L++T +RI KNLR+CGDCH A K++SKIV RE+IVRD RFHHF+
Sbjct: 591 VHSEKLAIVFALLNT-QEYQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFK 649
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 650 DGVCSCGDYW 659
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + + LD ++K++ K++H ++ ++ L KL+ Y C L RKVFD
Sbjct: 21 FGLLAKALDQNPDIKTL---KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFD 77
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ RN+ +++MI Y N + DGL++F +M G PD T+ V AC+ +E ++
Sbjct: 78 EMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRY 137
Query: 248 GFL-YFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G L + +++K D+ + G +I + G G L EA + M ++ V W ++
Sbjct: 138 GLLIHGDVLKVGLDFNLFVG----NGLIAMYGKCGCLFEARRVFDEMIWKDVVS-WNSM 191
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C +++ G +H + ++ + N LI MYGKC AR+VFD++
Sbjct: 122 YPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI 181
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ M++GYA N + D L + +M G PD T + A A+ + E L
Sbjct: 182 WKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS--ENVL 239
Query: 251 YFE 253
Y E
Sbjct: 240 YVE 242
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N K+F L ++NL SW++MI Y N + L+ QM K PD TF V
Sbjct: 237 NVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLP 296
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC A+ G E ++ + P + ++I + G L +A+ +RM F V
Sbjct: 297 ACGDLSALLLGRRIHEYVEKK-KLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR-DV 354
Query: 298 EVWEAL 303
W +L
Sbjct: 355 ASWTSL 360
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 206/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL C +++MGK H + DV L LI+MY KC + A+++F + R
Sbjct: 338 SLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDR 397
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W++M++GY +G G L LF +M G P+ TF+ AC+ A V EG F
Sbjct: 398 DICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLF 457
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M +D+G+VP +EHY ++ +LG AG L EA + +E MP P + +W A+ +IH +
Sbjct: 458 EKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKN 517
Query: 313 VELEDRAEELLGDLDPS----KAIVDKIPLPPR-----------------KKQSATNMLE 351
+ + A L L+P K ++ I KK+ + +E
Sbjct: 518 SNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIE 577
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQYH 407
V D++ D EK+ + +M +EAGY+PDT VLH+IDEE KE AL YH
Sbjct: 578 VNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYH 637
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLIST P P+R++KNLRIC DCH K++SKI R +IVRD RFHHFR+G
Sbjct: 638 SEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREG 697
Query: 468 KCSCGDYW 475
CSCG YW
Sbjct: 698 SCSCGGYW 705
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ SCG + ++++GKR+H + + F + L L++MYGKC R AR +FD ++ +
Sbjct: 237 SLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNK 296
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W MIS YA LF QMR G P++ T + + + CA A+ G +F
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWF 355
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ G+ + A+I + G + A+ + + W + +HG
Sbjct: 356 HAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHG 413
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C + MGK +H + V DV + N L++MY +C + AR +FD++
Sbjct: 111 IIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKM 170
Query: 190 ----------------------RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
+R++ SW MI+GY +G LF +M + P
Sbjct: 171 SERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFP 230
Query: 228 DKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ T L + +C AV+ G L+ I++N +G+ + A++ + G G + A
Sbjct: 231 NDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA--TALVDMYGKCGEIRSARA 288
Query: 287 FVERMPFEPTVEVWEAL 303
+ M V W A+
Sbjct: 289 IFDSMK-NKDVMTWTAM 304
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 206/367 (56%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + N+ ++ G+ H F D+ + + L++MY KC R AR +F+ + RN
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRN 357
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW+ MI GYA +G+ + + LF M+ + PD TF V AC+ A +EG YF
Sbjct: 358 VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFN 417
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M++ +GI P +EHY ++ +LG AG L +A + + +MPFEP +W +L ++HG+V
Sbjct: 418 EMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477
Query: 314 ELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEE 352
L + A E L L+P A + D + KK+ + +E
Sbjct: 478 VLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEI 537
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
KN+V + D + EK+K L +MR G+ P T YVLHD++E+ K+ L HS
Sbjct: 538 KNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHS 597
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A GLIST PL++IKNLRICGDCH A+K +S RE+ VRD RFHHF+DGK
Sbjct: 598 EKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGK 657
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 658 CSCADYW 664
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 37/218 (16%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L + G++ + +G+++H + + D + LI+MYGKC +VFD+
Sbjct: 160 SCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSH 219
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++S + +++G + N Q ++ L LF + G + ++ + A C E
Sbjct: 220 MDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDL 279
Query: 252 FEIMKNDYGIVP-------------------------------GIEHYI----AIIKVLG 276
F M+++ GI P G H I A++ +
Sbjct: 280 FREMQSE-GIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYA 338
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G + +A E MP+ V W A+ +HG+ E
Sbjct: 339 KCGRVRDARMIFEAMPYRNVVS-WNAMIGGYAMHGEAE 375
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 210/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL C ++++GK VH + D LN L++MY KC + A ++F + R
Sbjct: 364 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 423
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +I+G+A +G G + L +F +M + G P+ TF+ + AC+ A V EG F
Sbjct: 424 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 483
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M + +G+VP IEHY ++ +LG AG L EA E ++ MP +P VW AL ++H +
Sbjct: 484 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 543
Query: 313 VELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNMLE 351
+L + A L +++P + + + KK+ +++E
Sbjct: 544 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 603
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQMR----EAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++ D + ++ + +MR EAGYVPDT VL +IDEE KE AL YH
Sbjct: 604 VNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYH 663
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLIST P P+RI+KNLR+C DCH A K++SKI GR +IVRD RFHHFR+G
Sbjct: 664 SEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREG 723
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 724 YCSCGDYW 731
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKS 143
ND G + + + S K + R A+ Q D F S+L +CG +
Sbjct: 80 NDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSW 139
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
++GK +H + +DV + N L+ MYG+C AR VFD++ +R++ SW MI
Sbjct: 140 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRS 199
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIV 262
+ N + L L +M P + + + A ++ G ++ +++N
Sbjct: 200 LSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEH 259
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ A++ + GHL A + + + TV W A+
Sbjct: 260 MGVPTTTALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAM 299
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 33/149 (22%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+++ + ++ MGK +H ++R S V L++MY KC + LAR++F+ L
Sbjct: 230 SMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT 289
Query: 191 KRNLSSWHLMISG-------------------------------YAANGQGADGLMLFEQ 219
++ + SW MI+G YA LF+Q
Sbjct: 290 QKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 349
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
MR +G P K T + + + CA A A+ G
Sbjct: 350 MRTSGVRPTKVTIVSLLSLCAVAGALDLG 378
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 207/340 (60%), Gaps = 26/340 (7%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV + LI+MY KC +AR++FD R R++ +W+ MI GY ++G G + LFE+M
Sbjct: 355 QDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEM 414
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ TG P++ TFL V AAC+ A V EG YF MK DYG+ PG+EHY ++ +LG AG
Sbjct: 415 KGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGK 474
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-------- 332
L EA F++ MP EP + V+ A+ ++H +VEL + + +++ +L P + +
Sbjct: 475 LDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANI 534
Query: 333 ---------VDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDL----YRGEYEKMKGL 375
V ++ K K ++++ KN V + S + Y ++ L
Sbjct: 535 YANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKL 594
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
++++ GYVPDT + HD++++ K + L HSE+LAIAYGLI T P ++I KNLR+C
Sbjct: 595 IEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVC 653
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCHNA K++S + GRE+I+RD +RFHHF+DGKCSCGDYW
Sbjct: 654 NDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRN 193
L +CG L ++ +RVHELL +V + N LI Y KC LA +VF++L K+
Sbjct: 227 LQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKT 286
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
SW+ MI G+ N D LF +M+ PD T + V A A
Sbjct: 287 RISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVA 333
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++LL C + G+ VH L + + L MY KC AR+VFD++
Sbjct: 19 FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMP 78
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMR--KTGPHPDKETFLVVFAACASAEAV 245
R+ +W+ +++GYA NG + + +M+ + G PD T + V ACA A A+
Sbjct: 79 SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C + +++ + VH + + V ++ +++ Y KC AR VFD + R
Sbjct: 124 SVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR 183
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
N SW+ MI GYA NG + + LF +M + G + L AC
Sbjct: 184 NSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQAC 230
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 220/375 (58%), Gaps = 32/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+++L +C + ++E G VH + DV + + L++MY KC A + F+ +
Sbjct: 410 TFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLM 469
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RNL SW+ MISGYA +G G + L LF +M+ +G PD TF+ V +AC+ V EGF
Sbjct: 470 PVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGF 529
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M YG+VP +EHY ++ +LG AG L + E F+ +MP +P + +W + A
Sbjct: 530 EYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLG-ACC 588
Query: 310 HGD---VELEDRAEELLGDLDPSKAIVDKIPL----------------------PPRKKQ 344
G+ EL RA E+L ++DP A V+ + L KK+
Sbjct: 589 RGNGRKTELGRRAAEMLFNMDPQNA-VNYVLLSNMYASGGKWEDMARTRRAMREAAVKKE 647
Query: 345 SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ + + K+ V + + D E Y K+K L+ ++R+AGYVP ++ L+D++ E K
Sbjct: 648 AGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENK 707
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+ L YHSE+LA+A+ +++ +P+RI+KNLR+CGDCH+A K +SK+V R +++RD+ R
Sbjct: 708 EELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNR 766
Query: 461 FHHFRDGKCSCGDYW 475
FHHF DGKCSC DYW
Sbjct: 767 FHHFEDGKCSCRDYW 781
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
D + N+ + LD N C E V+ + M + + + + S+L SC +L I +
Sbjct: 168 DSVSWNSMITGLDQNK---CFEDAVK-SYNSMRKTGLMPSNFALISAL-SSCASLGCILL 222
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA--RKVFDQLRKRNLSSWHLMISGY 204
G++ H DV ++N L+ +Y + +RLA +KVF + +R+ SW+ +I
Sbjct: 223 GQQTHGEGIKLGLDMDVSVSNTLLALYAE--TSRLAECQKVFSWMLERDQVSWNTVIGAL 280
Query: 205 AANGQG-ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIV 262
A +G ++ + +F +M + G P++ TF+ + A +S K ++ I+K +
Sbjct: 281 ADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDD 340
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
IE+ A++ G +G + EE RM
Sbjct: 341 NAIEN--ALLACYGKSGEMENCEEIFSRM 367
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 147 GKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G++VH +RT V + N LI MY KC + AR VF + ++ SW+ MI+G
Sbjct: 121 GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLD 180
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N D + + MRKTG P + ++CAS + G
Sbjct: 181 QNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLG 223
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F D+ L N LI +Y + + ARK+FD++ RN +W +ISGY NG D +
Sbjct: 30 GFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVL 89
Query: 218 EQMRKTGPHPDKETFLVVFAAC 239
++M G P++ F AC
Sbjct: 90 KEMIFEGFLPNRFAFGSAIRAC 111
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 214/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ SC NL S+E G + H TS + + ++N L+ +YGKC + + ++F+++ +
Sbjct: 381 SVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 440
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W ++SGYA G+ + + LFE M G PDK TF+ V +AC+ A V++G F
Sbjct: 441 DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIF 500
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M N++GIVP +HY +I + AG + EA F+ +MPF P W L + + +G+
Sbjct: 501 ESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGN 560
Query: 313 VELEDRAEELLGDLDP----SKAIVDKIPLPPRK-----------------KQSATNMLE 351
+++ A E L +LDP S ++ + K K+ + ++
Sbjct: 561 MDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIK 620
Query: 352 EKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
KN+V +D +S Y +++ LN +M + GYVPD VLHD+ + K K L +H
Sbjct: 621 YKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHH 680
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL+ PP +P+R++KNLR+C DCHNA K +SKI RE++VRD RFH F+DG
Sbjct: 681 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDG 740
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 741 TCSCGDFW 748
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +CG + +++ GK+VH + + + ++ + + L++MY KC N + A VF ++
Sbjct: 277 TFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKM 336
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW M+ GY NG + + F M+K G PD T V ++CA+ +++EG
Sbjct: 337 TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG- 395
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
F G++ I A++ + G G + ++ + F+ V W AL +AQ
Sbjct: 396 AQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEV-TWTALVSGYAQ 454
Query: 309 IHGDVELEDRAEELLG-DLDPSKA 331
E E +L L P K
Sbjct: 455 FGKANETIGLFESMLAHGLKPDKV 478
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 35/218 (16%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
+ D S + FS+LL +++G+++H + F+ V + + L++MY K
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192
Query: 178 NTRLARKVFDQL-------------------------------RKRNLSSWHLMISGYAA 206
ARKVFD+L R+R+ SW MI+G+
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
NG D + +F +M+ D+ TF V AC A++EG ++ I++ DY I
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK--DNI 310
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ + ++ AE ++M + V W A+
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVS-WTAM 347
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LL C + K +H +++T + + LNN LI Y K + A KVFDQ+
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNN-LISSYAKLGSIPYACKVFDQM 70
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
NL SW+ ++S Y+ G+ ++ LF+ M P D ++ + + A + +
Sbjct: 71 PHPNLYSWNTILSAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSV 126
Query: 250 LYFEIM-KND 258
+ +M KND
Sbjct: 127 KAYNLMLKND 136
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 223/418 (53%), Gaps = 32/418 (7%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKS 143
N P+R + SL L + G V EA+ + A FSSL+ CGNL S
Sbjct: 230 NLPVRDHILWNSL---LAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLAS 286
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+ GK++H + F +V +++ LI+MY KC +A +FD++ ++ SW MI G
Sbjct: 287 LRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMG 346
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
YA +G + L+LFE+M P+ TFL V AC+ A V +G+ YF+ M N YGIVP
Sbjct: 347 YALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVP 406
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+EH+ A+ LG AG L EA F+ +M +PT VW L ++H + L + + +
Sbjct: 407 TLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKI 466
Query: 324 GDLDPSKAIVDKIPLP----------------------PRKKQSATNMLEEKNR----VS 357
+L+P ++I + L KK A + +E K++ V+
Sbjct: 467 MELEP-RSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVA 525
Query: 358 DYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
RS Y + + + QM G+VP+T V DI+EE K L HSE+LAI +G+
Sbjct: 526 HDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGI 585
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
ISTP +R++KNLR+C DCH K +SK+ RE++VRD RFHHF+DG CSCGD+W
Sbjct: 586 ISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELL 154
S + +L +EG+ EA+ ++ + D F S++L ++ G VH
Sbjct: 137 SWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFA 196
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ F DV + + LI+MY C T + KVFD L R+ W+ +++G A NG + L
Sbjct: 197 FRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEAL 256
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----A 270
+F +M + G P TF + C + +++ F + Y I G E + +
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPVCGNLASLR-----FGKQLHAYVICGGFEDNVFISSS 311
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+I + G + A ++M P V W A+ +HG
Sbjct: 312 LIDMYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALHG 351
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 31/169 (18%)
Query: 108 EGKVREAIE-YMGQDASASAGYDVFSSL---LDSCGNLKSIEMGKRVHEL-LRTSAFVKD 162
EG +A+ ++ ASA+ V +SL L SC L +G +H L +R+ AF D
Sbjct: 26 EGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFA-D 84
Query: 163 VELNNKLIEMYGKCCNTRL-------------------ARKVFDQLRKRNLSSWHLMISG 203
N L+ +Y K + L RKVFD++ +R++ SW+ ++ G
Sbjct: 85 RFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLG 144
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDK---ETFLVVFAACASAEAVKEGF 249
A G+ + L +M + G PD T L +FA CA VK G
Sbjct: 145 CAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECAD---VKRGL 190
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 225/376 (59%), Gaps = 36/376 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELL-----RTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
+SS+L +C ++ S+E GK VH L+ + AFV N L++MY K + A+K
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFV-----GNTLLDMYAKSGSIEDAKK 275
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
VFD+L KR++ SW+ M++GY+ +G G L FE+M +T P+ TFL V AC+ A
Sbjct: 276 VFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGL 335
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ EG YF++MK Y + P I HY+ ++ +LG AGHL A +F+ MP +PT VW AL
Sbjct: 336 LDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394
Query: 305 NFAQIHGDVELEDRAEELLGDLD---PSKAIV--DKIPLPPR----------------KK 343
++H ++EL A E + +LD P ++ + L R KK
Sbjct: 395 GACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKK 454
Query: 344 QSATNMLEEKNRVSDYRSTD---LYRGEYEKM-KGLNGQMREAGYVPDTRYVLHDIDEEA 399
+ A + +E +N V + + D R E M + ++ +++E GYVPD+ +VL +D++
Sbjct: 455 EPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQE 514
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
+E LQYHSE+LA+A+ L++TPP +RI KN+RICGDCH+A K +SK+V RE+IVRD
Sbjct: 515 REAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTN 574
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF DG CSC DYW
Sbjct: 575 RFHHFCDGACSCEDYW 590
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 7/193 (3%)
Query: 115 IEYMGQDASASAGY-DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
+E + Q +AG ++ +LL C +L + GK +H LL S F D+ + N L+ +Y
Sbjct: 1 MELIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLY 60
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
KC + ARK+FD++ R++ +W +I+GY+ + + D L+L +M + G P++ T
Sbjct: 61 AKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLA 120
Query: 234 VVFAACA---SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
+ A + S + ++ L+ ++ YG + AI+ + HL EA+ +
Sbjct: 121 SLLKAASGVGSTDVLQGRQLHGLCLR--YGYDSNVYVSCAILDMYARCHHLEEAQLIFDV 178
Query: 291 MPFEPTVEVWEAL 303
M + V W AL
Sbjct: 179 MVSKNEVS-WNAL 190
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 130 VFSSLLDSCGNLKSIEM--GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+SLL + + S ++ G+++H L + +V ++ +++MY +C + A+ +FD
Sbjct: 118 TLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFD 177
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ +N SW+ +I+GYA GQG LF M + P T+ V ACAS ++++
Sbjct: 178 VMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQ 237
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G +++ ++K +V + + ++ + +G + +A++ +R+ V L +
Sbjct: 238 GKWVHALMIKWGEKLVAFVGN--TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGY 295
Query: 307 AQIH--GDVELEDRAEELL 323
+Q H G V L+ R EE+L
Sbjct: 296 SQ-HGLGKVALQ-RFEEML 312
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/369 (39%), Positives = 214/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ +GK VH+L+ +F ++ ++ LI+MY KC + A+++F + +
Sbjct: 413 TSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPE 472
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N +W+ MISGY +G G + L LF +M + P TFL V AC+ A V+EG
Sbjct: 473 KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M +D+G P EHY ++ +LG AG+L +A +F+ +MP EP VW AL IH
Sbjct: 533 FRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHK 592
Query: 312 DVELEDRAEELLGDLDPSK----AIVDKI--------------PLPPRKKQSAT---NML 350
D L A + L +LDP ++ I + R+K + T ++
Sbjct: 593 DANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLI 652
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E N + + S D + Y ++ L G+MREAG+ +T LHD++EE KE ++
Sbjct: 653 EVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKV 712
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GLI++ P +RIIKNLR+C DCHNA K +SKI R ++VRD RFHHF+D
Sbjct: 713 HSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKD 772
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 773 GICSCGDYW 781
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L +Y + AR +FD+ +++L+SW+ MISGYA NG + LF++M+K P+
Sbjct: 349 LTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPN 408
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
T + +ACA A+ G +++ N I A+I + G + EA+
Sbjct: 409 PVTVTSILSACAQLGALSLGKWVHDLI-NRESFESNIFVSTALIDMYAKCGSITEAQRLF 467
Query: 289 ERMPFEPTVEVWEALRNFAQIHG 311
MP E W A+ + +HG
Sbjct: 468 SMMP-EKNAVTWNAMISGYGLHG 489
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L K EAI G G+D +++L L+ + +G + L F
Sbjct: 182 LVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSH 241
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L +Y KC AR +F Q+ + +L S++ MISGY N + + LF+++
Sbjct: 242 AYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLV 301
Query: 223 TG 224
+G
Sbjct: 302 SG 303
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ F D+ + + ++ Y K ARKVFD + +R+ W+ M+SG N + ++
Sbjct: 134 VAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAIL 193
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+F M K G D T V A + + G
Sbjct: 194 IFGDMVKGGIGFDSTTVAAVLPGVAELQDLALG 226
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 28/401 (6%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L + G V EA+ + S D F+ S++ + +L K +H L +
Sbjct: 417 ILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLM 476
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
K+V + LI+ + KC + ARK+FD +++R++ +W+ MI GY NG G + L LF +
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNE 536
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M+ P++ TFL V AAC+ + V+EG YFE MK +YG+ P ++HY A++ +LG AG
Sbjct: 537 MQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAG 596
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----------- 328
L +A +F++ MP +P + V A+ +IH +VEL ++ + L DLDP
Sbjct: 597 RLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLAN 656
Query: 329 ---SKAIVDKIPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKG 374
S ++ DK+ +K +++E +N V + S + Y ++
Sbjct: 657 MYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLET 716
Query: 375 LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
L +M+ AGYVPDT + HD++E+ KE+ L HSERLAIA+GL++T + I KNLR+
Sbjct: 717 LGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRV 775
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CGDCH A K +S + GRE+IVRD +RFHHF++G CSCGDYW
Sbjct: 776 CGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C NL +E G+ VH LL DV + N LI MY KC +A VF L+ + +
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+W+ MI GYA NG + L LF +M+ PD T + V A A ++
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQA 464
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHE 152
L S + + + G R A++ + Q A D + S+L + +LK++ +G+ +H
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHG 267
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ F V + +++ Y KC + R AR VF + RN+ SW+ MI GYA NG+ +
Sbjct: 268 YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEE 327
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
F +M G P + + ACA+ ++ G
Sbjct: 328 AFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG 363
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 107 KEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
K +R+A+ + M D YD F+ LL G + G+ +H ++ T+ F ++
Sbjct: 119 KNSTLRDAVRFYERMRCDEVMPVVYD-FTYLLQLSGENLDLRRGREIHGMVITNGFQSNL 177
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
++ +Y KC A K+F+++ +R+L SW+ +++GYA NG + + QM++
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237
Query: 224 GPHPDKETFLVVFAACASAEAVKEG 248
G PD T + V A A +A++ G
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIG 262
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 6/176 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL+ C +LK + ++ L+ + F + KLI ++ K + A +VF+ + +
Sbjct: 50 LLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+H M+ GYA N D + +E+MR P F + ++ G ++
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ N G + A++ + + +A + ERMP V + +AQ
Sbjct: 167 MVITN--GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQ 220
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 228/392 (58%), Gaps = 25/392 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G+ E M + S++L +C + ++ GK +H+ + +V +
Sbjct: 1334 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I+MY KC +A+K FD+++++N+ SW M++GY +G+ + L +F +M + G P+
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 1453
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
TF+ V AAC+ A V+EG+ +F MK+ Y I PGIEHY ++ + G AG L EA +
Sbjct: 1454 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 1513
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-----------------A 331
+RM +P VW +L +IH +V+L + A + L +LDP A
Sbjct: 1514 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWA 1573
Query: 332 IVDKIPLPPRKKQ----SATNMLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAG 383
V+++ + + +Q +++E K RV + D + Y+ ++ L ++++ G
Sbjct: 1574 DVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 1633
Query: 384 YVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIK 443
YVP+ VLHD+DEE KE L+ HSE+LA+A+G++++ P + IIKNLR+CGDCH IK
Sbjct: 1634 YVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIK 1693
Query: 444 IMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
++SK+V R+ +VRD+KRFHHF+DG CSCGDYW
Sbjct: 1694 LISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ +C + + +G+ +H+ + V L LI+MY KC + + A +VF+ + ++
Sbjct: 262 SLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L +W+ MI+ +G G + L LF +M + PD TF+ V AC + VKEG YF
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYF 381
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
M YGI P EHY + ++ + +L EA
Sbjct: 382 TRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ +C N SI++GK VH L F DV + N LI+ Y KC +TR A KVF+++R
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR 187
Query: 191 KRNLSSWHL-------------------------------MISGYAANGQGADGLMLFEQ 219
RN+ SW MI+GY N Q + L LF++
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKR 247
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVL 275
M+ P++ T + + AC + G L +DY I IE + A+I +
Sbjct: 248 MQAENIFPNEYTMVSLIKACT-----EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMY 302
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + +A E E MP ++ W ++ +HG
Sbjct: 303 SKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG 337
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C + + + VH + F + + N L++ Y KC +++KVFD +
Sbjct: 1253 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWM 1312
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW+ MI+ YA +G + L +F M R G + T V ACA A A++ G
Sbjct: 1313 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 1372
Query: 249 -FLYFEIMKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
++ +++K D Y + G +II + G + A++ +RM E V+ W A+
Sbjct: 1373 KCIHDQVIKMDLEYNVCVG----TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVA 1427
Query: 306 FAQIHGDVELEDRAEELL 323
+HG RA+E L
Sbjct: 1428 GYGMHG------RAKEAL 1439
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + SC L + G+ H+ F D+ +++ LI+MY KC + AR +FD++
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 1204
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP--------DKETFLVVFAACA-- 240
RN+ SW MI+GY N Q + L+LF+ + D + V +AC+
Sbjct: 1205 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 1264
Query: 241 SAEAVKEGFLYFEIMK 256
S + + EG F + K
Sbjct: 1265 SGKGITEGVHGFVVKK 1280
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 34/202 (16%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL +C N K + +++H + S D L KLI +Y A +F Q++
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS-----------A 242
+W+L+I NG LML++ M G DK TF V AC +
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 243 EAVKEGF------------LYFEIMKNDYGI-------VPGIEHYIAIIKVLGSAGHLIE 283
+K GF YF+ + + V + + +I L S G L E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 284 AEEFVERMPFEPTVEVWEALRN 305
A + +P + V W A+ N
Sbjct: 210 ARRIFDEIPSKNVVS-WTAMIN 230
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 18/208 (8%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
++ LA + + K N+ SW+ +I+ A G + L F +RK G P + +F
Sbjct: 1091 SSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 1150
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPF 293
+C++ + G M + V G E + A+I + G L +A + +P
Sbjct: 1151 SCSALCDLVSGR-----MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL 1205
Query: 294 EPTVEVWEALRNFAQIHGDVELE--DRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
V W ++ I G V+ E D A L D + V+ P ++L
Sbjct: 1206 RNVVS-WTSM-----ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLS 1259
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQM 379
+RVS T+ G K KG +G +
Sbjct: 1260 ACSRVSGKGITEGVHGFVVK-KGFDGSI 1286
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 207/355 (58%), Gaps = 26/355 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYA 205
GK++H S + V ++N LI MY K N A + FD +R +R+ SW MI A
Sbjct: 432 GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALA 491
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
+G + L LFE M G PD T++ VF+AC A V +G YF++MK+ I+P +
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL 551
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
HY ++ + G AG L EA+EF+E+MP EP V W +L + ++H +++L A E L
Sbjct: 552 SHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL 611
Query: 326 LDPSKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDL 364
L+P + I + KK+ + +E K++V + D
Sbjct: 612 LEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDG 671
Query: 365 YRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIST 420
E Y MK + ++++ GYVPDT VLHD++EE KE+ L++HSE+LAIA+GLIST
Sbjct: 672 THPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLIST 731
Query: 421 PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P + LRI+KNLR+C DCH AIK +SK+VGRE+IVRD RFHHF+DG CSC DYW
Sbjct: 732 PDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ +AI MG F+ ++L S + +E GK+VH + +V ++
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
N L+ MY KC + +A+ VFD++ R++SSW+ MI+ + GQ + FEQM
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 91/241 (37%), Gaps = 56/241 (23%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M +D+ S +S+L +C NL+ + +GK++H + T+ F + N LI MY +C
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 178 NTRLARKVFDQ---------------------------------LRKRNLSSWHLMISGY 204
AR++ +Q L+ R++ +W MI GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS-----------AEAVKEGFLYFE 253
+G + + LF M G P+ T + + +S AVK G +Y
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ N A+I + AG++ A + + E W ++ HG
Sbjct: 449 SVSN------------ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 314 E 314
E
Sbjct: 497 E 497
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 131 FSSLLDSCGNL--KSIE------MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S+LL+ C NL KS+ + VH + S + V L N L+ +Y K A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
RK+FD++ R SW+ ++S Y+ G F+Q+
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 222/394 (56%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EA+ + + D F+ SLL + L ++E+G+RVH L K+ +
Sbjct: 198 GRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVT 257
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+++Y KC R A++VF ++ +RN SW +I G A NG G + L LF++M G
Sbjct: 258 NSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLV 317
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P + TF+ V AC+ + EGF YF MK + GI+P IEHY ++ +L AG + +A E
Sbjct: 318 PSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYE 377
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPR- 341
+++ MP +P +W L IHG + L + A L +L+P + ++ + R
Sbjct: 378 YIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERR 437
Query: 342 ----------------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMRE 381
KK +++E NRV ++ RS + Y ++ + ++
Sbjct: 438 WSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKL 497
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GYVP T VL DI+EE KE+AL YHSE++AIA+ L++TPP P+R++KNLR+C DCH A
Sbjct: 498 EGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMA 557
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK+++KI RE+++RD RFHHFR G CSC DYW
Sbjct: 558 IKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL + ++ G+ +H + + F V + N L+ +Y C +T A KVF+ +++R+
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L +W+ MI+G+A NG+ + L LF +M G PD T + + +A A A++ G
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELG 238
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF + N+ +W+ +I GYA + + + + QM + PD T+ + A +
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130
Query: 242 AEAVKEG 248
+ V+EG
Sbjct: 131 SLNVREG 137
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 216/376 (57%), Gaps = 35/376 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLR-----TSAFVKDVELNNKLIEMYGKCCNTRLARK 184
S +L +C +L +I +GK++H +LR +SA+ + N LI+MY KC + AR
Sbjct: 519 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYF----VANCLIDMYSKCGDVDTARH 574
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
VFD + +++ SW M++GY +G+G++ L +F++MRK G PD TFLVV AC+
Sbjct: 575 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 634
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
V +G YF+ M DYG+ P EHY I +L +G L +A V+ MP EPT VW AL
Sbjct: 635 VDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALL 694
Query: 305 NFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPP------------------RK 342
+ ++H +VEL + A L ++ D S ++ I +K
Sbjct: 695 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 754
Query: 343 KQSATNMLEEKNRVSDY---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
+ + + +K S + RS L Y ++ L +++ GYVP+T + LHD+DEE
Sbjct: 755 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 814
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
K L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +SKIV E++VRD
Sbjct: 815 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 874
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF++G CSCG YW
Sbjct: 875 RFHHFKNGSCSCGGYW 890
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++L +CG+LK++ K VH +R F DV + N LI+ Y KC A KVF+ +
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ SW+ M++GY+ +G LF+ MRK D T+ V A + E
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
F M G +P I+++ S G + E
Sbjct: 389 FRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 423
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFV----------KDVELNNKLIEMYGKCCNTRLA 182
S+L +C +L + G +H + + +D+ + N LI+MY KC + + A
Sbjct: 406 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 465
Query: 183 RKVFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAA 238
R +FD L +RN+ +W +MI G+A G D L LF +M G P+ T + A
Sbjct: 466 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 525
Query: 239 CASAEAVKEG 248
CA A++ G
Sbjct: 526 CAHLAAIRIG 535
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K+G++ AI + A D F+ +L +CG L S G H L+ + F +V
Sbjct: 132 KQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 191
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLS---SWHLMISGYAANGQGADGLMLFEQM- 220
+ N L+ MY +C + A +FD++ +R + SW+ ++S + + L LF +M
Sbjct: 192 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 251
Query: 221 -----RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKV 274
+ T D + + + AC S +AV + ++ ++N G P + A+I
Sbjct: 252 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDA 309
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A + M F+ V W A+
Sbjct: 310 YAKCGLMENAVKVFNMMEFKDVVS-WNAM 337
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 216/371 (58%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL ++ ++ G+++H L + + + N LI MY +C N A +VF+++
Sbjct: 127 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 186
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN+ SW MI+G+A +G L +F +M +TG P++ T++ V +AC+ + EG
Sbjct: 187 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 246
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M ++GIVP +EHY ++ +LG +G L+EA EF+ MP VW L ++
Sbjct: 247 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRV 306
Query: 310 HGDVELEDRAEELLGDLDP-------------SKAIVDKIPLPPRK--------KQSATN 348
HG+ EL A E++ + +P + A K + RK K++ +
Sbjct: 307 HGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCS 366
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +NRV + + + Y+++ L +++E GY+PDT +VLHDI+EE KE+ L
Sbjct: 367 WIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFL 426
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+GLIST P+RI KNLR+CGDCH AIK +S GRE++VRD+ RFHH
Sbjct: 427 FQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHI 486
Query: 465 RDGKCSCGDYW 475
++G CSC DYW
Sbjct: 487 KNGVCSCNDYW 497
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY + ARK FD L ++NL S++ ++ GYA N + + +LF ++ TG
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
TF + + AS A+ +G
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKG 144
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 208/366 (56%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L + NL +E G+++H L+ F D+ + N ++MYGKC K+ Q R+
Sbjct: 718 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 777
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW+++IS +A +G F +M K GP PD TF+ + +AC V EG Y++
Sbjct: 778 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDS 837
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M ++G+ PGIEH + II +LG +G L AE F++ MP P W +L +IHG++E
Sbjct: 838 MTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLE 897
Query: 315 LEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNMLEEK 353
L + E L +LDPS + + ++ KKQ A + ++ K
Sbjct: 898 LARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLK 957
Query: 354 NRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
++V + + Y + ++ G++ +EAGYVPDT + LHD+DEE KE L HSE
Sbjct: 958 DKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSE 1017
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
RLA+A+GLI+TP LRI KNLR+CGDCH+ K +S IVGR++++RD RFHHF GKC
Sbjct: 1018 RLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKC 1077
Query: 470 SCGDYW 475
SCGDYW
Sbjct: 1078 SCGDYW 1083
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
S C G++ EA++ + + + ++ +L C + K+ + G +H L T+ F D+
Sbjct: 7 SACNLGRLAEALKLLSSNPT-RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDL 65
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
LN KLI Y K + AR VFD + +R++ SW M+SGY+ NG+ +LF MR
Sbjct: 66 HLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHC 125
Query: 224 GPHPDKETFLVVF-AACASAEAVKEGFLYFEIMKND 258
G + LV F + C E +L+ +M+ D
Sbjct: 126 GVKANHA--LVDFHSKCGKME--DASYLFGTMMERD 157
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 130 VFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ +SL+ +C + + G +VH + + + DV + L+ YG A+K+F++
Sbjct: 376 MVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE 435
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ N+ SW ++ GY+ +G + L ++++MR+ G ++ TF V ++C E +
Sbjct: 436 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE---DQ 492
Query: 249 FLYFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
L ++++ + YG + ++I + S + EA + M E + W A+ +
Sbjct: 493 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISA 551
Query: 307 AQIHG 311
HG
Sbjct: 552 YAHHG 556
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 51/224 (22%)
Query: 128 YDVFSSLLDSC----GNLKS---IEMGKRVHELLRTSAFVKDV------ELNNKLIEMYG 174
YD+ + LL + G+L+S + G +L ++A + + N LI+MY
Sbjct: 227 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYA 286
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG------------------------ 210
K A++ FD++ ++N+ SW +ISGYA +G G
Sbjct: 287 KSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTML 346
Query: 211 ---------ADGLMLFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGF-LYFEIMKNDY 259
+ + LF QM G P+ + AC+ S EGF ++ ++K
Sbjct: 347 SGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT-- 404
Query: 260 GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
GI+ + A++ GS G + A++ E MP + V W +L
Sbjct: 405 GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSL 447
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G+V + M Q+ S + F+++ SCG L+ +G +V + F V + N
Sbjct: 458 GEVLNVYQRMRQEG-VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANS 516
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
LI M+ + A VFD + + ++ SW+ MIS YA +G + L F MR
Sbjct: 517 LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 569
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+++ G+ +H L+ +V + N L+ +Y + + A VF + +R+L SW+ M++
Sbjct: 592 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 651
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
Y +G+ DGL + ++ + G PD+ T+ + A E E +++++
Sbjct: 652 CYVQDGKCLDGLKILAELLQMGK-PDRVTWNALIGGHAENEEPNEAVKAYKLIRE----- 705
Query: 263 PGI-EHYIAIIKVLGSAGHLIEAEE------FVERMPFEPTVEVWEALRNFAQIHGDVEL 315
GI +YI ++ L + +L EE V ++ FE D+ +
Sbjct: 706 KGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFES----------------DLHV 748
Query: 316 EDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML 350
+ A ++ G ++ +P P + + + N+L
Sbjct: 749 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNIL 783
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V+ N+ L++ + KC A +F + +R++ SW+ MI GYA G D +F M +
Sbjct: 127 VKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLR 186
Query: 223 TGPHPDKETFLVVFAACA 240
G PD T V A A
Sbjct: 187 GGLVPDCYTLGSVLRASA 204
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 215/371 (57%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +L S+ GK++H S + V ++N LI MY K + A + FD +R
Sbjct: 416 LAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIR 475
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ SW MI A +G + L LFE M G PD T++ VF+AC A V +G
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++MK+ I+P + HY ++ + G AG L EA+EF+E+MP EP V W +L + ++
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
+ +++L A E L L+P + I + KK+ +
Sbjct: 596 YKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + D + Y MK + ++++ GYVPDT VLHD++EE KE+ L
Sbjct: 656 WIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQIL 715
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
++HSE+LAIA+GLISTP + LRI+KNLR+C DCH AIK +SK+VGRE+IVRD RFHHF
Sbjct: 716 RHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHF 775
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 776 KDGFCSCRDYW 786
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 51/264 (19%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ +AI MG+ F+ ++L S + +E GK+VH + +V ++
Sbjct: 125 GQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVS 184
Query: 167 NKLIEMYGKCCNTRLARKVFD-------------------------------QLRKRNLS 195
N L+ MY KC + +A+ VFD Q+ +R++
Sbjct: 185 NSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 196 SWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFE 253
+W+ MISGY G L +F +M R + PD+ T V +ACA+ E + G ++
Sbjct: 245 TWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSH 304
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE-RMPFEPTVEVWEALRNFAQIHGD 312
I+ + I + + A+I + G + A +E R + +E + AL + G
Sbjct: 305 IVTTGFDISGIVLN--ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL-----LDGY 357
Query: 313 VELEDRAEELLGDLDPSKAIVDKI 336
++ LGD++ +K I D +
Sbjct: 358 IK--------LGDMNEAKNIFDSL 373
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 89/241 (36%), Gaps = 56/241 (23%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M +D+ S +S+L +C NL+ + +G+++H + T+ F + N LI MY +C
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 178 NTRLARK---------------------------------VFDQLRKRNLSSWHLMISGY 204
AR+ +FD L+ R++ +W MI GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY 388
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS-----------AEAVKEGFLYFE 253
+G + + LF M P+ T + + +S AVK G +Y
Sbjct: 389 EQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSV 448
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ N A+I + AG + A + + E W ++ HG
Sbjct: 449 SVSN------------ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 314 E 314
E
Sbjct: 497 E 497
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 131 FSSLLDSCGNL--KSIE------MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S+LL+ C NL KS+ + VH + S V V L N L+ +Y K A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHA 68
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
RK+FD++ R SW+ ++S YA G F+++
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRL 106
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 216/376 (57%), Gaps = 35/376 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLR-----TSAFVKDVELNNKLIEMYGKCCNTRLARK 184
S +L +C +L +I +GK++H +LR +SA+ + N LI+MY KC + AR
Sbjct: 526 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYF----VANCLIDMYSKCGDVDTARH 581
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
VFD + +++ SW M++GY +G+G++ L +F++MRK G PD TFLVV AC+
Sbjct: 582 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 641
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
V +G YF+ M DYG+ P EHY I +L +G L +A V+ MP EPT VW AL
Sbjct: 642 VDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALL 701
Query: 305 NFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPP------------------RK 342
+ ++H +VEL + A L ++ D S ++ I +K
Sbjct: 702 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 761
Query: 343 KQSATNMLEEKNRVSDY---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
+ + + +K S + RS L Y ++ L +++ GYVP+T + LHD+DEE
Sbjct: 762 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 821
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
K L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +SKIV E++VRD
Sbjct: 822 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 881
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF++G CSCG YW
Sbjct: 882 RFHHFKNGSCSCGGYW 897
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++L +CG+LK++ K VH +R F DV + N LI+ Y KC A KVF+ +
Sbjct: 277 NILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ SW+ M++GY+ +G LF+ MRK D T+ V A + E
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
F M G +P I+++ S G + E
Sbjct: 396 FRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 430
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFV----------KDVELNNKLIEMYGKCCNTRLA 182
S+L +C +L + G +H + + +D+ + N LI+MY KC + + A
Sbjct: 413 SVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 472
Query: 183 RKVFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAA 238
R +FD L +RN+ +W +MI G+A G D L LF +M G P+ T + A
Sbjct: 473 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 532
Query: 239 CASAEAVKEG 248
CA A++ G
Sbjct: 533 CAHLAAIRIG 542
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K+G++ AI + A D F+ +L +CG L S G H L+ + F +V
Sbjct: 139 KQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 198
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLS---SWHLMISGYAANGQGADGLMLFEQM- 220
+ N L+ MY +C + A +FD++ +R + SW+ ++S + + L LF +M
Sbjct: 199 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 258
Query: 221 -----RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKV 274
+ T D + + + AC S +AV + ++ ++N G P + A+I
Sbjct: 259 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDA 316
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A + M F+ V W A+
Sbjct: 317 YAKCGLMENAVKVFNMMEFKDVVS-WNAM 344
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 210/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL C ++++GK VH + D LN L++MY KC + A ++F + R
Sbjct: 404 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 463
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +I+G+A +G G + L +F +M + G P+ TF+ + AC+ A V EG F
Sbjct: 464 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 523
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M + +G+VP IEHY ++ +LG AG L EA E ++ MP +P VW AL ++H +
Sbjct: 524 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 583
Query: 313 VELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNMLE 351
+L + A L +++P + + + KK+ +++E
Sbjct: 584 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 643
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQMR----EAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++ D + ++ + +MR EAGYVPDT VL +IDEE KE AL YH
Sbjct: 644 VNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYH 703
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLIST P P+RI+KNLR+C DCH A K++SKI GR +IVRD RFHHFR+G
Sbjct: 704 SEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREG 763
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 764 YCSCGDYW 771
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ CG ++++GK++H + + F + L L++MYGKC + R AR +FD + R
Sbjct: 303 SLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNR 362
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ W M+S YA LF+QMR +G P K T + + + CA A A+ G
Sbjct: 363 DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 418
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CG + ++GK +H + +DV + N L+ MYG+C AR VFD++ +R
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLY 251
++ SW MI + N + L L +M P + + + A ++ G ++
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++N G+ A++ + GHL A + + + TV W A+
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAM 269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+++ + ++ MGK +H ++R S V L++MY KC + LAR++F+ L
Sbjct: 200 SMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT 259
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ + SW MI+G + + +G LF +M++ P++ T L + C A++ G
Sbjct: 260 QKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQ 319
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT----VEVWEA-LR 304
L+ I++N + + + A++ + G + A R F+ T V +W A L
Sbjct: 320 LHAYILRNGFSVSLALA--TALVDMYGKCSDIRNA-----RALFDSTQNRDVMIWTAMLS 372
Query: 305 NFAQ 308
+AQ
Sbjct: 373 AYAQ 376
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 223/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K K EA + A G F+ SLL ++ ++ G+++H L + +
Sbjct: 239 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 298
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY +C N A +VF+++ RN+ SW MI+G+A +G L +F +M +TG
Sbjct: 299 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 358
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T++ V +AC+ + EG +F M ++GIVP +EHY ++ +LG +G L+EA
Sbjct: 359 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 418
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------SKA 331
EF+ MP VW L ++HG+ EL A E++ + +P + A
Sbjct: 419 MEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASA 478
Query: 332 IVDKIPLPPRK--------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
K + RK K++ + +E +NRV + + + Y+++ L ++
Sbjct: 479 GQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI 538
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E GY+PDT +VLHDI+EE KE+ L HSE++A+A+GLIST P+RI KNLR+CGDCH
Sbjct: 539 KEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCH 598
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +S GRE++VRD+ RFHH ++G CSC DYW
Sbjct: 599 TAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +CGNL G++V+ + N LI MY + ARK FD L
Sbjct: 164 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 223
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ ++ GYA N + + +LF ++ TG TF + + AS A+ +G
Sbjct: 224 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 281
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---NTRLARKVFD 187
+SS+L +C L + +GK++H + DV + L++MY KC + +RKVF+
Sbjct: 59 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 118
Query: 188 QLRKRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
Q+ + N+ SW +I+ YA +G+ + + LF +M P+ +F V AC +
Sbjct: 119 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 173
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A KVFD++ +RNL +W LMI+ +A G D + LF M +G PD+ T+ V +AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 213/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ LL +C L + G+ H ++ + D L +I MYGKC N R A +VFD +
Sbjct: 118 FAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGM 177
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ +W +ISGYA +G + L++F +M++ G PD + L V + C+ A V++G+
Sbjct: 178 SERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGW 237
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F + ++G+ PG +HY +I +LG +G L AE + RMPF+ T W ++
Sbjct: 238 DFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKV 297
Query: 310 HGDVELEDRAEELLGDLDPSKAI----------------VDKIPLPPR----KKQSATNM 349
H D E RA E + +L+P A VD++ + +K +
Sbjct: 298 HSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSS 357
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +RV ++ + D Y ++ L QM +GYVPDT+ VL ++ EE KE+ L
Sbjct: 358 IEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLC 417
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GL+STP LRIIKNLR+CGDCH A K +S+I GRE+ +RD++RFHHF+
Sbjct: 418 FHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQ 477
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 478 DGHCSCGDYW 487
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + L++CG L + +GK +H + + + + L+ MYGK A +VF L
Sbjct: 13 FVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEATRVFRGL 72
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMR---KTGPHPDKETFLVVFAACASAEAVK 246
+++L SW ++S Y+ + L LF +M G PD+ F + ACA+ A
Sbjct: 73 GRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAA 132
Query: 247 EGFL-YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
EG L + I + Y G+ + II + G G+L A E + M TV W + +
Sbjct: 133 EGRLAHRRIQECGYDSSDGVLG-LGIINMYGKCGNLRAAHEVFDGMSERDTV-AWTTIIS 190
Query: 306 FAQIHGDVE 314
HG E
Sbjct: 191 GYAHHGHSE 199
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ G+++H L S + ++N L+ MY KC + A + FD +
Sbjct: 146 ASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPT 205
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ SW +I GYA NG+G L ++QM TG PD TF+ + AC+ + G Y
Sbjct: 206 RDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAY 265
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
FE M YGI PG EHY +I +LG +G L EA+ + +M P VW+AL ++H
Sbjct: 266 FEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHK 325
Query: 312 DVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPRK----KQSATNML 350
++EL + A + L +L+P ++ +I R K+ + +
Sbjct: 326 ELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWI 385
Query: 351 EEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E ++VS + S D L Y K+ + ++EAGYVPD + LHD D+E KE L Y
Sbjct: 386 ETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELGLAY 445
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+GL++ P P+RI KNLR+CGDCH A+K SK+ R +I+RD+ FHHF +
Sbjct: 446 HSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCFHHFTE 505
Query: 467 GKCSCGDYW 475
G+CSCGDYW
Sbjct: 506 GRCSCGDYW 514
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L +EG +A+ + + S D ++ S+L+S ++K ++ VH L+ + F
Sbjct: 13 ILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGF 72
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+NN LI+MY K A VF ++ +++ SW +++GY+ NG + + LF +
Sbjct: 73 EAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCK 132
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
MR +G +PD+ V +ACA + G ++ ++K+ G+ + +++ +
Sbjct: 133 MRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS--GLESSLSVDNSLVTMYAKC 190
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G +++A + MP + W AL
Sbjct: 191 GSIVDANRAFDNMPTRDVIS-WTAL 214
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 231/406 (56%), Gaps = 28/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELL 154
S + +L + G+V EA+ + S D F+ S++ + L K +H L+
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S K++ + L++MY KC +ARK+FD + R++ +W+ MI GY +G G L
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF++M+K P+ T+L V +AC+ + V EG +F+ MK DYG+ P ++HY A++ +
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--- 331
LG AG + EA +F+E MP P + V+ A+ +IH ++E+ ++A + L +L+P +
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656
Query: 332 ------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----Y 369
+ + KK +++E +N V + S + Y
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIY 716
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
++ L +++ AGYVPDT +L D++++ +E+ L HSE+LAIA+GL++T P + +
Sbjct: 717 AFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVR 775
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+CGDCHNA K +S + GRE+IVRD +RFHHF++G CSCGDYW
Sbjct: 776 KNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
L+G A+ SL+ L LC+ M D Y+ F+ LL CG+ ++ GK
Sbjct: 119 LKGYAKNSSLETALAFLCR----------MRYDDVKPVVYN-FTYLLKVCGDNADLKRGK 167
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H L T++F +V ++ MY KC A K+FD++ +R+L SW+ +I+G++ NG
Sbjct: 168 EIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNG 227
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L L +M+ G PD T + V A A + G
Sbjct: 228 FAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C +L +E GK VH+ + D+ + N LI MY KC +A +F+ L R
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
SW+ MI GYA NG+ ++ L F +M+ G PD T + V A A
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA 461
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L S + + + G ++A+E + QD ++L + ++ + +GK +H
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ F K V ++ L +MY KC + AR +FD + ++ + SW+ M+ GY NG+
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +FE+M + G P T + ACA ++ G
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 6/176 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL+ C ++K + ++ L+ + + KL+ ++ K + A +VF+ + +
Sbjct: 55 LLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+ +H M+ GYA N L +MR P F + C +K G ++
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ N + + ++ + + +A + +RMP V + F+Q
Sbjct: 172 QLITNSFA--ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 214/372 (57%), Gaps = 17/372 (4%)
Query: 109 GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK +EAI+ +DA ++L +C ++ ++ +G+R+H+ S + K++ +
Sbjct: 224 GKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVC 283
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI+MY KC A ++FD + +R + SW MI+G AA+G+ D L LF +M TG
Sbjct: 284 NTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+ + AC+ V++G YF M DYGIVP IEHY ++ + AG L EA E
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA 346
F+ MP P VW AL ++H +V+L + A L LD PL
Sbjct: 404 FIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLD---------PLNDGYYVVL 454
Query: 347 TNMLEEKNR---VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+N+ E R V+ R RG +EK L +M+ GYVP+T VL D++E+ KEK
Sbjct: 455 SNIYAEAGRWEDVARVRKLMRDRGTWEK---LLQRMKLKGYVPNTSVVLLDMEEDQKEKF 511
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+ +GLI T P +RI+KNLR+C DCH A+KI+S + RE++VRD RFH
Sbjct: 512 LYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHC 571
Query: 464 FRDGKCSCGDYW 475
F++G CSCGDYW
Sbjct: 572 FKNGSCSCGDYW 583
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 41/218 (18%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S +L +C L + GK VH + ++ L N ++ +Y C +ARKVFD++ +
Sbjct: 117 SFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQ 176
Query: 192 RNLSSWHLMIS-------------------------------GYAANGQGADGLMLFEQM 220
R++ +W++MI+ GYA G+ + + LF +M
Sbjct: 177 RDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEM 236
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLG 276
G P++ T + V ACA G L +D+ G E I +I +
Sbjct: 237 EDAGLLPNEVTVVAVLVACADM-----GNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYV 291
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G L +A + M E TV W A+ HG E
Sbjct: 292 KCGCLEDACRIFDNME-ERTVVSWSAMIAGLAAHGRAE 328
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 223/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L +C + +I+ GKR+H + ++V + +++MY KC +A + F +++
Sbjct: 305 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 364
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW MI+GY +G+G + L +F +M+++G P+ TF+ V AAC+ A + EG
Sbjct: 365 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 424
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ MK ++GI G+EHY ++ +LG AG L EA ++ M +P +W AL + +IH
Sbjct: 425 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 484
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR--KKQSATNMLEEKNRVSD---YRS 361
+VEL + + + L +LD S + ++ I R K +L + R+ Y S
Sbjct: 485 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSS 544
Query: 362 TDL-------YRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+L Y G+ Y ++ L +M+EAGYVP+T VLHD+DEE KE AL+
Sbjct: 545 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 604
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+ L+++ PR + IIKNLR+C DCH A+K ++KI RE+I+RD +RFHHF+
Sbjct: 605 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 664
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 665 DGLCSCRDYW 674
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 132 SSLLDSCGNLKSIEMGKRV---------HELLRTSAFVKDVELNNKLIEMYGKCCNTRL- 181
+S++D L + RV H L+ F ++ + N +++ Y K + L
Sbjct: 193 ASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLE 252
Query: 182 -ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAA 238
ARKVFD + +R++ SW+ MI+ YA NG A+ + L+ +M G + V A
Sbjct: 253 VARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLA 311
Query: 239 CASAEAVKEG 248
CA A A++ G
Sbjct: 312 CAHAGAIQTG 321
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 223/370 (60%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L +C + +I+ GKR+H + ++V + +++MY KC +A + F +++
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW MI+GY +G+G + L +F +M+++G P+ TF+ V AAC+ A + EG
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 423
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ MK ++GI G+EHY ++ +LG AG L EA ++ M +P +W AL + +IH
Sbjct: 424 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 483
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR--KKQSATNMLEEKNRVSD---YRS 361
+VEL + + + L +LD S + ++ I R K +L + R+ Y S
Sbjct: 484 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSS 543
Query: 362 TDL-------YRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+L Y G+ Y ++ L +M+EAGYVP+T VLHD+DEE KE AL+
Sbjct: 544 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 603
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+ L+++ PR + IIKNLR+C DCH A+K ++KI RE+I+RD +RFHHF+
Sbjct: 604 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 663
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 664 DGLCSCRDYW 673
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 132 SSLLDSCGNLKSIEMGKRV---------HELLRTSAFVKDVELNNKLIEMYGKCCNTRL- 181
+S++D L + RV H L+ F ++ + N +++ Y K + L
Sbjct: 192 ASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLE 251
Query: 182 -ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAA 238
ARKVFD + +R++ SW+ MI+ YA NG A+ + L+ +M G + V A
Sbjct: 252 VARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLA 310
Query: 239 CASAEAVKEG 248
CA A A++ G
Sbjct: 311 CAHAGAIQTG 320
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 228/392 (58%), Gaps = 25/392 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G+ E M + S++L +C + ++ GK +H+ + +V +
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I+MY KC +A+K FD+++++N+ SW M++GY +G+ + L +F +M + G P+
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 2326
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
TF+ V AAC+ A V+EG+ +F MK+ Y I PGIEHY ++ + G AG L EA +
Sbjct: 2327 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 2386
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-----------------A 331
+RM +P VW +L +IH +V+L + A + L +LDP A
Sbjct: 2387 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWA 2446
Query: 332 IVDKIPLPPRKKQ----SATNMLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAG 383
V+++ + + +Q +++E K RV + D + Y+ ++ L ++++ G
Sbjct: 2447 DVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 2506
Query: 384 YVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIK 443
YVP+ VLHD+DEE KE L+ HSE+LA+A+G++++ P + IIKNLR+CGDCH IK
Sbjct: 2507 YVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIK 2566
Query: 444 IMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
++SK+V R+ +VRD+KRFHHF+DG CSCGDYW
Sbjct: 2567 LISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ +C + + +G+ +H+ + V L LI+MY KC + + A +VF+ + ++
Sbjct: 262 SLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L +W+ MI+ +G G + L LF +M + PD TF+ V AC + VKEG YF
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYF 381
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
M YGI P EHY + ++ + +L EA
Sbjct: 382 TRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 41/217 (18%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++ +C N SI++GK VH L F DV + N LI+ Y KC +TR A KVF+++
Sbjct: 127 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186
Query: 190 RKRNLSSWHL-------------------------------MISGYAANGQGADGLMLFE 218
R RN+ SW MI+GY N Q + L LF+
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 246
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKV 274
+M+ P++ T + + AC G L +DY I IE + A+I +
Sbjct: 247 RMQAENIFPNEYTMVSLIKACTEM-----GILTLGRGIHDYAIKNCIEIGVYLGTALIDM 301
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + +A E E MP ++ W ++ +HG
Sbjct: 302 YSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG 337
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C + + + VH + F + + N L++ Y KC +++KVFD +
Sbjct: 2126 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWM 2185
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW+ MI+ YA +G + L +F M R G + T V ACA A A++ G
Sbjct: 2186 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 2245
Query: 249 -FLYFEIMKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
++ +++K D Y + G +II + G + A++ +RM E V+ W A+
Sbjct: 2246 KCIHDQVIKMDLEYNVCVG----TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVA 2300
Query: 306 FAQIHGDVELEDRAEELL 323
+HG RA+E L
Sbjct: 2301 GYGMHG------RAKEAL 2312
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + SC L + G+ H+ F D+ +++ LI+MY KC + AR +FD++
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP--------DKETFLVVFAACA-- 240
RN+ SW MI+GY N Q + L+LF+ + D + V +AC+
Sbjct: 2078 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137
Query: 241 SAEAVKEGFLYFEIMK 256
S + + EG F + K
Sbjct: 2138 SGKGITEGVHGFVVKK 2153
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 34/202 (16%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL +C N K + +++H + S D L KLI +Y A +F Q++
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS-----------A 242
+W+L+I NG LML++ M G DK TF V AC +
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 243 EAVKEGF------------LYFEIMKNDYGI-------VPGIEHYIAIIKVLGSAGHLIE 283
+K GF YF+ + + V + + +I L S G L E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 284 AEEFVERMPFEPTVEVWEALRN 305
A + +P + V W A+ N
Sbjct: 210 ARRIFDEIPSKNVVS-WTAMIN 230
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 18/208 (8%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
++ LA + + K N+ SW+ +I+ A G + L F +RK G P + +F
Sbjct: 1964 HSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 2023
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPF 293
+C++ + G M + V G E + A+I + G L +A + +P
Sbjct: 2024 SCSALCDLVSG-----RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL 2078
Query: 294 EPTVEVWEALRNFAQIHGDVELE--DRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
V W ++ I G V+ E D A L D + V+ P ++L
Sbjct: 2079 RNVVS-WTSM-----ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLS 2132
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQM 379
+RVS T+ G K KG +G +
Sbjct: 2133 ACSRVSGKGITEGVHGFVVK-KGFDGSI 2159
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 223/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K K EA + A G F+ SLL ++ ++ G+++H L + +
Sbjct: 234 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 293
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY +C N A +VF+++ RN+ SW MI+G+A +G L +F +M +TG
Sbjct: 294 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 353
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T++ V +AC+ + EG +F M ++GIVP +EHY ++ +LG +G L+EA
Sbjct: 354 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 413
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------SKA 331
EF+ MP VW L ++HG+ EL A E++ + +P + A
Sbjct: 414 MEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASA 473
Query: 332 IVDKIPLPPRK--------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
K + RK K++ + +E +NRV + + + Y+++ L ++
Sbjct: 474 GQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI 533
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E GY+PDT +VLHDI+EE KE+ L HSE++A+A+GLIST P+RI KNLR+CGDCH
Sbjct: 534 KEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCH 593
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +S GRE++VRD+ RFHH ++G CSC DYW
Sbjct: 594 TAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +CGNL G++V+ + N LI MY + ARK FD L
Sbjct: 159 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 218
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ ++ GYA N + + +LF ++ TG TF + + AS A+ +G
Sbjct: 219 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 276
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---NTRLARKVF 186
+SS+L +C L + +GK++H + DV + L++MY KC + +RKVF
Sbjct: 53 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 112
Query: 187 DQLRKRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+Q+ + N+ SW +I+ YA +G+ + + LF +M P+ +F V AC +
Sbjct: 113 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 168
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A KVFD++ +RNL +W LMI+ +A G D + LF M +G PD+ T+ V +AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 33/427 (7%)
Query: 79 TGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAI----EYMGQDASASAGYDVFSSL 134
+ H P+RG L S + L S G+ E + E +G D A G+ + S +
Sbjct: 857 SAHKVFDEMPVRGR-NLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD-FAPDGFTIVS-V 913
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRN 193
L +C ++ +G+RVH + V++ ++N LI++Y KC + AR++F+++ R
Sbjct: 914 LTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 973
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW +I G AANG G + L LF M + P + T + V AC+ V +GF YF+
Sbjct: 974 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 1033
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK DYGI P IEH ++ +LG AG + EA +++ MP EP VW L +H +
Sbjct: 1034 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 1093
Query: 314 ELEDRAEELLGDLDPSKA--------------------IVDKIPLPPR-KKQSATNMLEE 352
EL A E L +LDP + ++ K + R +K +++E
Sbjct: 1094 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 1153
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+N V ++ D E YE + + ++R GY+P T VL DI+EE KE AL YHS
Sbjct: 1154 RNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHS 1213
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
ERLAIA+ L+ + P +P+RIIKNLR+CGDCH A ++SK+ RE+IVRD RFHHF+ G
Sbjct: 1214 ERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGA 1273
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 1274 CSCKDYW 1280
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+ L+ +C L ++ G+ +H + FV V + N L+ +YG C A KVFD++
Sbjct: 807 YPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP 866
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R RNL SW+ M++ +AANG+ + L +F +M PD T + V ACA A+ G
Sbjct: 867 VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALG 926
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G+V A+I + G + +A E M TV W +L
Sbjct: 927 -RRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSL 980
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 223/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K K EA + A G F+ SLL ++ ++ G+++H L + +
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY +C N A +VF+++ RN+ SW MI+G+A +G L +F +M +TG
Sbjct: 474 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 533
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T++ V +AC+ + EG +F M ++GIVP +EHY ++ +LG +G L+EA
Sbjct: 534 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 593
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------SKA 331
EF+ MP VW L ++HG+ EL A E++ + +P + A
Sbjct: 594 MEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASA 653
Query: 332 IVDKIPLPPRK--------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
K + RK K++ + +E +NRV + + + Y+++ L ++
Sbjct: 654 GQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI 713
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E GY+PDT +VLHDI+EE KE+ L HSE++A+A+GLIST P+RI KNLR+CGDCH
Sbjct: 714 KEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCH 773
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +S GRE++VRD+ RFHH ++G CSC DYW
Sbjct: 774 TAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+S LL SC ++ ++GK VH L S D + N LI +Y KC +T AR +F+ +
Sbjct: 29 YSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMG 88
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
KR+L SW M+S +A N + F M + G +P++ F V AC++A G
Sbjct: 89 NKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGE 148
Query: 249 FLYFEIMKNDY---GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE-ALR 304
+Y ++K Y + G E +K +G L A + ++MP E + W +
Sbjct: 149 IIYGFVVKTGYLEADVCVGCELIDMFVK---GSGDLGSAYKVFDKMP-ERNLVTWTLMIT 204
Query: 305 NFAQI 309
FAQ+
Sbjct: 205 RFAQL 209
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +CGNL G++V+ + N LI MY + ARK FD L
Sbjct: 339 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 398
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ ++ GYA N + + +LF ++ TG TF + + AS A+ +G
Sbjct: 399 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 456
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCC-NTRLARKVFDQ 188
F++++ +C N +G+ ++ + + +++ DV + +LI+M+ K + A KVFD+
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ +RNL +W LMI+ +A G D + LF M +G PD+ T+ V +AC
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 241
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---NTRLARKVFD 187
+SS+L +C L + +GK++H + DV + L++MY KC + +RKVF+
Sbjct: 234 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 293
Query: 188 QLRKRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
Q+ + N+ SW +I+ Y +G+ + + LF +M P+ +F V AC +
Sbjct: 294 QMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 213/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ LL +C L + G+ H ++ + D L +I MYGKC N R A +VFD +
Sbjct: 118 FAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGM 177
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ +W +ISGYA +G + L++F +M++ G PD + L V + C+ A V++G+
Sbjct: 178 SERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGW 237
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F + ++G+ PG +HY +I +LG +G L AE + RMPF+ T W ++
Sbjct: 238 DFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKV 297
Query: 310 HGDVELEDRAEELLGDLDPSKAI----------------VDKIPLPPR----KKQSATNM 349
H D E RA E + +L+P A VD++ + +K +
Sbjct: 298 HSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSS 357
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +RV ++ + D Y ++ L QM +GYVPDT+ VL ++ EE KE+ L
Sbjct: 358 IEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLC 417
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GL+STP LRIIKNLR+CGDCH A K +S+I GRE+ +RD++RFHHF+
Sbjct: 418 FHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQ 477
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 478 DGHCSCGDYW 487
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + L++CG L + +GK +H + + + + L+ MYGK A +VF L
Sbjct: 13 FVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEATRVFRGL 72
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMR---KTGPHPDKETFLVVFAACASAEAVK 246
+++L SW ++S Y+ + L LF +M G PD+ F + ACA+ A
Sbjct: 73 ERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAA 132
Query: 247 EGFL-YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
EG L + I + Y G+ + II + G G+L A E + M TV W + +
Sbjct: 133 EGRLAHRRIQECGYDSSDGVLG-LGIINMYGKCGNLRAAHEVFDGMSERDTV-AWTTIIS 190
Query: 306 FAQIHGDVE 314
HG E
Sbjct: 191 GYAHHGHSE 199
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 223/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K K EA + A G F+ SLL ++ ++ G+++H L + +
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY +C N A +VF+++ RN+ SW MI+G+A +G L +F +M +TG
Sbjct: 492 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 551
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T++ V +AC+ + EG +F M ++GIVP +EHY ++ +LG +G L+EA
Sbjct: 552 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 611
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------SKA 331
EF+ MP VW L ++HG+ EL A E++ + +P + A
Sbjct: 612 MEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASA 671
Query: 332 IVDKIPLPPRK--------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
K + RK K++ + +E +NRV + + + Y+++ L ++
Sbjct: 672 GQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI 731
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E GY+PDT +VLHDI+EE KE+ L HSE++A+A+GLIST P+RI KNLR+CGDCH
Sbjct: 732 KEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCH 791
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +S GRE++VRD+ RFHH ++G CSC DYW
Sbjct: 792 TAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKR 149
N E L L+ G++ A + +A D+ +S LL SC ++ ++GK
Sbjct: 6 NPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKL 65
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANG 208
VH L S D + N LI +Y KC +T AR +F+ + KR+L SW M+S +A N
Sbjct: 66 VHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS 125
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY---GIVPG 264
+ F M + G +P++ F V AC++A G +Y ++K Y + G
Sbjct: 126 MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVG 185
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE-ALRNFAQI 309
E +K +G L A + ++MP E + W + FAQ+
Sbjct: 186 CELIDMFVK---GSGDLGSAYKVFDKMP-ERNLVTWTLMITRFAQL 227
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +CGNL G++V+ + N LI MY + ARK FD L
Sbjct: 357 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 416
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ ++ GYA N + + +LF ++ TG TF + + AS A+ +G
Sbjct: 417 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 474
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCC-NTRLARKVFDQ 188
F++++ +C N +G+ ++ + + +++ DV + +LI+M+ K + A KVFD+
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ +RNL +W LMI+ +A G D + LF M +G PD+ T+ V +AC
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 259
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---NTRLARKVFD 187
+SS+L +C L + +GK++H + DV + L++MY KC + +RKVF+
Sbjct: 252 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 311
Query: 188 QLRKRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
Q+ + N+ SW +I+ Y +G+ + + LF +M P+ +F V AC +
Sbjct: 312 QMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 214/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +C +L ++E+GK +H + DV L L++MY KC + A +VF ++
Sbjct: 342 MASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP 401
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ +W +I G A GQG L LF +M+ + PD TF+ V AAC+ A V EG
Sbjct: 402 EKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA 461
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M N YGI P IEHY ++ +LG AG + EAE+ ++ MP P V L + +IH
Sbjct: 462 YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIH 521
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSATNMLE---EKN--------- 354
G++ + +RA + L +LDP + ++ I + ++A M E E+N
Sbjct: 522 GNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSA 581
Query: 355 -----RVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
V ++ D+ + YE + + +++ AGYVPD VL D+DE+ KE L
Sbjct: 582 IEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELS 641
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+GL+ST P P+R++KNLR+C DCH+A+K +S++ RE+IVRD RFHHF
Sbjct: 642 LHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFT 701
Query: 466 DGKCSCGDYW 475
G CSC D+W
Sbjct: 702 KGSCSCRDFW 711
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AS ++L +C + +E K+VH+ + + L + L+++Y KC L
Sbjct: 232 ASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPL 291
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +F+++ ++NL W++MI+G+ + + L LF +M+ +G DK T + AC
Sbjct: 292 ARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTH 351
Query: 242 AEAVKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
A++ G +Y E K + + G A++ + G + A + MP E V
Sbjct: 352 LGALELGKWLHVYIEKEKIEVDVALG----TALVDMYAKCGSIESAMRVFQEMP-EKDVM 406
Query: 299 VWEAL 303
W AL
Sbjct: 407 TWTAL 411
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SL SCG L GK++H F D + N L+ MY C ARKVFD++
Sbjct: 143 FPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 199
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA---EAVKE 247
+++ SW MI YA + + LF +M P++ T + V ACA + E K+
Sbjct: 200 NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQ 259
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
Y + + GI A++ V G A + +MP E + W +
Sbjct: 260 VHKYID----ETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMP-EKNLFCWNIM---- 310
Query: 308 QIHGDVELEDRAEEL 322
I+G VE D E L
Sbjct: 311 -INGHVEDSDYEEAL 324
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 218/400 (54%), Gaps = 39/400 (9%)
Query: 101 NLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV 160
+ L + +EG V +A Y+ S+L +C + ++E K VH ++ V
Sbjct: 712 HFLQMLREGIVPDATTYV--------------SILSACASTGALEWVKEVHNHAVSAGLV 757
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
D+ + N L+ MY KC + AR VFD + +R++ SW +MI G A +G+G + L F +M
Sbjct: 758 SDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKM 817
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ G P+ +++ V AC+ A V EG F M DYGI P +EHY ++ +LG AG
Sbjct: 818 KSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGL 877
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKI 336
L EAE F+ MP EP W AL +G++E+ + A + L P A ++ I
Sbjct: 878 LEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNI 937
Query: 337 --------------PLPPRK---KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGL 375
+ RK K+ + +E NR+ + D E Y ++ L
Sbjct: 938 YAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDL 997
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
+++ GYVPDTR VL + D+E KE+AL HSE+LAI YGL+ T + P+R+ KNLR+C
Sbjct: 998 IERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVC 1057
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH A K +SKI GRE++ RD KRFHHF+DG CSCGDYW
Sbjct: 1058 SDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L + + +++E K VH T A + D+ + N L+ Y KC N + A++VFD +
Sbjct: 628 FINILSANVDEEALEWVKEVHSH-ATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMV 686
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+++W +MI G A +G G D F QM + G PD T++ + +ACAS A++
Sbjct: 687 ERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALE---- 742
Query: 251 YFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEA----EEFVERMPFEPTVEV 299
+ + + N G+V + A++ + G + +A ++ VER F TV +
Sbjct: 743 WVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMI 798
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L +C +++ GK++H + S F DV + L+ MY KC + A+ +FD++
Sbjct: 222 YLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMV 281
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+RN+ SW +MI G A G+G + LF QM++ G P+ T++ + A ASA A++
Sbjct: 282 ERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D FS ++L C + I + K+VH + S +++ + NKL+ +Y +C + AR+VF
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVF 176
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D+L K+N+ W MI GYA G D + ++++MR+ P++ T+L + AC +K
Sbjct: 177 DKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLK 236
Query: 247 EG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ I+++ G + A++ + G + +A+ ++M E V W +
Sbjct: 237 WGKKIHAHIIQS--GFQSDVRVETALVNMYVKCGSIEDAQLIFDKM-VERNVISWTVM 291
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
++E K VH+ + F+ D+ + N LI MY KC + AR VFD + R++ SW+ M+
Sbjct: 438 ALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMG 497
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
G A NG G + +F QM++ G PD T+L + S +A++
Sbjct: 498 GLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALE 541
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 156/383 (40%), Gaps = 75/383 (19%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L++ + ++E K VH + D+ + N L+ MY K + AR VFD +
Sbjct: 323 YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT 382
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ SW +MI G A +G+G + LF QM++ G P+ T+L + ASA A
Sbjct: 383 ERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILN--ASAIASTSALE 440
Query: 251 YFEIM---KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
+ +++ + G + + A+I + G + +A + M + W A+
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVIS-WNAMMGGL 499
Query: 308 QIHG------DVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRV----- 356
+G V L+ + E L+ D ++++ +T+ LE N V
Sbjct: 500 AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN--------THGSTDALEWVNEVHKHAV 551
Query: 357 -----SDYR-------------STDLYRGEYEKMK------------------------G 374
SD+R S D R ++K+
Sbjct: 552 ETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALS 611
Query: 375 LNGQMREAGYVPDTRYVLH----DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIK 430
L QM+ G++PD ++ ++DEEA E + HS A GL+ R+ ++
Sbjct: 612 LFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSH--ATDAGLVDL--RVGNALVH 667
Query: 431 NLRICGDCHNAIKIMSKIVGREL 453
CG+ A ++ +V R +
Sbjct: 668 TYSKCGNVKYAKQVFDDMVERNV 690
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 224/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ +A+E + Q++ +S+L +C NL+S+ GK++H + F +D+
Sbjct: 292 QNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLT 351
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L+ MY KC + L+R+VF + KR+ SW+ MI + +G G + L+LF +M +G
Sbjct: 352 TTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSG 411
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF V + C+ + V EG L F+ M D+ + P +H+ ++ VL AG L EA
Sbjct: 412 VRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEA 471
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVEL----EDRAEELLGDLDPSKAIVDKIPLPP 340
EF+++MP EPT W AL +++ +VEL +R E+ D + ++ I +
Sbjct: 472 YEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSA 531
Query: 341 R-----------------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQM 379
+ K + ++ +NRV + +S D Y + + +M
Sbjct: 532 KLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKM 591
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R AGY+P+T +VL D+D+E KE+ L HSE+LA+A+G+++ +R+ KNLRICGDCH
Sbjct: 592 RIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCH 651
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
NAIK M+KIVG ++IVRD+ RFHHFRDG CSC D+W
Sbjct: 652 NAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMG---QDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
L + + + +L K G+ EAI+Y + S+ +C +L+ + KRVH
Sbjct: 42 LPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVH 101
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
E F DV L N LI+MYGKC + AR VF+ + R++ SW M S Y G
Sbjct: 102 EDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLR 161
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ L F +M G P+ T + AC + +K G
Sbjct: 162 EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSG 198
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 109 GKVREAI---EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
G +REA+ MG + V SS+L +C +LK ++ G+ VH + + +V +
Sbjct: 158 GLLREALGAFRKMGLNGERPNSVTV-SSILPACTDLKDLKSGREVHGFVVRNGMGGNVFV 216
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
++ L+ MY C + R A+ VFD + +R+ SW+++I+ Y N + GL +F +M G
Sbjct: 217 SSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGV 276
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
+ ++ V C ++ M+N G P + I I VL + +L
Sbjct: 277 GLNYASWNAVIGGCMQNGRTEKALEVLSRMQNS-GFKP---NQITITSVLPACTNL---- 328
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
E+LR QIHG
Sbjct: 329 ---------------ESLRGGKQIHG 339
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 25/148 (16%)
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPH 226
K I++Y + + AR +FD++ + +L +W ++IS +G+ + + + R K
Sbjct: 16 KFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75
Query: 227 PDKETFLVVFAACASA-----------EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
PDK L V ACAS +A++ GF ++ N A+I +
Sbjct: 76 PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGN------------ALIDMY 123
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G A E MPF + W ++
Sbjct: 124 GKCRCSEGARLVFEGMPFRDVIS-WTSM 150
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 214/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C +L ++E+GK +H + DV L L++MY KC + A +VF ++ +
Sbjct: 212 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 271
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ +W +I G A GQG L LF +M+ + PD TF+ V AAC+ A V EG Y
Sbjct: 272 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY 331
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M N YGI P IEHY ++ +LG AG + EAE+ ++ MP P V L + +IHG
Sbjct: 332 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 391
Query: 312 DVELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSATNMLE---EKN---------- 354
++ + +RA + L +LDP + ++ I + ++A M E E+N
Sbjct: 392 NLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAI 451
Query: 355 ----RVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
V ++ D+ + YE + + +++ AGYVPD VL D+DE+ KE L
Sbjct: 452 EVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSL 511
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GL+ST P P+R++KNLR+C DCH+A+K +S++ RE+IVRD RFHHF
Sbjct: 512 HSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTK 571
Query: 467 GKCSCGDYW 475
G CSC D+W
Sbjct: 572 GSCSCRDFW 580
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 81/208 (38%), Gaps = 43/208 (20%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SL SCG L GK++H F D + N L+ MY C ARKVFD++
Sbjct: 81 FPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 137
Query: 191 KRNLSSWHLMISGYA---------------------------ANGQGAD-----GLMLFE 218
+++ SW MI YA NG D L LF
Sbjct: 138 NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFN 197
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVL 275
+M+ +G DK T + AC A++ G +Y E K + + G A++ +
Sbjct: 198 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALG----TALVDMY 253
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A + MP E V W AL
Sbjct: 254 AKCGSIESAMRVFQEMP-EKDVMTWTAL 280
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSSL+ + GNL + +GK++H L + F ++ +++ LI+MY KC N +AR+VF+ ++
Sbjct: 274 FSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ 333
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW MI GYA +G + +LFE+M P+ TFL V AC+ A V G+
Sbjct: 334 SPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWK 393
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M N YG VP +EH A+ LG AG L EA F+ M +PT VW L ++H
Sbjct: 394 YFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVH 453
Query: 311 GDVELEDRAEELLGDLDP----SKAIVD-----------------KIPLPPRKKQSATNM 349
+ L + + + +L+P S I+ + + KK+ A +
Sbjct: 454 KNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSW 513
Query: 350 LEEKNRVSDYRSTDLYRGEYEK-MKGLN---GQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E KN++ + + D Y++ + LN QM GYVP+ VL DI+EE K + L
Sbjct: 514 IEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLC 573
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAI +G+ISTPP +R++KNLR+C DCH A K +SKIV RE++VRD RFH F+
Sbjct: 574 GHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFK 633
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 634 DGNCSCGDFW 643
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L I+ G VH + F DV + + LI+MY C + KVFD
Sbjct: 173 LSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS 232
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ W+ M++GYA NG + L +F +M + G P TF + A + ++ G
Sbjct: 233 DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 108 EGKVREAIE-YMGQDASASAGYDVFSSL---LDSCGNLKSIEMGKRVHEL-LRTSAFVKD 162
+G+ AI ++ AS + V +SL L SC L + +H L +R+ +F
Sbjct: 25 QGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADR 84
Query: 163 VELN---NKLIEMYG----------------KCCNTRLARKVFDQLRKRNLSSWHLMISG 203
N N I++ G + RKVFD++ +R+ SW+ +I G
Sbjct: 85 FTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILG 144
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDK---ETFLVVFAACASAE--------AVKEGF 249
A + + + L + +M + G PD T L +FA CA + A+K GF
Sbjct: 145 CAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGF 201
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 214/381 (56%), Gaps = 26/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
QD SS+L C E+GK+VH L ++F + + LI +Y KC
Sbjct: 203 QDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVV 262
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
KVF++++ RNL W+ M+ A + LFE+M + G P+ TFL + AC
Sbjct: 263 EGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYAC 322
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ A V++G F +MK ++GI PG +HY ++ +LG AG L EA ++ MP +PT V
Sbjct: 323 SHAGLVEKGEHCFGLMK-EHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESV 381
Query: 300 WEALRNFAQIHGDVELE----DRAEELLGD-------LDPSKAIVDKIPLPPR------- 341
W AL +IHG+ EL D+ E+ L + A + R
Sbjct: 382 WGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRD 441
Query: 342 ---KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHD 394
KK++ + +EE NRV + + D G+ YEK++ L +M +AGYV DT +VL +
Sbjct: 442 QGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKE 501
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+D + K + ++YHSERLAIA+GLI+ PP P+R++KNLR+CGDCH AIK +SK GR +I
Sbjct: 502 VDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVII 561
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRDN RFH F DGKC+CGDYW
Sbjct: 562 VRDNNRFHRFEDGKCTCGDYW 582
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
DV + + L++ Y KC + LARKVFD++ +N+ SW MI GY+ G + L LF++
Sbjct: 142 DVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKR 199
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 206/372 (55%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + +D+C L ++ G+ +H + + V VE++ ++ MY KC N A VF +
Sbjct: 63 TFVAAIDACAGLSALVAGRSLHSIAAAAGLVAHVEISTAIVNMYAKCGNLDDATIVFSSI 122
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R +NL SW MI+ + NG L F M G PD TF + +AC+ A + GF
Sbjct: 123 RNKNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFPDAVTFKSILSACSHAGLFEHGF 182
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+++ +D+GI P ++H+ ++ +LG +G L+EAEE V+ MPF P W L ++
Sbjct: 183 FHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLAACRV 242
Query: 310 HGDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATN 348
H VE RA E+L GD + D + +K+ +
Sbjct: 243 HKSVERGKRAAEVLLELTSEIPGYYVLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWS 302
Query: 349 MLEEKNRVSDYRSTDLYRGE-----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E +R ++ + + ++ E++K L+ M+E GYVPDT VL ++E+ KE
Sbjct: 303 TIEINDRFHEFTAGEKFQHPKKQQILEELKRLSVLMKEDGYVPDTTEVLRLVNEDEKESL 362
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L +HSE+LAIA GLISTPP LR++KNLR+C DCH+A K +SKI GR++IVRD RFHH
Sbjct: 363 LFFHSEKLAIACGLISTPPGTTLRVVKNLRVCSDCHSATKFISKITGRKIIVRDLNRFHH 422
Query: 464 FRDGKCSCGDYW 475
+G CSCGDYW
Sbjct: 423 TENGVCSCGDYW 434
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I Y + A+ FD +RN SSW+ MI+GYA NG L LF M G D
Sbjct: 1 MIAAYARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRCD 60
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
TF+ ACA A+ G I G+V +E AI+ + G+L +A
Sbjct: 61 MVTFVAAIDACAGLSALVAGRSLHSIAAA-AGLVAHVEISTAIVNMYAKCGNLDDA 115
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 224/405 (55%), Gaps = 31/405 (7%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAF 159
L +G +E+ + + + YDV + ++++ C +L ++E G ++H L+ F
Sbjct: 684 LAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGF 743
Query: 160 VK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
V V L L++MY KC AR VFD + +N+ SW+ MISGY+ +G + L+L+E
Sbjct: 744 VNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYE 803
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+M K G +P++ TFL + +AC+ V+EG F M+ DY I EHY ++ +LG A
Sbjct: 804 EMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRA 863
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS--------- 329
G L +A+EFVE+MP EP V W AL ++H D+++ A + L +LDP
Sbjct: 864 GRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMS 923
Query: 330 ------------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMK 373
+ I + + KK + +E + + + + + Y ++
Sbjct: 924 NIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLR 983
Query: 374 GLNGQMREAGYVPDTRYVLH---DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIK 430
L Q + GY+PDT ++L DI EE +E+ L HSERLA++ GLIS P + +R+ K
Sbjct: 984 HLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFK 1043
Query: 431 NLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
NLRICGDCH A K +SKI GR +I RD RFHHF +GKCSCGDYW
Sbjct: 1044 NLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD----VFSSLLDSCGNLKSIEMGKRVHE 152
S + L +EGK EA+E + D + G F++LL C N ++ G+++H
Sbjct: 445 SYNALLAGYVQEGKAEEALE-LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 503
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L + K++ + +L+ MY +C A+++F+++ +RN SW+ MI GY NG+ +
Sbjct: 504 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 563
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L LF+QM+ G PD + + ++C S ++G
Sbjct: 564 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 599
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L CG L+S + GK+VH L F D + N LI+MY KC + KVFD++
Sbjct: 278 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 337
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RN +W+ +IS A G D L+LF +M+++G ++ + A A + +G
Sbjct: 338 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKG 396
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-CNTRL--ARKVFD 187
+SSL+ C + S + GK +H + ++ + D L K++ +Y + C L ARK+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
++ +RNL++W+ MI YA + L L+ +MR +G DK TF V AC + E
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M + S +++ S L+ S G L I G+ +H L + D+ L + L++MY KC
Sbjct: 368 MQESGYKSNRFNLGSILMASAG-LADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCG 426
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVF 236
A +VF L +RN S++ +++GY G+ + L L+ M+ + G PD+ TF +
Sbjct: 427 MVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLL 486
Query: 237 AACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP--- 292
CA+ +G ++ +++ + I I ++ + G L A+E RM
Sbjct: 487 TLCANQRNDNQGRQIHAHLIRAN--ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN 544
Query: 293 ----------FEPTVEVWEALRNFAQIH 310
++ E EALR F Q+
Sbjct: 545 AYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ +EA+ Q D FS S+L SC +L + G+ +H + + ++
Sbjct: 557 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L++MY KC + A KV+DQ K+++ ++M+S + +G+ D LF+QM +
Sbjct: 617 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR- 675
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYF-EIMKND 258
+ + + A A+ KE F +F E++++D
Sbjct: 676 ---NTALWNSILAGYANKGLKKESFNHFLEMLESD 707
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 230/406 (56%), Gaps = 28/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELL 154
S + +L + G+V EA+ + S D F+ S++ + L K +H L+
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S K++ + L++MY KC +ARK+FD + R++ +W+ MI GY +G G L
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF++M+K P+ T+L V +AC+ + V EG +F+ MK DYG+ P ++HY A++ +
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--- 331
LG AG + EA +F+E MP P + V+ A +IH ++E+ ++A + L +L+P +
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656
Query: 332 ------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----Y 369
+ + KK +++E +N V + S + Y
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIY 716
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
++ L +++ AGYVPDT +L D++++ +E+ L HSE+LAIA+GL++T P + +
Sbjct: 717 AFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVR 775
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+CGDCHNA K +S + GRE+IVRD +RFHHF++G CSCGDYW
Sbjct: 776 KNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
L+G A+ SL+ L LC+ M D Y+ F+ LL CG+ ++ GK
Sbjct: 119 LKGYAKNSSLETALAFLCR----------MRYDDVKPVVYN-FTYLLKVCGDNADLKRGK 167
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H L T++F +V ++ MY KC A K+FD++ +R+L SW+ +I+G++ NG
Sbjct: 168 EIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNG 227
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L L +M+ G PD T + V A A + G
Sbjct: 228 FAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C +L +E GK VH+ + D+ + N LI MY KC +A +F+ L R
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
SW+ MI GYA NG+ ++ L F +M+ G PD T + V A A
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA 461
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L S + + + G ++A+E + QD ++L + ++ + +GK +H
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ F K V ++ L +MY KC + AR +FD + ++ + SW+ M+ GY NG+
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +FE+M + G P T + ACA ++ G
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 6/176 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL+ C ++K + ++ L+ + + KL+ ++ K + A +VF+ + +
Sbjct: 55 LLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+ +H M+ GYA N L +MR P F + C +K G ++
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ N + + ++ + + +A + +RMP V + F+Q
Sbjct: 172 QLITNSFA--ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 33/427 (7%)
Query: 79 TGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAI----EYMGQDASASAGYDVFSSL 134
+ H P+RG L S + L S G+ E + E +G D A G+ + S +
Sbjct: 169 SAHKVFDEMPVRGR-NLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD-FAPDGFTIVS-V 225
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRN 193
L +C ++ +G+RVH + V++ ++N LI++Y KC + AR++F+++ R
Sbjct: 226 LTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 285
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW +I G AANG G + L LF M + P + T + V AC+ V +GF YF+
Sbjct: 286 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 345
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK DYGI P IEH ++ +LG AG + EA +++ MP EP VW L +H +
Sbjct: 346 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 405
Query: 314 ELEDRAEELLGDLDPSKA--------------------IVDKIPLPPR-KKQSATNMLEE 352
EL A E L +LDP + ++ K + R +K +++E
Sbjct: 406 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 465
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+N V ++ D E YE + + ++R GY+P T VL DI+EE KE AL YHS
Sbjct: 466 RNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHS 525
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
ERLAIA+ L+ + P +P+RIIKNLR+CGDCH A ++SK+ RE+IVRD RFHHF+ G
Sbjct: 526 ERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGA 585
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 586 CSCKDYW 592
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+ L+ +C L ++ G+ +H + FV V + N L+ +YG C A KVFD++
Sbjct: 119 YPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP 178
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R RNL SW+ M++ +AANG+ + L +F +M PD T + V ACA A+ G
Sbjct: 179 VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALG 238
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G+V A+I + G + +A E M TV W +L
Sbjct: 239 -RRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSL 292
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++L+ +C L ++E G+++H D + L++MY KC N AR +F +
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1271
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++SW+ MI G A +G + L FE+M+ G PD+ TF+ V +AC+ + V E +
Sbjct: 1272 NTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAY 1331
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M+ YGI P IEHY ++ L AG + EAE+ + MPFE + ++ L N ++
Sbjct: 1332 ENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRV 1391
Query: 310 HGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQ---SATNMLEE---------- 352
D E R E L L+PS + ++ + + + SA NM+ +
Sbjct: 1392 QVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFS 1451
Query: 353 ----KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
KN+V + + D E Y K++ + ++RE GY+PDT + L D++EE KE +L
Sbjct: 1452 WVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSL 1511
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIAYGL+ TPP LR+IKNLR+CGDCHNAIK +SK+ RE+++RD RFHHF
Sbjct: 1512 YYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHF 1571
Query: 465 RDGKCSCGDYW 475
R G CSCGDYW
Sbjct: 1572 RSGVCSCGDYW 1582
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 5/209 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA++ ++ D F +L L +E+GK++H ++ S + V
Sbjct: 883 QRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVS 942
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI MY K + AR VF Q+ + +L SW+ MISG A +G + +F + + G
Sbjct: 943 VGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGG 1002
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD+ T V AC+S G+V +I V +G + EA
Sbjct: 1003 LLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062
Query: 285 E-EFVERMPFEPTVEVWEALRNFAQIHGD 312
E FV + F+ + W A+ + + GD
Sbjct: 1063 EFLFVNQDGFD--LASWNAMMHGYIVSGD 1089
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q++ A ++ + G L ++ GK++ ++ F D+ + + +++MY KC
Sbjct: 1101 QESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEM 1160
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR++F+++ + +W MISG NGQ L + MR + PD+ TF + AC
Sbjct: 1161 ESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKAC 1220
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTV 297
+ A+++G +I N + + ++ +++ + G++ +A +R +
Sbjct: 1221 SLLTALEQG---RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTN-TSRI 1276
Query: 298 EVWEALRNFAQIHGDVE 314
W A+ HG+ E
Sbjct: 1277 ASWNAMIVGLAQHGNAE 1293
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMI 201
+ +GKR H + TS D L N LI MY KC + ARK+FD R+L +W+ ++
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC--ASAEAVKEGFLYFEIMKNDY 259
S +A + DG LF +R++ + T VF C +++ + E + Y
Sbjct: 702 SAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL-------HGY 752
Query: 260 GIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
+ G++ + A++ + G + EA + M V +W + + + D L
Sbjct: 753 AVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVV-LWNVM---MKAYVDTGL 808
Query: 316 EDRAEELLGDLDPSKAIVDKIPLP--PRKKQSATNMLE 351
E A L + + + D + L R +S N+LE
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE 846
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 132 SSLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C +L + ++H + V D ++ LI++Y K A +F
Sbjct: 1011 ASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQD 1070
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L+SW+ M+ GY +G L L+ M+++G ++ T A +K+G
Sbjct: 1071 GFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQG 1128
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 215/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++E+GK V + K VEL N LI+M+ KC N A K+F Q+ R
Sbjct: 233 SVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSR 292
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW +I+G A +G+G D + LF++M + G PD F+ V +AC+ + V +G YF
Sbjct: 293 TIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYF 352
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ ++ IVP +EHY ++ +L G + EA EFV++MPFEP +W + G+
Sbjct: 353 GSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGE 412
Query: 313 VEL-EDRAEEL--------------------LGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
++L E ++EL L + + + + + KK + M+E
Sbjct: 413 LKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIE 472
Query: 352 EKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + ++ +S D Y+ YE + + ++++AGYVP T VL DIDEE KE AL H
Sbjct: 473 VNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRH 532
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+ L++TPP +RI+KNLR+C DCH+A K +SK+ RE++VRD RFHHF++G
Sbjct: 533 SEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNG 592
Query: 468 KCSCGDYW 475
CSC D+W
Sbjct: 593 LCSCRDFW 600
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC----NTRLARKVF 186
F +L C + S+ +GK VH + F +DV + N LI MY CC A KVF
Sbjct: 128 FPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY--CCLGEDGFEFAEKVF 185
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D K + +W MI+G+ G + + LF +M+ G PD+ T + V +ACA A++
Sbjct: 186 DDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALE 245
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G + E I +E A+I + G++ +A + +M T+ W ++
Sbjct: 246 LG-KWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMD-SRTIVSWTSVIAG 303
Query: 307 AQIHG 311
+HG
Sbjct: 304 LAMHG 308
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 219/364 (60%), Gaps = 25/364 (6%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C L ++ +GK +H + +D+ +++ +I+MY K L++++FD+LR+++++S
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+++I+GY +G+G + L LFE+M + G PD TF + AC+ A V++G YF M
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 539
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE 316
N + I P +EHY ++ +LG AG + +A +E MP +P +W +L + +IHG++ L
Sbjct: 540 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 599
Query: 317 DRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEEKNR 355
++ L +L+P K + ++ +K + + +E +
Sbjct: 600 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 659
Query: 356 VSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERL 411
V ++ D E E+++ L ++ GY PDT VLHD++EE K L+ HSE+L
Sbjct: 660 VHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKL 719
Query: 412 AIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
AI++GL++T +P+R+ KNLRICGDCHNA K +SK+V R+++VRDNKRFHHFRDG CSC
Sbjct: 720 AISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSC 779
Query: 472 GDYW 475
GDYW
Sbjct: 780 GDYW 783
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDAS-----ASAGYDVFSSLLDSCGNLKSIEM 146
N Q SL + LC+ G ++EA++++ +++ ++ + LL +CG K IE+
Sbjct: 65 NRQFSSLH-EIKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEV 123
Query: 147 GKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G+R+HE++ S F D LN ++I MY C + +R VFD+LR++NL W+ ++S Y
Sbjct: 124 GRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYT 183
Query: 206 ANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
N D + +F ++ H PD T V ACA + G + M +V
Sbjct: 184 RNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI-IHGMATKMDLVSD 242
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ A+I + G G + EA + V + TV W AL
Sbjct: 243 VFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNAL 281
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 112 REAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
R+A++ Q + D F+ SLL +C +KS+ G+ +H + D + L
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 351
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ +Y C A+ +FD + R+L SW++MI+GY+ NG + + LF QM G P +
Sbjct: 352 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 411
Query: 230 ETFLVVFAACASAEAVKEG 248
+ V AC+ A++ G
Sbjct: 412 IAIMCVCGACSQLSALRLG 430
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA-RKVFDQLRKR 192
++ +C L + +G+ +H + V DV + N LI MYGKC A ++VFD + +
Sbjct: 214 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTK 273
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+SSW+ ++ GYA N L L+ QM +G PD T + AC+ +++ G
Sbjct: 274 TVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++ SC NL S+E G + H L S V ++N L+ +YGKC + A ++FD++
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS 440
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW ++ GYA G+ + + LFE+M G PD TF+ V +AC+ + V +G
Sbjct: 441 FHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRS 500
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M+ D+ IVP +HY +I + +G L +AEEF+++MP P W L + ++
Sbjct: 501 YFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLR 560
Query: 311 GDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNM 349
GD+E+ A E L LDP SK + + R KK+ +
Sbjct: 561 GDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSW 620
Query: 350 LEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ KN+V +D +S R YEK++ LN +M E GY PD VLHD+ + K L
Sbjct: 621 IKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLS 680
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLI PP MP+RI+KNLR+C DCHNA K +SKI GR+++VRD RFH F
Sbjct: 681 HHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFS 740
Query: 466 DGKCSCGDYW 475
+G CSCGD+W
Sbjct: 741 NGICSCGDFW 750
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 5/222 (2%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G EA++ + + G D F S+L +CG L ++E GK++H + + + +
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDN 311
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V + + L++MY KC + RLA VF ++ +N+ SW MI GY NG G + + +F +M++
Sbjct: 312 VFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQR 371
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
G PD T V ++CA+ +++EG F + G+ P + A++ + G G +
Sbjct: 372 DGIKPDDFTLGSVISSCANLASLEEG-AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Query: 283 EAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRAEELL 323
+A + M F V W AL +AQ E D E++L
Sbjct: 431 DAHRLFDEMSFHDQVS-WTALVMGYAQFGKAKETIDLFEKML 471
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
+V I +G A A G S L+D + I +RV + + K+V + N +
Sbjct: 166 QVHCQILRLGFGAYAFTG----SPLVDMYAKVGPIGDARRVFDEMEG----KNVVMCNTM 217
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
I +C AR +F+ + +R+ +W M++G NG ++ L +F +MR G D+
Sbjct: 218 ITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQ 277
Query: 230 ETFLVVFAACASAEAVKEG 248
TF + AC + A++EG
Sbjct: 278 YTFGSILTACGALAALEEG 296
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 224/371 (60%), Gaps = 27/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SS+L +C + S+E GK VH + S + N LI+MY K + + A+KVF +L
Sbjct: 309 TYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 367
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+++ SW+ +ISGYA +G GA+ L LFEQM K P++ TFL V AC+ + + EG
Sbjct: 368 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 427
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE+MK + I + H++ ++ +LG AG L EA +F+E MP +PT VW AL ++
Sbjct: 428 YYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRM 486
Query: 310 HGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATN 348
H +++L A E + +LDP + + + KK+ A +
Sbjct: 487 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 546
Query: 349 MLEEKNRVSDYRSTD---LYRGEYEKM-KGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N V + + D R E ++M + ++G+++E GYVPDT +VL ++++ +E L
Sbjct: 547 WVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKL 606
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
QYHSE+LA+A+ ++ TPP + +RI KN+RICGDCH+A K S+++GRE+IVRD RFHHF
Sbjct: 607 QYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHF 666
Query: 465 RDGKCSCGDYW 475
G CSC DYW
Sbjct: 667 LHGMCSCRDYW 677
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 70/119 (58%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++S +L+ C L+ ++ G+ +H +++S F D+ L N ++ MY KC + A+ +FD++
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKM 166
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW ++ISGY+ +GQ ++ L LF +M G P++ T + A + + G
Sbjct: 167 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SSLL + G S G+++H + +V + + L++MY + + R A+ +F+ L
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N+ SW+ +I+G+A G+G + LF QM + G P T+ V ACAS+ ++++G
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGK 326
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + I + +I + +G + +A++ R+ + V + +AQ
Sbjct: 327 WVHAHVIKSGGQPIAYIGN--TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ 384
Query: 309 IHG 311
HG
Sbjct: 385 -HG 386
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 212/380 (55%), Gaps = 26/380 (6%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
A A ++S+L +C NL S+ +GK++H + S + +V + L++MY KC + +
Sbjct: 436 AKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKE 495
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A ++F ++ RN SW+ +IS YA NG G L FEQM +G P+ +FL + AC+
Sbjct: 496 ALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSH 555
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
V+EG YF M Y + P EHY +++ +L +G EAE+ + RMPFEP +W
Sbjct: 556 CGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWS 615
Query: 302 ALRNFAQIHGDVELEDRAEELL----------------------GDLDPSKAIVDKIPLP 339
++ N +IH + EL +A + L G+ D + +
Sbjct: 616 SILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRER 675
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDI 395
+K A + +E K + + + D + + K+ L QM E GY PD+ LH++
Sbjct: 676 GIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNV 735
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
DEE K ++L+YHSER+AIA+ LISTP P+ ++KNLR C DCH AIK++SKIV RE+ V
Sbjct: 736 DEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITV 795
Query: 456 RDNKRFHHFRDGKCSCGDYW 475
RD+ RFHHF DG CSC DYW
Sbjct: 796 RDSSRFHHFTDGSCSCKDYW 815
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 8/224 (3%)
Query: 94 QLESLDVNLLSLC--KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKR 149
+++ + N+L C G+V E++E Q F++LL N ++EMG++
Sbjct: 303 EVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQ 362
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H + + +V + N L++MY KC A ++F L ++ W +ISGY G
Sbjct: 363 IHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGL 422
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHY 268
DGL LF +M + D T+ + ACA+ ++ G L+ I+++ G + +
Sbjct: 423 HEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRS--GCLSNVFSG 480
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
A++ + G + EA + + MP +V W AL + +GD
Sbjct: 481 SALVDMYAKCGSIKEALQMFQEMPVRNSVS-WNALISAYAQNGD 523
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+V N +I Y K N AR +FD + +R++ +W ++I GYA + + + LF M
Sbjct: 71 KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKE 247
+ G PD T + + E+V E
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNE 157
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 97 SLDVNLLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+ + L KEG +AI + QD F+++L + + IE G++VH +
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
FV +V + N L++ Y K ARK+F ++ + + S++++I+ A NG+ + L
Sbjct: 267 VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESL 326
Query: 215 MLFEQMRKT 223
LF +++ T
Sbjct: 327 ELFRELQFT 335
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 216/377 (57%), Gaps = 38/377 (10%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNN------KLIEMYGKCCNTRLAR 183
F S++++C S+E GK+ H A+ + LNN L+ +Y K N A
Sbjct: 506 FCSIINACTAPTASVEQGKQFH------AYAIKLRLNNALCVSSSLVTLYAKRGNIESAH 559
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
++F + ++R+L SW+ MISGYA +GQ L +FE+M+K D TF+ V +ACA A
Sbjct: 560 EIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAG 619
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
V +G YF IM ND+ I P +EHY +I + AG L +A + + MPF P VW +
Sbjct: 620 LVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIV 679
Query: 304 RNFAQIHGDVELEDRAEELLGDLDPS--------------------KAIVDKIPLPPR-K 342
+++H ++EL A E + L+P K V K+ R K
Sbjct: 680 LAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVK 739
Query: 343 KQSATNMLEEKNRVSDYRSTDLYR----GEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE 398
K+ + +E KN+ + + DL Y K+ LN ++R+ GY PDT YV HDI++E
Sbjct: 740 KEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDE 799
Query: 399 AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
KE L +HSERLAIA+GLI+T P +PL+I+KNLR+CGDCH+ IK++S + R ++VRD+
Sbjct: 800 QKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDS 859
Query: 459 KRFHHFRDGKCSCGDYW 475
RFHHF+ G CSCGDYW
Sbjct: 860 NRFHHFKGGLCSCGDYW 876
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y S+++ + N ++ +G ++H L+ F + + N LI M K R AR VFD
Sbjct: 203 YYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFD 262
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ ++ SW+ MI+G+ NGQ + F M+ G P TF V +CAS
Sbjct: 263 NMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCAS 316
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S +L C + +G++VH V + + N L++MY K N R R+VFD++
Sbjct: 106 SCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD 165
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ SW+ +++GY+ N LF M+ G PD T V AA A+ AV G
Sbjct: 166 RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG 222
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 8/203 (3%)
Query: 109 GKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EA E Q A A + F+S++ SC +LK + + + +H S + +
Sbjct: 283 GQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVL 342
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
L+ KC A +F + +++ SW MISGY NG + LF MR+ G
Sbjct: 343 TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGV 402
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T+ + AV ++ E++K +Y + A++ G++ +A
Sbjct: 403 KPNHFTYSTILTV---QHAVFISEIHAEVIKTNYEKSSSVG--TALLDAFVKIGNISDAV 457
Query: 286 EFVERMPFEPTVEVWEALRNFAQ 308
+ E + + + L +AQ
Sbjct: 458 KVFELIETKDVIAWSAMLAGYAQ 480
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
E+++T+ + K + L++ + K N A KVF+ + +++ +W M++GYA G+
Sbjct: 427 EVIKTN-YEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETE 485
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ +F Q+ + G P++ TF + AC + A E F + + ++
Sbjct: 486 EAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSL 545
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ + G++ A E +R V + +AQ HG + +A E+ ++
Sbjct: 546 VTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQ-HGQAK---KALEVFEEMQKRNL 601
Query: 332 IVDKIPL 338
VD I
Sbjct: 602 EVDAITF 608
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 208/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSSL+ +C N ++E G ++H + F +D +++ L++MYGKC A + FD++
Sbjct: 247 FSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG 306
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+W+ ++S + +G G D + +FE+M G P+ TF+ + C+ A V+EG
Sbjct: 307 DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 366
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M YG+VPG EHY +I +LG AG L EA+EF+ RMPFEP W + +IH
Sbjct: 367 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 426
Query: 311 GDVELEDRAEELLGDLDP--SKAIV-------------DKIPLPPRKKQSATNMLEEKNR 355
GD E+ A E L L+P S A+V D + R + L +
Sbjct: 427 GDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSW 486
Query: 356 VSDYRSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
V T ++ E YEK+ L Q++ AGYVP T V D+D+ KEK L
Sbjct: 487 VDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLH 546
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSER+A+A+ LIS P P+ + KNLR+C DCH+AIK +SK+ GR++IVRDN RFHHF
Sbjct: 547 RHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFT 606
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 607 DGSCSCGDYW 616
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD-Q 188
V S L +CG LK+ + G+ VH + F D+ + N L +MY K + A VF
Sbjct: 144 VLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGID 203
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ S+ +I GY Q GL +F ++R+ G P++ TF + ACA+ A+++G
Sbjct: 204 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 263
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ ++MK ++ P + ++ + G G L +A + + + +PT W +L +
Sbjct: 264 TQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVF 320
Query: 308 QIHG 311
HG
Sbjct: 321 GQHG 324
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS + +C +L SIEMGK++H L ++ + + L +MY KC A KVF+++
Sbjct: 44 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 103
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW MI GY+ G+ + L+ F++M D+ AC + +A K G
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 161
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RNL SW MISG + N + ++ + F MR G P + F ACAS +++ G
Sbjct: 3 QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG-K 61
Query: 251 YFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +GI G E ++ + + G + +A + E MP + V W A+
Sbjct: 62 QMHCLALKFGI--GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAM 113
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 221/395 (55%), Gaps = 27/395 (6%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
C E VR A M D + S++ SC NL S+E G + H L S ++ + +
Sbjct: 359 CSEEAVR-AFSEMQMDGIKPDDF-TLGSVISSCANLASLEEGAQFHCLALVSGLMRYITV 416
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N L+ +YGKC + A ++FD++ + SW +++GYA G+ + + LFE+M G
Sbjct: 417 SNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGL 476
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD TF+ V +AC+ A V++G YF+ M+ D+ IVP +HY +I + +G EAE
Sbjct: 477 KPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAE 536
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------SKA 331
EF+++MP P W L + ++ G++E+ A E L + DP +K
Sbjct: 537 EFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596
Query: 332 IVDKIPLPPR-------KKQSATNMLEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMR 380
++ R KK+ + ++ KN+V +D +S YEK++ LN +M
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMA 656
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
E GY PD VLHD+ + K + +HSE+LAIA+GLI P MP+RI+KNLR+C DCHN
Sbjct: 657 EEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHN 716
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K +SKI GR+++VRD RFH F DG CSCGD+W
Sbjct: 717 ATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 13/226 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G EA++ + + G D F S+L +CG L + E GK++H + + + +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDN 312
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V + + L++MY KC + RLA VF ++ RN+ SW MI GY N + + F +M+
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSA 278
G PD T V ++CA+ +++EG + + +V G+ YI A++ + G
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCL-----ALVSGLMRYITVSNALVTLYGKC 427
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRAEELL 323
G + +A + M F V W AL +AQ E D E++L
Sbjct: 428 GSIEDAHRLFDEMSFHDQVS-WTALVTGYAQFGKAKETIDLFEKML 472
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S L+D + I +RV + + K V + N LI +C A+ +F +
Sbjct: 183 VGSPLVDMYAKMGLIRDARRVFQEMEA----KTVVMYNTLITGLLRCKMIEDAKGLFQLM 238
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ +W M++G NG + L +F +MR G D+ TF + AC + A +EG
Sbjct: 239 VDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEG 297
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 210/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ + +C L ++E G+++H + + + N +I MY +C AR +F +
Sbjct: 428 FAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP 487
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MI+ +G G + L+EQM K G PD+ TFL V +AC+ A V+EG
Sbjct: 488 FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNR 547
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M +YGI PG +HY +I + AG +A+ ++ MPFE +WEAL + H
Sbjct: 548 YFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTH 607
Query: 311 GDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATNM 349
G+++L A E L L P A + + R KK+ A +
Sbjct: 608 GNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSW 667
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
E +N+V + D E Y ++ LN +M++ GY+PDT+YVLHD++ E KE AL
Sbjct: 668 TEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALS 727
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+GL+ P +R+ KNLRICGDCHNAIK MSK+VGRE++VRD KRFHHF+
Sbjct: 728 THSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFK 787
Query: 466 DGKCSCGDYW 475
+G+CSC +YW
Sbjct: 788 NGECSCRNYW 797
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VKD+ N L+ Y A+ F Q+ ++NL +W +MISG A NG G L LF Q
Sbjct: 356 VKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQ 415
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M+ G P+ F AC+ A++ G
Sbjct: 416 MKLDGYEPNDYAFAGAITACSVLGALENG 444
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI Y + + AR++ D + ++ +W+ MISGY +G D L LF +MR G D
Sbjct: 229 LITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVD 288
Query: 229 KETFLVVFAACA 240
+ T+ V +ACA
Sbjct: 289 ESTYTSVISACA 300
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
DV LI Y N ++AR++F++ L R+ ++ MI+GY+ G + LF
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 220 MRKTGPHPDKETFLVVFAA 238
MR PD TF V +A
Sbjct: 138 MRWANFQPDDFTFASVLSA 156
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 208/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSSL+ +C N ++E G ++H + F +D +++ L++MYGKC A + FD++
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEI 370
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+W+ ++S + +G G D + +FE+M G P+ TF+ + C+ A V+EG
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M YG+VPG EHY +I +LG AG L EA+EF+ RMPFEP W + +I
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 490
Query: 310 HGDVELEDRAEELLGDLDP--SKAIV-------------DKIPLPPRKKQSATNMLEEKN 354
HGD E+ A E L L+P S A+V D + R + L +
Sbjct: 491 HGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 550
Query: 355 RVSDYRSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
V T ++ E YEK+ L Q++ AGYVP T V D+D+ KEK L
Sbjct: 551 WVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLL 610
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSER+A+A+ LIS P P+ + KNLR+C DCH+AIK +SK+ GR++IVRDN RFHHF
Sbjct: 611 HRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHF 670
Query: 465 RDGKCSCGDYW 475
DG CSCGDYW
Sbjct: 671 TDGSCSCGDYW 681
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD-Q 188
V S L +CG LK+ + G+ VH + F D+ + N L +MY K + A VF
Sbjct: 209 VLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGID 268
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ S+ +I GY Q GL +F ++R+ G P++ TF + ACA+ A+++G
Sbjct: 269 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 328
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ ++MK ++ P + ++ + G G L +A + + + +PT W +L +
Sbjct: 329 TQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVF 385
Query: 308 QIHG 311
HG
Sbjct: 386 GQHG 389
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ + ++ + K + GK++H LL + + L N L+ MY KC A K+FD
Sbjct: 6 NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RNL SW MISG + N + ++ + F MR G P + F ACAS +++ G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 249 FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +GI G E ++ + + G + +A + E MP + V W A+
Sbjct: 126 -KQMHCLALKFGI--GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAM 178
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS + +C +L SIEMGK++H L ++ + + L +MY KC A KVF+++
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW MI GY+ G+ + L+ F++M D+ AC + +A K G
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 215/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +LLD+C L ++ G+++H + F D+ ++N L+ YG+C A+ VFD +
Sbjct: 282 TFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGM 341
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+R++ SW MIS +A G+ + + L+ +M G PD F+ V AC+++ V+
Sbjct: 342 RRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASG 401
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F + D + P +EHY ++ VLG AG L +AE+ + MPF P ++ + + ++
Sbjct: 402 DFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKL 461
Query: 310 HGDVELEDRAEELLGDLDPSKA--------IVDKIPLPPR-------------KKQSATN 348
+ DVE + A E++ +LDP + I P KK+ +
Sbjct: 462 YTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCS 521
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +RV ++ + D + Y +++ L QM+EAGY DT+ VL D++E+ KE L
Sbjct: 522 WIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLL 581
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIA+GLISTPP PLRI+KNLR+C DCH A K++SK+ GRE++VRD RFHHF
Sbjct: 582 WYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHF 641
Query: 465 RDGKCSCGDYW 475
++G CSC DYW
Sbjct: 642 QNGMCSCNDYW 652
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
M+G+ AR++FD + R+ SW +M+S YA +G ++ +F++M P +
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRM----PRWSLGS 56
Query: 232 FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ + +A A + +E F+ M+ I + ++ VL + ++ +A+ ++M
Sbjct: 57 WTALLSAFALSGHHEEAKTLFDTMQERDLIA-----WTIMLTVLATFSNIEDAKYHFDQM 111
Query: 292 PFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
P E + W A+ L AE G ++ ++ D+ +P R S T++L
Sbjct: 112 P-ERDLVAWTAM-----------LAANAER--GQMENARETFDQ--MPERNLFSWTSLLS 155
Query: 352 EKNRVSDYRS 361
R D ++
Sbjct: 156 AYGRSGDVKA 165
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L+ YG+ + + A +VFD + + NL +W M++GY+ +G F+ M
Sbjct: 151 TSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSM------ 204
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP--GIEHYIAIIKVLGSAGHLIEA 284
P+++ L+ + A SA A Y + + +P + + ++ L L E+
Sbjct: 205 PERD--LIAWTAMLSAYAFNGHLRY---TREIFQRMPERDLISWATMVAALVENDLLEES 259
Query: 285 EEFVERMP 292
+E +RMP
Sbjct: 260 KELFDRMP 267
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
++ +Y + + A+ VFD++ + +L SW ++S +A +G + LF+ M++ D
Sbjct: 29 MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQER----D 84
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
+ ++ A+ +++ +F+ M + + A++ G + A E
Sbjct: 85 LIAWTIMLTVLATFSNIEDAKYHFDQMPE-----RDLVAWTAMLAANAERGQMENARETF 139
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDR 318
++MP E + W +L + GDV+ R
Sbjct: 140 DQMP-ERNLFSWTSLLSAYGRSGDVKAAGR 168
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 214/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+GK V + K+VEL+N LI+M+ KC + A +F +R+R
Sbjct: 120 SVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRER 179
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW +I G A +G+G + + +FE+M ++G PD F+ + +AC+ + V +G YF
Sbjct: 180 NIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYF 239
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ D+ IVP IEHY ++ +L AG + EA +FV+ MP +P VW L N + HG+
Sbjct: 240 DSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE 299
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
++L ++ L D + I + + + KK + M+E
Sbjct: 300 LKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIE 359
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + ++ + D + YE + + +M+ AGY+P T VL DID+E KE L H
Sbjct: 360 LDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRH 419
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+ L++TPP +RI+KNLR+C DCH+A K +SKI RE++VRD RFHHF++G
Sbjct: 420 SEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNG 479
Query: 468 KCSCGDYW 475
CSC D+W
Sbjct: 480 LCSCRDFW 487
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC------NTRLARKVFD 187
+L +C + ++ +GK VH + F +V + N L+ MY CC ARKVFD
Sbjct: 16 VLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMY--CCCRGGEGGIEFARKVFD 73
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ K + SW MI GY G+ +D + LF +M+ G PD+ T + V +AC A++
Sbjct: 74 EMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALEL 133
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G + E + +E A+I + G + +A M E + W ++
Sbjct: 134 G-KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR-ERNIVSWTSVIGGL 191
Query: 308 QIHG 311
+HG
Sbjct: 192 AMHG 195
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 223/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ GK EA+E Q A + S+L +CGN+ ++ G+ H + +V
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + LI+MY KC L++ VF+ + +NL W+ +++G++ +G+ + + +FE + +T
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD +F + +AC EG+ YF++M +YGI P +EHY ++ +LG AG L EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-------------- 330
+ ++ MPFEP VW AL N ++ +V+L + A E L L+P
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 331 -------AIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQM 379
+I +K+ KK + ++ KNRV + D + EKM ++ +M
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R++G+ P+ + LHD++E+ +E+ L HSE+LA+ +GL++TP PL++IKNLRICGDCH
Sbjct: 665 RKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK +S GRE+ +RD RFHHF+DG CSCGD+W
Sbjct: 725 AVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 49/221 (22%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK---------------- 175
SS+L S G+ + + MG+ +H + +KD + + +I+MYGK
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 176 ----CCN---TRLAR--------KVFDQLRKR----NLSSWHLMISGYAANGQGADGLML 216
CN T L+R ++F+ +++ N+ SW +I+G A NG+ + L L
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG------IVPGIEHYIA 270
F +M+ G P+ T + AC + A+ G ++ +G ++ + A
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHG-------RSTHGFAVRVHLLDNVHVGSA 428
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+I + G + ++ MP + V W +L N +HG
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLV-CWNSLMNGFSMHG 468
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +L C L + ++GK++H + S D + + MY +C ARKVFD++
Sbjct: 118 VLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRM 177
Query: 190 RKR-----------------------------------NLSSWHLMISGYAANGQGADGL 214
+ N+ SW+ ++SG+ +G + +
Sbjct: 178 SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIK 273
++F+++ G PD+ T V + +E + G ++ ++K G++ A+I
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ--GLLKDKCVISAMID 295
Query: 274 VLGSAGHL 281
+ G +GH+
Sbjct: 296 MYGKSGHV 303
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 205/362 (56%), Gaps = 25/362 (6%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
GNL ++ G+++H L+ F + + N ++MYGKC ++ Q R R+ SW+
Sbjct: 573 GNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWN 632
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
++IS A +G F +M G PD TF+ + +AC+ V EG YF M
Sbjct: 633 ILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTK 692
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDR 318
+G+ GIEH + II +LG AG L EAE F+ +MP PT VW +L +IHG++EL +
Sbjct: 693 FGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARK 752
Query: 319 AEELLGDLDPSK----AIVDKIPLPPR-----------------KKQSATNMLEEKNRVS 357
A + L +LD S + + R KK+ A + ++ KN+V+
Sbjct: 753 AADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVT 812
Query: 358 DYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAI 413
+ D Y + Y K++ L +REAGY+PDT Y L D DEE KE L HSER+A+
Sbjct: 813 TFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIAL 872
Query: 414 AYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGD 473
A+GLI++ PLRI KNLR+CGDCH+ K++S+I+GR++I+RD RFHHF GKCSC D
Sbjct: 873 AFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSD 932
Query: 474 YW 475
YW
Sbjct: 933 YW 934
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +++EY Q A Y S+LL CG+ +++ G+ +H ++ S +V +
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ MY + + A VF ++R+R+L SW+ M++ + NG L L +M +T
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLI 282
+ TF +AC + E +K + + + I+ G+ H + A++ + G G +
Sbjct: 360 TNYVTFTTALSACYNLETLK--------IVHAFVILLGLHHNLIIGNALVTMYGKFGSMA 411
Query: 283 EAEEFVERMPFEPTVEVWEAL 303
A+ + MP V W AL
Sbjct: 412 AAQRVCKIMPDRDEV-TWNAL 431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ ++++ SCG L +G +V + S V + N LI M+G C + A VFD
Sbjct: 161 NAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDD 220
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++R+ SW+ +I+ NG L F QMR T D T + C SA+ ++ G
Sbjct: 221 MKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG 280
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
++ G +H + + F + + + LI MY +C + + +FD L +N S+W+ ++S
Sbjct: 477 LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSA 536
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
A G G + L L +MR G H D+ +F V A + + EG
Sbjct: 537 NAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEG 581
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY K + A+ VFD++ +RN +SW+ ++SG+ G + F M + G P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 232 FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ AC + + EG G+ + +++ G+ G + E + + +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 292 PFEPTVEVWEAL 303
EP + W +L
Sbjct: 121 E-EPNIVSWTSL 131
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 125 SAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
+ Y F++ L +C NL+++ K VH + ++ + N L+ MYGK + A++
Sbjct: 359 ATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
V + R+ +W+ +I G+A N + + F +R+ G + T + + +A S +
Sbjct: 416 VCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPD 474
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 17/265 (6%)
Query: 81 HSQNTND--PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSC 138
H+Q+ D P R A +L + + K + +M + + Y V +SL+ +C
Sbjct: 10 HAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY-VAASLVTAC 68
Query: 139 GNLKSIEMGK-RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
+ G +VH + DV + L+ YG VF ++ + N+ SW
Sbjct: 69 DRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSW 128
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKN 257
++ GYA NG + + ++ ++R+ G + ++ V +C + + L ++++ +
Sbjct: 129 TSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCG---VLVDKMLGYQVLGS 185
Query: 258 DYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
I G++ +++ I + G+ + EA + M T+ W ++ + +G
Sbjct: 186 V--IKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTIS-WNSIITASVHNGHC 242
Query: 314 ELEDRAEELLGDLDPSKAIVDKIPL 338
E ++ E + + A D I +
Sbjct: 243 E---KSLEYFSQMRYTHAKTDYITI 264
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 208/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ + +C L ++ G+++H L F + N LI MY KC A +F +
Sbjct: 430 FAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP 489
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MI+ +G GA L LFE M K PD+ TFL V + C+ A V+EG
Sbjct: 490 YLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M YGI PG +HY +I +L AG EA++ +E MP EP +WEAL +IH
Sbjct: 550 YFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIH 609
Query: 311 GDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATNM 349
G+++L +A E L +L P A V + + KK+ +
Sbjct: 610 GNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSW 669
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + D+ E Y ++ L +MR+ GY+PDT++VLHD++ E KE L
Sbjct: 670 IEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLS 729
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ +GL+ P +R+ KNLRICGDCHNA K MSK+V RE++VRD KRFHHF+
Sbjct: 730 THSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFK 789
Query: 466 DGKCSCGDYW 475
+G+CSCG+YW
Sbjct: 790 NGECSCGNYW 799
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 45/286 (15%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHE-LLRTS---AFVKD 162
G EA+E + +D F+ S+L +C N GK+VH +LRT +
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFS 329
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY------------------ 204
+ +NN L +Y KC AR+VF+Q+ ++L SW+ ++SGY
Sbjct: 330 LSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389
Query: 205 -------------AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-L 250
A NG G + L LF +M+ G P F ACA A+ G L
Sbjct: 390 RNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQL 449
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ ++++ G + A+I + G + A MP+ +V W A+ H
Sbjct: 450 HAQLVR--LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS-WNAMIAALGQH 506
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIP-LPPRKKQSATNMLEEKNR 355
G +A EL + + D+I L S ++EE +R
Sbjct: 507 GH---GAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+ D + ++ + +W+ MISGY +G + L +F +M G D+ T+ V +ACA+
Sbjct: 244 ARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACAN 303
Query: 242 AEAVKEGFLYFEIMKNDYGI----VPGIEHYIAIIKVLGS----AGHLIEAEEFVERMPF 293
A GF + Y + P ++ +++ L + G + EA + +MP
Sbjct: 304 A-----GFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPV 358
Query: 294 EPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
+ V W A+ + G V G +D +K+ +++P
Sbjct: 359 KDLVS-WNAI-----LSGYVN--------AGRIDEAKSFFEEMP 388
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVF--DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ LI + N+ LAR++F L R+ ++ MI+GY+ N G + LF
Sbjct: 80 DIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRD 139
Query: 220 MRKTGPHPDKETFLVVFAACA 240
+ + G PD TF V A A
Sbjct: 140 LLRNGFRPDNFTFTSVLGALA 160
>gi|297845892|ref|XP_002890827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336669|gb|EFH67086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 471
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 225/411 (54%), Gaps = 20/411 (4%)
Query: 79 TGHSQNTNDP-LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLL 135
G + T P + N +E+ D SLC +G REA+E + + D+ L
Sbjct: 67 VGQYKTTVSPSVAQNVTIETFD----SLCNQGNWREAVEVLDYLENKGFAMDLIRLLRLA 122
Query: 136 DSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS 195
CG +++E + VHE + DV N +I+MY C + A KVFD++ KRN
Sbjct: 123 KICGEPEALEAARVVHECIIALVSPCDVGSRNAIIKMYSCCGSVDHALKVFDEMPKRNSE 182
Query: 196 SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
+W +M++ + NG G + + LF + ++ G PD E F V + C +KEG L FE M
Sbjct: 183 TWCVMMTCFVNNGFGEEAINLFTRFKEEGNKPDGEIFNQVLSTCTLTGDLKEGSLQFEAM 242
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
+YGI+P +EHY ++ K+ ++GHL EA FVERMP EP+V+VWE L N +++HGDVEL
Sbjct: 243 NREYGIIPSMEHYHSVTKMFATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVEL 302
Query: 316 EDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML--EEKNRVSDY-----RSTDLYRGE 368
DR EL+ LD ++ +DK+ A++ + E NR Y R D +
Sbjct: 303 GDRCAELVEKLDATR--LDKVSSAGLVVTKASDNVKKEPSNRSEPYWCYNFRPVDTSHPQ 360
Query: 369 ----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRM 424
YE + L QM+E GYVPDTR+ I ++ + + E +A+ L+ + PR
Sbjct: 361 MNIIYETLMSLRSQMKEMGYVPDTRFYRTLIMVMGNKEQVFGYREEIAVVESLLKSKPRS 420
Query: 425 PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ +I N+RI GDCHN +K+MS I GR+L RD +R+H F++G C C D W
Sbjct: 421 SITLITNVRIVGDCHNMMKLMSVITGRDLFKRDAQRYHLFKNGVCRCNDRW 471
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 223/399 (55%), Gaps = 30/399 (7%)
Query: 107 KEGKVREAIE---YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G EA+E +M + A F S+L + +L +++ G R+H L DV
Sbjct: 349 QNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDV 408
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ LI++Y KC A +F+++ +R+ W+ +ISG +G GA+ L LF +M++
Sbjct: 409 YVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQE 468
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G PD TF+ + AAC+ A V +G +F++M+ Y IVP +HY + +LG AG L E
Sbjct: 469 GIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDE 528
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------ 331
A F++ MP +P VW AL +IHG+VE+ A + L +LDP
Sbjct: 529 AFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAK 588
Query: 332 -----IVDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGEYE------KMKGLN 376
VD++ R+ K + +E K V+ + S + + +++ L
Sbjct: 589 VGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLL 648
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
++R GYV D +VL D++++ KE L HSERLAIA+G+I+TP R PL I KNLR+CG
Sbjct: 649 AKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCG 708
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCHNA K +S+I RE+IVRD+ RFHHF+DG CSCGD+W
Sbjct: 709 DCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L LC+ + EA+ G+ D SS+L C L + +H
Sbjct: 141 LSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGL 200
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
K++ + N LI++YGK A+ VF + R+L +W+ +ISG GQ A L +F+
Sbjct: 201 DKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQG 260
Query: 220 MRKTGPHPDKETFLVVFAACA-SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
MR +G PD T + + +A A + L+ +M+ + V I AI+ +
Sbjct: 261 MRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD-VDDIIAGNAIVDMYAKL 319
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
++ A+ + MP + +V W L
Sbjct: 320 SNIEAAQRMFDSMPVQDSVS-WNTL 343
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
++R V D+ N +++MY K N A+++FD + ++ SW+ +I+GY NG +
Sbjct: 296 VMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANE 355
Query: 213 GLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ + M+K G + TF+ V A + A+++G + + G+ + +
Sbjct: 356 AVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG-MRMHALSIKIGLNVDVYVGTCL 414
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I + G L EA E+MP T W A+ + +HG
Sbjct: 415 IDLYAKCGKLAEAMLLFEKMPRRSTGP-WNAIISGLGVHG 453
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+R S F + L+ Y + A KVFD++ +R++ +W+ M+SG N + A+
Sbjct: 98 LVRPSVFT-----SGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAE 152
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--- 269
+ LF +M G D T V C V G ++ + Y + G++ +
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMC-----VLLGDQVLALVMHVYAVKHGLDKELFVC 207
Query: 270 -AIIKVLGSAGHLIEAE 285
A+I V G G L EA+
Sbjct: 208 NALIDVYGKLGMLEEAQ 224
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 219/364 (60%), Gaps = 25/364 (6%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C L ++ +GK +H + +D+ +++ +I+MY K L++++FD+LR+++++S
Sbjct: 518 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 577
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+++I+GY +G+G + L LFE+M + G PD TF + AC+ A V++G YF M
Sbjct: 578 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 637
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE 316
N + I P +EHY ++ +LG AG + +A +E MP +P +W +L + +IHG++ L
Sbjct: 638 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 697
Query: 317 DRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEEKNR 355
++ L +L+P K + ++ +K + + +E +
Sbjct: 698 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 757
Query: 356 VSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERL 411
V ++ D E E+++ L ++ GY PDT VLHD++EE K L+ HSE+L
Sbjct: 758 VHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKL 817
Query: 412 AIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
AI++GL++T +P+R+ KNLRICGDCHNA K +SK+V R+++VRDNKRFHHFRDG CSC
Sbjct: 818 AISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSC 877
Query: 472 GDYW 475
GDYW
Sbjct: 878 GDYW 881
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
LL +CG K IE+G+R+HE++ S F D LN ++I MY C + +R VFD+LR++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACASAEAVKEGFLY 251
NL W+ ++S Y N D + +F ++ H PD T V ACA + G +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI- 122
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
M +V + A+I + G G + EA + E MP E + W ++
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSI 173
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 112 REAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
R+A++ Q + D F+ SLL +C +KS+ G+ +H + D + L
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ +Y C A+ +FD + R+L SW++MI+GY+ NG + + LF QM G P +
Sbjct: 450 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 509
Query: 230 ETFLVVFAACASAEAVKEG 248
+ V AC+ A++ G
Sbjct: 510 IAIMCVCGACSQLSALRLG 528
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C L + +G+ +H + V DV + N LI MYGKC A KVF+ + +RN
Sbjct: 107 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERN 166
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMR--KTGPHPDKETFLVVFAACASAEAVKEG 248
L SW+ +I G++ NG + F +M + PD T + V CA E +++G
Sbjct: 167 LVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKG 223
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C + IE G VH L +++ +NN LI+MY KC A+ +FD+ K+
Sbjct: 209 TVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKK 268
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAAC---ASAEAVKE 247
N+ SW+ MI GYA L ++M+ D+ T L V C + +++KE
Sbjct: 269 NIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKE 328
Query: 248 --GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ + ++++ + A I G L +E + M TV W AL
Sbjct: 329 LHGYSWRHGLQSNELVAN------AFIAAYTRCGALCSSERVFDLMD-TKTVSSWNAL 379
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+DA A ++L C ++ K +H + + N I Y +C
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ +VFD + + +SSW+ ++ GYA N L L+ QM +G PD T + AC
Sbjct: 359 CSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Query: 240 ASAEAVKEG 248
+ +++ G
Sbjct: 419 SRMKSLHYG 427
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 220/397 (55%), Gaps = 32/397 (8%)
Query: 109 GKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
GK EA+ MG + G+ + S LL +C L ++ +G+R H + K++
Sbjct: 86 GKPNEALTLYKRMGSEGVEPDGFTMVS-LLSACAELATLVLGRRAHVYMVKVGLNKNLHA 144
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
NN L+++Y KC ARK+FD++ +RN+ SW +I G A NG G + L F+ M + G
Sbjct: 145 NNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREG 204
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P + TF+ V AC+ V EGF YF+ MK Y IVP IEHY ++ +LG AG L EA
Sbjct: 205 LVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEA 264
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP----- 339
++++ MP +P +W L IHG + L A L L+P + D + L
Sbjct: 265 YDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDS-GDYVLLSNLYAS 323
Query: 340 -----------------PRKKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQ 378
+K +++E N V ++ R+ Y+ + + +
Sbjct: 324 EQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAMK 383
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
++ AGYVP T VL DI+EE KE AL YHSE++AIA+ LI+T P P+RIIKNLR+C DC
Sbjct: 384 LKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKNLRVCADC 443
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H AIK++SK+ R+++VRD RFHHFRDG CSC DYW
Sbjct: 444 HFAIKLISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A KVF+ + ++++ +W+ +I+G+A NG+ + L L+++M G PD T + + +ACA
Sbjct: 60 AYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAE 119
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+ G M G+ + A++ + G + EA + + M E V W
Sbjct: 120 LATLVLGRRAHVYMVK-VGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWT 178
Query: 302 AL 303
+L
Sbjct: 179 SL 180
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 220/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+LL +C + ++ +G +H+ + +V +V + +I+MY KC +AR FD ++
Sbjct: 297 LSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMK 356
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW MI+GY +G + L +F QM G P+ TF+ V AAC+ A ++EG+
Sbjct: 357 EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWR 416
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M ++Y + PG+EHY ++ +LG AG++ EA ++ M +W +L +IH
Sbjct: 417 WFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPRK----KQSATNM 349
DVEL + + L LDPS V+++ + + K ++
Sbjct: 477 KDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSL 536
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K RV + D ++EK ++ L+ +++EAGYVP+ VLHD+DEE KE ++
Sbjct: 537 VELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVR 596
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+G++++ P + +IKNLR+CGDCH IK++SKIV RE+IVRD KRFHHF+
Sbjct: 597 VHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFK 656
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 657 DGLCSCGDYW 666
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + SC L + GK+ H+ F D+ +++ LI+MY KC AR +FD++
Sbjct: 85 FPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP 144
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM---------RKTGPHPDKETFLVVFAACA- 240
+RN+ +W +I+GY N + LM+F++ + G D + V +AC+
Sbjct: 145 RRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSR 204
Query: 241 -SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
S +AV EG V G+ + + KV+G L++A
Sbjct: 205 VSNKAVSEG-------------VHGVAIKVGLDKVMGVENTLLDA 236
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 119 GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN 178
G++ S S+L +C + + + + VH + K + + N L++ Y KC
Sbjct: 183 GEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGE 242
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE-TFLVVFA 237
L+RKVFD + ++++ SW+ MI+ YA NG D +F M K G E T +
Sbjct: 243 VSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLL 302
Query: 238 ACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
ACA A++ G L+ +++K Y V + +II + G A + M E
Sbjct: 303 ACAHEGALRVGMCLHDQVIKMGY--VNNVIMATSIIDMYCKCGQAEMARNAFDGMK-EKN 359
Query: 297 VEVWEALRNFAQIHG 311
V W A+ +HG
Sbjct: 360 VRSWTAMIAGYGMHG 374
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
T L K FD + ++ SW+ +I+ A G + L F MRK P++ TF +
Sbjct: 35 TTLFNKYFD---RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKS 91
Query: 239 CASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFE 294
C++ + G + +V G E + A+I + G L A + +P
Sbjct: 92 CSALFDLNSG-----KQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP-R 145
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ W +L I G V+ +D E L+
Sbjct: 146 RNIVTWTSL-----ITGYVQNDDAHEALM 169
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 207/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSSL+ +C N ++E G ++H + F +D +++ L++MYGKC A + FD++
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEI 370
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+W+ ++S + +G G D + FE+M G P+ TF+ + C+ A V+EG
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M YG+VPG EHY +I +LG AG L EA+EF+ RMPFEP W + +I
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 490
Query: 310 HGDVELEDRAEELLGDLDP--SKAIV-------------DKIPLPPRKKQSATNMLEEKN 354
HGD E+ A E L L+P S A+V D + R + L +
Sbjct: 491 HGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 550
Query: 355 RVSDYRSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
V T ++ E YEK+ L Q++ AGYVP T V D+D+ KEK L
Sbjct: 551 WVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLL 610
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSER+A+A+ LIS P P+ + KNLR+C DCH+AIK +SK+ GR++IVRDN RFHHF
Sbjct: 611 HRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHF 670
Query: 465 RDGKCSCGDYW 475
DG CSCGDYW
Sbjct: 671 TDGSCSCGDYW 681
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD-Q 188
V S L +CG LK+ + G+ VH + F D+ + N L +MY K + A VF
Sbjct: 209 VLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGID 268
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ S+ +I GY Q GL +F ++R+ G P++ TF + ACA+ A+++G
Sbjct: 269 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 328
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ ++MK ++ P + ++ + G G L A + + + +PT W +L +
Sbjct: 329 TQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLVSVF 385
Query: 308 QIHG 311
HG
Sbjct: 386 GQHG 389
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ + ++ + K + GK++H LL + + L N L+ MY KC A K+FD
Sbjct: 6 NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RNL SW MISG + N + ++ + F MR G P + F ACAS +++ G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 249 FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +GI G E ++ + + G + +A + E MP + V W A+
Sbjct: 126 -KQMHCLALKFGI--GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAM 178
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS + +C +L SIEMGK++H L ++ + + L +MY KC A KVF+++
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW MI GY+ G+ + L+ F++M D+ AC + +A K G
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 226/391 (57%), Gaps = 29/391 (7%)
Query: 113 EAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EA+E + D A F+SLL ++ +I G+++H + S + + N LI
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
MY +C N A +VF+ + RN+ SW +I+G+A +G L LF +M + G P++
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEV 579
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
T++ V +AC+ V EG+ +F+ M ++G++P +EHY I+ +LG +G L EA +F+
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINS 639
Query: 291 MPFEPTVEVWEALRNFAQIHGDVELEDRAEE--------------LLGDLDPSKAIVDKI 336
MP++ VW ++HG++EL A + LL +L S + D++
Sbjct: 640 MPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEV 699
Query: 337 PLPPRK--------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGY 384
RK K++ + +E +N+V + D + Y++++ L+ ++++ GY
Sbjct: 700 S-NIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
VP+ +VLHD++EE KEK L HSE++A+A+GLIST P+R+ KNLRICGDCH+AIK
Sbjct: 759 VPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKY 818
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+S GRE+IVRD RFHH +DG+CSC +YW
Sbjct: 819 ISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+S L C +S ++G VHE L S D N LI +Y KC A +F +
Sbjct: 69 YSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMG 128
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW M+S +A N G L+ F M + G +P++ F AC++AE V G
Sbjct: 129 SSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGD 188
Query: 250 LYFEI------MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
F +++D + G+ I + G L+ A + E+MP E W +
Sbjct: 189 SIFGFVIKTGYLQSDVCVGCGL-----IDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLM 242
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 126 AGYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---N 178
+GY+ S ++ +C N++ + +G+++H D + LI MY KC +
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGS 324
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD--GLMLFEQMRKTGPHPDKETFLVVF 236
ARK+FDQ+ N+ SW MI+GY G G D L LF M T P+ TF
Sbjct: 325 MCAARKIFDQILDHNVFSWTAMITGYVQKG-GYDEEALDLFRGMILTHVIPNHFTFSSTL 383
Query: 237 AACASAEAVKEG 248
ACA+ A++ G
Sbjct: 384 KACANLAALRIG 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS L +C NL ++ +G++V F + N LI MY + ARK FD L
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ +I YA N + L LF ++ G TF + + AS + +G
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRL-ARKVFDQ 188
F++ +C + + +G + + + +++ DV + LI+M+ K + A KVF++
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN +W LMI+ G + + LF M +G PD+ T V +ACA+ E + G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 218/369 (59%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L CG+L S++ G++VH L S F D+ +++ LI MY KC + ++VFD+ +
Sbjct: 335 SILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSK 394
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +I+GYA +G G L +F +M +G PD+ TF+ V +AC VKEG F
Sbjct: 395 DIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIF 454
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E MK+ Y + EHY ++ +LG AG L EA +E MP E VW AL + + H +
Sbjct: 455 ESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKN 514
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPP---------RKKQSATNM--------LE 351
++L + A + L L+PS A ++ + RK A N+ +E
Sbjct: 515 LDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIE 574
Query: 352 EKNRVSDYRST-DLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
N+V + E+E K++ L +REAGY PD +V+HD+DEE K +L++
Sbjct: 575 VDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRH 634
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE++A+AYGL+ P P+R++KNLR+CGDCH+AIK+++++ GRE+I+RD RFHHF+D
Sbjct: 635 HSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKD 694
Query: 467 GKCSCGDYW 475
G CSC D+W
Sbjct: 695 GLCSCRDFW 703
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ Y K ARKVFD++ +RN+ SW M+ GY G + +LF +M P
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM----PE 137
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ ++ V+ V E F+++ V + +I L S G L EA E
Sbjct: 138 KNVVSWTVMLGGLIEDGRVDEARRLFDMIP-----VKDVVASTNMIGGLCSEGRLSEARE 192
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
+ MP + V W ++ + ++ V++ + E++ D
Sbjct: 193 IFDEMP-QRNVVAWTSMISGYAMNNKVDVARKLFEVMPD 230
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VK V N +I +G AR VFDQ+++++ +W +I Y G + L LF
Sbjct: 261 VKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSL 320
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA--IIKVLG 276
M++ G P+ + + + + C S ++ G ++ +++++ + ++ Y++ +I +
Sbjct: 321 MQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHF----DLDIYVSSVLITMYI 376
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
G L+ + +R + V + +AQ HG ++A E+ ++ S A D+I
Sbjct: 377 KCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQ-HG---FGEKALEVFHEMFSSGAAPDEI 432
Query: 337 PL 338
Sbjct: 433 TF 434
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 28/207 (13%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
S F + I + + AR +FD L+ + ++SW+ +++GY N + A+ L
Sbjct: 10 SYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKL 69
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F++M P + ++ + + + E F+ M + + ++++
Sbjct: 70 FDKM----PERNTISWNGLVSGYVKNGMISEARKVFDKMPER-----NVVSWTSMVRGYV 120
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
G + EAE RMP E V W + + G +E G +D ++ + D I
Sbjct: 121 QEGLIDEAELLFWRMP-EKNVVSWTVM-----LGGLIE--------DGRVDEARRLFDMI 166
Query: 337 PLPPRKKQSATNM---LEEKNRVSDYR 360
P+ + ++TNM L + R+S+ R
Sbjct: 167 PV--KDVVASTNMIGGLCSEGRLSEAR 191
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 223/391 (57%), Gaps = 28/391 (7%)
Query: 112 REAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
+EA+ Q + DV S S+L + G+L ++ +G+RVH+ + ++ L N L
Sbjct: 271 KEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENAL 330
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
I+MY KC R AR VF+Q++ R++ SW +IS Y GQG D + +F +MR +G +PD
Sbjct: 331 IDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDS 390
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
F+ V AAC+ A + +G YF +M + GI P +EH+ ++ +LG AG + EA F+
Sbjct: 391 IAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYGFIR 449
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS-------------------- 329
+MP EP VW L + +++ ++ + A + L L+P
Sbjct: 450 QMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWAD 509
Query: 330 -KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGY 384
AI + KK + +E + V + + D + YE++ L G+M+E GY
Sbjct: 510 VAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGY 569
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
+P+T LHD++EE KE L HSE+LA+A+ +I+T P P+R+ KNLR+CGDCH A K+
Sbjct: 570 MPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKL 629
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+SKI RE+I+RD RFHHF++G CSCGDYW
Sbjct: 630 ISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L + S+ +G ++H + ++ + N LI MYGKC + + A++V D++
Sbjct: 123 YPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIP 182
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA-----V 245
R++ SW+ M+S YA NG+ D L L +M P+ T + A + + V
Sbjct: 183 CRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYV 242
Query: 246 KEGFL 250
KE FL
Sbjct: 243 KEMFL 247
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 17/232 (7%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFD 187
D+ + +LD ++ ++ K++H + +++ + + KL+ +Y C LAR +FD
Sbjct: 22 DLCNRILDQYPDINTL---KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFD 78
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +N+ +++MI Y N D L++++ M G PD T+ V A + ++++
Sbjct: 79 EITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWV 138
Query: 248 GF-LYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
G ++ ++K I + Y+ +I + G L EA++ ++ +P V +
Sbjct: 139 GLQIHGAVLK----IGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVS 194
Query: 305 NFAQ---IHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEK 353
+AQ + +EL E L +L P+ + + LP ++ N+L K
Sbjct: 195 VYAQNGRFNDALELCREMEAL--NLKPNDCTMASL-LPAVTNTTSDNVLYVK 243
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N +++F +L K+++ SW++MI+ Y N + ++L+ QM G PD + + V
Sbjct: 238 NVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLP 297
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
A A+ G + + ++P + A+I + G L +A +M F V
Sbjct: 298 AYGDLSALSLGRRVHKFAERK-KLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVV 356
Query: 298 EVWEAL 303
W ++
Sbjct: 357 S-WTSI 361
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 223/406 (54%), Gaps = 27/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASAS--AGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S + ++ C+ G +A+ + +A + FSS+L +C N SI+ ++H L+
Sbjct: 420 SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLI 479
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S F D + N LI+ Y KC R A KVF+ + + ++ SW+ +ISGYA +G+ D L
Sbjct: 480 EKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDAL 539
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF +M K+ P+ TF+ + + C S V +G F M D+ I P ++HY I+++
Sbjct: 540 ELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRL 599
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE------------- 321
LG AG L +A +F+ +P P+ VW AL + +H +V L + E
Sbjct: 600 LGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTY 659
Query: 322 -LLGDLDPSKAIVDKIPLPPR-------KKQSATNMLEEKNRVSDYR--STDL--YRGEY 369
LL ++ + I+D++ L + KK+ + +E K V + S D R
Sbjct: 660 VLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIIN 719
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
++ LN + GYVPD VLHD+DEE K + L HSERLA+AYGL TPP P+RI+
Sbjct: 720 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 779
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR C DCH K++SKIV RE++VRD RFHHF +G CSCGDYW
Sbjct: 780 KNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S +L +C N+ +++G+++H L+ + ++ + N L+++Y KC N + ++F LR
Sbjct: 355 LSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLR 414
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N SW+ +I GY +G D L +F++MR + TF V ACA+ ++K
Sbjct: 415 DANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQ 474
Query: 251 YFEIMK----NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+++ N+ IV ++I G + +A + E + + V W A+ +
Sbjct: 475 IHSLIEKSTFNNDTIVCN-----SLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISG 528
Query: 307 AQIHG 311
+HG
Sbjct: 529 YALHG 533
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +S+L + L S +GK +H + + + L++MY KC AR VF+ +
Sbjct: 253 VLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEII 312
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ W +IS YA + Q +F +M ++ P++ + V ACA+ + G
Sbjct: 313 PHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLG 371
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++ + + LI+ Y C AR VFD + ++ +W M+S Y+ N D L F +M
Sbjct: 183 RNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKM 242
Query: 221 RKTG--PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
R G P+P T ++ A C S+ + +G ++ +K P + A++ +
Sbjct: 243 RMAGAKPNPFVLTSVLKAAVCLSSAVLGKG-IHGCAVKTLCDTEPHVGG--ALLDMYAKC 299
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G++ +A E +P + + +W L
Sbjct: 300 GYIEDARTVFEIIPHDDVI-LWSFL 323
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 86 NDPLR----GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL 141
N PLR NA L+ LD L SL A+ + A A LL C
Sbjct: 17 NVPLRRNLAANAALQWLDDELASL--------ALPKLDSYACAR--------LLQRCIAR 60
Query: 142 KSIEMGKRVHE--LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
G+ VH + R D N L+ +Y K AR++FD + +RN+ S+
Sbjct: 61 GDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVT 120
Query: 200 MISGYAANGQGADGLMLFEQMRKTG 224
++ GYA G + LF ++++ G
Sbjct: 121 LVQGYALRGGFEEAAGLFRRLQREG 145
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 215/375 (57%), Gaps = 35/375 (9%)
Query: 132 SSLLDSCGNLKSIEMGKRVHE-LLR-----TSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
S +L +C +L +I +GK++H +LR +SA+ + N LI MY KC + AR V
Sbjct: 482 SCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYF----VANCLINMYSKCGDVDTARHV 537
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD + +++ SW M++GY +G+G++ L +F++MRK G PD TFLVV AC+ V
Sbjct: 538 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+G YF+ M DYG+ P EHY I +L G L +A + V+ MP EPT VW AL +
Sbjct: 598 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 657
Query: 306 FAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPP------------------RKK 343
++H +VEL + A L ++ D S ++ I +K+
Sbjct: 658 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 717
Query: 344 QSATNMLEEKNRVSDY---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ + +K S + RS L Y ++ L +++ GYVP+T + LHD+DEE K
Sbjct: 718 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEK 777
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +SKIV E++VRD R
Sbjct: 778 NNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSR 837
Query: 461 FHHFRDGKCSCGDYW 475
FHHF++G CSCG YW
Sbjct: 838 FHHFKNGSCSCGGYW 852
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 11/231 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++L +CG+LK++ K VH +R F+ DV + N LI+ Y KC A KVF+ +
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNMMEF 290
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ SW+ M++GY+ +G LF+ MRK D T+ V A + E
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350
Query: 252 FEIMKNDYGIVPG-IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M I G + + + II VL + L + +E + + +F
Sbjct: 351 FRQM-----IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405
Query: 311 GDVELEDRAEELLG---DLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSD 358
D+ + + ++ +++I D IPL R + T M+ + D
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 456
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFV----------KDVELNNKLIEMYGKCCNTRLA 182
S+L +C +L + G +H + + +D+ + N LI+MY KC + + A
Sbjct: 368 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 427
Query: 183 RKVFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAA 238
R +FD L +RN+ +W +MI G+A G D L LF +M G P+ T + A
Sbjct: 428 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 487
Query: 239 CASAEAVKEG 248
CA A++ G
Sbjct: 488 CAHLAAIRIG 497
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K+G++ AI + A D F+ +L +CG L S G H L+ + F +V
Sbjct: 94 KQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 153
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLS---SWHLMISGYAANGQGADGLMLFEQM- 220
+ N L+ MY +C + A +FD++ +R + SW+ ++S + + L LF +M
Sbjct: 154 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 213
Query: 221 -----RKTGPHPDKETFLVVFAACASAEAVKE 247
+ T D + + + AC S +AV +
Sbjct: 214 LIVHEKPTNERSDIISIVNILPACGSLKAVPQ 245
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 224/369 (60%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L SC L S+++GK +H+ + +F K V++N LI+M+ KC + A +F+++R +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W MI YA +G+ +++FE+MR PD+ TFL + AC+ V+EG YF
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M + +GIVP I+HY +++ +L AG+L +A EF++++P PT +W L H +
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 313 VELEDRAEELLGDLDPSKA-----------------IVDKI--PLPPRK--KQSATNMLE 351
++L ++ E + +LD S VD + + RK K + +E
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 352 EKNRVSDYRSTDLYRGEYEKM-KGLNGQMRE---AGYVPDTRYVLH-DIDEEAKEKALQY 406
N V ++ S D + K+ + L+ ++E +GYVPDT V+H +++++ KE L+Y
Sbjct: 475 VNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRY 534
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI +GL++TPP +R++KNLR+C DCHNA K++S I GR++++RD +RFHHF D
Sbjct: 535 HSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFED 594
Query: 467 GKCSCGDYW 475
GKCSCGD+W
Sbjct: 595 GKCSCGDFW 603
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C K++E G+++H L +V + LI MY +C + AR VFD++
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + ++ MI+GYA + + L LF +M+ P++ T L V ++CA ++ G
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ K + ++ A+I + G L +A E+M ++ T + W A+ H
Sbjct: 252 IHKYAKK-HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-QAWSAMIVAYANH 309
Query: 311 GDVE 314
G E
Sbjct: 310 GKAE 313
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAF-----VKDVELNNKLIEMYGKC---CNTRLARKV 185
L+ C +L+ EL++ A+ ++DV KLI + + AR +
Sbjct: 35 LISKCNSLR---------ELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHL 85
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + + ++ ++ M GY+ + LF ++ + G PD TF + ACA A+A+
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 246 KEG 248
+EG
Sbjct: 146 EEG 148
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 212/371 (57%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ + +CG L +++ GK++H L F N L+ MY +C + AR VF +
Sbjct: 435 YAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP 494
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MIS +G G + L LF+QM G +PD+ +FL + AC A V +GF
Sbjct: 495 NVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ 554
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE M+ D+GI PG +HY +I +LG AG + EA + ++ MPFEPT +WEA+ + +I+
Sbjct: 555 YFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRIN 614
Query: 311 GDVELEDRAEELLGDLDP--------------------SKAIVDKIPLPPR--KKQSATN 348
GD+EL A + L + P A V K+ + R KK+ +
Sbjct: 615 GDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKL-MRDRGVKKEPGCS 673
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E N+V + D + Y ++ + +MR+ GYVPDT++ L D+ KE L
Sbjct: 674 WIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVL 733
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLA+++GL+ P + ++KNL+ICGDCH A+ MS+ VGRE++VRD +RFHHF
Sbjct: 734 FAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHF 793
Query: 465 RDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 794 KDGECSCGNYW 804
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-ELLRTSA-FVKD 162
+ G EA E + S D F+SLL +C N GK VH + +R FV +
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332
Query: 163 VEL--NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL--------------------- 199
L NN L+ +Y K +A K+FD + +++ SW+
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392
Query: 200 ----------MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
M+SGY G D L LF QMR P T+ AAC A+K G
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHG 451
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 36/148 (24%)
Query: 131 FSSLLDSCGNLKSIEMG--KRVHELLRTSAFVKDVELNNKLIEMYGKC---CNTRLARKV 185
F+SLL + G + + + ++H + + ++N LI +Y KC TR ARKV
Sbjct: 162 FTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKV 221
Query: 186 FDQL----------------RKRNLSS---------------WHLMISGYAANGQGADGL 214
D++ RK ++ + W+ MISGY +G A+
Sbjct: 222 LDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAF 281
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASA 242
LF +M PD+ TF + +ACA+A
Sbjct: 282 ELFRRMVSKRIPPDEFTFTSLLSACANA 309
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 217/381 (56%), Gaps = 36/381 (9%)
Query: 127 GYDV----FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
G DV SS++ CG+ +E+GK++H L +++ + + LI +Y KC A
Sbjct: 251 GLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGA 310
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
+VFD++ +NL W+ M+ A + + LF +M G P+ TFL V AC+ A
Sbjct: 311 YRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHA 370
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
V+EG YF +MK Y I PG +HY +++ +LG AG L EA ++ MP EPT VW A
Sbjct: 371 GLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGA 429
Query: 303 LRNFAQIHGDVELEDRAEELLGDL----------------------DPSKAIVDKIPLPP 340
+IHG+ +L A + + +L D +KA + L
Sbjct: 430 FITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKA---RKMLRD 486
Query: 341 R--KKQSATNMLEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHD 394
R KK++ + +EE NRV + + D + + Y+K++ L +M AGYV DT +VL +
Sbjct: 487 RGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLRE 546
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+ E K + ++YHSERLAIA+GLIS P P+RI+KNLR+CGDCHNAIK +SK+ GR +I
Sbjct: 547 VGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVII 606
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRDN RFH F DGKCSC DYW
Sbjct: 607 VRDNNRFHRFEDGKCSCADYW 627
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F S +C L ++GK VH L+ + + DV + + L++MY KC + + AR VFD++
Sbjct: 157 IFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEM 216
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ SW MI GY G+ + + LF++ G + T V C SA ++ G
Sbjct: 217 PHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELG 275
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y LL S +S+ G+++H + S + + LI Y K L+ +VF+
Sbjct: 54 YGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFE 113
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ +++ ++W +IS +A N + + F +M PD F ACA
Sbjct: 114 ESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDV 173
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G ++ ++K Y + + +++ + G + EA + MP V W +
Sbjct: 174 GKSVHCLVIKTGYDVDVFVGS--SLVDMYAKCGDIKEARNVFDEMPHRNVVS-WSGM--- 227
Query: 307 AQIHGDVELEDRAEEL 322
I+G +L + E +
Sbjct: 228 --IYGYTQLGEHEEAM 241
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 217/373 (58%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS+L +C + +E+G+ +H + + + + + L++MYGKC + + FD++
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKE 247
++NL + + +I GYA GQ L LFE+M R GP P+ TF+ + +AC+ A AV+
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F+ M++ YGI PG EHY I+ +LG AG + A EF+++MP +PT+ VW AL+N
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 308 QIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSA 346
++HG +L A E L LDP + + +++ KK +
Sbjct: 492 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 347 TNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ + KN+V +++ D L + + L +M AGY PD + L+D++EE K
Sbjct: 552 YSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAA 611
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+GL+S P +P+RI KNLRICGDCH+ K +S V RE+IVRDN RFH
Sbjct: 612 EVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFH 671
Query: 463 HFRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 672 RFKDGICSCKDYW 684
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
LE+ + + + +G+ REAIE + F + L++C + + +G ++H
Sbjct: 174 LETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHG 233
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+ S F DV + N LI+ YGKC R + +F ++ +N SW +++ Y N +
Sbjct: 234 LVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEK 293
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--- 269
+L+ + RK V +ACA ++ G + + + +E I
Sbjct: 294 ASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI-----HAHAVKACVERTIFVG 348
Query: 270 -AIIKVLGSAGHLIEAEEFVERMP 292
A++ + G G + ++E+ + MP
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMP 372
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL---ARKVF 186
F + +L+ GK++H L + DV + +MY C TRL ARK+F
Sbjct: 110 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY---CKTRLRDDARKLF 166
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
D++ +RNL +W+ IS +G+ + + F + R+ HP+ TF AC+
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
D LL + + S+ +G+ VH +++T L N LI MY K + AR V
Sbjct: 7 DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR 66
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
RN+ SW +ISG A NG + L+ F +MR+ G P+ TF F A AS
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 217/371 (58%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+++L +C +L + GK++H S + V ++N +I +Y + + LAR+VFDQ+
Sbjct: 433 LAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQIC 492
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ +W MI A +G G ++LFE+M + G PD+ T++ VF+AC A + +G
Sbjct: 493 WRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGK 552
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
Y+E M N++GIVP + HY ++ +L AG L EA EF++RMP P VW +L ++
Sbjct: 553 RYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRV 612
Query: 310 HGDVELEDRAEELLGDLDPS-----KAIVDKIPLPPR----------------KKQSATN 348
+ +L + A E L +DP A+ + R KK++ +
Sbjct: 613 RKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFS 672
Query: 349 MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+++V + + D+ + + K + ++++AG+VPD VLHD+D+E KE+ L
Sbjct: 673 WTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELL 732
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GLISTP + LRI+KNLR+C DCH AIK +SK+V RE+IVRD RFHHF
Sbjct: 733 SRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHF 792
Query: 465 RDGKCSCGDYW 475
RDG CSC DYW
Sbjct: 793 RDGYCSCKDYW 803
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 33/143 (23%)
Query: 132 SSLLDSCGNLKSIEMGKRVHE-LLRTS------------------------------AFV 160
+S+L +C NL+ ++MGK++H +LRT A V
Sbjct: 300 TSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVV 359
Query: 161 KDVEL--NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D+ + L+E Y K +T+ AR+VFD + R++ +W MI GY NGQ + + LF
Sbjct: 360 ADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFR 419
Query: 219 QMRKTGPHPDKETFLVVFAACAS 241
M ++GP P+ T V +ACAS
Sbjct: 420 SMIRSGPEPNSHTLAAVLSACAS 442
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 97 SLDVNLLSLCKEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
S V ++ L + G+ +A+ + +G+ + S + +++L SC ++ +G++VH
Sbjct: 130 SWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQF--MLTNVLSSCAATEARGIGRKVHS 187
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ V + N ++ MYGKC + AR VF++++ R+ SSW+ M+S Y G+
Sbjct: 188 FVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDL 247
Query: 213 GLMLFEQM 220
L +FE M
Sbjct: 248 ALSMFENM 255
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ MY K AR VF Q+ +R+ SW +M+ G G+ D + F M G
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 227 PDKETFLVVFAACASAEA--VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P + V ++CA+ EA + F I VP +++ + G G A
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVAN---SVLYMYGKCGDAETA 217
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
ERM W A+ + G ++L
Sbjct: 218 RAVFERMKVRSE-SSWNAMVSLYTHQGRMDL 247
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR----LARK 184
D F+ LL + G+ +H + + L N L+ Y + R AR+
Sbjct: 26 DHFARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARR 85
Query: 185 VFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
+FD + +RN +W+ ++S YA +G+ AD ++F QM P D ++ V+
Sbjct: 86 LFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQM----PERDAVSWTVM 134
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 209/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ + +C L S++ G+++H + + N LI MY +C A VF +
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MI+ A +G G + LFEQM K PD+ TFL + AC A +KEG
Sbjct: 486 YVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M YGI PG +HY +I +L AG ++A+ ++ MPFE +WEAL +IH
Sbjct: 546 YFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIH 605
Query: 311 GDVEL----EDRAEELLGDLDPSKAI-------------VDKIPLPPR----KKQSATNM 349
G++EL DR EL+ D + I V ++ L R KK+ +
Sbjct: 606 GNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSW 665
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N V + D E Y ++ L +M++ GYVPDT++VLHD++ E KE +L
Sbjct: 666 VEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLS 725
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ YG++ P +R+ KNLRICGDCHNA K +SK+V RE++VRD KRFHHF+
Sbjct: 726 THSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFK 785
Query: 466 DGKCSCGDYW 475
+G+CSCG+YW
Sbjct: 786 NGECSCGNYW 795
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 51/225 (22%)
Query: 131 FSSLLDSCGN----LKSIEMGKRVH-ELLRTSA-----FVKDVELNNKLIEMYGKCCNTR 180
++SL+ +CG+ + G++VH +LRT FV V NN LI Y K
Sbjct: 286 YTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSV--NNALITFYTKYDRMI 343
Query: 181 LARKVFD-------------------------------QLRKRNLSSWHLMISGYAANGQ 209
AR+VFD ++ +RN+ +W +MISG A NG
Sbjct: 344 EARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGF 403
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMK--NDYGIVPGIE 266
G +GL LF QM+ G P F AC+ ++ G ++ ++++ +D G+ G
Sbjct: 404 GEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAG-- 461
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + G + AE MP+ +V W A+ HG
Sbjct: 462 --NALITMYSRCGVVESAESVFLTMPYVDSVS-WNAMIAALAQHG 503
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 37/188 (19%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK-------------- 191
+ + VH + TS F + + N+LI +Y K N ARK+FD++ K
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 192 -------------------RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
R+ S++ MI+ Y+ G L LF QM++ G PD TF
Sbjct: 83 SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142
Query: 233 LVVFAACA--SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-- 288
V +A + + E L+ E++K ++P + + + V ++ L+++ + +
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202
Query: 289 ERMPFEPT 296
R F+ T
Sbjct: 203 ARKVFDET 210
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 14/132 (10%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++ D L +W+ MISGY G + F +M G D+ T+ + +AC S
Sbjct: 236 ARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGS 295
Query: 242 AEAVKEGFLYFEIMKNDYG-----IVPGIEHYI-----AIIKVLGSAGHLIEAEEFVERM 291
E F + +G +V H++ A+I +IEA ++M
Sbjct: 296 C---NEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKM 352
Query: 292 PFEPTVEVWEAL 303
P + W A+
Sbjct: 353 PVRDIIS-WNAV 363
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 215/375 (57%), Gaps = 35/375 (9%)
Query: 132 SSLLDSCGNLKSIEMGKRVHE-LLR-----TSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
S +L +C +L +I +GK++H +LR +SA+ + N LI MY KC + AR V
Sbjct: 375 SCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYF----VANCLINMYSKCGDVDTARHV 430
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD + +++ SW M++GY +G+G++ L +F++MRK G PD TFLVV AC+ V
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+G YF+ M DYG+ P EHY I +L G L +A + V+ MP EPT VW AL +
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 550
Query: 306 FAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPP------------------RKK 343
++H +VEL + A L ++ D S ++ I +K+
Sbjct: 551 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 610
Query: 344 QSATNMLEEKNRVSDY---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ + +K S + RS L Y ++ L +++ GYVP+T + LHD+DEE K
Sbjct: 611 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEK 670
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +SKIV E++VRD R
Sbjct: 671 NNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSR 730
Query: 461 FHHFRDGKCSCGDYW 475
FHHF++G CSCG YW
Sbjct: 731 FHHFKNGSCSCGGYW 745
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 11/231 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++L +CG+LK++ K VH +R F+ DV + N LI+ Y KC A KVF+ +
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNMMEF 183
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ SW+ M++GY+ +G LF+ MRK D T+ V A + E
Sbjct: 184 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 243
Query: 252 FEIMKNDYGIVPG-IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M I G + + + II VL + L + +E + + +F
Sbjct: 244 FRQM-----IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298
Query: 311 GDVELEDRAEELLG---DLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSD 358
D+ + + ++ +++I D IPL R + T M+ + D
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 349
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFV----------KDVELNNKLIEMYGKCCNTRLA 182
S+L +C +L + G +H + + +D+ + N LI+MY KC + + A
Sbjct: 261 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 320
Query: 183 RKVFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAA 238
R +FD L +RN+ +W +MI G+A G D L LF +M G P+ T + A
Sbjct: 321 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 380
Query: 239 CASAEAVKEG 248
CA A++ G
Sbjct: 381 CAHLAAIRIG 390
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +CG L S G H L+ + F +V + N L+ MY +C + A +FD++ +R
Sbjct: 16 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 75
Query: 194 LS---SWHLMISGYAANGQGADGLMLFEQM------RKTGPHPDKETFLVVFAACASAEA 244
+ SW+ ++S + + L LF +M + T D + + + AC S +A
Sbjct: 76 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 135
Query: 245 VKE 247
V +
Sbjct: 136 VPQ 138
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 221/399 (55%), Gaps = 27/399 (6%)
Query: 104 SLCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
S + GK EA+E Q SL+ +CGN+ ++ GK +H
Sbjct: 350 SCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFD 409
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + + LI+MY KC +LAR+ FD++ NL SW+ ++ GYA +G+ + + +F M
Sbjct: 410 DVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMML 469
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
++G PD TF V +ACA +EG+ + M ++GI P +EHY ++ +L G L
Sbjct: 470 QSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKL 529
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------------- 328
EA ++ MPFEP VW AL + ++H ++ L + A E L L+P
Sbjct: 530 EEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIY 589
Query: 329 -SKAIVDK-------IPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
SK + D+ + +K + +E ++V + D + EK+ LN
Sbjct: 590 ASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLN 649
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
QM+++GY+P T +VL D++E+ KE+ L HSE+LA+ GL++T P PL++IKNLRIC
Sbjct: 650 MQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICD 709
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH IK++S++ GRE+ VRD RFHHF+DG CSCGD+W
Sbjct: 710 DCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S + SC +L++++ G+++H S F+ D + + L MY KC ARK+FD++
Sbjct: 106 LLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRM 165
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
R++ W MI+GY+ G + LF +MR G P+
Sbjct: 166 PDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPN 204
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S +L + G L+ + +G +VH + D + + +++MYGKC + +VFD++ +
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ S + ++G + NG L +F + + + T+ + A+C+ E
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE---FVERMPFEPTVEVWEALRNFAQ 308
F M+ YG+ P ++I G+ L+ +E F R V V AL +
Sbjct: 364 FRDMQA-YGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYA 422
Query: 309 IHGDVELEDRAEELLGDLD 327
G ++L R + + L+
Sbjct: 423 KCGRIQLARRCFDKMSALN 441
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 223/375 (59%), Gaps = 29/375 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+++++L + ++ ++E G VH + DV + + L++MY KC A + F+ +
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP-DKETFLVVFAACASAEAVKEG 248
RN SW+ MISGYA +GQG + L LFE M+ G P D TF+ V +AC+ A ++EG
Sbjct: 681 PVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE-ALRNFA 307
F +FE M + YG+ P IEH+ + VLG AG L + E+F+E+MP +P V +W L
Sbjct: 741 FKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACC 800
Query: 308 QIHG-DVELEDRAEELLGDLDPSKAI---------------------VDKIPLPPRKKQS 345
+ +G EL +A E+L L+P A+ K+ KK++
Sbjct: 801 RANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEA 860
Query: 346 ATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+ + K+ V + + D + Y+K+K LN +MR+AGYVP T + L+D+++E KE
Sbjct: 861 GYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKE 920
Query: 402 KALQYHSERLAIAYGLIST-PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
+ L YHSE+LA+A+ L + +P+RI+KNLR+CGDCH+A K +SKI GR++I+RD+ R
Sbjct: 921 EILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNR 980
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+DG CSC D+W
Sbjct: 981 FHHFQDGACSCSDFW 995
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H L + KDV L N LI Y + ++ ARKVFD++ RN SW ++SGY+ NG+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF---LYFEIMKNDYGIVPGIEH 267
+ L+ M K G ++ F+ V AC +V F ++ + K Y + + +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 268 YIAII--KVLGSAGHLIEA 284
+ + K +GS G+ + A
Sbjct: 144 VLISMYWKCIGSVGYALCA 162
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 144 IEMGKRVHELLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
++ G+ VH + T+ V V + N L+ MY KC + AR+VF + ++ SW+ MI+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGI 261
G NG + + ++ MR+ P T + ++CAS + K G ++ E +K GI
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK--LGI 446
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+ A++ + G+L E + MP
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 131 FSSLLDSCGNLKSIEM--GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFD 187
F S+L +C + S+ + G+++H L+ ++ D ++N LI MY KC + A F
Sbjct: 105 FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG 164
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF-LVVFAACASAE 243
+ +N SW+ +IS Y+ G +F M+ G P + TF +V AC+ E
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE 221
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISG 203
E+GK++H L + + N LI YGKC K+F ++ +R+ +W+ MISG
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF-----EIMKND 258
Y N A L L M +TG D + V +A AS ++ G +++D
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+V G A++ + G L A F MP + W ++ + HG E
Sbjct: 654 --VVVG----SALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGE 702
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 223/369 (60%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L SC L S+++GK +H+ + +F K V++N LI+M+ KC + A +F+++R +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W MI YA +G+ +++FE+MR PD+ TFL + AC+ V+EG YF
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M + +GIVP I+HY +++ +L AG+L +A EF++++P PT +W L H +
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 313 VELEDRAEELLGDLDPSKA-----------------IVDKI--PLPPRK--KQSATNMLE 351
++L ++ E + +LD S VD + + RK K + +E
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 352 EKNRVSDYRSTDLYRGEYEKM-KGLNGQMRE---AGYVPDTRYVLH-DIDEEAKEKALQY 406
N V ++ S D + K+ + L+ ++E +GYVPDT V+H +++++ KE L+Y
Sbjct: 475 VNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRY 534
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI +GL++TPP +R++KNLR+C DCHNA K++S I GR+++ RD +RFHHF D
Sbjct: 535 HSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFED 594
Query: 467 GKCSCGDYW 475
GKCSCGD+W
Sbjct: 595 GKCSCGDFW 603
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C K++E G+++H L +V + LI MY +C + AR VFD++
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIV 191
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + ++ MI+GYA + + L LF +M+ P++ T L V ++CA ++ G
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ K + ++ A+I + G L +A E+M ++ T + W A+ H
Sbjct: 252 IHKYAKK-HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-QAWSAMIVAYANH 309
Query: 311 GDVE 314
G E
Sbjct: 310 GKAE 313
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAF-----VKDVELNNKLIEMYGKC---CNTRLARKV 185
L+ C +L+ EL++ A+ ++DV KLI + + AR +
Sbjct: 35 LISKCNSLR---------ELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHL 85
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + + ++ ++ M GY+ + LF ++ + G PD TF + ACA A+A+
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 246 KEG 248
+EG
Sbjct: 146 EEG 148
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 217/373 (58%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS+L +C + +E+G+ +H + + + + + L++MYGKC + + FD++
Sbjct: 262 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 321
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKE 247
++NL + + +I GYA GQ L LFE+M R GP P+ TF+ + +AC+ A AV+
Sbjct: 322 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 381
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F+ M++ YGI PG EHY I+ +LG AG + A EF+++MP +PT+ VW AL+N
Sbjct: 382 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 441
Query: 308 QIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSA 346
++HG +L A E L LDP + + +++ KK +
Sbjct: 442 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 501
Query: 347 TNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ + KN+V +++ D L + + L +M AGY PD + L+D++EE K
Sbjct: 502 YSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAA 561
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+GL+S P +P+RI KNLRICGDCH+ K +S V RE+IVRDN RFH
Sbjct: 562 EVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFH 621
Query: 463 HFRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 622 RFKDGICSCKDYW 634
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
LE+ + + + +G+ REAIE + F + L++C + + +G ++H
Sbjct: 124 LETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHG 183
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
L+ S F DV + N LI+ YGKC R + +F ++ +N SW +++ Y N +
Sbjct: 184 LVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEK 243
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--- 269
+L+ + RK V +ACA ++ G + + + +E I
Sbjct: 244 ASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI-----HAHAVKACVERTIFVG 298
Query: 270 -AIIKVLGSAGHLIEAEEFVERMP 292
A++ + G G + ++E+ + MP
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMP 322
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL---ARKVF 186
F + +L+ GK++H L + DV + +MY C TRL ARK+F
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY---CKTRLRDDARKLF 116
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
D++ +RNL +W+ IS +G+ + + F + R+ HP+ TF AC+
Sbjct: 117 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 170
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY K + AR V RN+ SW +ISG A NG + L+ F +MR+ G P+ T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 232 FLVVFAACAS 241
F F A AS
Sbjct: 61 FPCAFKAVAS 70
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V + L +C +L ++E G+ + + V L LI+MY KC + A +VF ++
Sbjct: 270 VLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKM 329
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++N+ +W MI+G A NGQG D L LF QM G P++ TF+ + AC+ ++ V EG
Sbjct: 330 KEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGC 389
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M + YG+ P H+ ++ + G AG L +A+ ++ MPF+P +W AL N +I
Sbjct: 390 SFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRI 449
Query: 310 HGDVELEDRAEELLGDLDPSK--------------AIVDKIPLPPR-------KKQSATN 348
HGD EL ++ + L +LDP+ D++ R K +
Sbjct: 450 HGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCS 509
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ + + ++ + D + Y K+ ++ +++ AGY PDT VL D+DEE KE AL
Sbjct: 510 FIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETAL 569
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIA+GLI T P +RI KNLR+C DCH+A K++SKI RE+IVRD RFHHF
Sbjct: 570 CHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHF 629
Query: 465 RDGKCSCGDYW 475
RDG CSC D+W
Sbjct: 630 RDGSCSCMDFW 640
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F LL +C + S+ +G+ +H + + +V ++N L++MY C A VFD+
Sbjct: 138 TFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRT 197
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ + +SW++MI GY G +FE M P D ++ V+ KEG
Sbjct: 198 PECDGASWNIMIGGYLKCGVFKSARRMFEAM----PDRDVVSWSVMINGYVQESRFKEGL 253
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE------FVERMPFEPTVEVWEAL 303
F+ M + I P ++ L + HL E+ ++ER TV + AL
Sbjct: 254 GLFQDMMGE-KIEPNES---VLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTAL 309
Query: 304 RNFAQIHGDVE 314
+ G VE
Sbjct: 310 IDMYSKCGSVE 320
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 231/413 (55%), Gaps = 38/413 (9%)
Query: 96 ESLDVNLLSLCKEGKVREAIEYMG----QDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
E+LDV + G+ +A+E QD S L +C L ++ +G+++H
Sbjct: 132 ETLDV--FREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIH 189
Query: 152 E-LLRT---SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+LR SAF+ + N LI+MY K + +AR VFD L+++N SW +++GY +
Sbjct: 190 AYILRNHFDSAFLY---VANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMH 246
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G+G + L +F++MR+ G PD T LVV AC+ + + +G +F M ++G++PG EH
Sbjct: 247 GRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEH 306
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL- 326
Y ++ +LG AG L EA E +E M EP+ VW AL + +IH +VEL + A + L +L
Sbjct: 307 YACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELN 366
Query: 327 ---DPSKAIVDKIPLPPR-----------------KKQSATNMLEEKNRVSDYRSTDLYR 366
D S ++ I R +K+ + ++ K + + D
Sbjct: 367 SENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTH 426
Query: 367 GE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
+ YE ++ L +++ GYVP+T + LHD+D+E K L HSE+LA+AYG++ + P
Sbjct: 427 PQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAP 486
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+RI KNLR+CGDCHNAI +S I+ E+I+RD+ RFHHF+ G CSC YW
Sbjct: 487 GAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
DV S ++L +C ++ + GK VH + S +D+ + N L++MY KC A KVF
Sbjct: 12 DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
D+++++++ SW+ M++GY+ G+ D L LFE+MR+ + ++ V AA A
Sbjct: 72 DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFA 125
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 212/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ SC NL S+E G + H S + + ++N L+ +YGKC + + ++F ++
Sbjct: 380 SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYV 439
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW ++SGYA G+ + L LFE M G PDK TF+ V +AC+ A V++G F
Sbjct: 440 DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIF 499
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M ++ I+P +HY +I + AG L EA +F+ +MPF P W +L + + H +
Sbjct: 500 ESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRN 559
Query: 313 VELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSATNM-----------------LE 351
+E+ A E L L+P S ++ I K + N+ ++
Sbjct: 560 MEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIK 619
Query: 352 EKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
KN+V +D +S Y +++ LN +M + GYVPD VLHD+D+ K K L +H
Sbjct: 620 YKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHH 679
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI PP +P+R++KNLR+CGDCHNA K +SKI RE++VRD RFH F+DG
Sbjct: 680 SEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDG 739
Query: 468 KCSCGDYW 475
+CSCGD+W
Sbjct: 740 RCSCGDFW 747
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G REAI+ + + D F S+L +CG + +++ GK+VH + + + ++
Sbjct: 251 QNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIF 310
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + L++MY KC + + A VF ++ +N+ SW M+ GY NG + + +F M+ G
Sbjct: 311 VGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG 370
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD T V ++CA+ +++EG F G++ I A++ + G G + ++
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429
Query: 285 EEFVERMPFEPTVEVWEAL 303
M + V W AL
Sbjct: 430 HRLFSEMSYVDEVS-WTAL 447
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+V + N LI +C +R++F +++++ SW MI+G+ NG + + LF +M
Sbjct: 206 KNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREM 265
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY 259
R D+ TF V AC A++EG ++ I++ DY
Sbjct: 266 RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 305
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
C LK K++H + + ++ L N L+ Y K AR+VFDQ+ +RNL SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 198 HLMISGYA 205
+ ++S Y+
Sbjct: 79 NTLLSSYS 86
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 224/396 (56%), Gaps = 28/396 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G REAI+ + + D S S + +C + S+E + ++E + S + DV
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+++ LI+M+ KC + AR VFD+ R++ W MI GY +G+ + + L+ M + G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
HP+ TFL + AC + V+EG+ +F +M D+ I P +HY +I +LG AGHL +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
E ++ MP +P V VW AL + + H VEL + A + L +DPS
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 332 -IVDKIP-LPPRKKQSATN------MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQM 379
+ D++ + R K+ N +E + R+ +R D YE +++ + ++
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRL 598
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E G+V + LHD+++E E+ L HSER+AIAYGLISTP PLRI KNLR C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCH 658
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K++SK+V RE++VRD RFHHF+DG CSCGDYW
Sbjct: 659 AATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 14/279 (5%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A S F LL +C L ++MG+ VH + F DV + N LI +Y KC
Sbjct: 111 QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 180 RLARKVFD--QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
AR VF+ L +R + SW ++S YA NG+ + L +F MRK PD + V
Sbjct: 171 GSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLN 230
Query: 238 ACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
A + +K+G ++ ++K I P + I++ + G + A+ ++M P
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPN 287
Query: 297 VEVWEAL-RNFAQIHGDVELEDRAEELLG-DLDPSKAIVDKIPLPPRKKQSA-TNMLEEK 353
+ +W A+ +A+ E D E++ D+ P D I + A LE+
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRP-----DTISITSAISACAQVGSLEQA 342
Query: 354 NRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVL 392
+ +Y YR + L + G V R V
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L++ L+ ++ G+ +H + + +L L MY KC A+ +FD+++
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
NL W+ MISGYA NG + + +F +M PD + +ACA ++++ +
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 253 E-IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
E + ++DY I A+I + G +E V + V VW A+ +HG
Sbjct: 347 EYVGRSDYRDDVFISS--ALIDMFAKCGS-VEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL+DS + + K++H L L KLI + AR+VFD L
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ + W+ +I GY+ N D L+++ M+ PD TF + AC+ ++ G F
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 250 LYFEIMK----NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++ + D + G+ A + LGSA + E ER T+ W A+
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER-----TIVSWTAI 193
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 222/399 (55%), Gaps = 28/399 (7%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
+ GK EA+ + S D F+ SLL +C + ++ +GKRVH + ++
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ +N L+++Y +C A+ +FD++ +N SW +I G A NG G + + LF+ M
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 223 T-GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
T G P + TF+ + AC+ VKEGF YF M+ +Y I P IEH+ ++ +L AG +
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------- 331
+A E+++ MP +P V +W L +HGD +L + A + L+P+ +
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 436
Query: 332 -----------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
I ++ KK +++E NRV ++ D + Y K+K +
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 496
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
G++R GYVP V D++EE KE A+ YHSE++AIA+ LISTP R P+ ++KNLR+C
Sbjct: 497 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 556
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH AIK++SK+ RE++VRD RFHHF++G CSC DYW
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIE 145
N +RG A++ + ++ SL +E +V +E + L+ + + +
Sbjct: 89 NTLIRGYAEIGN-SISAFSLYREMRVSGLVE---------PDTHTYPFLIKAVTTMADVR 138
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G+ +H ++ S F + + N L+ +Y C + A KVFD++ +++L +W+ +I+G+A
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
NG+ + L L+ +M G PD T + + +ACA A+ G
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 134 LLDSCGNL------KSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCN---TRLAR 183
+++ C NL SI +++H +R + D EL LI + A
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 184 KVFDQLRKR-NLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACAS 241
KVF ++ K N+ W+ +I GYA G L+ +MR +G PD T+ + A +
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
V+ G ++ ++++ +G + +++ +++ + + G + A + ++MP E + W
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQN--SLLHLYANCGDVASAYKVFDKMP-EKDLVAW 190
Query: 301 EALRN-FAQ 308
++ N FA+
Sbjct: 191 NSVINGFAE 199
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 218/382 (57%), Gaps = 26/382 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + + S+L C +L S++ G++VH L S F DV + + LI MY KC +
Sbjct: 322 QREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDL 381
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR++FD+ +++ W+ +I+GYA +G + L +F +M +G D TF+ V +AC
Sbjct: 382 VKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSAC 441
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ VKEG FE MK+ Y + P EHY ++ +LG AG + +A + +++MP E +
Sbjct: 442 SYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAII 501
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPL 338
W AL + H ++ L + A + L L+P A + + +
Sbjct: 502 WGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRV 561
Query: 339 PPRKKQSATNMLEEKNRVSDYRSTDLYR-----GEYEKMKGLNGQMREAGYVPDTRYVLH 393
K + +E + RV + + + ++ L+G +REAGY PD+ +VLH
Sbjct: 562 KKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLH 621
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
D+DEE K ++L +HSERLA+A+GL+ P MP+R++KNLR+CGDCH+AIK+++KI GRE+
Sbjct: 622 DVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREI 681
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
I+RD RFHHF+DG CSC DYW
Sbjct: 682 ILRDANRFHHFKDGFCSCRDYW 703
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VK V N +I +G+ AR+VFDQ+R+++ +W MI Y G + L LF
Sbjct: 261 VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFAL 320
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA--IIKVLG 276
M++ G + + + V + CAS ++ G ++ E++K+ + + ++A +I +
Sbjct: 321 MQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF----DSDVFVASVLITMYV 376
Query: 277 SAGHLIEAEEFVERMPFEPT-VEVWEALRNFAQIHGDVE 314
G L++A + +R F P + +W ++ HG VE
Sbjct: 377 KCGDLVKARQIFDR--FSPKDIVMWNSIITGYAQHGLVE 413
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLA--RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
VKDV +I G C RLA R++FD++ +RN+ SW MISGY NGQ LF
Sbjct: 168 VKDVVARTNMIS--GYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLF 225
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
E M P ++ ++ + ++E F+ M V + A+I G
Sbjct: 226 EVM----PEKNEVSWTAMLMGYTQGGRIEEASELFDAMP-----VKAVVACNAMILGFGQ 276
Query: 278 AGHLIEAEEFVERM 291
G + +A + +++
Sbjct: 277 NGEVAKARQVFDQI 290
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N I Y + AR+VFD++ + + SW+ M++GY N + + LF++M P
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM----PE 75
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ ++ + + V E F+ M + + A+++ G + EAE
Sbjct: 76 RNTVSWNGLISGYVKNRMVSEARKAFDTMPER-----NVVSWTAMVRGYVQEGLVSEAET 130
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLG--DLDPSKAIVDK 335
+MP E V W + + G +++ R +E G D+ P K +V +
Sbjct: 131 LFWQMP-EKNVVSWTVM-----LGGLIQVR-RIDEARGLFDIMPVKDVVAR 174
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 224/406 (55%), Gaps = 27/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASAS--AGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S + ++ C+ G +A+ + +A + FSS+L +C N SI+ ++H L+
Sbjct: 418 SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLI 477
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S F D + N LI+ Y KC R A KVF+ + + ++ SW+ +IS YA +G+ + L
Sbjct: 478 EKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNAL 537
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF++M K+ + TF+ + + C S V +G F M D+ I P +EHY I+++
Sbjct: 538 ELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRL 597
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------ 328
LG AG L +A +F+ +P P+ VW AL + +H +V L A E + D++P
Sbjct: 598 LGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTY 657
Query: 329 --------SKAIVDKIPLPPR-------KKQSATNMLEEKNRVSDYR--STDL--YRGEY 369
+ I+D++ L + KK++ + +E K V + S D R
Sbjct: 658 VLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIIN 717
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
++ LN + GYVPD VLHD+DEE K + L HSERLA+AYGL TPP P+RI+
Sbjct: 718 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 777
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR C DCH K++SKIV RE+IVRD RFHHF +G CSCGDYW
Sbjct: 778 KNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S +L +C N+ +E+G+++H L + ++ + N L++MY KC N + ++F L+
Sbjct: 353 LSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ 412
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N SW+ +I GY +G D L +F +MR + TF V ACA+ ++K
Sbjct: 413 DANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQ 472
Query: 251 YFEIMK----NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+++ N+ IV ++I G + +A + E + E V W ++ +
Sbjct: 473 IHSLIEKSTFNNDTIVCN-----SLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISA 526
Query: 307 AQIHG----DVELEDR 318
+HG +EL DR
Sbjct: 527 YALHGRATNALELFDR 542
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +S L + L S +GK +H + + + + L++MY KC + A +F+ +
Sbjct: 251 VLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMI 310
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ W +IS YA + Q +F +M ++ P++ + V ACA+ ++ G
Sbjct: 311 PHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG 369
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++ + LI+ Y C AR VFD + ++ +W M+S Y+ N L F +M
Sbjct: 181 RNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKM 240
Query: 221 RKTG--PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
R TG P+P T + A C S+ + +G ++ +K Y P + A++ +
Sbjct: 241 RMTGFKPNPFVLTSALKAAVCLSSALLGKG-IHGCSVKTLYDTEPHVGG--ALLDMYAKC 297
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G + +A E +P + + +W L
Sbjct: 298 GDIEDAHAIFEMIPHDDVI-LWSFL 321
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D N L+ Y K AR++FD + +RN S+ ++ GYA G+ + L LF +++
Sbjct: 81 DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140
Query: 222 KTG 224
+ G
Sbjct: 141 REG 143
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 206/340 (60%), Gaps = 26/340 (7%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV + LI+MY KC +AR +F+ R R++ +W+ MI GY ++G G + LFE+M
Sbjct: 562 QDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ +G P++ TFL V +AC+ A V EG YF MK DYG+ PG+EHY ++ +LG AG
Sbjct: 622 KSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGK 681
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-------- 332
L EA F+++MP EP + V+ A+ ++H +VEL + + + + +L+P + +
Sbjct: 682 LHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANI 741
Query: 333 ---------VDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGL 375
V ++ K K ++++ KN + + S + Y ++ L
Sbjct: 742 YANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKL 801
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
+++ GYVPDT + HD++++ K + L HSE+LAIAYGLI T P ++I KNLR+C
Sbjct: 802 IEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVC 860
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCHNA K++S + GRE+I+RD +RFHHF+DGKCSCGDYW
Sbjct: 861 KDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 57/106 (53%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +CG L ++ G+RVHELL +V + N LI MY KC T LA +VFD+L +
Sbjct: 435 LHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR 494
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
SW+ MI G NG D + LF +M+ PD T + + A A
Sbjct: 495 VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALA 540
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C + +++ + VH F + V ++ ++++Y KC ARKVFD ++ R
Sbjct: 332 SVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDR 391
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N SW+ MI GYA NG + L LF++M G + L AC + EG
Sbjct: 392 NSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVH 451
Query: 253 EIM 255
E++
Sbjct: 452 ELL 454
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+SLL C + G+ VH L + L MY KC AR+VFD++
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMP 287
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
R+ +W+ +++GYA NG + M+ + G PD T + V ACA A+A+
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQAL 343
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 225/390 (57%), Gaps = 27/390 (6%)
Query: 113 EAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EA+E + D A F+SLL ++ +I G+++H + S + + N LI
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
MY +C N A +VF+ + RN+ SW +I+G+A +G L LF +M + G P+
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLV 579
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
T++ V +AC+ V EG+ +F+ M ++G++P +EHY ++ +LG +G L EA +F+
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINS 639
Query: 291 MPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSA 346
MP++ VW ++HG++EL A +++ + +P + ++ + K
Sbjct: 640 MPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEV 699
Query: 347 TNM---LEEKNRVSDYRST---------DLYRGE---------YEKMKGLNGQMREAGYV 385
+N+ ++EKN + + + Y G+ Y++++ L+ ++++ GYV
Sbjct: 700 SNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYV 759
Query: 386 PDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIM 445
P+ +VLHD++EE KEK L HSE++A+A+GLIST P+R+ KNLRICGDCH+AIK +
Sbjct: 760 PNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYI 819
Query: 446 SKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
S GRE+IVRD RFHH +DG+CSC +YW
Sbjct: 820 SMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+S L C +S ++G VHE L S D N LI +Y KC A +F +
Sbjct: 69 YSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMG 128
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW M+S +A N G L+ F M + G +P++ F AC++AE V G
Sbjct: 129 SSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGD 188
Query: 250 LYFEI------MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
F +++D + G+ I + G L+ A + E+MP E W +
Sbjct: 189 SIFGFVVKTGYLQSDVCVGCGL-----IDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLM 242
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 126 AGYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---N 178
+GY+ S ++ +C N++ + +G+++H D + LI MY KC +
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGS 324
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD--GLMLFEQMRKTGPHPDKETFLVVF 236
ARK+FDQ+ N+ SW MI+GY G G D L LF M T P+ TF
Sbjct: 325 MCAARKIFDQILDHNVFSWTAMITGYVQKG-GYDEEALDLFRGMILTHVIPNHFTFSSTL 383
Query: 237 AACASAEAVKEG 248
ACA+ A++ G
Sbjct: 384 KACANLAALRIG 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS L +C NL ++ +G++V F + N LI MY + ARK FD L
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ +I YA N + L LF ++ G TF + + AS + +G
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRL-ARKVFDQ 188
F++ +C + + +G + + + +++ DV + LI+M+ K + A KVF++
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN +W LMI+ G + + LF +M +G PD+ T V +ACA+ E + G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 217/373 (58%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS+L +C + +E+G+ +H + +++ + + L++MYGKC + + FD++
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKE 247
++NL + + +I GYA GQ L LFE M R GP P+ TF+ + +AC+ A AV+
Sbjct: 372 PEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVEN 431
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F+ MK+ YGI PG EHY I+ +LG AG + +A EF+++MP +PT+ VW AL+N
Sbjct: 432 GMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNAC 491
Query: 308 QIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSA 346
++HG L A E L LDP + + +++ KK +
Sbjct: 492 RMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAG 551
Query: 347 TNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ + KN+V +++ D + + + L +M AGY PD + L+D++EE K
Sbjct: 552 YSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAA 611
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+GL++ P +P+RI KNLRICGDCH+ K +S V RE+IVRDN RFH
Sbjct: 612 EVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFH 671
Query: 463 HFRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 672 RFKDGICSCKDYW 684
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 25/245 (10%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYM-------GQDASASAGYDVFSSLLDSCGNLKSIEMG 147
LE+ + + + +G+ +EAIE GQ S + F L++C + +++G
Sbjct: 174 LETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSIT-----FCGFLNACSDGLLLDLG 228
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
++H L+ S F DV + N LI+ YGKC R + +F ++ +N SW +++ Y N
Sbjct: 229 MQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQN 288
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
+ +L+ + RK V +ACA ++ G + + + +E
Sbjct: 289 HEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSI-----HAHAVKACVER 343
Query: 268 YI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
I A++ + G G + ++E+ + MP + V + + +A G V D A L
Sbjct: 344 NIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAH-QGQV---DMALALF 399
Query: 324 GDLDP 328
D+ P
Sbjct: 400 EDMAP 404
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL---ARKVF 186
F + + +L+ GK++H L + DV + +MY C TRL ARK+F
Sbjct: 110 TFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY---CKTRLRDDARKLF 166
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D++ +RNL +W+ IS +G+ + + F + R+ G P+ TF AC+ +
Sbjct: 167 DEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLD 226
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G ++ G + Y +I G + +E M + V + +
Sbjct: 227 LGMQMHGLVFRS-GFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAY 285
Query: 307 AQIHGD 312
Q H D
Sbjct: 286 VQNHED 291
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
D LL + + S+ +G+ VH +++T L N LI MY K + AR V
Sbjct: 7 DALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR 66
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
RN+ SW ++SG A NG + L F +MR+ G P+ TF VF A AS
Sbjct: 67 LTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVAS 120
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 218/392 (55%), Gaps = 26/392 (6%)
Query: 110 KVREAIEYMGQDASASAGYDV-FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
K E + M +A S V ++L +C L ++E GK +H + + + N
Sbjct: 267 KALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNA 326
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI MYG+C + ++VFD ++KR++ SW+ +IS Y +G G + +FE M G P
Sbjct: 327 LITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPS 386
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
+F+ V AC+ A V+EG + FE M + Y I PG+EHY ++ +LG A L EA + +
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLI 446
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------------- 328
E M FEP VW +L +IH +VEL +RA +L +L+P
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWS 506
Query: 329 -SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAG 383
+K+++ + +K + +E K +V + S D + + E++ L+ +M+ G
Sbjct: 507 EAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQG 566
Query: 384 YVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIK 443
YVP T VL+D+DEE KE+ + HSE+LA+A+GLI+T +RI KNLR+C DCH K
Sbjct: 567 YVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTK 626
Query: 444 IMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+SK RE++VRD RFHHFRDG CSCGDYW
Sbjct: 627 FISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLCK G +++A+ + + + + F L+ SC S+ G VH L S F +D
Sbjct: 56 SLCKGGNLKQALHLLCCEPNPTQ--QTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDP 113
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI MY + + A KVFD+ R+R + W+ + A G G + L L+ QM
Sbjct: 114 FLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWI 173
Query: 224 GPHPDKETFLVVFAACASAE 243
G D+ T+ V AC +E
Sbjct: 174 GTPSDRFTYTYVLKACVVSE 193
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H + + ++ + L+++Y K + A VF + +N SW MI+ +A
Sbjct: 202 GKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAK 261
Query: 207 NGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY-GIV 262
N L LF+ M P+ T + + ACA A+++G ++ I++ I+
Sbjct: 262 NEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSIL 321
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
P + A+I + G G ++ + + M V W +L + +HG
Sbjct: 322 PVLN---ALITMYGRCGEVLMGQRVFDNMKKRDVVS-WNSLISIYGMHG 366
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 218/371 (58%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ + LL CG+L + ++G+++H + ++ + N LI MY KC +R++FD +
Sbjct: 553 ILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC-GCADSRRIFDLM 611
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ +W+ +I+GYA +G G + + +++ M G P++ TF+ + AC+ A V EG+
Sbjct: 612 EERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGW 671
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+ M DYG+ P EHY ++ +LG G + AE+F+ MP EP +W AL +I
Sbjct: 672 KFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKI 731
Query: 310 HGDVELEDRAEELLGDLDPSKA--------IVDKIPL-----PPRKKQSATNMLEE---- 352
H + E+ RA E L ++PS A I + + RK +++E
Sbjct: 732 HKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791
Query: 353 ----KNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
K+++ + + D + E+ ++ L ++ GYVPDT +VLHDIDEE KE +L
Sbjct: 792 WTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSL 851
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+AY L++TP MP++I+KNLRICGDCH IK +S + R++ +RD RFHHF
Sbjct: 852 LYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHF 911
Query: 465 RDGKCSCGDYW 475
R+G CSC D+W
Sbjct: 912 RNGSCSCEDFW 922
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+ +C N+ ++E G +VH L + N LI MYGKC N AR+VF ++
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMV 481
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ ++ N + F+ M D ++ + +A A AE E
Sbjct: 482 TKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMG 537
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
F+ M ++ + P ++ V GS G
Sbjct: 538 AFKTMFCEHEL-PNSPILTILLGVCGSLG 565
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI Y + A+++FD++ RN SW MI+GYA NG+ + L L +++ ++G
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P + +F AC++ A++ G
Sbjct: 417 PSLSSLTSIFFACSNIVALETG 438
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
DA + + LL G L + +RV + ++ N +I Y + +
Sbjct: 89 DAISGGNMRTGAILLSGYGRLGRVLEARRVFD----GMLERNTVAWNAMISCYVQNGDIT 144
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+AR++FD + R++SSW+ M++GY + Q D LFE+M P + ++ V+ +
Sbjct: 145 MARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKM----PERNLVSWTVMISGYG 200
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHY---IAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
E + + F M + G++P ++ ++ +K LG+ L + FE V
Sbjct: 201 RIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDV 259
Query: 298 EVWEALRN 305
+ A+ N
Sbjct: 260 VIGTAILN 267
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQL 189
F+S L + L ++++ + + L + F +DV + ++ +Y + + A K F+ +
Sbjct: 227 FASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN +W MI+ + G+ + ++E+ P + A + +
Sbjct: 287 IERNEYTWSTMIAALSHGGRIDAAIAVYER----DPVKSIACRTALITGLAQCGRIDDAR 342
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ FE + P + + A+I G + EA+E ++MPF T+ + +AQ
Sbjct: 343 ILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ- 396
Query: 310 HGDVELEDRAEELLGDL 326
R+EE LG L
Sbjct: 397 ------NGRSEEALGLL 407
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 218/371 (58%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ + LL CG+L + ++G+++H + ++ + N LI MY KC +R++FD +
Sbjct: 553 ILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC-GCADSRRIFDLM 611
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ +W+ +I+GYA +G G + + +++ M G P++ TF+ + AC+ A V EG+
Sbjct: 612 EERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGW 671
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+ M DYG+ P EHY ++ +LG G + AE+F+ MP EP +W AL +I
Sbjct: 672 KFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKI 731
Query: 310 HGDVELEDRAEELLGDLDPSKA--------IVDKIPL-----PPRKKQSATNMLEE---- 352
H + E+ RA E L ++PS A I + + RK +++E
Sbjct: 732 HKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791
Query: 353 ----KNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
K+++ + + D + E+ ++ L ++ GYVPDT +VLHDIDEE KE +L
Sbjct: 792 WTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSL 851
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+AY L++TP MP++I+KNLRICGDCH IK +S + R++ +RD RFHHF
Sbjct: 852 LYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHF 911
Query: 465 RDGKCSCGDYW 475
R+G CSC D+W
Sbjct: 912 RNGSCSCEDFW 922
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+ +C N+ ++E G +VH L + N LI MYGKC N AR+VF ++
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMV 481
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ ++ N + F+ M D ++ + +A A AE E
Sbjct: 482 TKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMG 537
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
F+ M ++ + P ++ V GS G
Sbjct: 538 AFKTMFCEHEL-PNSPILTILLGVCGSLG 565
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI Y + A+++FD++ RN SW MI+GYA NG+ + L L +++ ++G
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P + +F AC++ A++ G
Sbjct: 417 PSLSSLTSIFFACSNIVALETG 438
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
DA + + LL G L + +RV + ++ N +I Y + +
Sbjct: 89 DAISGGNMRTGAILLSGYGRLGRVLEARRVFD----GMLERNTVAWNAMISCYVQNGDIT 144
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+AR++FD + R++SSW+ M++GY + Q D LFE+M P + ++ V+ +
Sbjct: 145 MARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKM----PERNLVSWTVMISGYG 200
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHY---IAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
E + + F M + G++P ++ ++ +K LG+ L + FE V
Sbjct: 201 RIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDV 259
Query: 298 EVWEALRN 305
+ A+ N
Sbjct: 260 VIGTAILN 267
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQL 189
F+S L + L ++++ + + L + F +DV + ++ +Y + + A K F+ +
Sbjct: 227 FASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN +W MI+ + G+ + ++E+ P + A + +
Sbjct: 287 IERNEYTWSTMIAALSHGGRIDAAIAVYER----DPVKSIACRTALITGLAQCGRIDDAR 342
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ FE + P + + A+I G + EA+E ++MPF T+ + +AQ
Sbjct: 343 ILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ- 396
Query: 310 HGDVELEDRAEELLGDL 326
R+EE LG L
Sbjct: 397 ------NGRSEEALGLL 407
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 225/412 (54%), Gaps = 28/412 (6%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
N + S + + + G EAIE M ++ +A + S+L +C ++ G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H L + DV + L +MYGKC A +F Q+ + N W+ +I+ + +G
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
G +MLF++M G PD TF+ + +AC+ + V EG FE+M+ DYGI P ++HY
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
++ + G AG L A +F++ M +P +W AL + ++HG+V+L A E L +++P
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Query: 329 SKAI-----------------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTD---- 363
VD+I +K + +E N+V + + +
Sbjct: 652 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHP 711
Query: 364 LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPR 423
+Y Y ++ L +++ GYVPD R+VL D++++ KE L HSERLAIA+ LI+TP +
Sbjct: 712 MYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAK 771
Query: 424 MPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+RI KNLR+CGDCH+ K +SKI RE+IVRD+ RFHHF++G CSCGDYW
Sbjct: 772 TTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 106 CKEGKVREAIEYMGQ-----DASASAGYDVFS------------SLLDSCGNLKSIEMGK 148
CK G+ ++ +G ASA+A D + +L C NL+S K
Sbjct: 15 CKGGRFTRVLQSIGSVIREFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQS---AK 71
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H L S +++V ++ KL+ +Y N LAR FD ++ R++ +W+LMISGY G
Sbjct: 72 CLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAG 131
Query: 209 QGADGLMLFEQ-MRKTGPHPDKETFLVVFAACAS--------AEAVKEGFLYFEIMKNDY 259
++ + F M +G PD TF V AC + A+K GF++ D
Sbjct: 132 NSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW------DV 185
Query: 260 GIVPGIEHYIAIIKVLGSA 278
+ + H + K +G+A
Sbjct: 186 YVAASLIHLYSRYKAVGNA 204
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
LR F++D+ + N ++ MY K AR VF+ L ++ SW+ +ISGYA NG ++
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 214 LMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAI 271
+ ++ M + G ++ T++ V AC+ A A+++G L+ ++KN G+ + ++
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSL 492
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G G L +A ++P +V W L HG E
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGE 534
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y F S+L +C +++ G ++H L F+ DV + LI +Y + AR +FD
Sbjct: 153 YRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ R++ SW+ MISGY +G + L L +R D T + + +AC A
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNR 265
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERM 291
G + + Y I G+E + + I + G L + ++ +RM
Sbjct: 266 G-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
P+R + S + + C+ G +EA+ + A V S LL +C G
Sbjct: 212 PVR---DMGSWNAMISGYCQSGNAKEALT-LSNGLRAMDSVTVVS-LLSACTEAGDFNRG 266
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+H ++ ++NKLI++Y + R +KVFD++ R+L SW+ +I Y N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFL 233
Q + LF++MR + PD T +
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLI 352
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 224/394 (56%), Gaps = 28/394 (7%)
Query: 108 EGKVREAIEYMGQDASASAGYDVFSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELN 166
EG VR ++ M ++ Y FS ++++C +E GK++H S F + ++
Sbjct: 89 EGAVRIFVQ-MAKEKIKPNEY-TFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVS 146
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
+ L+ MY K + A +VF + R+R+L SW+ +ISGYA +G G L +FE+M++
Sbjct: 147 SALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLE 206
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
D TF+ V +AC EG YF+IM D+ I P +EHY ++ + G AG L++A E
Sbjct: 207 MDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAME 266
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----------------- 329
+ MPF + VW L + IH ++E+ A + L L P
Sbjct: 267 IINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGN 326
Query: 330 ---KAIVDKIPLPPR-KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMRE 381
+A V K+ + KK + + +E KN+ + + D L Y K++ L+ Q++
Sbjct: 327 WKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKG 386
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGY PDT YV D+DEE KE L HSERLAIA+GLI TPP PL+I+KNLR+CGDCH+
Sbjct: 387 AGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSV 446
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++S + GR+++VRD+ RFHHF+ G CSCGDYW
Sbjct: 447 IKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S++L + + EM H +VK + L++ Y K N A KVF ++
Sbjct: 12 TYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRI 67
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA-VKEG 248
++++ +W MI GYA G + +F QM K P++ TF + ACA+ A V++G
Sbjct: 68 EEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQG 127
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 219/398 (55%), Gaps = 27/398 (6%)
Query: 105 LCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
+ G EA++ Q A A F S + + N +I+ GK++H ++ + + +
Sbjct: 592 FAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSE 651
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
E +N LI +Y KC + A++ F ++ ++N+ SW+ MI+GY+ +G G++ + LFE+M++
Sbjct: 652 TEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQ 711
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
G P+ TF+ V +AC+ V EG YF M ++G+VP EHY+ ++ +LG A L
Sbjct: 712 LGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLC 771
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-----------A 331
A EF+E MP EP +W L + +H ++E+ + A L +L+P A
Sbjct: 772 CAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 831
Query: 332 IVDKIPLPPR----------KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNG 377
+ K R KK+ + +E KN + + D L YE + LN
Sbjct: 832 VSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNE 891
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+ E GYV D +L+D+++E K+ HSE+LA+A+GL+S MP+R+IKNLR+C D
Sbjct: 892 RAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCND 951
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CHN IK +SKI R ++VRD RFHHF G CSC DYW
Sbjct: 952 CHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS + +C ++++ G+++H S + +D+ + N L+ +Y +C + A F+++
Sbjct: 519 FSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID 578
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW+ +ISG+A +G + L +F QM + G + TF +A A+ +K+G
Sbjct: 579 AKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ 638
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE-EFVERMPFEPTVEVWEALRNFAQI 309
+M G E +I + G + +A+ EF E MP E V W A+
Sbjct: 639 IHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFFE-MP-EKNVVSWNAMITGYSQ 695
Query: 310 HG 311
HG
Sbjct: 696 HG 697
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L +C +L ++++G+++H + S F +V + + LI+MY K AR + +LR
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ ++ SW MI+GY + A+ L LF++M G D F +ACA +A+ +G
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 131 FSSLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L +C K+ ++ +++H + F + N LI++Y K + LA+ VF++L
Sbjct: 114 FASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL 173
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
++ SW MISG + NG+ + ++LF QM K+ P F V +AC E K G
Sbjct: 174 FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGE 233
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
L+ I+K +G+ A++ + G+LI AE+ +M
Sbjct: 234 QLHGFIVK--WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFSS+L +C ++ ++G+++H + + + N L+ +Y + N A ++F ++
Sbjct: 215 VFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+ S++ +ISG A G L LFE+M+ PD T + +ACAS A +G
Sbjct: 275 HRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG 333
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + L + C N S+ K++H + S F + L ++LI++Y A K+
Sbjct: 8 ANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKL 67
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA- 244
FD + N+S W+ +ISG A + L LF M PD+ TF V AC+ +A
Sbjct: 68 FDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAP 127
Query: 245 --VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
V E ++ +I+ + +G P + + +I + GH+ A+ ER+ + +V W A
Sbjct: 128 FQVTEQ-IHAKIIHHGFGSSPLVCN--PLIDLYSKNGHVDLAKLVFERLFLKDSVS-WVA 183
Query: 303 LRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
+ + +G ED A L + S IP P
Sbjct: 184 MISGLSQNGR---EDEAILLFCQMHKSAV----IPTP 213
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C ++ + GK++H + D+ + L+++Y KC + A + F
Sbjct: 318 ASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTET 377
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
N+ W++M+ Y G ++ +F QM+ G P++ T+ + C S A+ G +
Sbjct: 378 ENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQI 437
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +++K+ G + +I + G L A ++R+ E V W A+
Sbjct: 438 HTQVIKS--GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAM 487
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 221/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L +C + +I+ GK +H + ++V + +++MY KC +A + F +++
Sbjct: 159 LSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 218
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW MI+GY +G+G + L +F +M+++G P+ TF+ V AAC+ A + EG
Sbjct: 219 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 278
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ MK ++GI G+EHY ++ +LG AG L EA ++ M +P +W AL + +IH
Sbjct: 279 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 338
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATNM 349
+VEL + + + L +LD S + V++I L + +K +
Sbjct: 339 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSS 398
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
E K ++ + D + Y ++ L +M+EAGYVP+T VLHD+DEE KE AL+
Sbjct: 399 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 458
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+ L+++ PR + IIKNLR+C DCH A+K ++KI RE+I+RD +RFHHF+
Sbjct: 459 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 518
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 519 DGLCSCRDYW 528
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 132 SSLLDSCGNLKSIEMGKRV---------HELLRTSAFVKDVELNNKLIEMYGKCCNTRL- 181
+S++D L + RV H L+ F ++ + N +++ Y K + L
Sbjct: 47 ASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLE 106
Query: 182 -ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAA 238
ARKVFD + +R++ SW+ MI+ YA NG A+ + L+ +M G + V A
Sbjct: 107 VARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLA 165
Query: 239 CASAEAVKEG 248
CA A A++ G
Sbjct: 166 CAHAGAIQTG 175
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 202/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F DV N L+ Y KC + A F L
Sbjct: 512 VLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGL 571
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF +M G P+ T V +AC A V +
Sbjct: 572 PERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAK 631
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE MK +GI EHY +I +LG AG L +A E V MPF+ VW AL +++
Sbjct: 632 KYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRV 691
Query: 310 HGDVELEDRAEELLGDLDPSKA--------------IVDKIPLPPR-------KKQSATN 348
H D EL A E L L+P K+ + D++ + KK+ A +
Sbjct: 692 HRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMS 751
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + +S + R Y K+ L M +AGYVP+ LHD+D KE L
Sbjct: 752 WVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLL 811
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ LISTP P+R+ KNLRIC DCH A K +SKIV RE+I+RD RFHHF
Sbjct: 812 SHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHF 871
Query: 465 RDGKCSCGDYW 475
+G CSCGDYW
Sbjct: 872 TNGTCSCGDYW 882
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C + +E G++VH + + + KDV N L++MY K + +A VF+++
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP 267
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW+ ISG +G L L QM+ +G P+ T V ACA A A G
Sbjct: 268 AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 251 YFEIMKNDYGIVPGIEHYIAI--IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
M V + ++A+ + + G L +A + + MP + +W AL
Sbjct: 328 IHGFMVK---AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLI-LWNAL 378
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL----RKRNLSSWHL 199
+ G +VH L + V DV + N L+ +YG AR++FD+ +RN SW+
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY 259
MIS Y N Q D + +F +M +G P++ F V AC + ++ G + +
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAG-------RQVH 228
Query: 260 GIV--PGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
G V G E + A++ + G + A E+MP V W A + HG
Sbjct: 229 GAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVS-WNAFISGCVTHGH- 286
Query: 314 ELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA 346
+ RA ELL + S + + L K A
Sbjct: 287 --DHRALELLLQMKSSGLVPNVFTLSSVLKACA 317
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 93 AQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRV 150
A + S + + G A+E + Q S+ +VF SS+L +C + +G+++
Sbjct: 269 ADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQI 328
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H + + D + L++MY K ARKVFD + +R+L W+ +ISG + +G+
Sbjct: 329 HGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 388
Query: 211 ADGLMLFEQMRKTGPHPD--KETFLVVFAACASAEAV 245
+ L LF +MRK G D + T V + AS+EA+
Sbjct: 389 GEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAI 425
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L S + ++I ++VH L + D + N LI+ Y KC A KVF + R
Sbjct: 412 LASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESR 471
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ S M++ + G D + LF QM + G PD + AC S A ++G
Sbjct: 472 SDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ S L G +S+ G +H L S + +N L+ +Y +C AR VFD+
Sbjct: 5 ETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDE 62
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ SW +++ Y+ NG D L+ F MR G P E L V CA
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV-PCNEFALPVVLKCA 113
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 221/395 (55%), Gaps = 28/395 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK EA+ + S D F+ SLL +C + ++ +GKRVH + +++ +
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GP 225
N L+++Y +C A+ +FD++ +N SW +I G A NG G + + LF+ M T G
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P + TF+ + AC+ VKEGF YF M+ +Y I P IEH+ ++ +L AG + +A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS---------------- 329
E+++ MP +P V +W L +HGD +L + A + L+P+
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 307
Query: 330 -----KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMR 380
+ I ++ KK +++E NRV ++ D + Y K+K + G++R
Sbjct: 308 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 367
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GYVP V D++EE KE A+ YHSE++AIA+ LISTP R P+ ++KNLR+C DCH
Sbjct: 368 SEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 427
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK++SK+ RE++VRD RFHHF++G CSC DYW
Sbjct: 428 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
+ + +G+ +H ++ S F + + N L+ +Y C + A KVFD++ +++L +W+ +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
I+G+A NG+ + L L+ +M G PD T + + +ACA A+ G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 217/390 (55%), Gaps = 27/390 (6%)
Query: 113 EAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EA E + A G + F+ SLL ++ +I G+++H + S F ++ + N LI
Sbjct: 334 EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALI 393
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
MY +C N A +VF+++ N+ SW MI+G+A +G L F +M + G P++
Sbjct: 394 SMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEV 453
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
T++ V +AC+ + EG +F+ MK ++GIVP +EHY ++ +LG +GHL EA E V
Sbjct: 454 TYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNS 513
Query: 291 MPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS--------------------- 329
MPF+ V ++HG+++L A E++ + DP
Sbjct: 514 MPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEV 573
Query: 330 KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYV 385
I K+ K++ + +E +N+V + D + Y+++ L +++E GY+
Sbjct: 574 AEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYI 633
Query: 386 PDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIM 445
P T +VLHD++EE KE+ L HSE++A+AYG IST P+R+ KNLR+CGDCH A K
Sbjct: 634 PSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYF 693
Query: 446 SKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
S + +E+++RD RFHHF+DG CSC DYW
Sbjct: 694 SIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G REAIE + + FSS+L +C NL I +G++V+ L+ +
Sbjct: 229 GCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVG 288
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI MY +C N ARK FD L ++NL S++ +++ YA + + LF ++ G
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTG 348
Query: 227 PDKETFLVVFAACASAEAVKEG 248
+ TF + + +S A+ +G
Sbjct: 349 VNAFTFASLLSGASSIGAIGKG 370
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
F+ + +C N ++I +GK + LL+T F DV + LI+M+ K N L A KVFD
Sbjct: 45 FTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKG-NGDLESAYKVFD 103
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ RN+ +W LMI+ + G D + LF M +G PD+ T V +ACA +
Sbjct: 104 RMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSL 163
Query: 248 GF-LYFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + +MK+ D + G K + G + +A + +RMP V W A+
Sbjct: 164 GRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVAD-GSVDDARKVFDRMPVH-NVMSWTAI 220
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC---NTRLARKVFD 187
S ++ +C + + +G++ H L+ S DV + L++MY KC + ARKVFD
Sbjct: 148 LSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFD 207
Query: 188 QLRKRNLSSWHLMISGYAANGQGAD--GLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
++ N+ SW +I+GY +G G D + LF +M + P+ TF V ACA+ +
Sbjct: 208 RMPVHNVMSWTAIITGYVQSG-GCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDI 266
Query: 246 KEG 248
G
Sbjct: 267 WLG 269
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR+L SW +IS YA N + + + F M + G +P++ F VF AC++ E + G +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSA-GHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F + + A+I + G L A + +RMP + V W + Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTWTLMITRFQQ 122
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPL 338
G A +L D+ S + D+ L
Sbjct: 123 LG---FSRDAVDLFLDMVLSGYVPDRFTL 148
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 216/401 (53%), Gaps = 34/401 (8%)
Query: 109 GKVREAI---EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE- 164
G+ +EA+ M +D F+ + ++CG ++ +E G+ +H L S +K
Sbjct: 102 GRGQEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDLEQGREIHALAMASGELKSSSP 161
Query: 165 -LNNKLIEMYGKCCNTRLARKVFDQLRK----RNLSSWHLMISGYAANGQGADGLMLFEQ 219
L N L+ M+ + + ARKVFD + N SW MI+ A +GQG + L LF++
Sbjct: 162 ILENALLNMFVRFGSLEEARKVFDAMDHPDAFSNSVSWTAMIAALAQHGQGDEALELFKE 221
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M G D TF+ V AC+ A +KE +F M DY I P HY + +G AG
Sbjct: 222 MNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAG 281
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--------- 330
L +AEE + MPF P W+ L N +IH E + ELL L P
Sbjct: 282 RLQDAEELIHSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGN 341
Query: 331 --AIVDKIPLPPRKKQSATN----------MLEEKNRVSDYRSTDLYRGEYEK----MKG 374
A ++ R ++S T+ +E KN+V ++ + D ++ ++
Sbjct: 342 VYAATERYGDQMRVRKSMTDRGLKKVPRKSFIEVKNKVHEFVAGDRAHPSRDEILLELEK 401
Query: 375 LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
L G+MREAGYVP+T+ VLH ++EE KE+ + HSE+LAIA+GLI+TPP PL I+KNLR+
Sbjct: 402 LGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRV 461
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
C DCH A K+++KI+ R ++VRD RFHH DG+CSC DYW
Sbjct: 462 CSDCHAATKVIAKIMRRRIVVRDTHRFHHLEDGQCSCKDYW 502
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S L SC +LKS E G R+H + ++ + N L+ Y KC A K+F ++
Sbjct: 21 TISVALSSCSSLKSFERGARIHRWADEHGYGSNLLVQNALVNFYAKCSKIPEAMKLFGEM 80
Query: 190 RK---RNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAV 245
+ R + SW MI YA +G+G + L+LF +MRK G P+ TF VF AC E +
Sbjct: 81 SERTSRTVVSWSAMIGAYALHGRGQEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDL 140
Query: 246 KEG 248
++G
Sbjct: 141 EQG 143
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 215/368 (58%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ SC NL S+E G + H S + V ++N LI +YGKC + A ++F +++ R
Sbjct: 376 SVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW ++SGYA G+ + + LFE M G PD TF+ V +AC+ A V++G+ YF
Sbjct: 436 DEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYF 495
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M ++ I P +HY +I +L AG L EA+ F+ +MPF P W L + +++G+
Sbjct: 496 ECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGN 555
Query: 313 VELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNMLE 351
+E+ A E L L+P +K D + + KK+ + ++
Sbjct: 556 LEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIK 615
Query: 352 EKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
KN+V +D RS+ Y K++ L +M E GYVPD +VLHD+++ K K L +H
Sbjct: 616 YKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHH 675
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL+ P + +R++KNLR+CGDCHNA K +S+I RE++VRD RFH F+DG
Sbjct: 676 SEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDG 735
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 736 VCSCGDFW 743
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+ L + G +EA++ + D F S+L +CG +++ GK++H + + +
Sbjct: 242 ITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++ + + L++MY KC N + A VF ++R +N+ SW M+ GY NG + + +F
Sbjct: 302 QDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCD 361
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M++ HPD T V ++CA+ +++EG F G++ + A+I + G G
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEG-AQFHGQALASGLICFVTVSNALITLYGKCG 420
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
L A + M V W AL
Sbjct: 421 SLEHAHQLFHEMKIRDEVS-WTAL 443
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S+S+ Y +++ L C ++ K++H + + + L N LI YGK + + A
Sbjct: 2 SSSSNY--YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNA 59
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
R VFD + + NL SW+ ++S Y+ G D +F+ M P+ D ++ + + A
Sbjct: 60 RNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSM----PNHDVVSWNSLLSGYAGN 115
Query: 243 EAVKEGFLYFEIMKND 258
+ E + +M D
Sbjct: 116 GLISESVRVYNMMLKD 131
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M +D S + FS++L N +++G+++H + + + + + L++MY K
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 178 NTRLARKVFDQLRKRNLS-------------------------------SWHLMISGYAA 206
A ++F+++ ++N+ SW +I+G
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY 259
NG + + F++M G D+ TF V AC A+ EG ++ I++ DY
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N L+ Y K + ++VFD + ++ SW+ ++SGYA NG ++ + ++ M K G
Sbjct: 75 NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDG 132
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 205/370 (55%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ + SC L S++ G+++H + + + N LI MY +C A VF +
Sbjct: 413 YAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMP 472
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MI+ A +G G + L+E+M K PD+ TFL + +AC+ A VKEG
Sbjct: 473 YVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRH 532
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M+ YGI P +HY +I +L AG EA+ E MPFEP +WEAL IH
Sbjct: 533 YFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIH 592
Query: 311 GDVEL----EDRAEEL-----------------LGDLDPSKAIVDKIPLPPRKKQSATNM 349
G++EL DR EL LG D + + KK+ +
Sbjct: 593 GNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSW 652
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N V + D E Y ++ L +MR+ GYVPDT++VLHD++ E KE AL
Sbjct: 653 IEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALS 712
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ YG++ P +R+ KNLRICGDCHNA K +SK+V RE+IVRD KRFHHFR
Sbjct: 713 THSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFR 772
Query: 466 DGKCSCGDYW 475
+G+CSC +YW
Sbjct: 773 NGECSCSNYW 782
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 47/221 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLRTSA-----FVKDVELNNKLIEMYGKCCNTRLARK 184
++S++ + N +G++VH +LRT FV V NN LI +Y +C AR+
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSV--NNALITLYTRCGKLVEARR 334
Query: 185 VFDQLRKRNLSSWH-------------------------------LMISGYAANGQGADG 213
VFD++ ++L SW+ +MISG A NG G +G
Sbjct: 335 VFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEG 394
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMK--NDYGIVPGIEHYIA 270
L LF QM+ G P + A+C+ ++ G L+ +I++ +D + G A
Sbjct: 395 LKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVG----NA 450
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+I + G + A+ MP+ +V W A+ HG
Sbjct: 451 LITMYSRCGLVEAADTVFLTMPYVDSVS-WNAMIAALAQHG 490
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 33/133 (24%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
L + VH + TS F + N+LI+ Y K N AR +FD++ K ++ +
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 199 LMISGYAANGQ---------------------------------GADGLMLFEQMRKTGP 225
M+S Y+A G G L LF QM++ G
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126
Query: 226 HPDKETFLVVFAA 238
PD TF V A
Sbjct: 127 VPDPFTFSSVLGA 139
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++ + + +W+ MISGY G + L +M G D+ T+ V +A ++
Sbjct: 227 ARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASN 286
Query: 242 AEAVKEGF-LYFEIMKNDYGIVPGIEHYI-----AIIKVLGSAGHLIEAEEFVERMPFEP 295
A G ++ +++ +V H++ A+I + G L+EA ++MP +
Sbjct: 287 AGLFNIGRQVHAYVLRT---VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKD 343
Query: 296 TVEVWEAL 303
V W A+
Sbjct: 344 LVS-WNAI 350
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/374 (39%), Positives = 221/374 (59%), Gaps = 29/374 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FS +L++C ++ ++E G +H S DV + + L++MY KC A KVF +
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSM 749
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++N SW+ MISGYA +G G L +FE+M+++G PD TF+ V +AC+ A V+ G
Sbjct: 750 SQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGL 809
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE+M+ DYGI+P IEHY +I +LG AG L + +E+++RMP +P +W + Q
Sbjct: 810 DYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQ 868
Query: 310 ---HGDVELEDRAEELLGDLDPSKAI---------------------VDKIPLPPRKKQS 345
++L A +L +L+P + + KK++
Sbjct: 869 SKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEA 928
Query: 346 ATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+ + + V + RS + YEK+ L ++R AGYVP T YVLHD++EE KE
Sbjct: 929 GRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKE 988
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+ L+YHSE+LA+A+ L + P+RI+KNLR+CGDCH A + +S+IVGR++I+RD+ RF
Sbjct: 989 ELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRF 1048
Query: 462 HHFRDGKCSCGDYW 475
HHF+DGKCSCGDYW
Sbjct: 1049 HHFKDGKCSCGDYW 1062
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 9/193 (4%)
Query: 117 YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKR----VH-ELLRTSAFVKDVELNNKLIE 171
+MG SA+ D + LL + + E G R VH +LR + + ++N L+
Sbjct: 367 FMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVN 426
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY KC A +VF + R+ SW+ +I+ NG +M + MR+ P
Sbjct: 427 MYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFA 486
Query: 232 FLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
+ ++CA + G L+ + +K +G+ A++K+ G G + E E
Sbjct: 487 AISGLSSCAGLGLLAAGQQLHCDAVK--WGLYLDTSVSNALVKMYGECGRMSECWEIFNS 544
Query: 291 MPFEPTVEVWEAL 303
M V W ++
Sbjct: 545 MSAHDVVS-WNSI 556
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + L + L +E+GK++H ++ +D ++N L+ Y K + ++F ++
Sbjct: 588 TFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRM 647
Query: 190 R-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+ SW+ MISGY NG + + M + D TF +V ACAS A++ G
Sbjct: 648 SGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERG 707
Query: 249 F 249
Sbjct: 708 M 708
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 67/165 (40%), Gaps = 16/165 (9%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
D+ L N L+ Y K AR+VFD + RN SW +ISG+ +G D LF
Sbjct: 95 GLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLF 154
Query: 218 EQMRKTGP--HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI------ 269
M + GP P TF V AC + + GF +G+V E
Sbjct: 155 RAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV-----QVHGLVSKTEFTSNTTVCN 209
Query: 270 AIIKVLGSA--GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
A+I + GS G I A+ + P + W AL + GD
Sbjct: 210 ALISMYGSCSVGPPILAQRVFDTTPVRDLI-TWNALMSVYAKRGD 253
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 9/219 (4%)
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
D + N + +LD N C+ + + M Q++ + + S L SC L +
Sbjct: 448 DRISWNTIITALDQN--GYCEAAMMNYCL--MRQNSIGPSNFAAISGL-SSCAGLGLLAA 502
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+++H D ++N L++MYG+C ++F+ + ++ SW+ I G A
Sbjct: 503 GQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWN-SIMGVMA 561
Query: 207 NGQG--ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
+ Q + + +F M K+G P+K TF+ AA ++ G +M +G+
Sbjct: 562 SSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTED 620
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ +G + E RM W ++
Sbjct: 621 NAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSM 659
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 130 VFSSLLDSCGNLKSIEMG--KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR--LARKV 185
F S+L +C + +G +VH L+ + F + + N LI MYG C LA++V
Sbjct: 170 TFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRV 229
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
FD R+L +W+ ++S YA G LF M+
Sbjct: 230 FDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 26/382 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A A ++S++ +C +L S+ +GK++H + S ++ +V + L++MY KC +
Sbjct: 493 QRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSI 552
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ A ++F ++ RN SW+ +IS YA NG G L LFE+M ++G PD + L + AC
Sbjct: 553 KDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCAC 612
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ V+EG YF+ M Y +VP EHY + I +L G EAE+ + +MPFEP +
Sbjct: 613 SHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIM 672
Query: 300 WEALRNFAQIHGDVELEDRAE------ELLGDLDPSKAI------------VDKIPLPPR 341
W ++ N IH + EL +A ++L D P + V K+ R
Sbjct: 673 WSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMR 732
Query: 342 ----KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLH 393
KK A + +E K++ + + D R +K+ L +M + GY PD+ LH
Sbjct: 733 ERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALH 792
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
++DEE K ++L+YHSER+AIA+ LISTP P+ ++KNLR C DCH AIK++SKIV RE+
Sbjct: 793 NVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREI 852
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
VRD+ RFHHFRDG C+C DYW
Sbjct: 853 TVRDSSRFHHFRDGFCTCRDYW 874
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 12/235 (5%)
Query: 94 QLESLDVNLLSLCK--EGKVREAIEYMGQDASASAGYD----VFSSLLDSCGNLKSIEMG 147
+++ + N+L C G+V+E++E + G+D F++LL ++++G
Sbjct: 362 EVDGISYNVLVTCYAWNGRVKESLELFKE--LQFTGFDRRNFPFATLLSIAAISLNLDIG 419
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+++H + + ++ + N L++MY KC A ++F L ++ W MIS Y
Sbjct: 420 RQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQK 479
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIE 266
G DGL LF +M++ D T+ + ACAS ++ G L+ I+ + Y + +
Sbjct: 480 GLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGY--ISNVF 537
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
A++ + G + +A + + MP +V W AL + +GD + R E
Sbjct: 538 SGSALVDMYAKCGSIKDALQMFQEMPVRNSVS-WNALISAYAQNGDGDCTLRLFE 591
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 83 QNTND-PLRGNAQLESLDVNLLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCG 139
Q ND P R + +L L KEG REAI + Q+ F+++L +
Sbjct: 254 QLFNDIPERDSVTFNAL---LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310
Query: 140 NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
L IE G++VH + FV +V + N L++ Y K A K+F ++ + + S+++
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370
Query: 200 MISGYAANGQGADGLMLFEQMRKTG 224
+++ YA NG+ + L LF++++ TG
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTG 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K++ N +I Y K N AR +FD + +R +W ++I GYA N Q + LF +M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKE 247
+ G PD + + + ++V E
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNE 216
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 210/372 (56%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS+L CG ++MG+ +H L ++F + + LI +Y KC A VF+++
Sbjct: 226 TLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEV 285
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG 248
RNL W+ M+ A + LF++M+ G + TFL V AC+ A V++G
Sbjct: 286 TVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKG 345
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YFE+MK DYGI PG +HY ++ +LG AG L +A + +E MP EPT VW AL +
Sbjct: 346 KYYFELMK-DYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCR 404
Query: 309 IHGDVELE----DRAEEL-----------------LGDLDPSKAIVDKIPLPPRKKQSAT 347
+HG+ +L DR EL G + + + KK++
Sbjct: 405 LHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGL 464
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +EE NR+ + + D + Y+K+ L +M +AGYV DT +VL ++D E K ++
Sbjct: 465 SWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRS 524
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
++YHSERLAIA+G I+ P P+R++KNLR+CGDCH AIK +SK GR +IVRDN RFH
Sbjct: 525 IRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHR 584
Query: 464 FRDGKCSCGDYW 475
F DGKC+CGDYW
Sbjct: 585 FEDGKCTCGDYW 596
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F S SCG L S+ + K +H +A+ D+ + + +I+MY KC + A VFD++
Sbjct: 123 IFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEM 182
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
RN+ SW +I GY G+ + L LF++
Sbjct: 183 PYRNVVSWSGLIYGYVQLGEDDESLRLFKRF 213
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 210/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C L +++ G+ +H L S F DV + + L+ MY KC N A++VFD+ +
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +I+GYA +G G + L +F M +G PD TF+ V +AC+ VK+G F
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ Y + IEHY ++ +LG AG L EA + +E+MP E +W AL + H
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLE--EKNRVSDYR--STDL 364
++L + A + L L+P A ++ I + + RVS Y S +
Sbjct: 597 LDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Query: 365 YRGEYEKMKG------------------LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ K G L+G +REAGY PD +VLHD+DEE K ++L+Y
Sbjct: 657 VEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEY 716
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+AYGL+ P MP+R++KNLR+CGDCH AIK+++K+ GRE+I+RD RFHHF+D
Sbjct: 717 HSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKD 776
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 777 GSCSCRDYW 785
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+K V N +I +G+ AR+VFDQ+R+++ +W MI Y G D L LF
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRM 402
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA--IIKVLG 276
M++ G P+ + + V + CA + G ++ +++++ + ++ Y+A ++ +
Sbjct: 403 MQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQF----DLDVYVASVLLSMYI 458
Query: 277 SAGHLIEAEEFVERMPFEPTVEVW--------------EALRNFAQIH 310
G+L +A++ +R + V +W EALR F +H
Sbjct: 459 KCGNLAKAKQVFDRFAVKDVV-MWNSIITGYAQHGLGVEALRVFHDMH 505
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI Y + AR VFD++R +N+ SW+ +++GY N + + +F++M +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ ++ + + + + E F+ M + + A+++ G + EAE
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMPE-----RNVVSWTAMVRGYVKEGMISEAET 212
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL--LGDLDPSKAIVDK 335
+MP E V W + G + E R +E L D+ P K +V +
Sbjct: 213 LFWQMP-EKNVVSWTVML------GGLLQEGRIDEACRLFDMMPEKDVVTR 256
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 10/143 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KDV +I Y + AR +FD++ +RN+ SW MI+GY N Q LFE M
Sbjct: 251 KDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM 310
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P ++ ++ + + + E F M + + A+I G G
Sbjct: 311 ----PEKNEVSWTAMLKGYTNCGRLDEASELFNAMP-----IKSVVACNAMILCFGQNGE 361
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
+ +A + ++M E W A+
Sbjct: 362 VPKARQVFDQMR-EKDEGTWSAM 383
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 210/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C L +++ G+ +H L S F DV + + L+ MY KC N A++VFD+ +
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +I+GYA +G G + L +F M +G PD TF+ V +AC+ VK+G F
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ Y + IEHY ++ +LG AG L EA + +E+MP E +W AL + H
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLE--EKNRVSDYR--STDL 364
++L + A + L L+P A ++ I + + RVS Y S +
Sbjct: 597 LDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Query: 365 YRGEYEKMKG------------------LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ K G L+G +REAGY PD +VLHD+DEE K ++L+Y
Sbjct: 657 VEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEY 716
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+AYGL+ P MP+R++KNLR+CGDCH AIK+++K+ GRE+I+RD RFHHF+D
Sbjct: 717 HSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKD 776
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 777 GSCSCRDYW 785
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+K V N +I +G+ AR+VFDQ+R+++ +W MI Y G D L LF
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRM 402
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA--IIKVLG 276
M++ G P+ + + V + CA + G ++ +++++ + ++ Y+A ++ +
Sbjct: 403 MQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQF----DLDVYVASVLLSMYI 458
Query: 277 SAGHLIEAEEFVERMPFEPTVEVW--------------EALRNFAQIH 310
G+L +A++ +R + V +W EALR F +H
Sbjct: 459 KCGNLAKAKQVFDRFAVKDVV-MWNSIITGYAQHGLGVEALRVFHDMH 505
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI Y + AR VFD++R +N+ SW+ +++GY N + + +F++M +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ ++ + + + + E F+ M + + A+++ G + EAE
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMPE-----RNVVSWTAMVRGYVKEGMISEAET 212
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL--LGDLDPSKAIVDK 335
+MP E V W + G + E R +E L D+ P K +V +
Sbjct: 213 LFWQMP-EKNVVSWTVM------LGGLLQEGRIDEACRLFDMMPEKDVVTR 256
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 10/143 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KDV +I Y + AR +FD++ +RN+ SW MI+GY N Q LFE M
Sbjct: 251 KDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM 310
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P ++ ++ + + + E F M + + A+I G G
Sbjct: 311 ----PEKNEVSWTAMLKGYTNCGRLDEASELFNAMP-----IKSVVACNAMILCFGQNGE 361
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
+ +A + ++M E W A+
Sbjct: 362 VPKARQVFDQMR-EKDEGTWSAM 383
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 25/312 (8%)
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +N+ SW+ MI GY +G G D L+LF QM++ G P++ TF+ V +AC+ A V EG
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ + M DY I P +EHY ++ +LG AGHL EA +F+E+MP EP VW A +
Sbjct: 61 WKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCR 120
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
IH ++EL +R ELL +LDP A + + KK
Sbjct: 121 IHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGC 180
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+++E N++ + D+ + Y ++ L QM GYVP T +VLHD++EE KE
Sbjct: 181 SLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENM 240
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GLIST +RI KNLR+CGDCH+A K +SKIV RE+I+RD RFHH
Sbjct: 241 LFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNRFHH 300
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 301 FKDGLCSCGDYW 312
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 212/372 (56%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F S+L +C L ++++GK +H + + + L LI+MY KC N A++VF
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ ++L SW+ MISG A +G L LF QMR G PD TF+ V +AC+ A V+ G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
F M DY I P ++HY +I +LG AG EAE ++ M +P +W +L +
Sbjct: 487 RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
+HG+VEL + A + L +L+P I K+ KK
Sbjct: 547 VHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGC 606
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + V ++ D + Y+ + ++ + +AG+VPDT VL+D+DEE KE +
Sbjct: 607 SSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGS 666
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L +HSE+LAIA+GLIST P +RI+KNLR+CG+CH+AIK++SKI RE+I RD RFHH
Sbjct: 667 LSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHH 726
Query: 464 FRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 727 FKDGSCSCMDYW 738
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+ + + A+ + ++L +C S+E+G V + ++
Sbjct: 241 QSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLR 300
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L N LI+MY KC + AR +F+ + ++++ SW++MI GY+ + L LF +M+++
Sbjct: 301 LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSN 360
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P+ TF+ + ACA A+ G +++ I K G+ + ++I + G++
Sbjct: 361 VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIEA 419
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
A++ M ++ W A+ + +HG +
Sbjct: 420 AKQVFAGMK-PKSLGSWNAMISGLAMHGHANM 450
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 36/193 (18%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-------- 181
F LL SC + + + GK++H + D ++ LI MY + N L
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQ--NGELGYAELVFS 191
Query: 182 -------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
AR++F+++ R+ SW+ MI+GYA +G+ + L
Sbjct: 192 KSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAF 251
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F++M++ P++ T + V +ACA + +++ G + D+G+ + A+I +
Sbjct: 252 FQEMKRANVAPNESTMVTVLSACAQSGSLELGN-WVRSWIEDHGLGSNLRLVNALIDMYS 310
Query: 277 SAGHLIEAEEFVE 289
G L +A + E
Sbjct: 311 KCGDLDKARDLFE 323
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 133/330 (40%), Gaps = 43/330 (13%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEM-----YGKCCNTRLARKVF 186
+LL +C KS + K++H ++++T L+ KLIE +G N A +F
Sbjct: 37 TLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALS-KLIEFCAISPFG---NLSYALLLF 89
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+ + + N W+ MI G + + + + +M G P+ TF + +CA A +
Sbjct: 90 ESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149
Query: 247 EG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
EG ++ ++K P + + ++I + G L AE + V +
Sbjct: 150 EGKQIHGHVLKLGLESDPFV--HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLY 365
+ L G LD ++ + ++IP+ R S M ++ Y +
Sbjct: 208 YT--------------LRGCLDDARRLFEEIPV--RDAVSWNAM------IAGYAQS--- 242
Query: 366 RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE-RLAIAYGLISTPPRM 424
G +E+ +M+ A P+ ++ + A+ +L+ + R I + + R+
Sbjct: 243 -GRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRL 301
Query: 425 PLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+I CGD A + I +++I
Sbjct: 302 VNALIDMYSKCGDLDKARDLFEGICEKDII 331
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 218/394 (55%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ REA+ + A A+ G S L +C L ++E GK VH + V L
Sbjct: 313 GRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLG 372
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC A +VFD + +RN+ +W +SG A NG G D L LF++M TG
Sbjct: 373 TALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVE 432
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+VV C+ A V EG F+ MK+++GI P +EHY ++ + G AG L +A
Sbjct: 433 PNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVN 492
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPPRK 342
F+ MP EP VW AL N ++IH +VEL A + L + D + ++ I +
Sbjct: 493 FINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQN 552
Query: 343 KQSATNM-----------------LEEKNRVSDY---RSTDLYRGEYEKMKG-LNGQMRE 381
+ +N+ +E +V ++ T E E M +N ++R
Sbjct: 553 WKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRL 612
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GY+ +T+ VL DI+EE KE A+ HSE+LAIA+GL++ P M +RI+KNLR+C DCH+
Sbjct: 613 QGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDY 672
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SK+ RE+++RD RFHHF+DG CSC DYW
Sbjct: 673 TKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + +R+ +W+ MI+GY G+ + L LF++MR G + T + ACA
Sbjct: 287 ARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQ 346
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
A++ G + + G+ + A+I + G + A E + M E V W
Sbjct: 347 LGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG-ERNVYTWT 404
Query: 302 A 302
+
Sbjct: 405 S 405
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 223/397 (56%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++GK E I + A F+S+L +C NL SI +G+++H LL S F+ +V
Sbjct: 420 QKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVY 479
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L++ Y KC A K F ++ +RN SW+ +IS YA NG L F+QM ++G
Sbjct: 480 SGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG 539
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD +FL V +AC+ V+E +F M Y + P EHY +++ VL G EA
Sbjct: 540 YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEA 599
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAI-------- 332
E+ + MPFEP+ +W ++ N +IH + EL +A + L ++ D + I
Sbjct: 600 EKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAV 659
Query: 333 ------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKM----KGLNGQ 378
V K+ R +K A + +E K++ + + D E +K+ L+ +
Sbjct: 660 AGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKE 719
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
M + GY PDT LHD+DE K ++L+YHSER AIA+ L++TP P+ ++KNLR C DC
Sbjct: 720 MEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDC 779
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H AIK++S+IV RE+IVRD+ RFHHF+DG CSCGDYW
Sbjct: 780 HAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++LL + ++ MG+++H T + + N L++MY KC + A+K+FD +
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ W MIS Y G+ +G+ +F MR+TG D+ TF + ACA+ ++ G
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ G + + A++ G + +A + MP +V W AL + +
Sbjct: 465 LHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS-WNALISAYAQN 522
Query: 311 GDVE 314
G+V+
Sbjct: 523 GNVD 526
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 108 EGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
EG EAIE + ++ F++LL + L + G++VH + + FV +V +
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
N L++ Y K K+F ++ + + S++++I+ YA NGQ + LF +++ T
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFT 336
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + +R SW ++I GY + Q + L+ MR+ G PD T + + +
Sbjct: 93 ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE 152
Query: 242 AEA 244
E
Sbjct: 153 LET 155
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 218/394 (55%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ REA+ + A A+ G S L +C L ++E GK VH + V L
Sbjct: 313 GRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLG 372
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC A +VFD + +RN+ +W +SG A NG G D L LF++M TG
Sbjct: 373 TALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVE 432
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+VV C+ A V EG F+ MK+++GI P +EHY ++ + G AG L +A
Sbjct: 433 PNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVN 492
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPPRK 342
F+ MP EP VW AL N ++IH +VEL A + L + D + ++ I +
Sbjct: 493 FINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQN 552
Query: 343 KQSATNM-----------------LEEKNRVSDY---RSTDLYRGEYEKMKG-LNGQMRE 381
+ +N+ +E +V ++ T E E M +N ++R
Sbjct: 553 WKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRL 612
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GY+ +T+ VL DI+EE KE A+ HSE+LAIA+GL++ P M +RI+KNLR+C DCH+
Sbjct: 613 QGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDY 672
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SK+ RE+++RD RFHHF+DG CSC DYW
Sbjct: 673 TKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + +R+ +W+ MI+GY G+ + L LF++MR G + T + ACA
Sbjct: 287 ARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQ 346
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
A++ G + + G+ + A+I + G + A E + M E V W
Sbjct: 347 LGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG-ERNVYTWT 404
Query: 302 A 302
+
Sbjct: 405 S 405
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 220/403 (54%), Gaps = 28/403 (6%)
Query: 101 NLLSLCKE-GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
++++ C + G+ EA+E Q A LL +CGN+ ++ GK H
Sbjct: 356 SMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRR 415
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
DV + + LI+MY KC + +R FD + +NL W+ +I+GYA +G+ + + +F
Sbjct: 416 GISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIF 475
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+ M+++G PD +F V +AC+ + +EG YF M + YGI +EHY ++ +L
Sbjct: 476 DLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSR 535
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------ 331
AG L +A + RMP P VW AL + ++H +V L + A E L +L+PS
Sbjct: 536 AGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILL 595
Query: 332 ---------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEY----EKM 372
+ D + +K + +E KN+V + D + EK+
Sbjct: 596 SNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKL 655
Query: 373 KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNL 432
L+ +M++ GY P+ +VL D++E+ KE+ L HSE+LA+ +GL++TPP PL++IKNL
Sbjct: 656 DKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNL 715
Query: 433 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
RICGDCH IK +S RE+ VRD RFHHF++G CSCGDYW
Sbjct: 716 RICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L + G+L+ + MG +H + V D +++ LI+MYGKC T +VFDQ+
Sbjct: 254 SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDH 313
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ S + I G + NGQ L LF Q++ G + ++ + A C+ E
Sbjct: 314 MDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALEL 373
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE---AEEFVERMPFEPTVEVWEALRNFAQ 308
F M+ G+ P ++ G+ L+ A F R V V AL +
Sbjct: 374 FREMQ-IAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYA 432
Query: 309 IHGDVELEDRAEELLGDLDPSKAIV 333
G ++ A + D P+K +V
Sbjct: 433 KCGRIQ----ASRICFDGIPTKNLV 453
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S + +C L +++ ++VH + S F D + + L+ MY KC R A +VFD++
Sbjct: 116 VLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM 175
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ ++ SW +++ YA G + LF +M +G P+ ++ + A + E
Sbjct: 176 FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAV 235
Query: 250 LYF 252
L F
Sbjct: 236 LMF 238
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 16/216 (7%)
Query: 118 MGQDASASAGYDVFSSLLDSCGN--LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
M A A A D + +C N S+ ++ H + + D L KL+ Y
Sbjct: 1 MSLSAQALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN 60
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
A V D + + N+ S+ +I ++ Q L F QM G PD
Sbjct: 61 NMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSA 120
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGI--VPGI--EHYI--AIIKVLGSAGHLIEAEEFVE 289
ACA A+K + +GI V G + ++ +++ + + +A +
Sbjct: 121 VKACAGLSALKPA-------RQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
RM FEP V W AL G V+ R +GD
Sbjct: 174 RM-FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD 208
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 225/402 (55%), Gaps = 29/402 (7%)
Query: 99 DVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
D N +L + +E+ G AS ++ LL + +I G+++H L+ S
Sbjct: 423 DANAKALDSDESFNHEVEHTGVGASPFT----YACLLSGAACIGTIVKGEQIHALIVKSG 478
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
F ++ +NN LI MY KC N A +VF+ + RN+ +W +ISG+A +G L LF
Sbjct: 479 FGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFY 538
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+M + G P++ T++ V +AC+ + E + +F M ++ I P +EHY ++ +LG +
Sbjct: 539 EMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRS 598
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE--------------LLG 324
G L+EA EF+ MPF+ VW ++H + +L + A + LL
Sbjct: 599 GLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLS 658
Query: 325 DLDPSKAIVDKIP-----LPPRK--KQSATNMLEEKNRVSDYRSTDL----YRGEYEKMK 373
+L S+ D + + +K K++ + +E N+V + D R Y+++
Sbjct: 659 NLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELD 718
Query: 374 GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLR 433
L +++ GY+P+T +VLHD+++E KE+ L HSE++A+AY LISTP P+R+ KNLR
Sbjct: 719 ELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLR 778
Query: 434 ICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+CGDCH AIK +S + GRE++VRD RFHH +DGKCSC DYW
Sbjct: 779 VCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +C L+ +GK++H + S DV + L++MY K +RK+F+ +
Sbjct: 251 LTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTML 310
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
N+ SW +ISGY + Q + + LF M P+ TF V ACAS
Sbjct: 311 HHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACAS 361
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKC-CNTRLARKVFDQ 188
F++LL SC N G + LL+T F V + LI+M+ K + + AR VFD+
Sbjct: 148 FTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDK 207
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ +NL +W LMI+ Y+ G D + LF ++ + PDK T + +AC E G
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLG 267
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 10/213 (4%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-- 189
S LL +C ++E+GK +H L S D L N LI +Y KC + A +F +
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG---PHPDKETFLVVFAACASAEAVK 246
KR+L SW +IS +A N + L+ F M + +P++ F + +C++
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRN 305
G F + + A+I + G I++ V ++M + V +
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
++Q+ L D A +L L S+ DK L
Sbjct: 223 YSQL----GLLDDAVDLFCRLLVSEYTPDKFTL 251
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 223/397 (56%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++GK E I + A F+S+L +C NL SI +G+++H LL S F+ +V
Sbjct: 420 QKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVY 479
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L++ Y KC A K F ++ +RN SW+ +IS YA NG L F+QM ++G
Sbjct: 480 SGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG 539
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD +FL V +AC+ V+E +F M Y + P EHY +++ VL G EA
Sbjct: 540 YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEA 599
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAI-------- 332
E+ + MPFEP+ +W ++ N +IH + EL +A + L ++ D + I
Sbjct: 600 EKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAV 659
Query: 333 ------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKM----KGLNGQ 378
V K+ R +K A + +E K++ + + D E +K+ L+ +
Sbjct: 660 AGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKE 719
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
M + GY PDT LHD+DE K ++L+YHSER AIA+ L++TP P+ ++KNLR C DC
Sbjct: 720 MEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDC 779
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H AIK++S+IV RE+IVRD+ RFHHF+DG CSCGDYW
Sbjct: 780 HAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++LL + ++ MG+++H T + + N L++MY KC + A+K+FD +
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ W MIS Y G+ +G+ +F MR+TG D+ TF + ACA+ ++ G
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ G + + A++ G + +A + MP +V W AL + +
Sbjct: 465 LHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS-WNALISAYAQN 522
Query: 311 GDVE 314
G+V+
Sbjct: 523 GNVD 526
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 108 EGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
EG EAIE + ++ F++LL + L + G++VH + + FV +V +
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
N L++ Y K K+F ++ + + S++++I+ YA NGQ + LF +++ T
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFT 336
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + +R SW ++I GY + Q + L+ MR+ G PD T + + +
Sbjct: 93 ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE 152
Query: 242 AEA 244
E
Sbjct: 153 LET 155
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 210/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C +L +++MG+ +H +RT DV L N LI+MY KC A VF L ++
Sbjct: 210 SLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK 269
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ W+ +I G NG+G + + F M K G PD TF+ + + C+ + + G YF
Sbjct: 270 NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYF 329
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M YG+ PG+EHY ++ +LG AG+L EA E + MP +P V +L QIH D
Sbjct: 330 SEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKD 389
Query: 313 VELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNMLE 351
+L ++ + L +LDP S + D + + K + +E
Sbjct: 390 TKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIE 449
Query: 352 EKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N V ++ + D ++ ++ + +++ G+VP+T VLHDI+EE KE A++YH
Sbjct: 450 VNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYH 509
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SER+A+A+GL+STPP +R++KNLR C DCH+A+K++S RE+IVRD KRFHHFR+G
Sbjct: 510 SERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNG 569
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 570 SCSCNDYW 577
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFE 218
VKDV N +I+ Y K A+++F + RN +W+ MIS Y G+ + +F+
Sbjct: 135 VKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQ 194
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG 248
QM+ P + T + + +ACA A+ G
Sbjct: 195 QMQSENVKPTEVTMVSLLSACAHLGALDMG 224
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS +L SC ++G+ H + F D+ L L++ Y K + + A++VF +
Sbjct: 13 FSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMP 72
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+R++ + + MIS + +G + LF+ M
Sbjct: 73 RRDVVANNAMISALSKHGYVEEARNLFDNM 102
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 217/380 (57%), Gaps = 44/380 (11%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKL------IEMYGKCCNTRLAR 183
FSS++++C + + E GK+ H A+ + LNN L + MY K N A
Sbjct: 497 FSSVINACASPTAAAEQGKQFH------AYAIKMRLNNALCVSSALVTMYAKRGNIDSAH 550
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+VF + ++R+L SW+ MISGY+ +GQ L +F++M+K D TF+ V AC A
Sbjct: 551 EVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAG 610
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
V++G YF M ND+ I P ++HY +I + AG L +A + MPF P VW L
Sbjct: 611 LVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTL 670
Query: 304 RNFAQIHGDVELEDRAEELLGDLDPS------------------------KAIVDKIPLP 339
A++H +VEL + A E L L P + ++DK +
Sbjct: 671 LGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKV- 729
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLYR----GEYEKMKGLNGQMREAGYVPDTRYVLHDI 395
KK+ + +E KN+ + + DL Y K+ L+ ++++AGY PDT+ V HDI
Sbjct: 730 --KKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDI 787
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
++E KE L +HSERLAIA+GLI+TPP +P++I+KNLR+CGDCHN K++S + R ++V
Sbjct: 788 EDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVV 847
Query: 456 RDNKRFHHFRDGKCSCGDYW 475
RD+ RFHHF+DG CSCGDYW
Sbjct: 848 RDSNRFHHFKDGLCSCGDYW 867
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L S ++ + +EA+ +S D S + + C ++G++VH
Sbjct: 65 LFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGL 124
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V V + L++MY K N R+VFD++ +RN+ SW +++GY+ NG LF Q
Sbjct: 125 VDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQ 184
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M+ G P++ T V AA + V G L M +G I + ++I + G
Sbjct: 185 MQYEGVLPNRYTVSTVIAALVNEGVVGIG-LQVHAMVVKHGFEEAIPVFNSLISLYSRLG 243
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
L +A + ++M V W ++
Sbjct: 244 MLRDARDVFDKMEIRDWV-TWNSM 266
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+++ + N + +G +VH ++ F + + + N LI +Y + R AR VFD++
Sbjct: 198 STVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI 257
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS---------- 241
R+ +W+ MI+GY NGQ + +F +M+ G P TF V +CAS
Sbjct: 258 RDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLM 317
Query: 242 -AEAVKEGFLYFEIM 255
+A+K GF +I+
Sbjct: 318 QCKALKSGFTTDQIV 332
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
E+++T+ + + + L++ Y K NT A KVF+ + ++L +W M++GYA G+
Sbjct: 418 EVIKTN-YERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETE 476
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ LF Q+ K G P++ TF V ACAS A E F + + A+
Sbjct: 477 EAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSAL 536
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ + G++ A E +R E + W ++ + HG + +A E+ ++
Sbjct: 537 VTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQAK---KALEVFDEMQKRNM 592
Query: 332 IVDKIPL 338
VD +
Sbjct: 593 DVDAVTF 599
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A + F+S++ SC +L+ + + K + S F D + L+ KC
Sbjct: 287 QLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEM 346
Query: 180 RLARKVFDQLRK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV---- 234
A +F + + +N+ SW MISG NG + LF QMR+ G P+ T+
Sbjct: 347 DDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTV 406
Query: 235 ---VFAACASAEAVKEGF 249
VF + AE +K +
Sbjct: 407 HYPVFVSEMHAEVIKTNY 424
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 218/394 (55%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ REA+ + A A+ G S L +C L ++E GK VH + V L
Sbjct: 306 GRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLG 365
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC A +VFD + +RN+ +W +SG A NG G D L LF++M TG
Sbjct: 366 TALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVE 425
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+VV C+ A V EG F+ MK+++GI P +EHY ++ + G AG L +A
Sbjct: 426 PNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVN 485
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPPRK 342
F+ MP EP VW AL N ++IH +VEL A + L + D + ++ I +
Sbjct: 486 FINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQN 545
Query: 343 KQSATNM-----------------LEEKNRVSDY---RSTDLYRGEYEKMKG-LNGQMRE 381
+ +N+ +E +V ++ T E E M +N ++R
Sbjct: 546 WKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRL 605
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GY+ +T+ VL DI+EE KE A+ HSE+LAIA+GL++ P M +RI+KNLR+C DCH+
Sbjct: 606 QGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDY 665
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SK+ RE+++RD RFHHF+DG CSC DYW
Sbjct: 666 TKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 699
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + +R+ +W+ MI+GY G+ + L LF++MR G + T + ACA
Sbjct: 280 ARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQ 339
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
A++ G + + G+ + A+I + G + A E + M E V W
Sbjct: 340 LGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG-ERNVYTWT 397
Query: 302 A 302
+
Sbjct: 398 S 398
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 210/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C +L +++MG+ +H +RT DV L N LI+MY KC A VF L ++
Sbjct: 138 SLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK 197
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ W+ +I G NG+G + + F M K G PD TF+ + + C+ + + G YF
Sbjct: 198 NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYF 257
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M YG+ PG+EHY ++ +LG AG+L EA E + MP +P V +L QIH D
Sbjct: 258 SEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKD 317
Query: 313 VELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNMLE 351
+L ++ + L +LDP S + D + + K + +E
Sbjct: 318 TKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIE 377
Query: 352 EKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N V ++ + D ++ ++ + +++ G+VP+T VLHDI+EE KE A++YH
Sbjct: 378 VNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYH 437
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SER+A+A+GL+STPP +R++KNLR C DCH+A+K++S RE+IVRD KRFHHFR+G
Sbjct: 438 SERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNG 497
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 498 SCSCNDYW 505
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS +L SC ++G+ H + F D+ L L++ Y K AR +FD +
Sbjct: 33 FSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMT 92
Query: 191 KRNLSS--WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RN +S W+ MIS Y G+ + +F+QM+ P + T + + +ACA A+ G
Sbjct: 93 ERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMG 152
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 201/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F+ D N L+ Y KC + A F L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF +M G +P+ T V AC A V E
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI EHY +I +LG AG L +A E V MPF+ +W AL +++
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H D EL A E L L+P K A V K+ KK+ A +
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + +S + + Y K+ L M +AG+VP+ LHD+D KE L
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLL 806
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ L+STPP P+R+ KNLRIC DCH A K +SKIV RE+I+RD RFHHF
Sbjct: 807 SHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHF 866
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 867 RDGTCSCGDYW 877
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C ++IE G++VH ++ + KDV N L++MY K +A +F+++
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW+ +ISG NG + L QM+ +G P+ T + AC+ A A G
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGY 204
+G +VH + + F DV + N L+ MYG AR+VF++ +RN SW+ ++S Y
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
N Q D + +F +M +G P + F V AC + ++ G M G
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG-RQVHAMVVRMGYDKD 236
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ A++ + G + A E+MP + V W AL + ++G + RA ELL
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELL 291
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 102 LLSLCK-EGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSA 158
L+S C G AIE + Q + +VF SS+L +C + ++G+++H + +
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D + L++MY K ARKVFD + R+L + +ISG + G+ + L LF
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393
Query: 219 QMRKTGPHPDKETFLVVFAACASAE-----------AVKEGFLY 251
++RK G ++ T V + AS E AVK GF++
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 7/197 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L S +L++ ++VH L F+ D + N LI+ Y KC A +VF++
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECS 466
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ + MI+ + G + LF +M + G PD + ACAS A ++G
Sbjct: 467 SGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K + + A++ G + +AE +P E V W A+
Sbjct: 527 VHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQ 583
Query: 310 HGDVELEDRAEELLGDL 326
HG + RA EL G +
Sbjct: 584 HGHGK---RALELFGRM 597
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 147 GKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G +H LL++ + N LI Y KC AR+VFD++ SW +++ Y+
Sbjct: 23 GAHLHASLLKSGSLA---SFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 206 ANGQGADGLMLFEQMRKTG 224
NG + F MR G
Sbjct: 80 NNGLPRSAIQAFHGMRAEG 98
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 201/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F+ D N L+ Y KC + A F L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF +M G +P+ T V AC A V E
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI EHY +I +LG AG L +A E V MPF+ +W AL +++
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H D EL A E L L+P K A V K+ KK+ A +
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + +S + + Y K+ L M +AG+VP+ LHD+D KE L
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLL 806
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ L+STPP P+R+ KNLRIC DCH A K +SKIV RE+I+RD RFHHF
Sbjct: 807 SHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHF 866
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 867 RDGTCSCGDYW 877
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C ++IE G++VH ++ + KDV N L++MY K +A +F+++
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW+ +ISG NG + L QM+ +G P+ T + AC+ A A G
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGY 204
+G +VH + + F DV + N L+ MYG AR+VF++ +RN SW+ ++S Y
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
N Q D + +F +M +G P + F V AC + ++ G M G
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG-RQVHAMVVRMGYDKD 236
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ A++ + G + A E+MP + V W AL + ++G + RA ELL
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELL 291
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 102 LLSLCK-EGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSA 158
L+S C G AIE + Q + +VF SS+L +C + ++G+++H + +
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D + L++MY K ARKVFD + R+L + +ISG + G+ + L LF
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393
Query: 219 QMRKTGPHPDKETFLVVFAACASAE-----------AVKEGFLY 251
++RK G ++ T V + AS E AVK GF++
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 7/197 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L S +L++ ++VH L F+ D + N LI+ Y KC A +VF++
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECS 466
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ + MI+ + G + LF +M + G PD + ACAS A ++G
Sbjct: 467 SGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K + + A++ G + +AE +P E V W A+
Sbjct: 527 VHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQ 583
Query: 310 HGDVELEDRAEELLGDL 326
HG + RA EL G +
Sbjct: 584 HGHGK---RALELFGRM 597
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G +H L S + N LI Y KC AR+ FD++ SW +++ Y+
Sbjct: 23 GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 207 NGQGADGLMLFEQMRKTG 224
NG + F MR G
Sbjct: 81 NGLPRSAIQAFHGMRAEG 98
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS L +C L ++ +GK +H ++ +V + LI+MY KC + AR++F+ +
Sbjct: 416 TISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW+ MI+GY +GQGA+ L L++ M P TFL V AC+ V+EG+
Sbjct: 476 DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGW 535
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE-VWEALRNFAQ 308
F M +DY I PGIEH ++ +LG AG L EA E + P VW AL
Sbjct: 536 KVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACM 595
Query: 309 IHGDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPRK--KQSAT 347
+H D +L A + L +LDP S+A V + RK K
Sbjct: 596 VHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGY 655
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
++E N+ + + D + Y ++ L +M EAGY P+T L+D++EE KE
Sbjct: 656 TLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHM 715
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
++ HSE+LAIA+GL+ST P +RIIKNLR+C DCHNA K +SK+ R ++VRD RFHH
Sbjct: 716 VKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHH 775
Query: 464 FRDGKCSCGDYW 475
FRDG CSCGDYW
Sbjct: 776 FRDGVCSCGDYW 787
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+ + +H + S F + ++ + ++ + + ARK FD + ++ + SW+ MISGYA
Sbjct: 331 LAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYA 390
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPG 264
NG + LFEQM K P+ T +ACA A+ G +L+ I + D + P
Sbjct: 391 QNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED--LEPN 448
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ A+I + G + EA M + V W A+ +HG
Sbjct: 449 VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS-WNAMIAGYGLHG 494
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 101 NLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV 160
LL+ + E+ M D S +S+L + + + MG+ VH
Sbjct: 185 TLLAGLSGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLA 244
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+ + LI +Y KC + AR +FD + K +L +++ +ISGY+ NG + LF ++
Sbjct: 245 EHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTEL 304
Query: 221 RKTGPHPDKETFLV-----------VFAACASAEAVKEGF 249
G P+ T + + A C +K GF
Sbjct: 305 MTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGF 344
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 200/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F+ D N L+ Y KC + A F L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF +M G +P+ T V AC A V E
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI EHY +I +LG AG L +A E V MPF+ VW AL +++
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 686
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H D EL A E L L+P K A V K+ KK+ A +
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + +S + + Y K+ L M +AGY+P+ LHD+D KE L
Sbjct: 747 WVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLL 806
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ L+STPP P+R+ KNLRIC DCH A K +S IV RE+I+RD RFHHF
Sbjct: 807 SHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHF 866
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 867 RDGTCSCGDYW 877
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISG 203
++G +VH + + F DV + N L+ MYG AR+VFD+ +RN SW+ ++S
Sbjct: 117 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
Y N Q D + +F +M +G P + F V AC + + G M G
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG-RQVHAMVVRMGYEK 235
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ A++ + G + A E+MP + V W AL + ++G + RA ELL
Sbjct: 236 DVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELL 291
Query: 324 GDLDPSKAIVDKIPLPPRKKQSA 346
+ S + + L K A
Sbjct: 292 LQMKSSGLVPNVFMLSSILKACA 314
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C ++I+ G++VH ++ + KDV N L++MY K +A +F+++
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 264
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW+ +ISG NG + L QM+ +G P+ + ACA A A G
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 102 LLSLCK-EGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSA 158
L+S C G AIE + Q S+ +VF SS+L +C + ++G+++H + +
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 333
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D + L++MY K A KVFD + R+L W+ +ISG + G+ + +F
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFY 393
Query: 219 QMRKTGPHPDKETFLVVFAACASAEA 244
+RK G ++ T V + AS EA
Sbjct: 394 GLRKEGLGVNRTTLAAVLKSTASLEA 419
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L S +L++ ++VH L F+ D + N LI+ Y KC A +VF++
Sbjct: 407 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 466
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ + MI+ + G + LF +M + G PD + ACAS A ++G
Sbjct: 467 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K + + A++ G + +AE +P E V W A+
Sbjct: 527 VHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQ 583
Query: 310 HGDVELEDRAEELLG 324
HG + RA EL G
Sbjct: 584 HGHGK---RALELFG 595
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G +H L S F+ L N LI Y KC AR+VFD++ SW +++ Y+
Sbjct: 23 GAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
NG + F MR G ++ VV A+ + ++ M +G +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQ--VHAMAMATGFGSDVFVA 138
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ A++ + G G + +A + E W L
Sbjct: 139 N--ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGL 173
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 211/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++L + L ++E G+++H D + L++MY KC + A +F ++
Sbjct: 629 ATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 688
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
N+++W+ M+ G A +G+G + L LF+QM G PDK TF+ V +AC+ + V E + Y
Sbjct: 689 MNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKY 748
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
M DYGI P IEHY + LG AG + EAE ++ M E + ++ L ++ G
Sbjct: 749 IRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQG 808
Query: 312 DVELEDRAEELLGDLDP--SKAIV------------DKIPLPPR-------KKQSATNML 350
D E R L +L+P S A V D++ L KK + +
Sbjct: 809 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 868
Query: 351 EEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E KN+ V D RS Y+K+K + +++ GYVP+T + L D++EE KE+AL Y
Sbjct: 869 EVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYY 928
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+GL+STPP P+R+IKNLR+CGDCHNA+K +SK+ RE+++RD RFH F+D
Sbjct: 929 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKD 988
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 989 GICSCGDYW 997
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +CG L +I GK+VH S + D+ +++ +++MY KC + A+ FD +
Sbjct: 527 LATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 586
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +W +ISG NG+ L +F QMR G PD+ T + A + A+++G
Sbjct: 587 VPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 644
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L + L S+ +G++VH + + ++N LI MY K LAR VF+ +
Sbjct: 325 FILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMS 384
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+R+L SW+ +I+G A + + + LF Q+ + G PD T V A +S
Sbjct: 385 ERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS 435
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA-----DGLMLFEQ 219
L N LI MY KC + AR+VFD++ +R+L SW+ +++ YA + +G + +LF
Sbjct: 83 LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI--EHYI--AIIKVL 275
+R+ + + T + C + G++ + Y G+ + ++ A++ +
Sbjct: 143 LRQDVVYTSRMTLSPMLKLC-----LHSGYVCASESFHGYACKIGLDGDDFVAGALVNIY 197
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + E E MP+ V +W +
Sbjct: 198 LKFGKVKEGRVLFEEMPYRDVV-LWNLM 224
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 132 SSLLDSCGNL-KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L + +L + + + K++H + V D ++ LI+ Y + + A +F +
Sbjct: 427 TSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-N 485
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L +W+ M+SGY + G L LF M K G D T V C A+ +G
Sbjct: 486 NFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQG 543
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 220/370 (59%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L +C + +I+ GK +H + ++V + +++MY KC +ARK F +++
Sbjct: 300 LSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIK 359
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW MI+GY +G G + L +F +M ++G +P+ TF+ V AAC+ A + +G
Sbjct: 360 EKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRY 419
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ MK +GI PG+EHY ++ +LG AG L EA ++ M +P +W AL + +IH
Sbjct: 420 WYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIH 479
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATNM 349
+VEL + + + L +LD + V+++ + + +K +
Sbjct: 480 KNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSS 539
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K R + +S ++ Y + L +M+EAGYVP+T VLHD+DEE K AL
Sbjct: 540 VELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALH 599
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+ L+++ P + +IKNLR+C DCH AIK+++KI RE+IVRD +RFHHF+
Sbjct: 600 IHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFK 659
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 660 DGSCSCGDYW 669
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQL 189
S+ + CG S+ H L+ + D + N +++ Y K L ARKVFD +
Sbjct: 203 SARIPDCGITSSL------HALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM 256
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKE 247
K ++ SW+ MI+ YA NG AD L L+ +M + T + ACA A ++
Sbjct: 257 EK-DVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQT 315
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G ++ ++++ G+ + +++ + G + A + +++ E + W A+
Sbjct: 316 GKCIHNQVVR--MGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIK-EKNILSWSAMITG 372
Query: 307 AQIHG 311
+HG
Sbjct: 373 YGMHG 377
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 147 GKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G+++H L +R+ F D + L+ MY C ARK FD++ N M SGY
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 206 ANGQGADGLMLFEQMRKTGPHP--DKETFLVVFAACA 240
N L LF ++ +G D+ LV F+A A
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASA 204
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 230/406 (56%), Gaps = 28/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELL 154
S + +L + G+ EA+ Y Q + + D F+ S++ + L K +H ++
Sbjct: 405 SWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ K+V + L++MY KC +AR +FD + +R++++W+ MI GY +G G L
Sbjct: 465 MRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAAL 524
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LFE+M+K P+ TFL V +AC+ + V+ G F +MK +Y I P ++HY A++ +
Sbjct: 525 ELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDL 584
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------ 328
LG AG L EA +F+ +MP +P V V+ A+ QIH +V ++ E L +L+P
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYH 644
Query: 329 --------SKAIVDKIPL-------PPRKKQSATNMLEEKNRVSDYRSTDLY----RGEY 369
+ ++ +K+ +K +M+E KN V + S + Y
Sbjct: 645 VLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIY 704
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
++ L Q++EAGYVPDT +L ++++ KE+ L HSE+LAI++GL++T + +
Sbjct: 705 AFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVR 763
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+C DCHNA K +S + GRE+IVRD +RFHHF++G CSCGDYW
Sbjct: 764 KNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C +L +E G+ +H+L ++V + N LI MY KC A +F +L+ R +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFE 253
SW+ MI G+A NG+ + L F QM+ PD T++ V A A +++
Sbjct: 404 VSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+M+N + + A++ + G ++ A + M E V W A+ + HG
Sbjct: 464 VMRN--CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG 518
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ LL CG+ + +GK +H LL S F D+ L MY KC ARKVFD++
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP 197
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+L SW+ +++GY+ NG L + M + P T + V A ++ ++ G
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIG 255
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G R A+E + + + + S+L + L+ I +GK +H + F V
Sbjct: 213 QNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN 272
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L++MY KC + + AR +FD + +RN+ SW+ MI Y N + +++F++M G
Sbjct: 273 IATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG 332
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
P + + ACA ++ G
Sbjct: 333 VKPTDVSVMGALHACADLGDLERG 356
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 212/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L + + ++ +GK +H+ + DV + +I+MY KC ARK FD+++
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N+ SW MI+GY +G A L LF M +G P+ TF+ V AAC+ A EG+
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F MK +G+ PG+EHY ++ +LG AG L +A + ++RM +P +W +L +IH
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPRK----KQSATNM 349
+VEL + + L +LD S V+++ + + K ++
Sbjct: 470 KNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSL 529
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
LE V + D + YE + LN ++ EAGYV +T V HD+DEE KE L+
Sbjct: 530 LELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLR 589
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+G+++T P + ++KNLR+C DCHN IK++SKIV RE +VRD KRFHHF+
Sbjct: 590 VHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFK 649
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 650 DGGCSCGDYW 659
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +C +L I GK+ H+ + D+ +++ LI MY C ARKVFD++
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL------VVFAACAS--A 242
KRN+ SW MI GY NG D + LF+ + D FL V +AC+ A
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 243 EAVKEGFLYFEIMKN-DYGIVPG 264
+ + E F I + D G+ G
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVG 221
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC--NTRLARKVFDQLR 190
S++ +C + + + + +H + F + V + N L++ Y K +ARK+FDQ+
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP-DKETFLVVFAACASAEAVKEGF 249
++ S++ ++S YA +G + +F ++ K + T V A + + A++ G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+D I G+E + +II + G + A + +RM V W A+
Sbjct: 308 CI-----HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIA 361
Query: 306 FAQIHG 311
+HG
Sbjct: 362 GYGMHG 367
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K ++ SW+ +I+ A +G A+ L+ F MRK +P + +F AC+S + G
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG-- 95
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ V G + I A+I + + G L +A + + +P V +R +
Sbjct: 96 ---KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 225/397 (56%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G +EA+E ++ QD F SLL +C + +I +G VHE + + F +V
Sbjct: 196 QNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVV 255
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L+ MY +C N AR+VFD + ++N+ +W MISGY +G G+ + LF +M G
Sbjct: 256 LGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDG 315
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P P+ TF+ V +ACA A V EG F MK +YG+VP +EH + ++ +LG AGHL EA
Sbjct: 316 PRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEA 375
Query: 285 EEFVERM-PFEPTVEVWEALRNFAQIHGDVELE-DRAEELL------------------- 323
+F++ P EP VW A+ ++H + +L + AE LL
Sbjct: 376 YQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYAL 435
Query: 324 -GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
G +D + I + + KK+ + ++ ++V + D + Y + L +
Sbjct: 436 AGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSR 495
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
REAGY+P + V+H+++EE +E AL+YHSE+LAIA+GL+ T + +RI+KNLR+C DC
Sbjct: 496 CREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDC 555
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H AIK +S I RE+ VRD RFHHF+DG CSC DYW
Sbjct: 556 HTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
A+ S+ FS+++ S +L + +G+ +H + + D + L+ Y K + +
Sbjct: 112 ANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMI 171
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
ARKVFD++ ++ + +W+ MISGY NG G + + LF M+ G PD TF+ + +ACA
Sbjct: 172 ARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQ 231
Query: 242 AEAVKEGFLYFE-IMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
A+ GF E I +N D +V G A++ + G++ +A E + M E +
Sbjct: 232 VGAIGLGFWVHEYIARNCFDLNVVLG----TALMNMYSRCGNVSKAREVFDSME-EKNIV 286
Query: 299 VWEALRNFAQIHG 311
W A+ + +HG
Sbjct: 287 AWTAMISGYGMHG 299
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 200/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F+ D N L+ Y KC + A F L
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 473
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + SW MI G A +G G L LF +M G +P+ T V AC A V E
Sbjct: 474 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI EHY +I +LG AG L +A E V MPF+ VW AL +++
Sbjct: 534 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 593
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H D EL A E L L+P K A V K+ KK+ A +
Sbjct: 594 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 653
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + +S + + Y K+ L M +AGY+P+ LHD+D KE L
Sbjct: 654 WVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLL 713
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ L+STPP P+R+ KNLRIC DCH A K +S IV RE+I+RD RFHHF
Sbjct: 714 SHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHF 773
Query: 465 RDGKCSCGDYW 475
RDG CSCGDYW
Sbjct: 774 RDGTCSCGDYW 784
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C ++I+ G++VH ++ + KDV N L++MY K +A +F+++
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 171
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW+ +ISG NG + L QM+ +G P+ + ACA A A G
Sbjct: 172 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISG 203
++G +VH + + F DV + N L+ MYG AR+VFD+ +RN SW+ ++S
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
Y N Q D + +F +M +G P + F V AC + + G M G
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG-RQVHAMVVRMGYEK 142
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ A++ + G + A E+MP + V W AL + ++G + RA ELL
Sbjct: 143 DVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELL 198
Query: 324 GDLDPSKAIVDKIPLPPRKKQSA 346
+ S + + L K A
Sbjct: 199 LQMKSSGLVPNVFMLSSILKACA 221
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 102 LLSLCK-EGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSA 158
L+S C G AIE + Q S+ +VF SS+L +C + ++G+++H + +
Sbjct: 181 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 240
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
D + L++MY K A KVFD + R+L W+ +ISG + G+ + +F
Sbjct: 241 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFY 300
Query: 219 QMRKTGPHPDKETFLVVFAACASAEA 244
+RK G ++ T V + AS EA
Sbjct: 301 GLRKEGLGVNRTTLAAVLKSTASLEA 326
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L S +L++ ++VH L F+ D + N LI+ Y KC A +VF++
Sbjct: 314 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 373
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ + MI+ + G + LF +M + G PD + ACAS A ++G
Sbjct: 374 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 433
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++K + + A++ G + +AE +P E V W A+
Sbjct: 434 VHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQ 490
Query: 310 HGDVELEDRAEELLG 324
HG + RA EL G
Sbjct: 491 HGHGK---RALELFG 502
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 217/372 (58%), Gaps = 28/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+++L C +L ++ GK++H S + ++N +I MY + + AR++FDQ+
Sbjct: 328 LAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVC 387
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RK ++ W MI A +GQG + + LFE+M + G PD+ T++ V +AC+ A V EG
Sbjct: 388 WRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 446
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
Y++ +KN++ I P + HY ++ +L AG EA+EF+ RMP EP W +L + +
Sbjct: 447 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACR 506
Query: 309 IHGDVELEDRAEELLGDLDPS-----KAIVDKIPLPPR----------------KKQSAT 347
+H + EL + A E L +DP+ AI + R +K++
Sbjct: 507 VHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGF 566
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKA 403
+ ++++ + + D+ + + + + +M E AG+VPD + VLHD+D+E KE+
Sbjct: 567 SWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEEL 626
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GLISTP + LR++KNLR+C DCH AIK +SK+ RE+IVRD RFHH
Sbjct: 627 LSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHH 686
Query: 464 FRDGKCSCGDYW 475
FRDG CSC DYW
Sbjct: 687 FRDGLCSCKDYW 698
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 33/151 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ-- 188
+S+L +C NL ++ +GK+VH + + + ++ N LI Y K + AR++ DQ
Sbjct: 194 ITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSM 253
Query: 189 -------------------------------LRKRNLSSWHLMISGYAANGQGADGLMLF 217
+ R++ +W MI GY NG+ + + LF
Sbjct: 254 ETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF 313
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
M GP P+ T V + CAS + G
Sbjct: 314 RSMITCGPEPNSYTLAAVLSVCASLACLDYG 344
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S V ++ L + G+ EAI+ M D + +++L SC ++ +G++VH
Sbjct: 25 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF-TLTNVLSSCAVTQAGAVGRKVHSF 83
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW--------HL------ 199
+ V + N ++ MYGKC ++ A VF+++ R++SSW HL
Sbjct: 84 VVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 143
Query: 200 -----------------MISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS 241
MI+GY NG A L LF +M ++ PD+ T V +ACA+
Sbjct: 144 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 203
Query: 242 AEAVKEG 248
V+ G
Sbjct: 204 LGNVRIG 210
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 230/414 (55%), Gaps = 34/414 (8%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKR 149
N L S + +L + G V EA+ + S + D F+ S++ + L K
Sbjct: 295 NKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKW 354
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H L+ K+V + L++MY KC ARK+FD + R++ +W+ MI GY +G
Sbjct: 355 IHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGL 414
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
G + LF++M+K P+ TFL +AC+ + V+EG +FE MK DYGI P ++HY
Sbjct: 415 GKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYG 474
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS 329
A++ +LG AG L +A +F+++MP +P + V+ A+ +IH +V+L ++A + L+P
Sbjct: 475 AMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPD 534
Query: 330 ------------------------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLY 365
+ I++K L +K +++E N V + S
Sbjct: 535 DGGYHVLLANIYATASMWGKVAKVRTIMEKSGL---QKTPGCSLVEIGNEVHSFYSGTTS 591
Query: 366 RGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTP 421
+ Y ++ L ++R AGYVPDT + HD++++ K + L HSE+LAIA+GL++T
Sbjct: 592 HPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTS 650
Query: 422 PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+ I KNLR+CGDCHNA K +S + GRE+IVRD RFH F+DG CSCGDYW
Sbjct: 651 TGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 89 LRGNAQLESLD--VNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
L+G A+ SLD ++ S K VR + Y+ F+ LL CG+ ++
Sbjct: 2 LKGYAKSSSLDSALSFFSRMKHDSVRPVV------------YN-FTYLLKLCGDNSDLKR 48
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H + TS F ++ ++ MY KC A +FD++ +R+L W+ MISGYA
Sbjct: 49 GKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQ 108
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
NG LML +M + G PD T + + A A ++ G + + Y + G E
Sbjct: 109 NGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG-----MAVHGYVLRAGFE 163
Query: 267 HYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A++ + G + A + M TV W ++ + GD E
Sbjct: 164 SLVNVSTALVDMYSKCGSVSIARVIFDGMDHR-TVVSWNSMIDGYVQSGDAE 214
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C +L +E GK VH+L+ DV + N LI MY KC +A +F LR + L
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
SW+ MI GYA NG + L F +M+ PD T + V A A
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALA 344
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L + + + + +G VH + + F V ++ L++MY KC + +AR +FD + R
Sbjct: 136 SILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHR 195
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ SW+ MI GY +G +++F++M G P T + ACA ++ G
Sbjct: 196 TVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERG 251
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 217/373 (58%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+++L C +L ++ GK++H S + ++N +I MY + + AR++FDQ+
Sbjct: 433 TLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQV 492
Query: 190 --RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
RK ++ W MI A +GQG + + LFE+M + G PD+ T++ V +AC+ A V E
Sbjct: 493 CWRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNE 551
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G Y++ +KN++ I P + HY ++ +L AG EA+EF+ RMP EP W +L +
Sbjct: 552 GKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSAC 611
Query: 308 QIHGDVELEDRAEELLGDLDPS-----KAIVDKIPLPPR----------------KKQSA 346
++H + EL + A E L +DP+ AI + R +K++
Sbjct: 612 RVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETG 671
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEK 402
+ ++++ + + D+ + + + + +M E AG+VPD + VLHD+D+E KE+
Sbjct: 672 FSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEE 731
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSE+LAIA+GLISTP + LR++KNLR+C DCH AIK +SK+ RE+IVRD RFH
Sbjct: 732 LLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFH 791
Query: 463 HFRDGKCSCGDYW 475
HFRDG CSC DYW
Sbjct: 792 HFRDGLCSCKDYW 804
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 33/152 (21%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ- 188
+S+L +C NL ++ +GK+VH + + + ++ N LI Y K + AR++ DQ
Sbjct: 299 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 358
Query: 189 --------------------------------LRKRNLSSWHLMISGYAANGQGADGLML 216
+ R++ +W MI GY NG+ + + L
Sbjct: 359 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDL 418
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
F M GP P+ T V + CAS + G
Sbjct: 419 FRSMITCGPEPNSYTLAAVLSVCASLACLDYG 450
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S V ++ L + G+ EAI+ M D + +++L SC ++ +G++VH
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF-TLTNVLSSCAVTQAGAVGRKVHSF 189
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW--------HL------ 199
+ V + N ++ MYGKC + A VF+++ R++SSW HL
Sbjct: 190 VVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 249
Query: 200 -----------------MISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS 241
MI+GY NG A L LF +M ++ PD+ T V +ACA+
Sbjct: 250 ESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 309
Query: 242 AEAVKEG 248
V+ G
Sbjct: 310 LGNVRIG 316
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN----TRLARK 184
D ++ LL C + G+ +H + + L N L+ YG+ R AR+
Sbjct: 27 DHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARR 86
Query: 185 VFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQ----------------------- 219
+FD+ L +RN+ +W+ ++S +A +G+ AD +F +
Sbjct: 87 LFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146
Query: 220 --------MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA 270
M G P + T V ++CA +A G ++ ++K G + + +
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVAN--S 204
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK 330
++ + G G A ERMP +V W A+ + G ++L AE L + P +
Sbjct: 205 VLNMYGKCGDAETASTVFERMPVR-SVSSWNAMVSLNTHLGRMDL---AESLFESM-PGR 259
Query: 331 AIV 333
+IV
Sbjct: 260 SIV 262
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 223/396 (56%), Gaps = 28/396 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G REAI+ + + D S S + +C + S+E + ++E + S + DV
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+++ LI+M+ KC + AR VFD+ R++ W MI GY +G+ + + L+ M + G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
HP+ TFL + AC + V+EG+ +F M D+ I P +HY +I +LG AGHL +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
E ++ MP +P V VW AL + + H VEL + A + L +DPS
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 332 -IVDKIP-LPPRKKQSATN------MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQM 379
+ D++ + R K+ N +E + R+ +R D YE +++ + ++
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRL 598
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E G+V + LHD+++E E+ L HSER+AIAYGLISTP PLRI KNLR C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCH 658
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K++SK+V RE++VRD RFHHF+DG CSCGDYW
Sbjct: 659 AATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 14/279 (5%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A S F LL +C L ++MG+ VH + F DV + N LI +Y KC
Sbjct: 111 QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 180 RLARKVFD--QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
AR VF+ L +R + SW ++S YA NG+ + L +F QMRK PD + V
Sbjct: 171 GSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 238 ACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
A + +K+G ++ ++K I P + I++ + G + A+ ++M P
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPN 287
Query: 297 VEVWEAL-RNFAQIHGDVELEDRAEELLG-DLDPSKAIVDKIPLPPRKKQSA-TNMLEEK 353
+ +W A+ +A+ E D E++ D+ P D I + A LE+
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRP-----DTISITSAISACAQVGSLEQA 342
Query: 354 NRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVL 392
+ +Y YR + L + G V R V
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+E Q + S+L++ L+ ++ G+ +H + + +
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L MY KC A+ +FD+++ NL W+ MISGYA NG + + +F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFE-IMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD + +ACA ++++ +E + ++DY I A+I + G +E
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS--ALIDMFAKCGS-VE 375
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
V + V VW A+ +HG
Sbjct: 376 GARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL+DS + + K++H L L KLI + AR+VFD L
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ + W+ +I GY+ N D L+++ M+ PD TF + AC+ ++ G F
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 250 LYFEIMK----NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++ + D + G+ A + LGSA + E ER T+ W A+
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER-----TIVSWTAI 193
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 212/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L + + ++ +GK +H+ + DV + +I+MY KC ARK FD+++
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N+ SW MI+GY +G A L LF M +G P+ TF+ V AAC+ A EG+
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F MK +G+ PG+EHY ++ +LG AG L +A + ++RM +P +W +L +IH
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPRK----KQSATNM 349
+VEL + + L +LD S V+++ + + K ++
Sbjct: 470 KNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSL 529
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
LE V + D + YE + LN ++ EAGYV +T V HD+DEE KE L+
Sbjct: 530 LELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLR 589
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+G+++T P + ++KNLR+C DCHN IK++SKIV RE +VRD KRFHHF+
Sbjct: 590 VHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFK 649
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 650 DGGCSCGDYW 659
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +C +L I GK+ H+ + D+ +++ LI MY C ARKVFD++
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL------VVFAACAS--A 242
KR++ SW MI GY NG D + LF+ + D FL V +AC+ A
Sbjct: 139 KRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 243 EAVKEGFLYFEIMKN-DYGIVPG 264
+ + E F I + D G+ G
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVG 221
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC--NTRLARKVFDQLR 190
S++ +C + + + + +H + F + V + N L++ Y K +ARK+FDQ+
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP-DKETFLVVFAACASAEAVKEGF 249
++ S++ ++S YA +G + +F ++ K + T V A + + A++ G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+D I G+E + +II + G + A + +RM V W A+
Sbjct: 308 CI-----HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIA 361
Query: 306 FAQIHG 311
+HG
Sbjct: 362 GYGMHG 367
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K ++ SW+ +I+ A +G A+ L+ F MRK +P + +F AC+S + G
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG-- 95
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ V G + I A+I + + G L +A + + +P V +R +
Sbjct: 96 ---KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGY 152
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 217/392 (55%), Gaps = 26/392 (6%)
Query: 110 KVREAIEYMGQDASASAGYDV-FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
K E + M +A S V ++L +C L ++E GK +H + + + N
Sbjct: 267 KALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNA 326
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI MYG+C + ++VFD ++ R++ SW+ +IS Y +G G + +FE M G P
Sbjct: 327 LITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
+F+ V AC+ A V+EG + FE M + Y I PG+EHY ++ +LG A L EA + +
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 446
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------------- 328
E M FEP VW +L +IH +VEL +RA LL +L+P
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWS 506
Query: 329 -SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAG 383
+K+++ + +K + +E K +V + S D + + E++ L+ +M+ G
Sbjct: 507 EAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQG 566
Query: 384 YVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIK 443
YVP T VL+D+DEE KE+ + HSE+LA+A+GLI+T +RI KNLR+C DCH K
Sbjct: 567 YVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTK 626
Query: 444 IMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+SK RE++VRD RFHHF+DG CSCGDYW
Sbjct: 627 FISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLCK G +++AI + + + + F L+ SC S+ G VH L +S F +D
Sbjct: 56 SLCKGGNLKQAIHLLCCEPNPTQ--RTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDP 113
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI MY + + ARKVFD+ R+R + W+ + A G G + L L+ QM
Sbjct: 114 FLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWI 173
Query: 224 GPHPDKETFLVVFAACASAE 243
G D+ T+ V AC +E
Sbjct: 174 GIPSDRFTYTFVLKACVVSE 193
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
++ GK +H + + ++ + L+++Y K + A VF + +N SW MI+
Sbjct: 199 LQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIAC 258
Query: 204 YAANGQGADGLMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKEGFLY--FEIMKNDY 259
+A N L LF+ M P+ T + V ACA A+++G L + + +
Sbjct: 259 FAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLD 318
Query: 260 GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I+P + A+I + G G ++ + + M V W +L + +HG
Sbjct: 319 SILPVLN---ALITMYGRCGEILMGQRVFDNMKNRDVVS-WNSLISIYGMHG 366
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 227/415 (54%), Gaps = 33/415 (7%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYM------GQDASASAGYDVFSSLLDSCGNLKSIE 145
N + S + + + G EAIE G + SA+ G + S+L +C ++
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQG--TWVSVLPACSQAGALR 469
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G ++H L + DV + L +MYGKC A +F Q+ + N W+ +I+ +
Sbjct: 470 QGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHG 529
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
+G G +MLF++M G PD TF+ + +AC+ + V EG FE+M+ DYGI P +
Sbjct: 530 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSL 589
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
+HY ++ + G AG L A F++ MP +P +W AL + ++HG+V+L A E L +
Sbjct: 590 KHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 649
Query: 326 LDPSKAI-----------------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTD- 363
++P VD+I +K + +E N+V + + +
Sbjct: 650 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQ 709
Query: 364 ---LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIST 420
+Y Y ++ L+ +++ GYVPD R+VL D++++ KE L HSERLA+A+ LI+T
Sbjct: 710 THPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITT 769
Query: 421 PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P + +RI KNLR+CGDCH+ K +SKI RE+IVRD+ RFHHF++G CSCGDYW
Sbjct: 770 PAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 106 CKEGKVREAIEYMGQ-----DASASAGYDVFS------------SLLDSCGNLKSIEMGK 148
CK G+ ++ +G ASA+A D + +L C NL+S K
Sbjct: 15 CKGGRFTRVLQSVGAVVREFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQS---AK 71
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H L S +++V ++ KL+ +Y N LAR FD + R++ +W+LMISGY G
Sbjct: 72 CLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAG 131
Query: 209 QGADGLMLFEQ-MRKTGPHPDKETFLVVFAACASAE--------AVKEGFLY 251
++ + F M +G PD TF V AC + A+K GF++
Sbjct: 132 YSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFMW 183
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
LR F++D+ + N ++ MY K AR VF+ L +++ SW+ +ISGYA NG ++
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEA 434
Query: 214 LMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA 270
+ ++ M + G ++ T++ V AC+ A A+++G L+ ++KN G+ + +
Sbjct: 435 IEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVGTS 492
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ + G G L +A ++P +V W L HG E
Sbjct: 493 LADMYGKCGRLDDALSLFYQIPRVNSVP-WNTLIACHGFHGHGE 535
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y F S+L +C N+ G ++H L F+ DV + LI +Y + AR +FD
Sbjct: 153 YRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFD 209
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ R++ SW+ MISGY +G + L L + +R D T + + +AC A
Sbjct: 210 EMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNR 265
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERM 291
G + + Y I G+E + + I + G L + ++ +RM
Sbjct: 266 G-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRM 308
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
C+ G +EA+ D + SLL +C G +H ++ +
Sbjct: 227 CQSGNAKEALTL--SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+NKLI++Y + + + +KVFD++ R+L SW+ +I Y N Q ++LF++MR +
Sbjct: 285 SNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRI 344
Query: 226 HPDKETFL 233
PD T +
Sbjct: 345 QPDCLTLI 352
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ +L++C + + +GK VH + + + + L+ MY KC NTR+AR+VF+++
Sbjct: 323 TFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEM 382
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +L SW +I GYA NGQ + L FE + ++G PD+ T++ V +AC A V +G
Sbjct: 383 HQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGL 442
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +K +G++ +HY +I +L +G EAE ++ MP +P +W +L +I
Sbjct: 443 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRI 502
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLP--------------PRK--------KQSAT 347
HG++EL RA + L +++P I L RK K+
Sbjct: 503 HGNLELAKRAAKALYEIEPENPAT-YITLANIYANAGLWSEVANVRKDMDNMGIVKKPGK 561
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K +V + D + +E + L+ +++E GYVPDT +VLHD++EE KE+
Sbjct: 562 SWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQN 621
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LA+ +G+ISTPP P+++ KNLR C DCH AIK +SKIV R++ VRD+ RFH
Sbjct: 622 LVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHC 681
Query: 464 FRDGKCSCGDYW 475
F DG CSC DYW
Sbjct: 682 FEDGSCSCKDYW 693
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 93/162 (57%), Gaps = 11/162 (6%)
Query: 96 ESLDVNLLSLCKEGKVREAIEYMGQ-DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
E++DV LC++ +V+EA+E + + D SA V+S+L+ +C +++E+G+RVH
Sbjct: 60 EAVDV----LCQQKRVKEAVELLHRTDHRPSA--RVYSTLIAACVRHRALELGRRVHAHT 113
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ S FV V ++N+L++MY KC + A+ +FD++ R+L SW+ MI GYA G+
Sbjct: 114 KASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQAR 173
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
LF++M P D ++ + + +E F +M+
Sbjct: 174 KLFDEM----PQRDNFSWNAAISGYVTHNQPREALELFRVMQ 211
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
+ + +GK +H L + D + + L+++YGKC + AR +FDQ++ R++ SW M
Sbjct: 233 IPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTM 292
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
I +G+ +G +LF + ++G P++ TF V ACA A G M + G
Sbjct: 293 IHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA-G 351
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
PG A++ + G+ A M +P + W +L
Sbjct: 352 YDPGSFAISALVHMYSKCGNTRVARRVFNEM-HQPDLVSWTSL 393
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E GK +H + + + D + N L+++Y KC LAR +FD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++L SW +MI+GY +G G + + F +MR G PD+ +F+ + AC+ + +++G+
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F IMKND+ I P +EHY ++ +L G+L +A +F+E +P P +W AL +I
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 613
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ D+EL ++ E + +L+P K + +KI +K +
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCS 673
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK-----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K RV+ + S + + K +K + +M+E GY P T+Y L + DE KE A
Sbjct: 674 WIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMA 733
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GL++ PPR +R+ KNLR+CGDCH K MSK RE+++RD+ RFHH
Sbjct: 734 LCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHH 793
Query: 464 FRDGKCSCGDYW 475
F+DG CSC +W
Sbjct: 794 FKDGYCSCRGFW 805
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+ + + Y+G D + S+L C N ++ +GK VH L S+F + + +N L+
Sbjct: 238 IYKQMMYLGIDVDLAT----IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC + A +VF+++ +RN+ SW MI+GY +G ++L +QM K G D
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVV 353
Query: 231 TFLVVFAACASAEAVKEG 248
+ ACA + ++ G
Sbjct: 354 AITSILHACARSGSLDNG 371
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
Q+ + +L C+ G + A+E + + + S+L C LKS+ GK+VH +
Sbjct: 65 QVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSI 124
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+++++ D L KL+ Y C + + R+VFD + K+N+ W+ M+S YA G +
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 214 LMLFEQMRKTG-----PHPDKETF 232
+ LF+ M + G P E F
Sbjct: 185 ICLFKIMVEKGIEGKRPESASELF 208
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 227/404 (56%), Gaps = 30/404 (7%)
Query: 102 LLSLC-KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSA 158
L++C + G A+EY + + + +D F+ S+L +CG L S+E+G+ +++ R
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE 240
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
++ + N ++M+ KC NT AR +F+++++RN+ SW MI GYA NG + L LF
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFT 300
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM--KNDYGIVPGIEHYIAIIKVLG 276
M+ G P+ TFL V +AC+ A V EG YF +M ND + P EHY ++ +LG
Sbjct: 301 TMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----- 331
+G L EA EF+++MP EP +W AL +H D+ L + ++L + P
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420
Query: 332 ------------IVDKIPLPPRK----KQSATNMLEEKNRVSDYRSTD----LYRGEYEK 371
VDK+ RK K +A + +E + ++ + D + YEK
Sbjct: 421 LSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEK 480
Query: 372 MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKN 431
+ + ++R+ GYVPDT V HD++ E KE +L +HSE+LAIA+GLI P P+R++KN
Sbjct: 481 LDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKN 540
Query: 432 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LR C DCH K +S + E+I+RD RFHHFR+G CSC ++W
Sbjct: 541 LRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 47/275 (17%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K++H ++ + F + L +L+E + AR+VFD++ K + W+ + GY N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIE 266
+ L+L+++MR G PD+ T+ V A + GF L+ ++K +G + +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE--------------ALRNFAQIHGD 312
+ ++ + G L AE E M + V W AL F ++ D
Sbjct: 148 TELVMMYM--KFGELSSAEFLFESMQVKDLV-AWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 313 VELEDRAEEL--------LGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR---S 361
D + LG L+ + I D+ RK++ N++ E R+ + +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDR----ARKEEIDCNIIVENARLDMHLKCGN 260
Query: 362 TDLYRGEYEKMK--------------GLNGQMREA 382
T+ R +E+MK +NG REA
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREA 295
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 217/373 (58%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+++L C +L ++ GK++H S + ++N +I MY + + AR++FDQ+
Sbjct: 433 TLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQV 492
Query: 190 --RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
RK ++ W MI A +GQG + + LFE+M + G PD+ T++ V +AC+ A V E
Sbjct: 493 CWRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNE 551
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G Y++ +KN++ I P + HY ++ +L AG EA+EF+ RMP EP W +L +
Sbjct: 552 GKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSAC 611
Query: 308 QIHGDVELEDRAEELLGDLDPS-----KAIVDKIPLPPR----------------KKQSA 346
++H + EL + A E L +DP+ AI + R +K++
Sbjct: 612 RVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETG 671
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEK 402
+ ++++ + + D+ + + + + +M E AG+VPD + VLHD+D+E KE+
Sbjct: 672 FSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEE 731
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSE+LAIA+GLISTP + LR++KNLR+C DCH AIK +SK+ RE+IVRD RFH
Sbjct: 732 LLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFH 791
Query: 463 HFRDGKCSCGDYW 475
HFRDG CSC DYW
Sbjct: 792 HFRDGLCSCKDYW 804
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 33/152 (21%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ- 188
+S+L +C NL ++ +GK+VH + + + ++ N LI Y K + AR++ DQ
Sbjct: 299 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 358
Query: 189 --------------------------------LRKRNLSSWHLMISGYAANGQGADGLML 216
+ R++ +W MI GY NG+ + + L
Sbjct: 359 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDL 418
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
F M GP P+ T V + CAS + G
Sbjct: 419 FRSMITCGPEPNSYTLAAVLSVCASLACLDYG 450
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S V ++ L + G+ EAI+ M D + +++L SC ++ +G++VH
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF-TLTNVLSSCAVTQAGAVGRKVHSF 189
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW--------HL------ 199
+ V + N ++ MYGKC ++ A VF+++ R++SSW HL
Sbjct: 190 VVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 249
Query: 200 -----------------MISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS 241
MI+GY NG A L LF +M ++ PD+ T V +ACA+
Sbjct: 250 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 309
Query: 242 AEAVKEG 248
V+ G
Sbjct: 310 LGNVRIG 316
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN----TRLARK 184
D ++ LL C + G+ +H + + L N L+ YG+ R AR+
Sbjct: 27 DHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARR 86
Query: 185 VFDQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQ----------------------- 219
+FD+ L +RN+ +W+ ++S +A +G+ AD +F +
Sbjct: 87 LFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146
Query: 220 --------MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA 270
M G P + T V ++CA +A G ++ ++K G + + +
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVAN--S 204
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK 330
++ + G G A ERMP +V W A+ + G ++L AE L + P +
Sbjct: 205 VLNMYGKCGDSETATTVFERMPVR-SVSSWNAMVSLNTHLGRMDL---AESLFESM-PDR 259
Query: 331 AIV 333
+IV
Sbjct: 260 SIV 262
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 215/390 (55%), Gaps = 27/390 (6%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G EA++ G+ + D FS L + NL +E G+++H L+ F D+ +
Sbjct: 681 GCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVT 740
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++MYGKC K+ Q R+ SW+++IS +A +G F +M K GP
Sbjct: 741 NAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 800
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD TF+ + +AC V EG Y++ M ++G+ PGIEH + II +LG +G L AE
Sbjct: 801 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEG 860
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----------------- 329
F++ MP P W +L +IHG++EL + E L +LDPS
Sbjct: 861 FIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 920
Query: 330 ----KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----RE 381
+ + ++ KKQ A + ++ K++V + + Y + ++ G++ +E
Sbjct: 921 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 980
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGYVPDT + LHD+DEE KE L HSERLA+A+GLI+TP LRI KNLR+CGDCH+
Sbjct: 981 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1040
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
K +S IVGR++++RD RFHHF GKCSC
Sbjct: 1041 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H + + N LI MY K N AR VFD++R RN +SW M+SGY
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGF-LYFEIMKNDYGIVPG 264
G + + LF QM G P+ + AC+ S EGF ++ ++K GI+
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT--GILGD 230
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ A++ GS G + A++ E MP + V W +L
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSL 268
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+++ G+ +H L+ +V + N L+ +Y + + A VF + +R+L SW+ M++
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
Y +G+ DGL + ++ + G + TF AAC++ E + E + ++ IV
Sbjct: 473 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALI-----IV 527
Query: 263 PGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ A++ + G G ++EA++ ++ MP +P W AL
Sbjct: 528 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNAL 571
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 126 AGYDVFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
A Y S+L +C + + G +H + + F D + N LI MY KC + +
Sbjct: 598 ANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNY 657
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+FD L ++ +W+ M++ A +G G + L +F +MR G + D+ +F AA A+
Sbjct: 658 IFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV 717
Query: 245 VKEG 248
++EG
Sbjct: 718 LEEG 721
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 132 SSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SL+ +C + + G +VH + + + DV + L+ YG A+K+F+++
Sbjct: 199 ASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 258
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ SW ++ GY+ +G + L ++++MR+ G ++ TF V ++C E + L
Sbjct: 259 DHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE---DQVL 315
Query: 251 YFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++++ + YG + ++I + S + EA + M E + W A+ +
Sbjct: 316 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYA 374
Query: 309 IHG 311
HG
Sbjct: 375 HHG 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G+V + M Q+ S + F+++ SCG L+ +G +V + F V + N
Sbjct: 279 GEVLNVYQRMRQEG-VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANS 337
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
LI M+ + A VFD + + ++ SW+ MIS YA +G + L F MR
Sbjct: 338 LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 390
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L +C N + + K VH L+ + F + + N L+ MYGK A+KV +
Sbjct: 501 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 560
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+ + +W+ +I G+A N + + + ++ +R+ G + T + V AC++ +
Sbjct: 561 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPD 614
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 225/401 (56%), Gaps = 28/401 (6%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L + G V+EA+ S D F+ ++ + + K +H L +
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+V ++ L++MY KC + ARK+FD +++R++ +W+ MI GY +G G + L LF +
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M+K P+ TFL V +AC+ + V+EG L F+ M+ DY + P ++HY A++ +LG AG
Sbjct: 539 MQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAG 598
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----------- 328
L +A F++ MP +P + V A+ +IH +VEL ++A + L LDP
Sbjct: 599 QLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLAN 658
Query: 329 ---SKAIVDKIPL-------PPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKG 374
S ++ DK+ K + +E +N + + S E Y ++
Sbjct: 659 IYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLET 718
Query: 375 LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
L +++ AGYVPD + HD++E+ K++ L HSERLAIA+GL++T P L I KNLR+
Sbjct: 719 LGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRV 777
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CGDCH+ K +S + GRE+IVRD +RFHHF++G CSCGDYW
Sbjct: 778 CGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G + A++ + Q A D S+L + ++K++ +G+ +H S F V
Sbjct: 223 QNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVN 282
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MY KC + R+AR VF +R + + SW+ MI G A NG+ + F +M G
Sbjct: 283 VTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEG 342
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
P + T + V ACA+ ++ G+ +++
Sbjct: 343 EVPTRVTMMGVLLACANLGDLERGWFVHKLL 373
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ LL CG ++ G+ +H L+ T+ F ++ + ++ +Y KC A K+F++++
Sbjct: 148 YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ 207
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++L SW +++GYA NG L L QM++ G PD T + + A A +A++ G
Sbjct: 208 HKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIG 265
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 76 KTGTGHSQNTN-DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSL 134
++ T S NT D N + E L + EG+V + MG +
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG--------------V 353
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C NL +E G VH+LL +V + N LI MY KC +A +F+ L K N+
Sbjct: 354 LLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV 413
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE-----GF 249
+W+ MI GYA NG + L LF M+ G D T + V A A ++ G
Sbjct: 414 -TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGL 472
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
M N+ + A++ + G + A + + M E V W A+ +
Sbjct: 473 AVRACMDNNVFVST------ALVDMYAKCGAIKTARKLFDMMQ-ERHVITWNAMIDGYGT 525
Query: 310 HG 311
HG
Sbjct: 526 HG 527
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 209/383 (54%), Gaps = 25/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++A+ SS+L C NL ++ GK++H+ +++ + L+ MY KC
Sbjct: 280 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCG 339
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A K+F ++ R++ +W+ MISGYA +G G + + LFE+M+ G P+ TF+ V
Sbjct: 340 DLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 399
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC G FE M+ YGI P ++HY ++ +L AG L A + + MPFEP
Sbjct: 400 ACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHP 459
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV--------------DKIPLPPRK- 342
+ L +++ ++E + A L + DP A D + R
Sbjct: 460 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWM 519
Query: 343 ------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVL 392
K + +E K + ++RS D + +EK+ L +M+ GYVPD +VL
Sbjct: 520 KDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVL 579
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+DE K + L HSE+LAI++GLIST P M LRI KNLR+CGDCHNA K++SKI RE
Sbjct: 580 HDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDRE 639
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+I+RD RFHHFR G CSCGDYW
Sbjct: 640 IILRDTTRFHHFRGGHCSCGDYW 662
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 97 SLDVNLLSLCKEGKVREA-IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLR 155
S + + L K G V EA ++ S ++ S ++ + E E R
Sbjct: 162 SWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAE------EWFR 215
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ D L ++ Y N A + F+ + RNL SW+ +++GY N D L
Sbjct: 216 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 275
Query: 216 LFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
LF M R+ P+ T V C++ A+ G
Sbjct: 276 LFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 309
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 214/374 (57%), Gaps = 29/374 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++ +C NL S GK++H L L++ + ++N LI MY KC N + AR++FD++
Sbjct: 346 FVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N S + MI+GYA +G + L LF+ M + P TF+ V +ACA V+EG+
Sbjct: 406 AEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGW 465
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK + I P EHY +I +LG AG L EAE + RMPF P W +L +
Sbjct: 466 NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRT 525
Query: 310 HGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATN 348
HG++EL +A + L+PS A V + R KK+ +
Sbjct: 526 HGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCS 585
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE---AKE 401
+E K R+ + + D + + YE ++ ++G+M+ AGYVPD R+ L D KE
Sbjct: 586 WIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKE 645
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L +HSE+LA+A+GLIST P+ ++KNLRICGDCHNAIK +S I GRE+ VRD RF
Sbjct: 646 IRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRF 705
Query: 462 HHFRDGKCSCGDYW 475
H F++G+CSCGDYW
Sbjct: 706 HCFKEGQCSCGDYW 719
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-ARKV 185
D+F+ S+L + L+ + G + H L + F ++ + + LI++Y KC RKV
Sbjct: 239 DMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 186 FDQLRKRNLSSWHLMISGYAANGQG-ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
F+++ + +L W+ M+SGY+ N + D L F QM+ G P+ +F+ V +AC++ +
Sbjct: 299 FEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSS 358
Query: 245 VKEG-FLYFEIMKNDYGIVPG--IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+G ++ +K+D +P I A+I + G+L +A +RM TV +
Sbjct: 359 PSQGKQIHSLALKSD---IPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS 415
Query: 302 ALRNFAQIHGDVELE 316
+ +AQ HG +E+E
Sbjct: 416 MIAGYAQ-HG-IEME 428
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 31/141 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK------ 184
F LL +C + + GK +H L S +N I +Y KC ARK
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 185 -------------------------VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+FDQ+ + +L S++ +IS YA G+ A L LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 220 MRKTGPHPDKETFLVVFAACA 240
MR+ G D T V AC
Sbjct: 131 MREMGLDMDXFTLSAVITACC 151
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S+++ +C + + + ++H + +S F V +NN L+ YGK + A++VF +
Sbjct: 142 TLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199
Query: 190 RK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ SW+ MI Y + +G+ L LF++M + G + D T V A E + G
Sbjct: 200 GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG 259
Query: 249 FLY 251
+
Sbjct: 260 LQF 262
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 207/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL C S+EMGK +H + D+ L ++MY C + A ++F + R
Sbjct: 434 SLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR 493
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++S W+ MISG+A +G G L LFE+M G P+ TF+ AC+ + ++EG F
Sbjct: 494 DISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLF 553
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M +++G P +EHY ++ +LG AG L EA E ++ MP P + V+ + ++H +
Sbjct: 554 HKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKN 613
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPRK-----------------KQSATNMLE 351
++L + A + L+P K+ ++ I + K+ + +E
Sbjct: 614 IKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIE 673
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKALQYH 407
+ ++ D + +K+ + +MRE AGY PD VLH+ID+E K AL YH
Sbjct: 674 VNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYH 733
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+AYGLIST P +P+RI+KNLR+C DCHNA K++SKI GRE+IVRD RFHHF++G
Sbjct: 734 SEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEG 793
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 794 SCSCCDYW 801
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ CG ++E+GK +H + F + L I+MYGKC + R AR VFD + +
Sbjct: 333 SLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L W MIS YA N + +F M G P++ T + + CA A +++ G
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG 448
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 141 LKSIEMGKRVHE-LLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
L +++GK +H ++R K V L LI+MY KC N AR+VFD L K ++ SW
Sbjct: 238 LADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWT 297
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKN 257
MI+ Y +G+ LF +M G P++ T L + C +A A++ G L+ ++N
Sbjct: 298 AMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRN 357
Query: 258 DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
G + A I + G G + A + + +W A+ ++AQ
Sbjct: 358 --GFTLSLVLATAFIDMYGKCGDVRSARSVFDSFK-SKDLMMWSAMISSYAQ 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C + S +G+ VH + + F DV + N LI MY + + LAR +FD++
Sbjct: 126 VIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKI 185
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+++ SW MI Y +G + L L M P + + + A +K G
Sbjct: 186 ENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGK 245
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +M+N G+ A+I + +L A + + + ++ W A+
Sbjct: 246 AMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLS-KASIISWTAM 299
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 214/374 (57%), Gaps = 29/374 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++ +C NL S GK++H L L++ + ++N LI MY KC N + AR++FD++
Sbjct: 346 FVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N S + MI+GYA +G + L LF+ M + P TF+ V +ACA V+EG+
Sbjct: 406 AEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGW 465
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK + I P EHY +I +LG AG L EAE + RMPF P W +L +
Sbjct: 466 NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRT 525
Query: 310 HGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATN 348
HG++EL +A + L+PS A V + R KK+ +
Sbjct: 526 HGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCS 585
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE---AKE 401
+E K R+ + + D + + YE ++ ++G+M+ AGYVPD R+ L D KE
Sbjct: 586 WIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKE 645
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L +HSE+LA+A+GLIST P+ ++KNLRICGDCHNAIK +S I GRE+ VRD RF
Sbjct: 646 IRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRF 705
Query: 462 HHFRDGKCSCGDYW 475
H F++G+CSCGDYW
Sbjct: 706 HCFKEGQCSCGDYW 719
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-ARKV 185
D+F+ S+L + L+ + G + H L + F ++ + + LI++Y KC RKV
Sbjct: 239 DMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 186 FDQLRKRNLSSWHLMISGYAANGQG-ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
F+++ + +L W+ M+SGY+ N + D L F QM+ G P+ +F+ V +AC++ +
Sbjct: 299 FEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSS 358
Query: 245 VKEG-FLYFEIMKNDYGIVPG--IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+G ++ +K+D +P I A+I + G+L +A +RM TV +
Sbjct: 359 PSQGKQIHSLALKSD---IPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS 415
Query: 302 ALRNFAQIHGDVELE 316
+ +AQ HG +E+E
Sbjct: 416 MIAGYAQ-HG-IEME 428
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 54/140 (38%), Gaps = 31/140 (22%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK------ 184
F LL +C + + GK +H L S +N I +Y KC ARK
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 185 -------------------------VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+FDQ+ + +L S++ +IS YA G+ A L LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 220 MRKTGPHPDKETFLVVFAAC 239
MR+ G D T V AC
Sbjct: 131 MREMGLDMDGFTLSAVITAC 150
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S+++ +C + + + ++H + +S F V +NN L+ YGK + A++VF +
Sbjct: 142 TLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199
Query: 190 RK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ SW+ MI Y + +G+ L LF++M + G + D T V A E + G
Sbjct: 200 GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG 259
Query: 249 FLY 251
+
Sbjct: 260 LQF 262
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 211/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++++C L ++ + VH+ + + DVEL +I+MY KC + +R++FD++ ++
Sbjct: 207 TIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQK 266
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI Y +GQG + L LF M +G P++ TF+ + AC+ A V +G F
Sbjct: 267 NVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLF 326
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M YG+ P ++HY ++ +LG AG L +A +E M E +W A +IH
Sbjct: 327 SLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQ 386
Query: 313 VELEDRAEELLGDL---DPSKAI--------------VDKIP--LPPR--KKQSATNMLE 351
V+L ++A +LL L +P I V KI + R KK +E
Sbjct: 387 VDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIE 446
Query: 352 EKNRVSDYRSTD---LYRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + + + D L E YE +K L+ ++ AGYVPDT VLHD+DEE K L H
Sbjct: 447 VDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAH 506
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+TP P+RI KNLR+CGDCH+ K++S I R++IVRD RFHHF++G
Sbjct: 507 SEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEG 566
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 567 ICSCGDYW 574
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELL 154
S V + K G + + A + D FS ++ +C + + MG+ +H +
Sbjct: 68 SWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTV 127
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ D + + L++MY KC A+++FD++ K++L + +MI+GYA G+ +
Sbjct: 128 LKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESW 187
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE-IMKNDYGIVPGIEHYIAIIK 273
+LF+QMR+ G PDK + + ACA A+ + L + + Y + +E A+I
Sbjct: 188 VLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL--DVELGTAMID 245
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ G + + E +RM + V W A+ HG
Sbjct: 246 MYAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHG 282
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
D F S L C N+ I K+VH + T+ + D+ + NKL+ M K + A +F++
Sbjct: 4 DFFISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNK 60
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +R+ SW +MI G+ NG F ++ + G PD + V AC + G
Sbjct: 61 MEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMG 120
Query: 249 -FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMP 292
++ ++KN +++++ ++ + G + A++ +RMP
Sbjct: 121 RLIHSTVLKNGL----HLDNFVCSTLVDMYAKCGMIDNAKQLFDRMP 163
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E GK +H + + + D + N L+++Y KC LAR +FD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++L SW +MISGY +G G + + F +MR G PD+ +F+ + AC+ + +++G+
Sbjct: 494 PSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F IMKND+ I P +EHY ++ +L G+L +A EF+E +P P +W AL +I
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRI 613
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ D+EL ++ E + +L+P K + +KI +K +
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCS 673
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK-----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K +V+ + S + + K +K + +M+E GY P T+Y L + DE KE A
Sbjct: 674 WIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMA 733
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GL++ PPR +R+ KNLR+CGDCH K MSK RE+++RD+ RFHH
Sbjct: 734 LCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHH 793
Query: 464 FRDGKCSCGDYW 475
F++G CSC +W
Sbjct: 794 FKNGYCSCRGFW 805
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
++ + + Y+G D + S+L C N ++ +GK VH L S F + + +N L
Sbjct: 237 EIYKQMMYLGIDVDLAT----IISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTL 292
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++MY KC + A +VF+++ +RN+ SW MI+GY +G+ + L +QM K G D
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDV 352
Query: 230 ETFLVVFAACASAEAVKEG 248
+ ACA + ++ G
Sbjct: 353 VATTSILHACARSGSLDNG 371
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
Q+ + +L C+ G + A+E + + +SS+L C KS+ GK+VH +
Sbjct: 65 QVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSI 124
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
++++ D L KL+ +Y C + + R+VFD + K+N+ W+ M+S YA G +
Sbjct: 125 IKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 214 LMLFEQMRKTG-----PHPDKETF 232
+ LF+ M + G P E F
Sbjct: 185 ICLFKIMVEKGIEGKRPESASELF 208
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++G+ AI + Q DV +S+L +C S++ GK VH+ ++ + ++
Sbjct: 329 RDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MY KC + A VF + +++ SW+ MI
Sbjct: 389 VCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL-------------------- 428
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD T + ACAS A++ G ++ I++N Y + + A++ + G L
Sbjct: 429 -KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGL 485
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + +P + V W + + +HG
Sbjct: 486 ARLLFDMIPSKDLVS-WTVMISGYGMHG 512
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 210/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L + +L ++E G ++H L + + KD + N LI+MY KC AR FD++
Sbjct: 442 YSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN 501
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR+ SW+ MI GY+ +G + L LF+ M+ T P+K TF+ V +AC++A + +G
Sbjct: 502 KRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQA 561
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+FE M DY I P IEHY ++ +LG G EA + + + ++P+V VW AL IH
Sbjct: 562 HFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIH 621
Query: 311 GDVEL--------------EDRAEELLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
V+L +D LL ++ + D + + +K+ +
Sbjct: 622 KKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSW 681
Query: 350 LEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + D + + ++ LN + R+AGYVPD VL D+ ++ KE+ L
Sbjct: 682 VENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLW 741
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AYGLI TP +RIIKNLRIC DCH +K++SK+V RE+++RD RFHHFR
Sbjct: 742 VHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFR 801
Query: 466 DGKCSCGDYW 475
G CSCGDYW
Sbjct: 802 HGVCSCGDYW 811
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L +C + S+++GK++H + +V ++N ++++Y KC + K+F++L
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
RN +W+ +I GY G G + LF M + P + T+ V A AS A++ G
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ 460
Query: 250 ---LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
L + M N +V ++I + G + +A ++M V W A+
Sbjct: 461 IHSLTIKTMYNKDTVVAN-----SLIDMYAKCGRINDARLTFDKMNKRDEVS-WNAMICG 514
Query: 307 AQIHG 311
+HG
Sbjct: 515 YSMHG 519
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L SC L++ +GK VH + D+ + L+E+Y K A+++F+++ K
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
+L W LMI+ YA + + + L LF +MR+T P+ TF V ACAS+ ++ G +
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ ++K +G+ + AI+ V G + + + E +P V W + I
Sbjct: 361 HSCVLK--FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV-TWNTI-----IV 412
Query: 311 GDVELED--RAEELLG-----DLDPSKA 331
G V+L D RA L D+ P++
Sbjct: 413 GYVQLGDGERAMNLFTHMLEHDMQPTEV 440
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF++LL ++ + +H + D + LI+ Y N +AR VFD +
Sbjct: 138 VFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDI 197
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+++ SW M++ YA N + L LF QMR G P+ T +C EA G
Sbjct: 198 CCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGK 257
Query: 249 FLYFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
++ +K D+ + G IA++++ +G +I+A+ E MP + + +
Sbjct: 258 SVHGCALKGCYDHDLFVG----IALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARY 313
Query: 307 AQIHGDVELEDRAEELL 323
AQ DR++E L
Sbjct: 314 AQ-------SDRSKEAL 323
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 208/358 (58%), Gaps = 26/358 (7%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
++ G+ +H L F ++ L++MY KC + R+AR +F++L + + SW+ MI+
Sbjct: 292 ALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMIT 351
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
GYA +G + L LFE+M + PD TF+ V +AC+ ++EG+++FE M DY I
Sbjct: 352 GYAMHGHATEALDLFEEMNRVAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKID 410
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL 322
P ++HY ++ +LG +G L EA + +M P VW AL N +IH +VEL + A E
Sbjct: 411 PTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALER 470
Query: 323 LGDLDPSKA----IVDKI---------------PLPPR--KKQSATNMLEEKNRVSDYRS 361
L +L+P A I+ I + R KK A + +E KN+V + S
Sbjct: 471 LIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLS 530
Query: 362 TD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
D L Y +++ + G M+EAGY P T V HD++++ K + HSERLAIA+GL
Sbjct: 531 GDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGL 590
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
ISTPP L I KNLRIC DCH AIK +SKI RE+ VRD R+HHF+DG CSCGDYW
Sbjct: 591 ISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y ++SLL SC K+I+ GK++H + + F D + KL+ +Y C + AR +FD
Sbjct: 75 YSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFD 134
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ K N+ W+++I GYA NG + L+ QM G PD TF V ACA+ A++
Sbjct: 135 RIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEH 194
Query: 248 GFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G EI +++ + G E + A+I + G + A E +++ V L
Sbjct: 195 G---REI--HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSML 249
Query: 304 RNFAQI-HGDVELEDRAEELLGDLDPSKAIV 333
++Q H D L +E +L L P++A +
Sbjct: 250 AAYSQNGHPDACLSLCSEMVLTGLRPTEATL 280
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 5/195 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +L +C L +IE G+ +HE + + + KDV + LI+MY KC AR+VFD++
Sbjct: 178 TFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI 237
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ W+ M++ Y+ NG L L +M TG P + T + +A A A+ +G
Sbjct: 238 LVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGR 297
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
L+ + ++ ++ A++ + G + A ER+ + V W A+
Sbjct: 298 ELHGLSWRQEFESHDKVK--TALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYA 354
Query: 309 IHGD-VELEDRAEEL 322
+HG E D EE+
Sbjct: 355 MHGHATEALDLFEEM 369
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 226/394 (57%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ +EA+E Q G + SS+L +C N+ +I+ G+ VH L+ ++ D L
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC + +VF+++++R + +W+ MI G A +G+ D L LF ++++
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMK 392
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ T + V ACA A V +G F+ M+ YG+ P +EHY ++ +LG +G EAE+
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAED 452
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------------- 331
+ MP +P VW AL +IHG+ +L +R ++L +L+P +
Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512
Query: 332 --IVDKIPLPPRKKQSAT----NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
V KI + + T ++++ V +++ D + Y K+K + +++
Sbjct: 513 FDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQM 572
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AG+ PDT VL DIDEE KE A+ YHSE+LAIA+GLI+T P + I+KNLR+C DCH+A
Sbjct: 573 AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSA 632
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++S+I RE+IVRD R+HHF++G CSC D+W
Sbjct: 633 TKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VK++ N +I K N ARK+FD++ +R+ SW M+ GY + G+ + L +F+Q
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M++ P + V AAC++ A+ +G +K + + + A++ + G
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG-TALLDMYAKCG 343
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
L E E M E + W A+ IHG E
Sbjct: 344 RLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK--CCNTRLARKVFDQLRK 191
L DS ++ S++ ++H L+ S +D ++ L++ Y N A KVF +
Sbjct: 37 LFDS-KSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPN 95
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+++I G N + + + +M P+K T+ +F AC+ A+AV+EG
Sbjct: 96 PNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEG 151
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 216/370 (58%), Gaps = 32/370 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ + LL GNL + ++G+++H + + + N L+ MY KC + + KVFD +
Sbjct: 552 ILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSM 610
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ +W+ +I+GYA +G G + + +++ M G P++ TF+ + AC+ + V EG
Sbjct: 611 EERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGH 670
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+ M +DYG+ P +EHY ++ +LG AG + AE F+ MP EP +W AL +I
Sbjct: 671 QFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKI 730
Query: 310 HGDVELEDRAEELLGDLDPSKA--------------IVDKIPLPPR-------KKQSATN 348
H +VE+ RA E L ++PS A + D++ + K +
Sbjct: 731 HKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCS 790
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE-------AGYVPDTRYVLHDIDEEAKE 401
++ KN++ + + D E+E+++ + + E GYVPDT +VLHDIDEE KE
Sbjct: 791 WMQIKNKMHSFVTGD---EEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKE 847
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+L YHSE+LA+AYGL+ TP MP++I+KNLRICGDCH IK +S + RE+ VRD RF
Sbjct: 848 SSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRF 907
Query: 462 HHFRDGKCSC 471
HHFR+G CSC
Sbjct: 908 HHFRNGSCSC 917
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C N++++E GK+VH L + + + N LI +YGK + R++FD++ ++ S
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
++ +S N + +F M P PD ++ + +ACA A+ E F M
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V++ N ++ Y + + LARK+FD + R++SSW+ M++GY + + LFE+
Sbjct: 123 VRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFER 182
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI---IKVLG 276
M P + ++ V+ + E + F M + G+ P + +++ ++ LG
Sbjct: 183 M----PERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCE-GMTPEQPNLVSVLSAVRHLG 237
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRN 305
G L V + FE V V A+ N
Sbjct: 238 KPGILESIHVLVHKTGFERDVVVGTAILN 266
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y + A +F+++ RN SW MI+GYA NG+ L+ + + + G
Sbjct: 356 NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGML 415
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P + F AC++ EA++ G
Sbjct: 416 PSLSSLTSSFFACSNIEALETG 437
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L+ Y + R AR+VFD + RN +W+ M++ Y NG LF+ M P D
Sbjct: 101 LLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM----PSRD 156
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
++ + ++ ++E FE M G+
Sbjct: 157 VSSWNTMLTGYCHSQLMEEARNLFERMPERNGV 189
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 217/400 (54%), Gaps = 35/400 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA++ + + + D F+ S++ CG+L ++++GK VH + DV
Sbjct: 185 QNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVV 244
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L+ MY KC + A KVF + +R++++W MI+GYA +G G L LF+ M+++
Sbjct: 245 LGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSK 304
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF V +AC+ + V++G FE M +Y I P I+HY ++ + AG + A
Sbjct: 305 TIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHA 364
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
+F++ MP EP V +W L + HG +L + + LDPS
Sbjct: 365 HKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASL 424
Query: 332 ------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM 379
+ DK P KKQ + +E V + D E EK+ G+ QM
Sbjct: 425 GRWSSVCQVRSLMKDKAP----KKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQM 480
Query: 380 ----REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
++ G+V T VLHDIDEE KE AL HSERLAIAYGL+ TP P+RI+KNLR+C
Sbjct: 481 ARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVC 540
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH IK++S++ RE+IVRD RFHHFR+ CSC DYW
Sbjct: 541 RDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 5/224 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L + G+ +H + + L N LI++Y C A +FD++
Sbjct: 110 FGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMP 169
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +SW M+SGYA NGQ + L LF +M+ D T V C A+ G
Sbjct: 170 EPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKW 229
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
M + G+ + A++ + G L A + + M E V W + IH
Sbjct: 230 VHSYMDKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTAWSTMIAGYAIH 287
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKN 354
G E +A +L + SK I + + + + L EK
Sbjct: 288 GHGE---KALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKG 328
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA--RKVFDQLRKRNLSS 196
G+LK+I+ ++R + +D L +KLIE + +A ++F NL
Sbjct: 21 GDLKAIQA-----HMVRAN-LTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFM 74
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIM 255
W+ +I GY+ + + L+ M G P+ TF V AC + EG L+ +I+
Sbjct: 75 WNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIV 134
Query: 256 KNDYGI-VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
K P + +IK+ + G + A + MP EP W + +AQ
Sbjct: 135 KVGLDFETPLVN---GLIKLYAACGCMDYACVMFDEMP-EPDSASWSTMVSGYAQ 185
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 236/433 (54%), Gaps = 36/433 (8%)
Query: 79 TGHSQN--TNDPLRGNAQLESLDVNLLSL------CKE-GKVREAIEYM--GQDASASAG 127
TG S+N ++ L Q + +D+N++S C + GK EA+E Q
Sbjct: 284 TGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPN 343
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
LL +CGN+ ++ GK H + DV + + LI+MY KC +R FD
Sbjct: 344 SVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFD 403
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ RNL SW+ +++GYA +G+ + + +FE M++ G PD +F V +AC +E
Sbjct: 404 MMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEE 463
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G+ YF+ M ++G+ +EHY ++ +LG +G L EA +++MPFEP VW AL +
Sbjct: 464 GWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSC 523
Query: 308 QIHGDVELEDRAEELLGDLDP--------------SKAI---VDKIPLPPR----KKQSA 346
++H V+L + A + + +L+P SKA+ VD + R KK
Sbjct: 524 RVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPG 583
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E KN+V + D + EK+ L +M+++GYVP T +VL D++E+ KE+
Sbjct: 584 YSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQ 643
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSE+LA+ GL++T P PL++IKNLRIC DCH IK +S RE+ VRD RFH
Sbjct: 644 ILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFH 703
Query: 463 HFRDGKCSCGDYW 475
F+ G CSCGDYW
Sbjct: 704 QFKGGVCSCGDYW 716
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC--------------- 176
SS+L + G+L MG ++H + D + + LI+MYGKC
Sbjct: 214 SSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDE 273
Query: 177 -----CN---TRLAR--------KVFDQLRKRNLS--SWHLMISGYAANGQGADGLMLFE 218
CN T L+R +VF Q + +L+ SW MI+ + NG+ + L LF
Sbjct: 274 VDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFR 333
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M+ G P+ T + AC + A+ G + ++N GI + A+I +
Sbjct: 334 EMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRN--GIFNDVYVGSALIDMYAK 391
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G ++ + + MP V W +L +HG
Sbjct: 392 CGRMLASRLCFDMMPNRNLVS-WNSLMAGYAMHG 424
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 35/144 (24%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +++ +C L +++ GK++H S D + + L+ MY + + + AR VFD+L
Sbjct: 76 VLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKL 135
Query: 190 ----------------RK-------------------RNLSSWHLMISGYAANGQGADGL 214
RK NL SW+ MISG+ +G D +
Sbjct: 136 PQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAV 195
Query: 215 MLFEQMRKTGPHPDKETFLVVFAA 238
++F+ M G PD + V A
Sbjct: 196 LMFQNMHLEGLKPDGTSVSSVLPA 219
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 217/374 (58%), Gaps = 31/374 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C L +I GK +H + D+ + + L++MY KC L+R+VF+++ +
Sbjct: 523 TVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK 582
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQM-----RKTGPHPDKETFLVVFAACASAEAVKE 247
N+ +W+++I +G+G + L LF+ M R P++ TF+ VFAAC+ + + E
Sbjct: 583 NVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISE 642
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEVWEALRNF 306
G F MK+D+G+ P +HY ++ +LG AG L EA E V MP E V W +L
Sbjct: 643 GLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 702
Query: 307 AQIHGDVELEDRAEELLGDLDPSKA--------IVDKIPLPPR-------------KKQS 345
+IH +VEL + A + L L+P+ A I L + KK+
Sbjct: 703 CRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEP 762
Query: 346 ATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKE 401
+ +E ++ V + + D+ + E++ G L+ +MR+ GYVPDT VLH++DE+ KE
Sbjct: 763 GCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKE 822
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L HSE+LAIA+G+++TPP +R+ KNLR+C DCH A K +SKI+ RE+IVRD +RF
Sbjct: 823 NLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRF 882
Query: 462 HHFRDGKCSCGDYW 475
HHF++G CSCGDYW
Sbjct: 883 HHFKEGTCSCGDYW 896
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+S+L +C +L+ +++GK +H +LR + +++ + + L++MY C R+VFD
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 358
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEA 244
+ R + W+ MISGYA NG L+LF +M K G P+ T V AC EA
Sbjct: 359 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEA 415
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S++ +C + ++ + +H F +D + N L++MY + ++ +FD +
Sbjct: 402 TMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM 461
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT----------------GPH-PDKETF 232
R+ SW+ MI+GY +G+ ++ L+L +M++ GP+ P+ T
Sbjct: 462 EVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITL 521
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ V CA+ A+ +G ++ ++N + I A++ + G L + M
Sbjct: 522 MTVLPGCAALAAIAKGKEIHAYAIRN--MLASDITVGSALVDMYAKCGCLNLSRRVFNEM 579
Query: 292 PFEPTVEVWEALRNFAQIHGDVE 314
P V W L +HG E
Sbjct: 580 P-NKNVITWNVLIMACGMHGKGE 601
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 3/180 (1%)
Query: 65 QRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASA 124
Q P + Q+P S+ P + S L S + REAI + +
Sbjct: 27 QTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVS 86
Query: 125 SAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRL 181
A D F ++L + L+ ++ G+++H + V + N L+ MYGKC
Sbjct: 87 GARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD 146
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
KVFD++ R+ SW+ I+ + L F M+ T + V AC++
Sbjct: 147 VCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSN 206
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 102 LLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNL---KSIEMGKRVHEL-L 154
+ +LC+ K +A+E M + + + + S L +C NL + +GK++H L
Sbjct: 166 IAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVAL-ACSNLGVMHGLRLGKQLHGYSL 224
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
R + NN L+ MY K ++ +F+ R++ SW+ MIS ++ + + ++ L
Sbjct: 225 RVGD--QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL 282
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
F M G D T V AC+ E + G
Sbjct: 283 AFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 316
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 209/383 (54%), Gaps = 25/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++A+ SS+L C NL ++ GK++H+ +++ + L+ MY KC
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCG 290
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A K+F ++ R++ +W+ MISGYA +G G + + LFE+M+ G P+ TF+ V
Sbjct: 291 DLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLT 350
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC G FE M+ YGI P ++HY ++ +L AG L A + + MPFEP
Sbjct: 351 ACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHP 410
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV--------------DKIPLPPRK- 342
+ L +++ ++E + A L + DP A D + R
Sbjct: 411 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWM 470
Query: 343 ------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVL 392
K + +E K + ++RS D + +EK+ L +M+ GYVPD +VL
Sbjct: 471 KDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVL 530
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+DE K + L HSE+LAI++GLIST P M LRI KNLR+CGDCHNA K++SKI RE
Sbjct: 531 HDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDRE 590
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+I+RD RFHHFR G CSCGDYW
Sbjct: 591 IILRDTTRFHHFRGGHCSCGDYW 613
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 97 SLDVNLLSLCKEGKVREA-IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLR 155
S + + L K G V EA ++ S ++ S ++ + E E R
Sbjct: 113 SWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAE------EWFR 166
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ D L ++ Y N A + F+ + RNL SW+ +++GY N D L
Sbjct: 167 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 226
Query: 216 LFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
LF M R+ P+ T V C++ A+ G
Sbjct: 227 LFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 260
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 214/372 (57%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E GK +H + + + D + N L+++Y KC LAR +FD +
Sbjct: 296 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 355
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++L SW +MI+GY +G G + + F +MR G PD+ +F+ + AC+ + +++G+
Sbjct: 356 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 415
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F IMKND+ I P +EHY ++ +L G+L +A +F+E +P P +W AL +I
Sbjct: 416 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 475
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ D+EL ++ E + +L+P K + +KI +K +
Sbjct: 476 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCS 535
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK-----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K RV+ + S + + K +K + +M+E GY P T+Y L + DE KE A
Sbjct: 536 WIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMA 595
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GL++ PPR +R+ KNLR+CGDCH K MSK RE+++RD+ RFHH
Sbjct: 596 LCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHH 655
Query: 464 FRDGKCSCGDYW 475
F+DG CSC +W
Sbjct: 656 FKDGYCSCRGFW 667
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+ + + Y+G D + S+L C ++ +GK VH L S+F + + +N L+
Sbjct: 100 IYKQMMYLGIDVDLAT----IISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLL 155
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC + A +VF+++ +RN+ SW MI+GY +G ++L +QM K G D
Sbjct: 156 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVV 215
Query: 231 TFLVVFAACASAEAVKEG 248
+ ACA + ++ G
Sbjct: 216 AITSILHACARSGSLDNG 233
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 27/136 (19%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-------CNTRL---- 181
S +CG+LK G+RV + + K+V L N ++ Y K C ++
Sbjct: 4 SFYATCGDLKE---GRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEK 56
Query: 182 ---------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
A ++FD+L R++ SW+ MISGY +NG GL +++QM G D T
Sbjct: 57 GIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 116
Query: 233 LVVFAACASAEAVKEG 248
+ V CA + + G
Sbjct: 117 ISVLVGCAKSGTLSLG 132
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
KL+ Y C + + R+VFD + K+N+ W+ M+S YA G + + LF+ M + G
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG 57
>gi|15220520|ref|NP_174264.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169106|sp|Q9C6G2.1|PPR63_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g29710, mitochondrial; Flags: Precursor
gi|12321411|gb|AAG50776.1|AC079288_5 hypothetical protein [Arabidopsis thaliana]
gi|332192999|gb|AEE31120.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 475
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 235/430 (54%), Gaps = 26/430 (6%)
Query: 63 KKQRNPSSNEQEPKTGTGHSQNTNDP-LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQD 121
+ +RN + + + G + T P + N +E+ D SLC +G REA+E + D
Sbjct: 55 RYKRNVAGHTLTQNSMVGQYKTTVSPSVAQNVTIETFD----SLCIQGNWREAVEVL--D 108
Query: 122 ASASAGYDV----FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
+ GY + L CG +++E + VHE + DV N +IEMY CC
Sbjct: 109 YLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCC 168
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A KVF+++ + N + +M+ + NG G + + LF + ++ G P+ E F VF+
Sbjct: 169 SVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFS 228
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C VKEG L F+ M +YGIVP +EHY ++ K+L ++GHL EA FVERMP EP+V
Sbjct: 229 TCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSV 288
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLE------ 351
+VWE L N +++HGDVEL DR EL+ LD ++ +DK+ A++ ++
Sbjct: 289 DVWETLMNLSRVHGDVELGDRCAELVEKLDATR--LDKVSSAGLVATKASDFVKKEPSTR 346
Query: 352 -EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDI-DEEAKEKALQ 405
E S +R D + YE + L Q++E GYVPDTRY I E KE+
Sbjct: 347 SEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFG 406
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
Y E +A+ L+ + PR + ++ N+RI GDCH+ +K+MS I GR++I RD K +H F+
Sbjct: 407 YR-EEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFK 465
Query: 466 DGKCSCGDYW 475
+G C C + W
Sbjct: 466 NGVCRCNNLW 475
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 212/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C ++ +GK H + ++DV + I+MY K + +R VFD L+ +
Sbjct: 443 SVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNK 502
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L+SW+ +I+ Y +G G + + LFE+MRK G PD TF+ + C+ A V+EG YF
Sbjct: 503 DLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYF 562
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+N +GI P +EHY ++ +LG AG L +A V MP +P VW +L +F + G+
Sbjct: 563 NEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGE 622
Query: 313 VEL-EDRAEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+E+ + AE+LL G D + + I +K + + +E
Sbjct: 623 LEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIE 682
Query: 352 EKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+V + + D + ++M + L +M + GY P+T VLHD+DEE K + L+ H
Sbjct: 683 LGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGH 742
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAI +GL++T LRI KNLRIC DCHNA K MS++ GRE+I+RDNKRFHHF+DG
Sbjct: 743 SEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDG 802
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 803 LCSCGDYW 810
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G R+A+ Q + D F+ SLL + +LKS+ GK VH + D
Sbjct: 314 QNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSF 373
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ +Y C + AR +FD + +++ SW+ MISGY+ NG D L+LF ++ G
Sbjct: 374 IGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDG 433
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
P + V AC+ A++ G
Sbjct: 434 FQPSDIAVVSVLGACSQQSALRLG 457
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C ++MG R+H L +DV +NN L++MY KC A+ +FD+ ++
Sbjct: 139 TVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRK 198
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAE-------- 243
N SW+ MI G G + LF +M+ + ++ T L + AC
Sbjct: 199 NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKEL 258
Query: 244 ---AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+++ GF Y E++ N + + G LI AE M TV W
Sbjct: 259 HGYSIRHGFQYDELVANGF------------VAAYAKCGMLICAERVFYSME-TKTVNSW 305
Query: 301 EALRNFAQIHGD 312
AL +GD
Sbjct: 306 NALIGGCAQNGD 317
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
D +A F ++ +C +G+ +H ++ + DV + N LI MYGK
Sbjct: 24 DTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVD 83
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGL-MLFEQMR-KTGPHPDKETFLVVFAA 238
A KVF + RNL SW+ +ISG++ NG D ML E M + G PD T + V
Sbjct: 84 AAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPV 143
Query: 239 CASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
CA V+ G + + G+ + +++ + G+L EA+ ++
Sbjct: 144 CAREVDVQMG-IRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 105 LCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
LC +G + EA M ++L +C + + K +H F
Sbjct: 210 LCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQY 269
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D + N + Y KC A +VF + + ++SW+ +I G A NG L L+ QM
Sbjct: 270 DELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMT 329
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
+G PD T + A A ++++ G
Sbjct: 330 YSGLVPDWFTIGSLLLASAHLKSLRYG 356
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L + + ++ +GK +H+ + DV + +I+MY KC AR FD+++
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK 349
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N+ SW MI+GY +G A L LF M +G P+ TF+ V AAC+ A G+
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWH 409
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F MK +G+ PG+EHY ++ +LG AG L +A + +++M EP +W +L +IH
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIH 469
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPRK----KQSATNM 349
+VEL + + L +LDPS V+++ + + K ++
Sbjct: 470 KNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSL 529
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
LE V + D + YE + LN ++ EAGYV +T V HD+DEE KE L+
Sbjct: 530 LELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLR 589
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+G+++T P + ++KNLR+C DCHN IK++SKIV RE +VRD KRFHHF+
Sbjct: 590 VHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFK 649
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 650 DGFCSCGDYW 659
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +C +L I GK+ H+ + D+ +++ LI MY C ARKVFD++
Sbjct: 79 FPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL------VVFAACA--SA 242
KRN+ SW MI GY NG D + LF+ + D FL V +AC+ +A
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAA 198
Query: 243 EAVKEGFLYFEIMKN-DYGIVPG 264
+ + E F I + D G+ G
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVG 221
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC--NTRLARKVFDQLR 190
S++ +C + + + + +H + F + V + N L++ Y K +ARK+FDQ+
Sbjct: 188 SVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
++ S++ ++S YA +G + +F ++ K
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIK 279
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K ++ SW+ +I+ A +G A+ L F MRK +P + +F AC+S + G
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG-- 95
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ V G + I A+I + + G L +A + + +P V +R +
Sbjct: 96 ---KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 214/379 (56%), Gaps = 25/379 (6%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AS + +SS+L +C + SI +VH L+ S F D ++N LI+ Y KC R
Sbjct: 828 ASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRD 887
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++F+ L++ +L SW+ +ISGYA +GQ A LF+ M K + TF+ + + C S
Sbjct: 888 AREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS 947
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
V +G F+ M+ D+GI P +EHY I+++LG AG L +A F+ +P P+ VW
Sbjct: 948 TGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWR 1007
Query: 302 ALRNFAQIHGDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR------ 341
AL + +H +VEL + E LL ++ + +D++ +
Sbjct: 1008 ALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIG 1067
Query: 342 -KKQSATNMLEEKNRVSDYR--STD--LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID 396
+K+ + +E K V + S D R ++ LN + GYVPDT VLHD++
Sbjct: 1068 VRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLE 1127
Query: 397 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
EE K + L HSERLA+AYGL+ TPP P+RI+KNLR C DCH K++SKIV +E+IVR
Sbjct: 1128 EEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVR 1187
Query: 457 DNKRFHHFRDGKCSCGDYW 475
D RFHHF +G CSCGDYW
Sbjct: 1188 DINRFHHFEEGTCSCGDYW 1206
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 85 TNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLK 142
TND + L SL ++ + C + + +A E + +S + FS S+L +C N+
Sbjct: 694 TND----DVILWSLMISRYAQCNQNE--QAFELFIRMMRSSVSPNEFSLSSVLQACANMP 747
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+++GK++H ++ + N LI++Y KC + + ++F LR N SW+ +I
Sbjct: 748 LLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIV 807
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE-GFLYFEIMKNDYGI 261
GY+ +G G L +F +MR + T+ V ACAS ++ G ++ I K+ +
Sbjct: 808 GYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNS 867
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
+ + ++I G + +A E E + E + W A+ + +HG + A+E
Sbjct: 868 DTIVSN--SLIDSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAM---AQE 921
Query: 322 LL 323
L
Sbjct: 922 LF 923
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L + L S+ +GK +H + + + + L++MY KC N AR F+ +
Sbjct: 635 LTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVT 694
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ W LMIS YA Q LF +M ++ P++ + V ACA+ + G
Sbjct: 695 NDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLG 752
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
L NA L+ L+ L SL A + G D+ A ++ LL C G+
Sbjct: 403 LAANAALQWLEDELTSL--------AFPWPGVDSYA------YARLLQGCVARGDARGGR 448
Query: 149 RVH-ELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
VH ++R+ + D+ N L+ MY K A +VFD L +RN+ S+ ++ G+A
Sbjct: 449 AVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHAL 508
Query: 207 NGQGADGLMLFEQMRKTG 224
G+ + LF+++R G
Sbjct: 509 RGEFEEASALFQRLRWEG 526
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 218/382 (57%), Gaps = 26/382 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+ AS A F+SLL + ++ S+ +GK++H + S F+ +V + L+++Y KC +
Sbjct: 404 RQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSI 463
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ A + F ++ RN+ SW+ MIS YA NG+ L F++M +G PD +FL V +AC
Sbjct: 464 KDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSAC 523
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + V+EG +F M Y + P EHY +++ +L +G EAE+ + MP +P +
Sbjct: 524 SHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIM 583
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAI------------------VDKIPLPPR 341
W ++ N +IH + EL RA + L +++ + V K+ R
Sbjct: 584 WSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMR 643
Query: 342 ----KKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLH 393
KK A + +E K+ + + D + E K+ L M E GY PDT LH
Sbjct: 644 DRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALH 703
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
+ DE+ K ++L+YHSERLAIA+ LISTP P+ ++KNLR C DCH AIK++SKIVGRE+
Sbjct: 704 NEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREI 763
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
VRD+ RFHHFRDG CSCGD+W
Sbjct: 764 TVRDSTRFHHFRDGFCSCGDFW 785
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L N EMG+++H + ++ + N L++MY KC A +F L
Sbjct: 314 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 373
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R+ W MIS Y G +GL LF +MR+ D+ TF + A AS ++ G
Sbjct: 374 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I+K+ G + + A++ V G + +A + + MP + + W A+ +
Sbjct: 434 LHSFIIKS--GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISAYAQ 490
Query: 310 HGDVE--LEDRAEELLGDLDP 328
+G+ E L+ E +L L P
Sbjct: 491 NGEAEATLKSFKEMVLSGLQP 511
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+ N +I Y K N ARK+FD + +R +W ++I GY+ Q + LF QM
Sbjct: 76 KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 135
Query: 221 RKTGPHPDKETFLVVFAACASAE 243
++ G PD TF+ + + C E
Sbjct: 136 QRCGTEPDYVTFVTLLSGCNGHE 158
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 59/95 (62%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+++L + L I +G+++H + + FV +V ++N L++ Y K + ARK+FD++
Sbjct: 212 TFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 271
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+++ S++++ISGYA +G+ LF +++ T
Sbjct: 272 PEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTA 306
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 218/382 (57%), Gaps = 26/382 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+ AS A F+SLL + ++ S+ +GK++H + S F+ +V + L+++Y KC +
Sbjct: 444 RQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSI 503
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ A + F ++ RN+ SW+ MIS YA NG+ L F++M +G PD +FL V +AC
Sbjct: 504 KDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSAC 563
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + V+EG +F M Y + P EHY +++ +L +G EAE+ + MP +P +
Sbjct: 564 SHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIM 623
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAI------------------VDKIPLPPR 341
W ++ N +IH + EL RA + L +++ + V K+ R
Sbjct: 624 WSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMR 683
Query: 342 ----KKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLH 393
KK A + +E K+ + + D + E K+ L M E GY PDT LH
Sbjct: 684 DRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALH 743
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
+ DE+ K ++L+YHSERLAIA+ LISTP P+ ++KNLR C DCH AIK++SKIVGRE+
Sbjct: 744 NEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREI 803
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
VRD+ RFHHFRDG CSCGD+W
Sbjct: 804 TVRDSTRFHHFRDGFCSCGDFW 825
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L N EMG+++H + ++ + N L++MY KC A +F L
Sbjct: 354 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 413
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R+ W MIS Y G +GL LF +MR+ D+ TF + A AS ++ G
Sbjct: 414 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 473
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I+K+ G + + A++ V G + +A + + MP + + W A+ +
Sbjct: 474 LHSFIIKS--GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISAYAQ 530
Query: 310 HGDVE--LEDRAEELLGDLDP 328
+G+ E L+ E +L L P
Sbjct: 531 NGEAEATLKSFKEMVLSGLQP 551
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+ N +I Y K N ARK+FD + +R +W ++I GY+ Q + LF QM
Sbjct: 81 KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 140
Query: 221 RKTGPHPDKETFLVVFAACASAE 243
++ G PD TF+ + + C E
Sbjct: 141 QRCGTEPDYVTFVTLLSGCNGHE 163
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 59/95 (62%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+++L + L I +G+++H + + FV +V ++N L++ Y K + ARK+FD++
Sbjct: 252 TFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 311
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+++ S++++ISGYA +G+ LF +++ T
Sbjct: 312 PEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTA 346
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 226/394 (57%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ +EA+E Q G + SS+L +C N+ +I+ G+ VH L+ ++ D L
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC + +VF+++++R + +W+ MI G A +G+ D L LF ++++
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMK 392
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ T + V ACA A V +G F+ M+ YG+ P +EHY ++ +LG +G EAE+
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAED 452
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------IVDKIP- 337
+ MP +P VW AL +IHG+ +L +R ++L +L+P + I K+
Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512
Query: 338 ----------LPPR--KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
+ R K ++++ V +++ D + Y K+K + +++
Sbjct: 513 FDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQM 572
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AG+ PDT VL DIDEE KE A+ YHSE+LAIA+GLI+T P + I+KNLR+C DCH+A
Sbjct: 573 AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSA 632
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++S+I RE+IVRD R+HHF++G CSC D+W
Sbjct: 633 TKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VK++ N +I K N ARK+FD++ +R+ SW M+ GY + G+ + L +F+Q
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M++ P + V AAC++ A+ +G +K + + + A++ + G
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG-TALLDMYAKCG 343
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
L E E M E + W A+ IHG E
Sbjct: 344 RLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK--CCNTRLARKVFDQLRK 191
L DS ++ S++ ++H L+ S +D ++ L++ Y N A KVF +
Sbjct: 37 LFDS-KSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPN 95
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+++I G N + + + +M P+K T+ +F AC+ A+AV+EG
Sbjct: 96 PNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEG 151
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 215/372 (57%), Gaps = 28/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+++L +C +L ++ GK++H S + V ++N +I +Y + + LAR+VFDQ+
Sbjct: 617 LAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQIC 676
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RK ++ W MI A +G G ++LFE+M + G PD T++ V +ACA A V +G
Sbjct: 677 WRKETIT-WTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKG 735
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
Y+E M+N++GIVP + HY ++ + AG L EA EF++RMP P VW +L +
Sbjct: 736 KRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACR 795
Query: 309 IHGDVELEDRAEELLGDLDPS-----KAIVDKIPLPPR----------------KKQSAT 347
+ + +L + A L +DP A+ + R KK++
Sbjct: 796 VRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGF 855
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ + +V + + D+ + Y K + ++++AG+VPD VLHD+D+E KE+
Sbjct: 856 SWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEEL 915
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GLISTP + LRI+KNLR+C DCH AIK +SK V RE+IVRD RFHH
Sbjct: 916 LSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHH 975
Query: 464 FRDGKCSCGDYW 475
FRDG CSC DYW
Sbjct: 976 FRDGYCSCKDYW 987
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 36/164 (21%)
Query: 114 AIEYMGQDASASAGY-DVFS--SLLDSCGNLKSIEMGKRVHE-LLRTS------------ 157
A+++ + SAS+ D F+ S+L +C NL+ ++MGK++H +LRT
Sbjct: 463 ALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALI 522
Query: 158 ------------------AFVKDVEL--NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
A V D+ + L+E Y K +T+ AR++FD + R++ +W
Sbjct: 523 STYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAW 582
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
MI GY NGQ + + LF M GP P+ T V +ACAS
Sbjct: 583 TAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACAS 626
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S + ++ L + G+ +A++ M + A + + +++L SC +++ +G++VH
Sbjct: 314 SWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQF-TLTNVLSSCAAMEACGVGRKVHPF 372
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+ V + N ++ MYGKC + AR VF++++ R++SSW++M+S Y G+
Sbjct: 373 VVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELA 432
Query: 214 LMLFEQM 220
+ +FE M
Sbjct: 433 VSMFENM 439
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ +Y K A VF ++ R+ SW +MI G +G+ D + F M G
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P + T V ++CA+ EA G + G+ + +++ + G G A
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVK-LGLSSCVPVANSVLYMYGKCGDAETARA 403
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVEL 315
ERM +V W + + G +EL
Sbjct: 404 VFERMQVR-SVSSWNVMVSLYTHQGRMEL 431
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 213/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ +L +C +L +++ G+ +H + + +D + N +++MY KC LAR +FD +
Sbjct: 558 ACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPN 617
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++L SW +MI+GY +G G++ + F QMR TG PD+ +F+ + AC+ + + EG+
Sbjct: 618 KDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKI 677
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F IMK + I P +EHY ++ +L G+L++A +F++ MP +P +W AL +IH
Sbjct: 678 FNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHH 737
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
DV+L ++ E + +L+P + + KI KK + +
Sbjct: 738 DVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWI 797
Query: 351 EEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E K +++ + + D + + +K +K L +M+E GY P T Y L + DE KE AL
Sbjct: 798 EIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCG 857
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+G+++ PP +R+ KNLR+CGDCH K MSK RE+I+RD+ RFHHF+D
Sbjct: 858 HSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKD 917
Query: 467 GKCSCGDYW 475
G CSC YW
Sbjct: 918 GSCSCRGYW 926
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
++ C+ G ++ A+E + +++ + S+L C KSI G+RV ++ +S +
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI 183
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D L KL+ MY KC + + R VFD+L + + W+LMIS Y+ +G + + LF+QM
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 243
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
+ G P+ TF + A+ V+EG
Sbjct: 244 ELGIKPNSYTFSSILKCFAAVARVEEG 270
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 32/282 (11%)
Query: 43 KLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNL 102
K+L +Y+ + R RF N + + K G + N +R +++ V
Sbjct: 372 KVLHSYSIKAATLDREVRF-----NNTLLDMYSKCG-----DLNSAIRVFERMDEKTVVS 421
Query: 103 LSLCKEGKVRE-----AIEYMGQDASASAGYDVF--SSLLDSC---GNLKSIEMGKRVHE 152
+ G VRE AI+ + S DV+ +S+L++C GNLKS GK VH+
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKS---GKIVHD 478
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+R + + ++N L +MY KC + + A VF ++K+++ SW+ MI GY N +
Sbjct: 479 YIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNE 538
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYI-- 269
L LF +M++ PD T + ACAS A+ +G ++ ++N Y + Y+
Sbjct: 539 ALTLFAEMQRE-SKPDGTTVACILPACASLAALDKGREIHGYALRNGY----SEDKYVTN 593
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A++ + G L+ A + +P + V W + +HG
Sbjct: 594 AVVDMYVKCGLLVLARSLFDMIPNKDLVS-WTVMIAGYGMHG 634
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L + +E G++VH L+ F + N LI Y R A+K+FD+L
Sbjct: 254 FSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 313
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW+ MISGY NG G+ +F +M G D T + VF ACA+ G L
Sbjct: 314 DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI-----GTL 368
Query: 251 YFEIMKNDYGIVPG-----IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ + Y I + ++ + G L A ERM E TV W ++
Sbjct: 369 LLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSM-- 425
Query: 306 FAQIHGDVE--LEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATN-MLEEKNRVSDY 359
I G V L D A +L ++ + D + A N L+ V DY
Sbjct: 426 ---ITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDY 479
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 217/375 (57%), Gaps = 26/375 (6%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +SS+ S L ++E GK VH + S + N L++MY K + ARKV
Sbjct: 251 ATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKV 310
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD++ ++L +W+ M++ +A G G + + FE+MRK+G + ++ TFL + AC+ V
Sbjct: 311 FDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLV 370
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
KEG YFE+MK +Y + P I+HY+ ++ +LG AG L A F+ +MP EPT VW AL
Sbjct: 371 KEGKRYFEMMK-EYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLA 429
Query: 306 FAQIHGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQ 344
++H + ++ A + + +LDP A + R KK+
Sbjct: 430 ACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKE 489
Query: 345 SATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAK 400
A + +E +N V + + D + E++ + G++ R+ GYVPD YVL +D++ K
Sbjct: 490 PACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEK 549
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E LQYHSE+LA+A+ LI P +RI+KN+RICGDCH+A K +SK+ GRE++VRD R
Sbjct: 550 EANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNR 609
Query: 461 FHHFRDGKCSCGDYW 475
FHHF G CSCGDYW
Sbjct: 610 FHHFSSGSCSCGDYW 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G G+++H L + +DV + + L++MY +C +A VFD+L
Sbjct: 154 TFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKL 213
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +ISG+A G G LM F +M + G T+ VF++ A A+++G
Sbjct: 214 DSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + + + ++ + +G +I+A + +R+ + V L FAQ
Sbjct: 274 WVHAHVIKSRQKLTAFVGN--TLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQ 331
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V+ S + +C K++E +++H L +S F D L+N LI MY KC + AR VFDQ+
Sbjct: 53 VYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQM 112
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R++++ SW +I+GYA N + + L M K P+ TF + A +
Sbjct: 113 RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGA 164
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 220/396 (55%), Gaps = 28/396 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G ++AI+ + + D S S + +C + S+E + + E + S + DV
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVF 359
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+++ LI+M+ KC + AR VFD+ R++ W MI GY +GQ + + L+ M + G
Sbjct: 360 ISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDG 419
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
HP+ TFL + AC + V+EG+ +F M D+ I P +HY II +LG AGHL +A
Sbjct: 420 VHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQA 478
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
E ++ MP +P V VW AL + + H VEL A + L +DPS
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 332 -IVDKIP-LPPRKKQSATN------MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQM 379
+ D++ + R K+ N +E + R+ +R D YE +++ + ++
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRL 598
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E G+V + LHD+++E E+ L HSER+ IAYGLISTP LRI KNLR C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCH 658
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K++SK+VGRE++VRD RFHHF+DG CSCGDYW
Sbjct: 659 AATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A S F LL +CG L ++MG+ VH + F DV + N LI +Y KC
Sbjct: 111 QLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRL 170
Query: 180 RLARKVFD--QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
AR VF+ L +R + SW ++S YA NG+ + L +F QMRK PD + V
Sbjct: 171 GCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLN 230
Query: 238 ACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
A + +++G ++ +MK P + I++ + G + A+ ++M P
Sbjct: 231 AFTCLQDLEQGRSIHASVMKMGLETEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPN 287
Query: 297 VEVWEAL 303
+ +W A+
Sbjct: 288 LILWNAM 294
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+E Q D + S+L++ L+ +E G+ +H + + +
Sbjct: 199 QNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPD 258
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L MY KC A+ +FD+++ NL W+ MISGYA NG D + LF +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD 318
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFE-IMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD + +ACA ++++ E + ++DY I A+I + G +
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISS--ALIDMFAKCGSVEC 376
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A +R + V VW A+ +HG
Sbjct: 377 ARSVFDR-TLDRDVVVWSAMIVGYGLHG 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL+DS + + +++H L L KLI + AR+VFD L
Sbjct: 24 YASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLP 80
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ + W+ +I GY+ N D L+++ +M+ PD TF + AC ++ G F
Sbjct: 81 RPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRF 140
Query: 250 LYFEIMK----NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++ + D + G+ A + LG A + E ER T+ W A+
Sbjct: 141 VHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER-----TIVSWTAI 193
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 208/367 (56%), Gaps = 27/367 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ + +CG L +++ G+++H L F N L+ MY KC AR VF +
Sbjct: 437 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 496
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ MIS +G G + L LF+QM G PD+ +FL + AC A V EGF
Sbjct: 497 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH 556
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE MK D+GI PG +HY +I +LG +G + EA + ++ MPFEPT +WEA+ + + +
Sbjct: 557 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTN 616
Query: 311 GDVELEDRAEELLGDLDPS--------------------KAIVDKIPLPPR--KKQSATN 348
GD+E A + L + P A V K+ + R KK+ +
Sbjct: 617 GDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKL-MRDRGVKKEPGCS 675
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +++ + D E Y+ ++ + +MR+ GYVPDT++VLHD++ KE L
Sbjct: 676 WIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYIL 735
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+ +GL+ PP + ++KNLRICGDCH A+ MSK VGRE++VRD +RFHHF
Sbjct: 736 FAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHF 795
Query: 465 RDGKCSC 471
+DG+CSC
Sbjct: 796 KDGECSC 802
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSA-FVKDVEL--NNKLIEMYGKCCNTRLARKVF 186
F+S+L +C N GK VH +++R FV + L NN L+ +Y K +A+++F
Sbjct: 301 FTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIF 360
Query: 187 DQLRKRNLSSWHL-------------------------------MISGYAANGQGADGLM 215
D + +++ SW+ M+SGY G D L
Sbjct: 361 DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALK 420
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
LF QMR P T+ AAC A+K G
Sbjct: 421 LFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 453
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KD ++ Y + + AR VF+++ + W+ MISGY +G AD LF +M
Sbjct: 230 KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM 289
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGS 277
D+ TF V +ACA+A G ++ +I++ VP + A++ +
Sbjct: 290 VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSK 349
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ A+ + M + V W +
Sbjct: 350 GGKIVIAKRIFDTMNLKDVVS-WNTI 374
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 227/380 (59%), Gaps = 36/380 (9%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELL-----RTSAFVKDVELNNKLIEMYGKCCNTR 180
A + +SS+ + + ++E GK VH + R SAFV N +++MY K +
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV-----GNTILDMYAKSGSMI 318
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
ARKVFD++ K+++ +W+ M++ +A G G + + FE+MRK G H ++ TFL + AC+
Sbjct: 319 DARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 378
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
VKEG YF++MK +Y + P I+HY+ ++ +LG AG L +A F+ +MP +PT VW
Sbjct: 379 HGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDP--------------------SKAIVDKI-PLP 339
AL ++H + ++ A + + +LDP + A V K+
Sbjct: 438 GALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKAT 497
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDI 395
KK+ A + +E +N V + + D R E Y+K + ++ Q+R+AGYVP+T YVL +
Sbjct: 498 GVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHV 557
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
DE+ ++ LQYHSE++A+A+ LI+ P +RI+KN+RICGDCH+A + +SK+ RE++V
Sbjct: 558 DEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVV 617
Query: 456 RDNKRFHHFRDGKCSCGDYW 475
RD RFHHF G CSCGDYW
Sbjct: 618 RDTNRFHHFSSGSCSCGDYW 637
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G S +G+++H L + DV + + L++MY +C +A VFDQL
Sbjct: 167 TFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL 226
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+G+A G G L++F +M++ G T+ VF+A A A+++G
Sbjct: 227 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + + + I+ + +G +I+A + +R+ + V L FAQ
Sbjct: 287 WVHAHMIKSGERLSAFVGN--TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ 344
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ SL+ +C +S++ + +H L S F V L+N LI +Y KC AR+VFD +
Sbjct: 66 LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM 125
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF-AACASAEA 244
R++ SW +I+GYA N + L L M + P+ TF + AA ASA +
Sbjct: 126 PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 210/371 (56%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ C + +E+GK +H L +F + + LI +Y KC A +VFD++
Sbjct: 229 TFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI 288
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RNL W+ M+ A + LFE+M G P+ +FL V AC+ A V++G
Sbjct: 289 PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGR 348
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +M+ DYGI P EHY +++ +LG AG L EA +++MP PT VW AL +I
Sbjct: 349 EYFSLMR-DYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRI 407
Query: 310 HGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATN 348
H D E+ + + ++D S A + R KK++ +
Sbjct: 408 HKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLS 467
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+EE N+V + + D + YEK++ L +M +AGYV DT +VL +D E K + +
Sbjct: 468 WVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETI 527
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSERLAIA+GLI+ PP P+R++KNLR+CGDCH AIK MSK GR LIVRDN RFH F
Sbjct: 528 RYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRF 587
Query: 465 RDGKCSCGDYW 475
DGKCSCGDYW
Sbjct: 588 EDGKCSCGDYW 598
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ S +CG L+ ++GK VH L + + DV + + L++MY KC AR +FD++
Sbjct: 128 IYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEM 187
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN+ SW MI GYA G + L LF+Q + TF V C+S+ ++ G
Sbjct: 188 PERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGK 247
Query: 250 L 250
L
Sbjct: 248 L 248
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 21/202 (10%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y +LL S +S+ G ++H + +++ LI +Y K + +VFD
Sbjct: 25 YRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFD 84
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ K++ ++W +IS +A N L F +M G PD + AC
Sbjct: 85 ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC-------- 136
Query: 248 GFL-YFEIMKNDYGIVPGIEHYI------AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
GFL ++ K+ + + +Y +++ + G + +A + MP E V W
Sbjct: 137 GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSW 195
Query: 301 EALRNFAQIHGDVELEDRAEEL 322
+ I+G +L+D E L
Sbjct: 196 SGM-----IYGYAQLDDGVEAL 212
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 218/385 (56%), Gaps = 27/385 (7%)
Query: 117 YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC 176
Y + A+ SA F+ +L + NL SI +GK++H + S F+ +V L++MY C
Sbjct: 432 YEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYANC 490
Query: 177 CNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
+ + A K F+++ +RN+ +W+ ++S YA NG G L FE+M +G PD +FL +
Sbjct: 491 ASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCIL 550
Query: 237 AACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
AC+ V+EG YF M Y + P EHY A++ L +G EAE+ + +MPFEP
Sbjct: 551 TACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPD 610
Query: 297 VEVWEALRNFAQIHGDVELEDRAE------ELLGDLDPSKAI------------VDKIPL 338
VW ++ N +IH + L +A ++L D P + V K+
Sbjct: 611 EIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKK 670
Query: 339 PPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRY 390
R +K A + +E K++V + + D + K++ L QM + GY PD
Sbjct: 671 AMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISC 730
Query: 391 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
++D+E+K +L+YHSERLAIA+ LI+TP P+ ++KNLR C DCH AIK++SKIVG
Sbjct: 731 AHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVG 790
Query: 451 RELIVRDNKRFHHFRDGKCSCGDYW 475
RE+ VRD+ RFHHFRDG CSCGDYW
Sbjct: 791 REITVRDSNRFHHFRDGSCSCGDYW 815
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S +V + + GKV+E+I+ Q + F ++L + ++MG+++H +
Sbjct: 309 SYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQV 368
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S D ++N L++MY KC A ++F +L R+ W MIS G +GL
Sbjct: 369 VVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGL 428
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY-GIVPGIEHYIAII 272
LF +MR+ D+ TF V A A+ ++ G L+ ++++ + + G A++
Sbjct: 429 KLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSG----CALL 484
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ + + +A + E M E V W AL + +GD
Sbjct: 485 DMYANCASIKDAIKTFEEMS-ERNVVTWNALLSAYAQNGD 523
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I Y K N +AR++FD +R + +W MI Y+ + + D LF +M ++G PD
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 229 KETFLVVFAACASAEAVKE 247
T++ + C E KE
Sbjct: 140 YVTYITLLTGCNDLEVAKE 158
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 97 SLDVNLLSLCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S +V + G EAIE Q+ F++++ + L G+++H +
Sbjct: 208 SFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFV 267
Query: 155 RTSAFVKDVELNNKLIEMYGK--CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
++F+++V + N ++ Y K C N RK+F+++ + + S++++I+ YA G+ +
Sbjct: 268 VKTSFIRNVFVGNAFLDFYSKHDCVNE--VRKLFNEMPELDGVSYNVIITAYAWVGKVKE 325
Query: 213 GLMLFEQM------RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
+ LF+++ RK P P T L + A+ + ++ + D P
Sbjct: 326 SIDLFQELQFTTFDRKNFPFP---TMLSIAASSLDLQMGRQLHAQVVVSMAD----PDFR 378
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++ + G EA+ R+ TV W A+
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP-WTAM 414
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y + +LL C +L+ + + H + + + N L++ Y K AR++F
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
++ + S+++MI+GYA NG + + LF +M+ G P TF V +A
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+LL +C + ++++G+R+H L ++ F + + L++MY KC N + A +VF +
Sbjct: 308 VVSALL-ACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVET 366
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ ++L +W +MI G+A +G L F +M+ G +PD+ FL + AC+ + V +G
Sbjct: 367 KGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGL 426
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+FE M+ DY I P ++HY I+ +LG AG L EA F++ MP P +W AL +
Sbjct: 427 NFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRA 486
Query: 310 HGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATN 348
H ++E+ + E L L+P A V + R +K +
Sbjct: 487 HKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWS 546
Query: 349 MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E + +V + + D E K++ + ++ GY+P+T +VLH+I+EE KE AL
Sbjct: 547 YIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDAL 606
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+A+GLIST P +RI+KNLR+CGDCH+ +K SK+ RE+I+RD KRFHHF
Sbjct: 607 GSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHF 666
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 667 KDGTCSCGDYW 677
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI + + + AR++F Q+ ++N+ SW MI+G++ NG L +F +M + G
Sbjct: 243 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 302
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P+ T + AC A++ G
Sbjct: 303 PNDLTVVSALLACTKIGALQVG 324
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+LL +C + ++++G+R+H L ++ F + + L++MY KC N + A +VF +
Sbjct: 221 VVSALL-ACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVET 279
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ ++L +W +MI G+A +G L F +M+ G +PD+ FL + AC+ + V +G
Sbjct: 280 KGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGL 339
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+FE M+ DY I P ++HY I+ +LG AG L EA F++ MP P +W AL +
Sbjct: 340 NFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRA 399
Query: 310 HGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATN 348
H ++E+ + E L L+P A V + R +K +
Sbjct: 400 HKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWS 459
Query: 349 MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E + +V + + D E K++ + ++ GY+P+T +VLH+I+EE KE AL
Sbjct: 460 YIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDAL 519
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+A+GLIST P +RI+KNLR+CGDCH+ +K SK+ RE+I+RD KRFHHF
Sbjct: 520 GSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHF 579
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 580 KDGTCSCGDYW 590
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 207/366 (56%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
+ +C N+ S+E G + H TS + V ++N L+ +YGKC + + ++F+++ R+
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW M+S YA G+ + + LF++M + G PD T V +AC+ A V++G YF++
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M ++YGIVP I HY +I + +G L EA F+ MPF P W L + + G++E
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Query: 315 LEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNMLEEK 353
+ A E L +LDP SK D + R KK+ + ++ K
Sbjct: 558 IGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWK 617
Query: 354 NRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
++ + + D Y K++ LN ++ + GY PDT +V HD++E K K L YHSE
Sbjct: 618 GKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSE 677
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
RLAIA+GLI P P+R+ KNLR+C DCHNA K +S + GRE++VRD RFH F+DG C
Sbjct: 678 RLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTC 737
Query: 470 SCGDYW 475
SCGD+W
Sbjct: 738 SCGDFW 743
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G +EAIE + D F S+L +CG L +I GK++H + + F
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + + LI+MY KC A+ VFD+++++N+ SW M+ GY G+ + + +F M++
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI----IKVLGSA 278
+G PD T +ACA+ +++EG + + I G+ HY+ + + + G
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G + ++ M V + +AQ VE
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 17/202 (8%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G +A M +D SA+ ++L + + +GK++H + F + + +
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L+ MY A+KVF L RN ++ ++ G A G D L LF M K D
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-----D 234
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH----YIAIIKVLGSAGHLIEA 284
++ + A KE F MK V G++ + +++ G G + E
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMK-----VQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 285 EEF---VERMPFEPTVEVWEAL 303
++ + R F+ + V AL
Sbjct: 290 KQIHACIIRTNFQDHIYVGSAL 311
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 213/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ +L +C + ++ +GK VH + +D + LI+MY KC ++ +FD++ +
Sbjct: 607 TGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNE 666
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ + W+++I+GY +G G + LFE M+ G PD TFL V AC A V EG Y
Sbjct: 667 KDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKY 726
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
M+N YG+ P +EHY ++ +LG AG L EA + V MP EP +W +L + + +G
Sbjct: 727 LGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYG 786
Query: 312 DVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNML 350
D+E+ + + L +L+P+KA + ++ K + + +
Sbjct: 787 DLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWI 846
Query: 351 EEKNRVSDYRSTDLYRGEYEKMK----GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E V + +D E +K++ L ++ + GY PDT VLH+++EE K K L+
Sbjct: 847 EIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKS 906
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI++GL++T LR+ KNLRIC DCHNAIK++SK+V R++IVRDNKRFHHF++
Sbjct: 907 HSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKN 966
Query: 467 GKCSCGDYW 475
G C+CGD+W
Sbjct: 967 GLCTCGDFW 975
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 102 LLSLCKEGKVREAIEYM------GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLR 155
L +LC G + +A+ + G +S+ + LL +CG+ K+I +G++VH L+
Sbjct: 60 LHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVS 119
Query: 156 TSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S ++ DV L+ ++I MY C + +R VFD ++++L ++ ++SGY+ N D +
Sbjct: 120 ASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAI 179
Query: 215 MLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
LF E + T PD T V ACA V+ G + G A+I
Sbjct: 180 SLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGN-ALIA 238
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ G G FV E V+V+E +RN
Sbjct: 239 MYGKCG-------FV-----ESAVKVFETMRN 258
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C + +E+G+ VH L + D + N LI MYGKC A KVF+ +R RNL S
Sbjct: 204 ACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVS 263
Query: 197 WHLMISGYAANGQGADGLMLFEQM---RKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
W+ ++ + NG + +F+++ + G PD T + V ACA+ V+ G +
Sbjct: 264 WNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHG 323
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
+ GI + +++ + G+L EA +
Sbjct: 324 -LAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD 358
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C LK + GK +H + + D + L+ +Y +C + L + +FD++ +
Sbjct: 507 SLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENK 566
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG---- 248
+L W++MI+G++ N + L F QM G P + V AC+ A++ G
Sbjct: 567 SLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVH 626
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F + D + A+I + G + +++ +R+ E VW +
Sbjct: 627 SFALKAHLSEDAFVT------CALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGY 679
Query: 308 QIHG 311
IHG
Sbjct: 680 GIHG 683
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C + + MG VH L ++V +NN L++MY KC AR +FD +
Sbjct: 304 TVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK 363
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS---------- 241
N+ SW+ +I GY+ G L ++M R+ ++ T L V AC+
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423
Query: 242 -AEAVKEGFLYFEIMKNDY 259
A + GFL E++ N +
Sbjct: 424 HGYAFRHGFLKDELVANAF 442
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVR---EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIE 145
+ G + S + + KEG R E ++ M ++ ++L +C +
Sbjct: 359 MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLL 418
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
K +H F+KD + N + Y KC + A +VF + + +SSW+ +I +A
Sbjct: 419 SLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHA 478
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
NG L LF M +G PD+ T + ACA + ++ G
Sbjct: 479 QNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCG 521
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 223/372 (59%), Gaps = 28/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L +C ++ ++E G VH + DV + + L++MY KC A + F+ +
Sbjct: 764 FATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMP 823
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN+ SW+ MISGYA +G G L +F +M++ G PD TF+ V +AC+ V EG+
Sbjct: 824 VRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK 883
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE-ALRNFAQI 309
+F+ M YG+ P IEH+ ++ +LG AG + + E+F++ MP +P + +W L +
Sbjct: 884 HFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRA 943
Query: 310 HG-DVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSAT 347
+G + EL RA ++L +L+P A+ V + L R KK +
Sbjct: 944 NGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGC 1003
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ + K+ V + + D E YEK+K L ++R+AGYVP+T+Y L+D++ E KE+
Sbjct: 1004 SWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEEL 1063
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAIA+ +++ +P+RI+KNLR+CGDCH A K +SKIVGR++I+RD+ RFHH
Sbjct: 1064 LSYHSEKLAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHH 1122
Query: 464 FRDGKCSCGDYW 475
F G CSCGDYW
Sbjct: 1123 FGGGMCSCGDYW 1134
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 108 EGKVREAIEYMGQDASASAGYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
E V +A++Y + AG+ F ++L + + + +G ++H L+ + D
Sbjct: 637 EASVLQALKYFLE--MMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDN 694
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N L+ YGKC +F ++ +R+ SW+ MISGY +G + L M +
Sbjct: 695 AIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ 754
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGF-----LYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
G D TF V +ACAS ++ G +++D +V G A++ +
Sbjct: 755 RGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESD--VVVG----SALVDMYAK 808
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + A F E MP + W ++ + HG
Sbjct: 809 CGKIDYASRFFELMPVR-NIYSWNSMISGYARHG 841
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H L + F DV N LI +Y + N ARK+FD++ ++NL SW +ISGY N
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ LF+ + +G P+ AC
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRAC 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQLRKRNLSS 196
CG+ I++G ++H + V D+ L+N L+ MY C + A +VFD+++ RN +
Sbjct: 254 CGS-TGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVT 312
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGP----HPDKETFL-VVFAACASAEAVKEGFLY 251
W+ +IS Y G LF M+ G P++ T +V AAC+ A+ G +
Sbjct: 313 WNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADC---GLVL 369
Query: 252 FEIM 255
E M
Sbjct: 370 LEQM 373
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 147 GKRVHELLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G+ VH L S V + + N L+ MYGKC A VF + ++ SW+ MISG
Sbjct: 474 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
N + + + F M++ G P + + ++C+S
Sbjct: 534 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSS 569
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 85 TNDPLRGNAQLESLDVNLLSLCKEGKVREAIE---YMGQDASASAGYDVFSSLLDSCGNL 141
+ D + N+ + LD N + EA+ M ++ + + V S+L SC +L
Sbjct: 519 SKDTVSWNSMISGLDHN-------ERFEEAVSCFHTMKRNGMVPSNFSVISTL-SSCSSL 570
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
+ +G+++H DV ++N L+ +Y + + +KVF Q+ + + SW+ I
Sbjct: 571 GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFI 630
Query: 202 SGYAA-NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
A L F +M + G P++ TF+ + AA +S + G ++ I+K
Sbjct: 631 GALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV 690
Query: 260 GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
IE+ A++ G + + E RM
Sbjct: 691 ADDNAIEN--ALLAFYGKCEQMEDCEIIFSRM 720
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 211/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++L + L ++E G+++H D + L++MY KC + A +F ++
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
N+++W+ M+ G A +G+G + L LF+QM+ G PDK TF+ V +AC+ + V E + +
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
M DYGI P IEHY + LG AG + +AE +E M E + ++ L ++ G
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Query: 312 DVELEDRAEELLGDLDP--SKAIV------------DKIPLPPR-------KKQSATNML 350
D E R L +L+P S A V D++ L KK + +
Sbjct: 802 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Query: 351 EEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E KN+ V D RS Y K+K + +++ GYVP+T + L D++EE KE+AL Y
Sbjct: 862 EVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYY 921
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+GL+STPP P+R+IKNLR+CGDCHNA+K ++K+ RE+++RD RFH F+D
Sbjct: 922 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKD 981
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 982 GICSCGDYW 990
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++ +CG L +I GK+VH S + D+ +++ +++MY KC + A+ FD +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +W MISG NG+ +F QMR G PD+ T + A + A+++G
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L + + S+ +G++VH + + ++N LI MY K AR VFD +
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+R+L SW+ +I+G A NG + + LF Q+ + G PD+ T V A +S
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+GK H + T + L N LI MY KC + AR+VFD++ R+L SW+ +++ YA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 206 ANGQGA-----DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
+ + +LF +R+ + + T + C + G+++ + Y
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC-----LHSGYVWASESFHGYA 171
Query: 261 IVPGI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ + ++ A++ + G + E + E MP+ V +W +
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLM 217
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 132 SSLLDSCGNL-KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L + +L + + + K+VH V D ++ LI+ Y + + A +F++
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-H 478
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L +W+ M++GY + G L LF M K G D T VF C A+ +G
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 204/378 (53%), Gaps = 27/378 (7%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLAR 183
A G+ V S +L +C + + +G+RVH + V + N LI++Y KC AR
Sbjct: 222 APDGFTVVS-VLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDAR 280
Query: 184 KVFDQLR-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
K+F ++ R + SW +I G A NG G D L LF M + P + T + V AC+
Sbjct: 281 KMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHC 340
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
V +GF YF+ MK +YGI P IEH ++ +LG AG + EA ++ MP EP VW
Sbjct: 341 GLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRT 400
Query: 303 LRNFAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPR 341
L +H +E+ + A L +LDP + + +
Sbjct: 401 LLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGV 460
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDE 397
+K +++E +N V ++ D E YE + + ++R GY+P T VL DI++
Sbjct: 461 RKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIED 520
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 457
E KE AL YHSERLAIA+ L+ + P P+RI+KNLR+CGDCH AIK++SK+ RE+IVRD
Sbjct: 521 EEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLISKVYDREIIVRD 580
Query: 458 NKRFHHFRDGKCSCGDYW 475
RFHHF+ G CSC DYW
Sbjct: 581 RSRFHHFKGGACSCKDYW 598
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ LL +C L ++ G+ +H + V V + N L+ +YG C A +VFD++
Sbjct: 125 YPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIP 184
Query: 191 --KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RNL SW+ +++G+AANG+ + L +F +M + PD T + V ACA + G
Sbjct: 185 PPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALG 244
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G+V A+I + G + +A + M TV W +L
Sbjct: 245 -RRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSL 298
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 226/380 (59%), Gaps = 36/380 (9%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELL-----RTSAFVKDVELNNKLIEMYGKCCNTR 180
A + +SS+ + + ++E GK VH + R SAFV N +++MY K +
Sbjct: 140 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV-----GNTILDMYAKSGSMI 194
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
ARKVFD + K++L +W+ M++ +A G G + + FE+MRK G H ++ TFL + AC+
Sbjct: 195 DARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 254
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
VKEG YF++MK ++ + P I+HY+ ++ +LG AG L +A F+ +MP +PT VW
Sbjct: 255 HGGLVKEGKQYFDMMK-EHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 313
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDP--------------------SKAIVDKI-PLP 339
AL ++H + ++ A + + +LDP + A V K+
Sbjct: 314 GALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKAT 373
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDI 395
KK+ A + +E +N V + + D R E Y+K + ++ Q+R+AGYVP+T YVL +
Sbjct: 374 GVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHV 433
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
DE+ ++ LQYHSE++A+A+ LI+ P +RI+KN+RICGDCH+A + +SK+ RE++V
Sbjct: 434 DEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVV 493
Query: 456 RDNKRFHHFRDGKCSCGDYW 475
RD RFHHF G CSCGDYW
Sbjct: 494 RDTNRFHHFSSGSCSCGDYW 513
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G S +G+++H L + DV + + L++MY +C +A VFDQL
Sbjct: 43 TFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL 102
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+G+A G G L++F +M++ G T+ VF+A A A+++G
Sbjct: 103 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 162
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + + + I+ + +G +I+A + + + + V L FAQ
Sbjct: 163 WVHAHMIKSGERLSAFVGN--TILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQ 220
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 219/398 (55%), Gaps = 28/398 (7%)
Query: 106 CKE-GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C E G+ +A+E + Q+ SS L +C L+S+ MGK VH + + D
Sbjct: 344 CMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGD 403
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L+ MY KC + L+R VFD + ++++ +W+ MI A +G G + L+LFE M +
Sbjct: 404 LTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQ 463
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
+G P+ TF V + C+ + V+EG F M D+ + P HY ++ V AG L
Sbjct: 464 SGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLH 523
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------- 328
EA EF++RMP EPT W AL +++ +VEL + L +++P
Sbjct: 524 EAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILV 583
Query: 329 -----SKAIVDKIPLPPR--KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNG 377
S+A +I + R K + L+ +RV + D E +K+ L
Sbjct: 584 TAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGE 643
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+M+ AGY PDT YVL DID+E K ++L HSE+LA+A+G+++ + +R+ KNLRICGD
Sbjct: 644 KMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 703
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CHNAIK +SK+VG +IVRD+ RFHHFR+G CSC D W
Sbjct: 704 CHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C LK ++ G+ +H +++V + + L+ +Y +C + + AR VFD +
Sbjct: 236 LSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMP 295
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW+ +++ Y N + GL LF QM G D+ T+ V C ++
Sbjct: 296 HRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVE 355
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
M+N LG + I F+ P + E+LR ++H
Sbjct: 356 MLRKMQN-----------------LGFKPNQITISSFL------PACSILESLRMGKEVH 392
Query: 311 GDVELEDRAEELLGDLDPSKAIV 333
V L+GDL A+V
Sbjct: 393 CYV----FRHWLIGDLTTMTALV 411
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF ++ +CG K VH+ + D L N LI YGKC AR+VFD L
Sbjct: 134 VFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDL 193
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW M S Y G GL +F +M G P+ T + AC+ + +K G
Sbjct: 194 VVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSG 252
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 212/370 (57%), Gaps = 26/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L C +L +E GK++H S + ++N ++ MY + + AR+VFD++
Sbjct: 433 AAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHW 492
Query: 192 RNLS-SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R + +W MI A +G G D + LFE+M + G PD+ TF+ V +AC V EG
Sbjct: 493 RKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKR 552
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ +++ +GIVP + HY ++ +L AG EA+EF+++MP EP W +L + ++H
Sbjct: 553 YFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH 612
Query: 311 GDVELEDRAEELLGDLDPSKAIV---------------DKIPLPPR------KKQSATNM 349
+ +L + A E L +DP + D + R KK++ +
Sbjct: 613 KNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSW 672
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
NRV + + D+ + Y + +++AG+VPD + VLHD+D+E KE+ L
Sbjct: 673 THIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLS 732
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+GL+STP + LRI+KNLR+C DCH AIK +SK+ RE+I+RD RFHHF+
Sbjct: 733 RHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFK 792
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 793 DGFCSCKDYW 802
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT----------- 179
+S+L +C NL + +GK+VH + S ++ N LI MY K +
Sbjct: 298 ITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAV 357
Query: 180 ----------------------RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
+ AR++FD + R++ +W MI GY NG + + LF
Sbjct: 358 MADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELF 417
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
M ++GP P+ T V + CAS ++ G
Sbjct: 418 RLMIRSGPEPNSYTVAAVLSVCASLACLEYG 448
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S V ++ L + G+ EAI+ M D + + +++L SC ++ +G++VH
Sbjct: 129 SWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQF-TLTNVLSSCAATEARGVGRKVHSF 187
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS----------- 202
+ V + N ++ MYGKC + AR VF+++ +R++SSW+ M+S
Sbjct: 188 VVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLA 247
Query: 203 --------------------GYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACAS 241
GY NG A L F +M + PD+ T V +ACA+
Sbjct: 248 LSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACAN 307
Query: 242 AEAVKEG 248
V G
Sbjct: 308 LGMVSIG 314
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N L+ +Y K AR VF ++ +R+ SW +M+ G G+ + + +F M
Sbjct: 94 RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
G P + T V ++CA+ EA G + G+ + +++ + G G
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVK-LGLSSCVPVANSVLNMYGKCGD 212
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
A ERMP E +V W A+ + G ++L
Sbjct: 213 AETARAVFERMP-ERSVSSWNAMVSLDAHLGRMDL 246
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 209/371 (56%), Gaps = 26/371 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ C + +E+GK +H L +F + + LI +Y KC A +VFD++
Sbjct: 229 TFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI 288
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RNL W+ M+ A + LFE+M G P+ FL V AC+ A V++G
Sbjct: 289 PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGR 348
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +M+ DYGI P EHY +++ +LG AG L EA +++MP PT VW AL +I
Sbjct: 349 EYFSLMR-DYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRI 407
Query: 310 HGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATN 348
H D E+ + + ++D S A + R KK++ +
Sbjct: 408 HKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLS 467
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+EE N+V + + D + YEK++ L +M +AGYV DT +VL +D E K + +
Sbjct: 468 WVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETI 527
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSERLAIA+GLI+ PP P+R++KNLR+CGDCH AIK MSK GR LIVRDN RFH F
Sbjct: 528 RYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRF 587
Query: 465 RDGKCSCGDYW 475
DGKCSCGDYW
Sbjct: 588 EDGKCSCGDYW 598
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ S +CG L+ ++GK VH L + + DV + + L++MY KC AR +FD++
Sbjct: 128 IYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEM 187
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN+ SW MI GYA G + L LF+Q + TF V C+S+ ++ G
Sbjct: 188 PERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGK 247
Query: 250 L 250
L
Sbjct: 248 L 248
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 21/202 (10%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y +LL S +S+ G ++H + +++ LI +Y K + +VFD
Sbjct: 25 YRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFD 84
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ K++ ++W +IS +A N L F +M G PD + AC
Sbjct: 85 ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC-------- 136
Query: 248 GFL-YFEIMKNDYGIVPGIEHYI------AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
GFL ++ K+ + + +Y +++ + G + +A + MP E V W
Sbjct: 137 GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSW 195
Query: 301 EALRNFAQIHGDVELEDRAEEL 322
+ I+G +L+D E L
Sbjct: 196 SGM-----IYGYAQLDDGVEAL 212
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 212/370 (57%), Gaps = 25/370 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ +L++C +L + +MGK VH + + + L+ +Y KC NT AR+VF+Q+
Sbjct: 299 TFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQM 358
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +L SW +I GYA NGQ L FE + ++G PD+ TF+ V +AC A V G
Sbjct: 359 PRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGL 418
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +K +G+V +HY +I +L +G EAE ++ MP +P +W +L +I
Sbjct: 419 EYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRI 478
Query: 310 HGDVELEDRAEELLGDLDPSKA--------IVDKIPLPPRK-------------KQSATN 348
HG++EL +RA + L +L+P I L + K+ +
Sbjct: 479 HGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKS 538
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K +V + D + +E + L+ +M+E GYV DT +VLHD++EE KE+ +
Sbjct: 539 WIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNI 598
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+A+G+IST P P+++ KNLR C DCHNA+K +SKIV R++IVRD+ RFH F
Sbjct: 599 FYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCF 658
Query: 465 RDGKCSCGDY 474
DG CSC DY
Sbjct: 659 VDGSCSCKDY 668
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
C++ +++EA++Y+ + S ++S+L+ +C + +E+GKRVH + S F+ +
Sbjct: 42 FCQQNRLKEAVDYLHRIPQPSP--RLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIV 99
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N+LI MY KC + A+ +FD++ +++L SW+ MISGYA G+ LF++M
Sbjct: 100 ISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM---- 155
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
PH D ++ V + S E F +M+ +
Sbjct: 156 PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQEN 189
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H L S D + L+++YGKC + AR +FDQ+ +++ SW MI
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
+G+ +G LF + +G P++ TF V ACA A + G M G P
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGYDPFSF 333
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ V G+ A +MP P + W +L
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSL 369
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 210/370 (56%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS+++ C N +E+G+++ L S+F + + L+ +Y KC + A +VFD++
Sbjct: 220 FSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVP 279
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RNL W+ M+ A + + LF++M+ +G P+ TFL V AC+ A V EG
Sbjct: 280 MRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKY 339
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF++MK I P +HY +++ +LG AG L EA E V MP +PT VW AL IH
Sbjct: 340 YFDLMKESR-IEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIH 398
Query: 311 GDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPR--KKQSATNM 349
+ EL A + + +L P A + L R KK++ +
Sbjct: 399 KNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSW 458
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+EE+N+V + R + + YEK+ L +M +AGYV DT YVL ++D + K + ++
Sbjct: 459 VEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIR 518
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAIA+GLI+ P P+R++KNLR+CGDCHNAIK MS R +IVRDN RFH F
Sbjct: 519 YHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFE 578
Query: 466 DGKCSCGDYW 475
DGKCSC DYW
Sbjct: 579 DGKCSCNDYW 588
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S SCG L ++GK VH L + + DV + + L++MY KC ARK+FD++
Sbjct: 118 VLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM 177
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ +W M+ GYA G+ + L LF++ + +F V + CA++ ++ G
Sbjct: 178 PLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELG 236
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 229/408 (56%), Gaps = 28/408 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHE 152
L S + +L + G+ +A+ Y Q S + D F+ S++ + L K +H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
++ S K+V + L++MY KC +AR +FD + +R++++W+ MI GY +G G
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L LFE+M+K P+ TFL V +AC+ + V+ G F +MK +Y I ++HY A++
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP---- 328
+LG AG L EA +F+ +MP +P V V+ A+ QIH +V ++A E L +L+P
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 329 ----------SKAIVDKIPL-------PPRKKQSATNMLEEKNRVSDYRSTDLYRGE--- 368
+ ++ +K+ +K +M+E KN V + S +
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 369 -YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
Y ++ L ++EAGYVPDT VL ++ + KE+ L HSE+LAI++GL++T +
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ KNLR+C DCHNA K +S + GRE++VRD +RFHHF++G CSCGDYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C +L +E G+ +H+L ++V + N LI MY KC A +F +L+ R L
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFE 253
SW+ MI G+A NG+ D L F QMR PD T++ V A A +++
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+M++ + + A++ + G ++ A + M E V W A+ + HG
Sbjct: 464 VMRS--CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG 518
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ LL CG+ + +GK +H LL S F D+ L MY KC ARKVFD++
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+L SW+ +++GY+ NG L + + M + P T + V A ++ + G
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG-- 255
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
EI + Y + G + + A++ + G L A + + M E V W ++
Sbjct: 256 -KEI--HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSM 308
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G R A+E + + + + S+L + L+ I +GK +H S F V
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++ L++MY KC + AR++FD + +RN+ SW+ MI Y N + +++F++M G
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
P + + ACA ++ G
Sbjct: 333 VKPTDVSVMGALHACADLGDLERG 356
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 214/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C +L S++ GK VH + + F D ++ N L++MY KC LAR +FD +
Sbjct: 202 LACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIP 261
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++L +W +MI+GY +G G + + F +MR+ G PD+ +F+ + AC+ + + EG+
Sbjct: 262 TKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWR 321
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F +M+++ + P +EHY I+ +L +G L A +F++ MP EP +W AL + +IH
Sbjct: 322 FFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 381
Query: 311 GDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNM 349
DV+L ++ E + +L+P K + KI KK +
Sbjct: 382 HDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSW 441
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K++V + + + + +K +K L +M+E GY P TRY L + D KE AL
Sbjct: 442 IEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALC 501
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+G+++ PP +R+ KNLR+CGDCH K +SK +GRE+++RD+ RFHHF+
Sbjct: 502 GHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFK 561
Query: 466 DGKCSCGDYW 475
DG C C +W
Sbjct: 562 DGVCCCRGFW 571
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+EG EAI + D+F+ ++L +C S+E GK VH +R + ++
Sbjct: 76 REGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIF 135
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MY KC + A VF ++ +++ SW+ MI GY+ N + L LF M
Sbjct: 136 VCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE- 194
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
PD T + ACAS ++ G ++ I++N +
Sbjct: 195 MKPDGTTLACILPACASLASLDRGKEVHGHILRNGF 230
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C N + +G+ VH + N L++MY KC A VFD + R
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +W +I+ YA G + + LF +M + G PD T V ACA +++ G
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 212/368 (57%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L +CG ++E G+ VH + + +V + LI+MY KC + AR VF+++ +
Sbjct: 77 AVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNK 136
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ M+ GYA +G D L LF++M G P TF+ V AC+ A V EG+ +F
Sbjct: 137 DVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFF 196
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK++YGI P +EHY ++ +LG AG+L EA E V+ M + +W L ++HG+
Sbjct: 197 YSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGN 256
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+ L ++ E L G+ + + + +K+ + +E
Sbjct: 257 IALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPGCSSIE 316
Query: 352 EKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V ++ + DL R YE ++ +NG ++ GY P T VLHD+++ KE++L H
Sbjct: 317 VNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQKERSLGVH 376
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLI+T P ++I+KNLR+C DCH K++SKI GR++++RD RFHHF +G
Sbjct: 377 SEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNRFHHFVNG 436
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 437 LCSCGDYW 444
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I Y K AR +FD L +R+ W++MI GYA +G +GL+LF QM P+
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
+ T L V +AC A++ G ++N+ GI + ++I + G L +A
Sbjct: 72 EVTVLAVLSACGQTGALETGRWVHSYIENN-GIGINVRVGTSLIDMYSKCGSLEDARLVF 130
Query: 289 ERMPFEPTVEVWEALRNFAQIHG 311
ER+ + V W ++ +HG
Sbjct: 131 ERISNKDVV-AWNSMVVGYAMHG 152
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 205/340 (60%), Gaps = 26/340 (7%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV + LI+MY KC +AR +F+ R+R++ +W+ MI GY ++G G + LFE+M
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ G P++ TFL V +AC+ A V EG YF MK DYG+ PG+EHY ++ +LG AG
Sbjct: 456 KSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGK 515
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-------- 332
L EA F+++MP +P + V+ A+ ++H +VEL + + + + +L P + +
Sbjct: 516 LDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANI 575
Query: 333 ---------VDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGL 375
V ++ K K ++++ KN + + S + Y ++ L
Sbjct: 576 YANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
+++ GYVPDT + HD++++ K + L HSE+LAIA+GLI T P ++I KNLR+C
Sbjct: 636 IEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVC 694
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCHNA K++S + GRE+I+RD +RFHHF+DGKCSCGDYW
Sbjct: 695 NDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 56/106 (52%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +CG L ++ G RVHELL +V + N LI MY KC LA VFD+L +R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
SW+ MI G A NG D + LF +M+ PD T + V A A
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H S + V + +++ Y KC + R AR VFD + +N SW+ MI GYA NG
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
+ L LF +M + G + L AC + EG E++
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+SLL C + G+ VH L + L MY KC AR+VFD++
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ +W+ +++GYA NG + M+ + G PD T + V ACA+A A+
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA-- 179
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ + I G+E + AI+ G + A + MP + +V W A+ +
Sbjct: 180 ---CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVS-WNAMID 235
Query: 306 FAQIHGD 312
+GD
Sbjct: 236 GYAQNGD 242
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 220/386 (56%), Gaps = 27/386 (6%)
Query: 117 YMGQDASASAGYD-VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
Y+G S D + SS L +C L + +G+ +H + S ++ + + L++MYGK
Sbjct: 309 YLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGK 368
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLV 234
C A ++F + +RNL +W+ MI GYA G + L++F+ M ++G P+ T +
Sbjct: 369 CGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVN 428
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
V +C+ K+G+ FE M+ +GI P EHY ++ +LG AG +A E ++ MP
Sbjct: 429 VITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMR 488
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNML 350
P++ VW AL ++HG EL A E L +LDP + ++ + + AT++
Sbjct: 489 PSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIR 548
Query: 351 EE-----------------KNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTR 389
+E KN V +R+ D Y +++ L QM+ AGY+PDT+
Sbjct: 549 KEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQ 608
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
Y L+D++EE KE + HSE+LA+A+GLI PP +P+RI+KNLRIC DCH A K +S IV
Sbjct: 609 YSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIV 668
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
GRE+IVRDN RFHHF+ +CSCGDYW
Sbjct: 669 GREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 25/292 (8%)
Query: 108 EGKVREAIE-YMG-QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
+G+ E IE Y G ++A + ++C + +G++ H + F DV +
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 257
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N +++ YGKC AR VFD + RN SW M++ YA NG + + R++G
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 317
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P CA + G + I I A++ + G G + +AE
Sbjct: 318 EPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC-IDANIFVASALVDMYGKCGCVEDAE 376
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQS 345
+ P + + W A+ I G + D LL + D + R ++
Sbjct: 377 QIFYETP-QRNLVTWNAM-----IGGYAHIGDAQNALL--------VFDDM---IRSGET 419
Query: 346 ATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE-AGYVPDTRYVLHDID 396
A N + N ++ L + YE + MRE G P T + +D
Sbjct: 420 APNYITLVNVITSCSRGGLTKDGYELFE----TMRERFGIEPRTEHYACVVD 467
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 146 MGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
+G ++H L +R D ++ ++MY K +LAR +F ++ RN+ +W+ +++
Sbjct: 136 IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 195
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
+G+ + + + +R+ G P+ + F ACA A +Y + + +G V
Sbjct: 196 VLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGA-------MYLSLGEQFHGFV 246
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 217/413 (52%), Gaps = 25/413 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
P R ++ + +E E + M QD F++L+D+CGNL +I G
Sbjct: 194 PSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQG 253
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+ +H+ + TS DV L+ L+ MY KC AR++FDQ + N ++ M+ YA N
Sbjct: 254 RHLHDRIITSGVCIDVVLHTALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYARN 313
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G D L LF M + G PD TF V AC+ V + + YF ++ D GI EH
Sbjct: 314 GHFGDALKLFWSMEQDGYKPDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEH 373
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
+ + +L AG L +AE+F+ RMP P W +L +IH +VE+ RA E + L
Sbjct: 374 FGCAVDLLARAGWLADAEKFLNRMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLA 433
Query: 328 PSKA-----------------IVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYR 366
P +A + K+ R KK + +E + S++ D +
Sbjct: 434 PHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWH 493
Query: 367 GEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
+ ++++ ++ M+E GYVPDT+ VLHD +EE KE L +HSE+LAI GLI TPP
Sbjct: 494 PDLVQICQEIQRVSKVMKEHGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPP 553
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ + I+KN+R+C DCH A K++SK+ R++++RD FHH DGKCSC DYW
Sbjct: 554 KTTISIVKNIRVCPDCHTAAKVISKVTERKIVIRDINLFHHMEDGKCSCRDYW 606
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 16/140 (11%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G VREA+E LL C +++ ++H L+ + ++ L+NK
Sbjct: 28 GLVREAVEL----------------LLHRCAAERALPQAHQLHALMLATGALRSRYLSNK 71
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L++ YG+C + A VF N+ SW ++IS N L + M+ G HPD
Sbjct: 72 LVQAYGQCGDVESAHAVFACQPDPNVFSWMMLISACLRNALPRAALGHYRAMQLRGCHPD 131
Query: 229 KETFLVVFAACASAEAVKEG 248
+F A A ++ G
Sbjct: 132 AHVVSAIFCAVADTANLELG 151
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S++ + + ++E+G+ + L ++A + D + N L+ MY +C + F +
Sbjct: 134 VVSAIFCAVADTANLELGRSITAPLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAM 193
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE-TFLVVFAACASAEAVKEG 248
R+ SW M++G G+ A L L M + G TF + AC + A+ +G
Sbjct: 194 PSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQG 253
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
L+ I+ + G+ + + A++ + G + EA E ++ EP
Sbjct: 254 RHLHDRIITS--GVCIDVVLHTALLNMYAKCGRVDEARELFDQT-LEP 298
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 208/367 (56%), Gaps = 26/367 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C + ++E G+ +H + +S +V++ LI+MY KC + A VF+ ++++
Sbjct: 264 LSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDI 323
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+W+ MI+GYA +G D L LF++M+ TG P TF+ ACA A V EG FE
Sbjct: 324 VAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFE 383
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M +YGI P IEHY ++ +LG AG L A E ++ M E +W ++ ++HG+
Sbjct: 384 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEF 443
Query: 314 ELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
L E L+GD + + + + K+ + +E
Sbjct: 444 MLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEI 503
Query: 353 KNRVSDYRSTD---LYRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
N+V ++R+ D L E Y ++ ++ +++ GYVP+T VLHD++E KE++LQ HS
Sbjct: 504 DNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHS 563
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
ERLAIAYGLIST P PL+I KNLR+C DCH K++SKI GR++++RD RFHHF DG
Sbjct: 564 ERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGS 623
Query: 469 CSCGDYW 475
CSC D+W
Sbjct: 624 CSCDDFW 630
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG- 224
+ +I Y K N AR +FD++ +R++ SW++MI GY+ +G +D LMLF+++ G
Sbjct: 193 STAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGK 252
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P PD+ T + +AC+ A++ G + + N I ++ A+I + G L EA
Sbjct: 253 PKPDEITVVAALSACSQIGALETG-RWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEA 311
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
P + V W A+ +HG
Sbjct: 312 VLVFNDTPRKDIV-AWNAMITGYAMHG 337
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
LN KL Y R + +F Q +L + I+ + NG +L+ Q+ +
Sbjct: 64 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQ 123
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHL 281
+P++ TF + +C++ K G ++ ++K G+ P Y+A ++ + G +
Sbjct: 124 INPNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDP----YVATGLVDIYAKGGDV 175
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A++ +RMP V + +A+ G+VE
Sbjct: 176 VSAQKVFDRMPERSLVSSTAMITCYAK-QGNVE 207
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 205/340 (60%), Gaps = 26/340 (7%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV + LI+MY KC +AR +F+ R+R++ +W+ MI GY ++G G + LFE+M
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ G P++ TFL V +AC+ A V EG YF MK DYG+ PG+EHY ++ +LG AG
Sbjct: 456 KSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGK 515
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-------- 332
L EA F+++MP +P + V+ A+ ++H +VEL + + + + +L P + +
Sbjct: 516 LDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANI 575
Query: 333 ---------VDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGL 375
V ++ K K ++++ KN + + S + Y ++ L
Sbjct: 576 YANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
+++ GYVPDT + HD++++ K + L HSE+LAIA+GLI T P ++I KNLR+C
Sbjct: 636 IEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVC 694
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCHNA K++S + GRE+I+RD +RFHHF+DGKCSCGDYW
Sbjct: 695 NDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS----SLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
+ G REA+ + G DV + L +CG L ++ G RVHELL +
Sbjct: 239 QNGDSREALALFNR--MVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V + N LI MY KC LA VFD+L +R SW+ MI G A NG D + LF +M+
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356
Query: 223 TGPHPDKETFLVVFAACA 240
PD T + V A A
Sbjct: 357 ENVKPDSFTLVSVIPALA 374
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H S + V + +++ Y KC + R AR VFD + +N SW+ MI GYA NG
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
+ L LF +M + G + L AC + EG E++
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+SLL C + G+ VH L + L MY KC AR+VFD++
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ +W+ +++GYA NG + M+ + G PD T + V ACA+A A+
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA-- 179
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ + I G+E + AI+ G + A + MP + +V W A+ +
Sbjct: 180 ---CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVS-WNAMID 235
Query: 306 FAQIHGD 312
+GD
Sbjct: 236 GYAQNGD 242
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 210/368 (57%), Gaps = 26/368 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ S ++ + G+ +H F + ++ LI+MY KC + ++A +F++LR++
Sbjct: 254 TVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK 313
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW+ +I+GYA +G L LF++MRK PD TF+ V AAC+ + EG +
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRKE-DRPDHITFVGVLAACSRGRLLDEGRALY 372
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M DYGI P ++HY +I +LG G L EA + + M +P VW AL N +IHG+
Sbjct: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432
Query: 313 VELEDRAEELLGDLDPSKA--------------------IVDKIPLPPR-KKQSATNMLE 351
VEL + A E L +L+P + + ++ + R KK A + +E
Sbjct: 433 VELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIE 492
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
KN+V + + D+ Y ++K L G M EAGY PDT V HD++E+ K + H
Sbjct: 493 VKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSH 552
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GLIST P L I KNLRIC DCH AIK +SKI+ RE+ VRD R+H F+ G
Sbjct: 553 SERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHG 612
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 613 MCSCGDHW 620
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SLL SC + K++ GK++H + +L KL+ +Y + AR +FD++
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+NL W+++I GYA NG + ++L+ +M G PD T V AC++ A+ EG
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
E Y I G E + A+I + G +++A +++ V L +
Sbjct: 170 IHE-----YVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAY 224
Query: 307 AQ 308
AQ
Sbjct: 225 AQ 226
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C L +I G+ +HE + S + +D+ + LI+MY KC A +VFD++ R+
Sbjct: 154 VLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRD 213
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
W+ M++ YA NG + + L +M G P + T + V ++ A + G E
Sbjct: 214 AVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYG---RE 270
Query: 254 IMKNDYGIVPGIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
I + +G G + A+I + G + A ER+ E V W A+ +
Sbjct: 271 I--HGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGYAM 327
Query: 310 HG 311
HG
Sbjct: 328 HG 329
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 215/371 (57%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +LL++CG+L ++++G ++ + V V L N LI M K + AR +FD +
Sbjct: 464 YINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMV 523
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W+ MI GY+ +G + L LF++M K P+ TF+ V +AC+ A V EG
Sbjct: 524 RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRR 583
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F + GIVP ++ Y ++ +LG AG L EAE ++ MP +PT +W +L +IH
Sbjct: 584 FFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIH 643
Query: 311 GDVELEDRAEELLGDLDP--------------------SKAIVDKI--PLPPRKKQSATN 348
G++++ +RA E +DP + A V K+ RK+Q T
Sbjct: 644 GNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCT- 702
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + RS L Y ++ L ++ GY+P T+ VLHD+ E+ KE+A+
Sbjct: 703 WIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAI 762
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIAYG++S P P+RI KNLR+C DCH+A K +SK+ GRE+I RD RFHHF
Sbjct: 763 SYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHF 822
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 823 KDGVCSCGDYW 833
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
Query: 95 LESLDVNLLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
+ + +V + K G +A E Y Q F S+LD C +++ GK VH
Sbjct: 224 VSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHA 283
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ V D+ + LI MY C + AR+VFD ++ R++ SW +MI GYA NG D
Sbjct: 284 QCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED 343
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
LF M++ G PD+ T++ + ACA SA ++ ++ +G + A+
Sbjct: 344 AFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS--TAL 401
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + G + +A + + MP V W A+
Sbjct: 402 VHMYAKCGAIKDARQVFDAMPRRDVVS-WSAM 432
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKR 149
N + + + + + G V+EA Q D F S+LD+C + + GK
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKE 179
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH + T+ FV D + L+ MY K + AR+VFD L R++S++++M+ GYA +G
Sbjct: 180 VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGD 239
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHY 268
LF +M++ G P+K +FL + C + EA+ G ++ + M + G+V I
Sbjct: 240 WEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCM--NAGLVDDIRVA 297
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
++I++ + G + A + M V + +A+ +G++E
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE-NGNIE 342
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++++C ++ + +H + + F D+ ++ L+ MY KC + AR+VFD +
Sbjct: 363 YMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP 422
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+R++ SW MI Y NG G + F M+++ PD T++ + AC A+ G
Sbjct: 423 RRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGME 482
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+Y + +K D +V + A+I + G + A + M V W A+ +
Sbjct: 483 IYTQAIKAD--LVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSL 539
Query: 310 HGD 312
HG+
Sbjct: 540 HGN 542
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ L C L+ +GK+V + + ++ N LI++Y C N AR++FD +
Sbjct: 60 YVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVE 119
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ + +W+ +I+GYA G + LF QM G P TFL V AC+S + G
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWG 177
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 217/413 (52%), Gaps = 25/413 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
P R ++ + +E E + M QD F++L+D+CGNL +I G
Sbjct: 194 PSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQG 253
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+ +H+ + TS DV L+ L+ MY KC AR++FDQ + N ++ M++ YA N
Sbjct: 254 RHLHDRIITSGVCIDVVLHTALLNMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYARN 313
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G D L LF M + G PD TF V AC+ V + + YF ++ D GI EH
Sbjct: 314 GHFGDALKLFWSMEQDGYKPDSVTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEH 373
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
+ + +L AG L +AE+F+ RMP P W +L +IH +VE+ RA E + L
Sbjct: 374 FGCAVDLLARAGWLADAEKFLNRMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLA 433
Query: 328 PSKA-----------------IVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYR 366
P +A + K+ R KK + +E + S++ D +
Sbjct: 434 PHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWH 493
Query: 367 GEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
+ ++++ ++ M+E GYVPDT+ VLHD +EE KE L +HSE+LAI GLI TPP
Sbjct: 494 PDLVQICQEIQRVSKVMKEHGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPP 553
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ + I+KN+R+C DCH A K++SK+ R++++RD FHH DG CSC DYW
Sbjct: 554 KTTISIVKNIRVCPDCHTAAKVISKVTERKIVIRDINLFHHMEDGNCSCRDYW 606
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G VREA+E LL C +++ ++H L+ + ++ L+NK
Sbjct: 28 GLVREAVEL----------------LLHRCAAERALPQAHQLHALMLATGALRSRYLSNK 71
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L++ YG+C + A VF + N+ SW ++IS N + L + M+ G HPD
Sbjct: 72 LVQAYGQCGDVESAHAVFARQPDPNVFSWMMLISACLRNARPRAALGHYRAMQLRGCHPD 131
Query: 229 KETFLVVFAACASAEAVKEG 248
+F A A ++ G
Sbjct: 132 AHVVSAIFCAVADTANLELG 151
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S++ + + ++E+G+ + L ++A + D + N L+ MY +C + F +
Sbjct: 134 VVSAIFCAVADTANLELGRSITAPLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAM 193
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE-TFLVVFAACASAEAVKEG 248
R+ SW M++G G+ A L L M + G TF + AC + A+ +G
Sbjct: 194 PSRDEVSWTTMLAGRIQCGREASALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQG 253
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
L+ I+ + G+ + + A++ + G + EA E ++ EP
Sbjct: 254 RHLHDRIITS--GVCIDVVLHTALLNMYAKCGRVDEARELFDQT-LEP 298
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 229/405 (56%), Gaps = 28/405 (6%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
L S + + L K+ V EAIE + Q + +++L C + ++ GK +H
Sbjct: 242 NLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIH 301
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
++ S D + N L++MY KC R+VF+ ++ ++L+SW+ +I+GYA NG+
Sbjct: 302 AVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMT 361
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ + F++M +G PD TF+ + + C+ A +G FE+MK D+GI P +EHY +
Sbjct: 362 EAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACL 421
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS-- 329
+ VLG AG + EA E V+ MPF+PT +W +L N ++HG+V L + + L +L+P+
Sbjct: 422 VDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNA 481
Query: 330 -------------------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS--TDLYRG- 367
K + + + K++ + L+ K+++ + + ++ +R
Sbjct: 482 GNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNS 541
Query: 368 -EYEKM-KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMP 425
EY+K+ K L M E GYVPDT VLHD+ EE + + HSERLA + LI+T MP
Sbjct: 542 VEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMP 601
Query: 426 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCS 470
+RI KNLR+C DCH+ +K +SK+ GR +++RD RFHHF+DG CS
Sbjct: 602 IRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
G FS L +C +L + G+ VH + + D +NN L+ +Y + A ++F
Sbjct: 176 GNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMF 235
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + RNL SW+ +I+G + + F M+ G T + CA A+
Sbjct: 236 DGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALG 295
Query: 247 EG 248
G
Sbjct: 296 SG 297
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 411 LAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
LA + LI+T MP+RI KNL +C DCH+ +KI+SK G
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNTG 739
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 225/396 (56%), Gaps = 28/396 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G EA+ + S + D + S + +C + S+++ K + + + + + DV
Sbjct: 348 KNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVF 407
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+N LI+M+ KC + LAR+VFD+ +++ W MI GY +G+G D + LF M++ G
Sbjct: 408 VNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAG 467
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ + AC + V+EG+ F MK YGI +HY ++ +LG +GHL EA
Sbjct: 468 VCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEA 526
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
+F+ MP EP V VW AL +I+ V L + A E L LDP
Sbjct: 527 YDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASS 586
Query: 332 ----IVDKIPLPPRKKQSATNM----LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQM 379
V K+ + R+K + ++ +E ++ +R D ++ +E+++ L ++
Sbjct: 587 RLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRL 646
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+EAG++P VLHD+++E KE+ L HSERLAIAYGLIST P LRI KNLR C +CH
Sbjct: 647 KEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCH 706
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+A K++SK+V RE++VRD RFHHF++G CSC DYW
Sbjct: 707 SATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 113 EAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+AIE + ++ D F+ +L +C + +E+GKRVH + F DV + N L+
Sbjct: 152 DAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLV 211
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+Y KC AR VF+ L RN+ SW MISGY NG + L +F QMR+ PD
Sbjct: 212 ALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWI 271
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP--GIEH----YIAIIKVLGSAGHLIEA 284
+ V A E +++G K+ +G V G+E I++ + G ++ A
Sbjct: 272 ALVSVLRAYTDVEDLEQG-------KSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVA 324
Query: 285 EEFVERMPFEPTVEVWEAL 303
F ++M P V +W A+
Sbjct: 325 RSFFDQMEI-PNVMMWNAM 342
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA+ GQ + + S+L + +++ +E GK +H + + +
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L MY KC +AR FDQ+ N+ W+ MISGYA NG + + LF++M
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 366
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
D T ACA ++ ++ I K +Y + A+I + G +
Sbjct: 367 IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR--NDVFVNTALIDMFAKCGSVDL 424
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A E +R + V VW A+ +HG
Sbjct: 425 AREVFDR-TLDKDVVVWSAMIVGYGLHG 451
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 126 AGYDV---FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
+G+D FSSLLD + + + ++H L S V+ L K + A
Sbjct: 66 SGFDFDSFFSSLLDHSVHKRHL---NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYA 122
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
RKVFD+ + ++ W+ +I GY+++ D + ++ +M+ +G +PD T V AC+
Sbjct: 123 RKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGV 182
Query: 243 EAVKEG 248
++ G
Sbjct: 183 PVLEVG 188
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 214/362 (59%), Gaps = 26/362 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL +C + +E GK VH + S N L++MY K + ARK+FD+L
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR++ SW+ +++ YA +G G + + FE+MR+ G P++ +FL V AC+ + + EG+
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y+E+MK D GIVP HY+ ++ +LG AG L A F+E MP EPT +W+AL N ++H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 311 GDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNM 349
+ EL A E + +LDP + + K+ KK+ A +
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 350 LEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N + + + D + E K + + +++E GYVPDT +V+ +D++ +E LQ
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 563
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE++A+A+ L++TPP + I KN+R+CGDCH AIK+ SK+VGRE+IVRD RFHHF+
Sbjct: 564 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623
Query: 466 DG 467
D
Sbjct: 624 DA 625
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++LL C K + G+ VH + S F D+ + N L+ MY KC + ARKVF+++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+R+ +W +ISGY+ + + D L+ F QM + G P++ T V A A+
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G ++H F +V + + L+++Y + A+ VFD L RN SW+ +I+G+A
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
L LF+ M + G P ++ +F AC+S +++G +++ ++K+ +V
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ++ + +G + +A + +R+ V W +L HG
Sbjct: 300 GN--TLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG 342
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 210/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S L +C L + +G+++H LR + + + N LI+MY K + AR VFD +
Sbjct: 485 LSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNM 544
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ RN+ SW +++GY +G+G + L LF+QM+K G D TFLVV AC+ + V +G
Sbjct: 545 KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGM 604
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+YF M +GI PG EHY ++ +LG AG L EA E ++ M EPT VW AL + ++I
Sbjct: 605 IYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRI 664
Query: 310 HGDVELEDRAEELLGDL----DPSKAIVDKIPLPPR-----------------KKQSATN 348
H ++EL + A L +L D S ++ + R +K+ +
Sbjct: 665 HANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCS 724
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ K + + D E Y + L ++++ GYVP T + LHD+D+E K L
Sbjct: 725 WIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLL 784
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+AYG+++T P P+RI KNLRICGDCH+A+ +S I+ E+++RD+ RFHHF
Sbjct: 785 FEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHF 844
Query: 465 RDGKCSCGDYW 475
+ G CSC YW
Sbjct: 845 KKGSCSCRSYW 855
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L +C ++ +++ GK+VH + V DV + N L+ MY KC A KVF+ ++K+
Sbjct: 239 NILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK 298
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ M++GY+ G L LF+ M++ D T+ V A A E F
Sbjct: 299 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 358
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
M+ YG+ P + +++ S G L+ ++
Sbjct: 359 RQMQL-YGLEPNVVTLASLLSGCASVGALLYGKQ 391
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-------VKDVELNNKLIEMYGKCCNTRLAR 183
+SLL C ++ ++ GK+ H + + D+ + N LI+MY KC + R+AR
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432
Query: 184 KVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAAC 239
+FD + + +N+ +W +MI GYA +G+ D L LF Q+ +KT P+ T AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492
Query: 240 ASAEAVKEG 248
A ++ G
Sbjct: 493 ARLGELRLG 501
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +CG + S+ G VH ++ + +V + N ++ MYG+C A ++FD++
Sbjct: 130 FPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVL 189
Query: 191 KR---NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH------PDKETFLVVFAACAS 241
+R ++ SW+ +++ Y GQ L + +M G H PD T + + ACAS
Sbjct: 190 ERKIEDIVSWNSILAAYVQGGQSRTALRIAFRM---GNHYSLKLRPDAITLVNILPACAS 246
Query: 242 AEAVKEG 248
A++ G
Sbjct: 247 VFALQHG 253
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 203/370 (54%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L +C L ++E G+++H L + + + N +I MY KC A VF +
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+L SW+ MI+ +G G + LF+QM K G PD+ TFL V AC+ A V++G
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH 547
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M YGI P +HY ++ + AG A ++ MP +P VWEAL +IH
Sbjct: 548 YFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIH 607
Query: 311 GDVELEDRAEELLGDLDPSK--------------------AIVDKIPL-PPRKKQSATNM 349
G+++L A E L L P A V K+ +K+ A +
Sbjct: 608 GNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSW 667
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + D E Y ++ L +M++ GY+PDT++VLHD++ E KE AL
Sbjct: 668 IEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALS 727
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ +G++ PP +R+ KN+RICGDCHNA K MSK+ RE+IVRD KRFHHF+
Sbjct: 728 THSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFK 787
Query: 466 DGKCSCGDYW 475
+G CSC DYW
Sbjct: 788 NGDCSCRDYW 797
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 39/155 (25%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH------ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
+++++ +C N+ S +MGK++H EL +F V +N LI +Y K ARK
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSV--SNALITLYCKNNKVDEARK 349
Query: 185 VFDQLRKRNLSSWH-------------------------------LMISGYAANGQGADG 213
+F + RN+ +W+ +MISG A NG G +G
Sbjct: 350 IFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L LF+QMR G P F AC+ A++ G
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENG 444
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 33/129 (25%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ-------------- 188
S + + VH + S F N+L+EMY K N AR++F++
Sbjct: 28 SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLIT 87
Query: 189 -------------------LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
L R+ ++ MI+GYA NG G L LF MR+ PD
Sbjct: 88 AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147
Query: 230 ETFLVVFAA 238
TF V +A
Sbjct: 148 FTFTSVLSA 156
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 34/161 (21%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+VF+ + + ++W+ MISGY G + L L +MR G D T+ + +ACA+
Sbjct: 242 AREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACAN 301
Query: 242 AEAVKEG-FLYFEIMKND--------------------------------YGI-VPGIEH 267
+ + G ++ I+KN+ Y + V I
Sbjct: 302 VGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT 361
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ AI+ +AG + EA+ F E MP + + + + AQ
Sbjct: 362 WNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQ 402
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 215/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L + +L ++E G+++H L + + KD + N LI+MY KC AR FD++
Sbjct: 411 YSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMD 470
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K++ SW+ +I GY+ +G G + L LF+ M+++ P+K TF+ V +AC++A + +G
Sbjct: 471 KQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRA 530
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F+ M DYGI P IEHY ++ +LG +G EA + + +PF+P+V VW AL IH
Sbjct: 531 HFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIH 590
Query: 311 GDVEL--------------EDRAEELLGDLDPSKAIVDKIPL-------PPRKKQSATNM 349
+++L +D LL ++ + D + KK+ +
Sbjct: 591 KNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSW 650
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + D + + ++ L + R+AGYVPD VL D++++ KE+ L
Sbjct: 651 VENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLW 710
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+A+GLI P +RIIKNLRIC DCH IK++SKIV RE+++RD RFHHFR
Sbjct: 711 MHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFR 770
Query: 466 DGKCSCGDYW 475
G CSCGDYW
Sbjct: 771 QGVCSCGDYW 780
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF++LL ++ + VH + D + LI+ Y C N AR+VFD +
Sbjct: 106 VFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI 165
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ SW M++ YA N D L+LF QMR G P+ T +C EA K G
Sbjct: 166 YFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVG- 224
Query: 250 LYFEIMKNDYGIVPGIEH------YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
K+ +G + + IA++++ +G + EA++F E MP + + +
Sbjct: 225 ------KSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMI 278
Query: 304 RNFAQ 308
+AQ
Sbjct: 279 SRYAQ 283
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 110 KVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
K +EA+E M Q + F+S+L +C +L + +G ++H + +V ++
Sbjct: 286 KSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVS 345
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+++Y KC + K+F ++N +W+ +I GY G G L LF M
Sbjct: 346 NALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQ 405
Query: 227 PDKETFLVVFAACASAEAVKEG----FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P + T+ V A AS A++ G L + M N +V ++I + G +
Sbjct: 406 PTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN-----SLIDMYAKCGRID 460
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+A ++M + V W AL IHG
Sbjct: 461 DARLTFDKMDKQDEVS-WNALICGYSIHG 488
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+ L SC L++ ++GK VH + +D+ + L+E+Y K A++ F+++ K
Sbjct: 209 SAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPK 268
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
+L W LMIS YA + + + L LF +MR++ P+ TF V ACAS + G
Sbjct: 269 DDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLG 326
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 220/386 (56%), Gaps = 27/386 (6%)
Query: 117 YMGQDASASAGYD-VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
Y+G S D + SS L +C L + +G+ +H + S ++ + + L++MYGK
Sbjct: 202 YLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGK 261
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLV 234
C A ++F + +RNL +W+ MI GYA G + L++F+ M ++G P+ T +
Sbjct: 262 CGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVN 321
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
V +C+ K+G+ FE M+ +GI P EHY ++ +LG AG +A E ++ MP
Sbjct: 322 VITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMR 381
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNML 350
P++ VW AL ++HG EL A E L +LDP + ++ + + AT++
Sbjct: 382 PSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIR 441
Query: 351 EE-----------------KNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTR 389
+E KN V +R+ D Y +++ L QM+ AGY+PDT+
Sbjct: 442 KEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQ 501
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
Y L+D++EE KE + HSE+LA+A+GLI PP +P+RI+KNLRIC DCH A K +S IV
Sbjct: 502 YSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIV 561
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
GRE+IVRDN RFHHF+ +CSCGDYW
Sbjct: 562 GREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 25/292 (8%)
Query: 108 EGKVREAIE-YMG-QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
+G+ E IE Y G ++A + ++C + +G++ H + F DV +
Sbjct: 91 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 150
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N +++ YGKC AR VFD + RN SW M++ YA NG + + R++G
Sbjct: 151 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 210
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P CA + G + I I A++ + G G + +AE
Sbjct: 211 EPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC-IDANIFVASALVDMYGKCGCVEDAE 269
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQS 345
+ P + + W A+ I G + D LL + D + R ++
Sbjct: 270 QIFYETP-QRNLVTWNAM-----IGGYAHIGDAQNALL--------VFDDM---IRSGET 312
Query: 346 ATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE-AGYVPDTRYVLHDID 396
A N + N ++ L + YE + MRE G P T + +D
Sbjct: 313 APNYITLVNVITSCSRGGLTKDGYELFE----TMRERFGIEPRTEHYACVVD 360
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 146 MGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
+G ++H L +R D ++ ++MY K +LAR +F ++ RN+ +W+ +++
Sbjct: 29 IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 88
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+G+ + + + +R+ G P+ + F ACA A + G
Sbjct: 89 VLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLG 132
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 207/367 (56%), Gaps = 26/367 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C + ++E G+ +H +++S +V++ LI+MY KC + A VF+ ++++
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+W+ MI+GYA +G D L LF +M+ TG P TF+ ACA A V EG FE
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M +YGI P IEHY ++ +LG AG L A E ++ M + +W ++ ++HGD
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Query: 314 ELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
L E L GD + + + + K+ + +E
Sbjct: 446 VLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEI 505
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+N+V ++R+ D + Y ++ ++ +++ GYVP+T VL D++E KE++LQ HS
Sbjct: 506 ENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHS 565
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
ERLAIAYGLIST P PL+I KNLR+C DCH K++SKI GR++++RD RFHHF DG
Sbjct: 566 ERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGS 625
Query: 469 CSCGDYW 475
CSCGD+W
Sbjct: 626 CSCGDFW 632
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG- 224
+ +I Y K N AR +FD + +R++ SW++MI GYA +G D LMLF+++ G
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P PD+ T + +AC+ A++ G + + I ++ +I + G L EA
Sbjct: 255 PKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
P + V W A+ +HG
Sbjct: 314 VLVFNDTPRKDIV-AWNAMIAGYAMHG 339
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
LN KL Y R + +F Q +L + I+ + NG +L+ Q+ +
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHL 281
+P++ TF + +C++ K G ++ ++K GI P Y+A ++ V G +
Sbjct: 126 INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDP----YVATGLVDVYAKGGDV 177
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A++ +RMP V + +A+ G+VE
Sbjct: 178 VSAQKVFDRMPERSLVSSTAMITCYAK-QGNVE 209
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 221/394 (56%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK EAI+ +D + S+L +C +L +++G+ VHE S F ++V +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI+MY KC AR+VF ++ +R + SW MI+G A +GQ + L LF +M K G
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+ + AC+ + EG +F M DYG++P IEHY ++ + AG L EA E
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK----AIVDKIPLPPRK 342
F+ MP +P VW AL ++H +++L + A + L +LDP ++ I +
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360
Query: 343 KQSAT---NMLEEKN--RVSDYRSTDLYRGEYEKMKG----------------LNGQMRE 381
+ A +++++ + S + S + +E + G L +M+
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKR 420
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GY P T VL D++E+ KEK L HSE+LA+ +GL++TP P+RI+KNLR+C DCH A
Sbjct: 421 RGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAA 480
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+KI+S IV RE+IVRD RFH FRDG+CSC D+W
Sbjct: 481 LKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 33/214 (15%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD---- 187
S +L +C L + GK +H L + F ++ L N ++ +YG C A +F+
Sbjct: 14 SFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQ 73
Query: 188 -----------QLRKR----------------NLSSWHLMISGYAANGQGADGLMLFEQM 220
QL KR N+ SW MISG+ G+ + + LF ++
Sbjct: 74 RDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKL 133
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P++ T + V AACA + G + E G + +I + G
Sbjct: 134 EDEAVRPNEVTVVSVLAACADLGDLDLGRIVHE-YSTKSGFKRNVHVCNTLIDMYVKCGC 192
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
L A M E TV W A+ +HG E
Sbjct: 193 LENARRVFYEME-ERTVVSWSAMIAGLAMHGQAE 225
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 225/397 (56%), Gaps = 30/397 (7%)
Query: 107 KEGKVREAI---EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
K G EA+ YM V S++L S + S+E+ + + + + S + D+
Sbjct: 333 KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLAS-AQVGSLELAQWMDDYVSKSNYGSDI 391
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+N LI+MY KC + AR+VFD+ +++ W MI GY +GQG + + L+ M++
Sbjct: 392 FVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQA 451
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G P+ TF+ + AC + VKEG+ F MK D+ IVP EHY ++ +LG AG+L E
Sbjct: 452 GVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DFEIVPRNEHYSCVVDLLGRAGYLGE 510
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------S 329
A F+ ++P EP V VW AL + +I+ V L + A L LDP S
Sbjct: 511 ACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYAS 570
Query: 330 KAIVDKIP----LPPRK---KQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQ 378
+ D + L K K +++E ++ + D + + +++++ L +
Sbjct: 571 SCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERR 630
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
++E G+VP T VLHD++ E KE+ L +HSER+A+AYGLIST P LRI KNLR C +C
Sbjct: 631 LKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNC 690
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H+AIK++SK+V RE+IVRD RFHHF+DG CSCGDYW
Sbjct: 691 HSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L + +H + F DV + N L+ +Y KC + +A+ VFD L
Sbjct: 157 FPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLY 216
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R + SW +ISGYA NG+ + L +F QMR G PD + + A + +++G
Sbjct: 217 HRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQG-- 274
Query: 251 YFEIMKNDYGIV--PGIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +G V G+E I++ G + A+ F ++M V +W A+
Sbjct: 275 -----RSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMK-TTNVIMWNAM 327
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ GK EA+ Q + + S+L + ++ +E G+ +H + +
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L Y KC +A+ FDQ++ N+ W+ MISGYA NG + + LF M
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351
Query: 225 PHPDKETFLVVFAACASAEA 244
PD T V A ASA+
Sbjct: 352 IKPDSVT--VRSAVLASAQV 369
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SL+D+ + + ++ ++H L S + L KL+ ARK+FD+
Sbjct: 59 YASLIDNSTHKRHLD---QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC 115
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
++ W+ +I Y+ N D + ++ MR TG HPD TF V AC E + G
Sbjct: 116 YPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKAC--TELLDFGLS 173
Query: 250 --LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW------- 300
++ +I+K +G +++ ++ + GH+ A+ + + + T+ W
Sbjct: 174 CIIHGQIIKYGFGSDVFVQN--GLVALYAKCGHIGVAKVVFDGL-YHRTIVSWTSIISGY 230
Query: 301 -------EALRNFAQI 309
EALR F+Q+
Sbjct: 231 AQNGKAVEALRMFSQM 246
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 203/372 (54%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS L +C +L ++ +GK VH ++ +V + LI+MY KC + AR +FD++
Sbjct: 416 TISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRM 475
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW+ MISGY +GQGA+ L L++ M P TFL V AC+ V EG
Sbjct: 476 DNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQ 535
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE-VWEALRNFAQ 308
F +M N+Y I PGIEH ++ +LG AG L EA E + P VW AL
Sbjct: 536 KVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACM 595
Query: 309 IHGDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPRK--KQSAT 347
+H + +L A + L +LD S+A V + RK K
Sbjct: 596 VHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGC 655
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
++E +R + + D + Y ++ L +M EAGY P T L+D++EE KE
Sbjct: 656 TLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHM 715
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
++ HSE+LAIA+GL+ST P +RIIKNLR+C DCHNA K +SK+ R ++VRD RFHH
Sbjct: 716 VKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHH 775
Query: 464 FRDGKCSCGDYW 475
FRDG CSCGDYW
Sbjct: 776 FRDGVCSCGDYW 787
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+ + +H + + D ++ L +Y + + AR +FD + ++ + SW+ MISGYA
Sbjct: 331 LARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYA 390
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
NG + LF+ M++ P+ T +ACA A+ G I+ + + +
Sbjct: 391 QNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKE-KLELNV 449
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + G + EA +RM + V W A+ + +HG
Sbjct: 450 YVMTALIDMYAKCGSIAEARSIFDRMDNKNVVS-WNAMISGYGLHG 494
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S L + + MG+ VH + + L+ +Y KC + A+ +FD++
Sbjct: 214 TLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRM 273
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
+L +++ +ISGY+ NG + LF+++ +G P+ T + V
Sbjct: 274 DNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVI 320
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
+ +H L + + D + + L ++Y K ARKVFD + + W+ +++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL-- 190
Query: 207 NGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
G++ L F +M G PD T A A A + G + YG+ G+
Sbjct: 191 --PGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCV-----HGYGVKCGL 243
Query: 266 ---EHYI-AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
EH + ++ + G + A+ +RM P + + AL + ++G VE
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDRMD-NPDLVAYNALISGYSVNGMVE 295
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 203/370 (54%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L +C L ++E G+++H L + + + N +I MY KC A VF +
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+L SW+ MI+ +G G + LF+QM K G PD+ TFL V AC+ A V++G
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH 547
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M YGI P +HY ++ + AG A ++ MP +P VWEAL +IH
Sbjct: 548 YFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIH 607
Query: 311 GDVELEDRAEELLGDLDPSK--------------------AIVDKIPL-PPRKKQSATNM 349
G+++L A E L L P A V K+ +K+ A +
Sbjct: 608 GNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSW 667
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + D E Y ++ L +M++ GY+PDT++VLHD++ E KE AL
Sbjct: 668 IEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALS 727
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ +G++ PP +R+ KN+RICGDCHNA K MSK+ RE+IVRD KRFHHF+
Sbjct: 728 THSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFK 787
Query: 466 DGKCSCGDYW 475
+G CSC DYW
Sbjct: 788 NGDCSCRDYW 797
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 39/155 (25%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH------ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
+++++ +C N+ S +MGK+VH EL +F V +N LI +Y K ARK
Sbjct: 292 YTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSV--SNALITLYCKNNKVDEARK 349
Query: 185 VFDQLRKRNLSSWH-------------------------------LMISGYAANGQGADG 213
+F + RN+ +W+ +MISG A NG G +G
Sbjct: 350 IFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L LF+QMR G P F AC+ A++ G
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENG 444
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 42/192 (21%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ-------------- 188
S + + VH + S F N+L+EMY K N AR++F++
Sbjct: 28 SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLIT 87
Query: 189 -------------------LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
L R+ ++ MI+GYA NG G L LF MR+ PD
Sbjct: 88 AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147
Query: 230 ETFLVVFAACASAEAVKE--GFLYFEIMKNDYGIVPG------IEHYIAIIKVLG-SAGH 280
TF V +A ++ G ++ ++K G V + Y+ LG S
Sbjct: 148 FTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSA 207
Query: 281 LIEAEEFVERMP 292
++ A + + MP
Sbjct: 208 MVSARKLFDEMP 219
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 34/161 (21%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+VF+ + + ++W+ MISGY G + L L +MR G D T+ + +ACA+
Sbjct: 242 AREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACAN 301
Query: 242 AEAVKEG-FLYFEIMKND--------------------------------YGI-VPGIEH 267
+ + G ++ I+KN+ Y + V I
Sbjct: 302 VGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT 361
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ AI+ +AG + EA+ F E MP + + + + AQ
Sbjct: 362 WNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQ 402
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 205/380 (53%), Gaps = 43/380 (11%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FS +L++C N S E+GK+VH + F + L+ MY KC N A +VF +
Sbjct: 306 TFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKET 365
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +L SW +I+GYA NGQ + + FE + K+G PD TF+ V +ACA A V +G
Sbjct: 366 PQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGL 425
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +K YG+ +HY II +L +G EAE + +M +P +W +L +I
Sbjct: 426 DYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRI 485
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEK---NRVSDYRSTDLYR 366
HG+++L RA E L +++P P + N+ + V+ R T R
Sbjct: 486 HGNLKLAQRAAEALFEIEPEN---------PATYVTLANIYATAGMWSEVAKIRKTMDDR 536
Query: 367 GEYEK-------------------------------MKGLNGQMREAGYVPDTRYVLHDI 395
G +K + L+ +M+E G+VPDT +VLHD+
Sbjct: 537 GVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDV 596
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
++E KE+ L YHSE+LA+A+G+ISTP P+++ KNLR C DCH AIK +SKI R++IV
Sbjct: 597 EDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIV 656
Query: 456 RDNKRFHHFRDGKCSCGDYW 475
RD+ RFH F DG CSC DYW
Sbjct: 657 RDSNRFHFFEDGHCSCRDYW 676
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Query: 59 TRFVKKQR-NPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEY 117
TRF+ + + SS+ +PKT + + + D + LC++ +++EA++
Sbjct: 2 TRFLANLKPSHSSSPFQPKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQI 61
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
+ Q SA V+S+L+ SC + ++ GK+VH+ ++ S FV + + N+L+EMY KC
Sbjct: 62 LHQIDKPSAS--VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCD 119
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ ++K+FD++ +R+L SW+++ISGYA G + LF++M P D ++ + +
Sbjct: 120 SLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKM----PERDNFSWTAMIS 175
Query: 238 ACASAEAVKEGFLYFEIMK 256
+ E F +MK
Sbjct: 176 GYVRHDRPNEALELFRMMK 194
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 217/375 (57%), Gaps = 26/375 (6%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +SS+ S L ++E GK VH + S N L++MY K + ARKV
Sbjct: 251 ATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKV 310
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD++ ++L +W+ M++ +A G G + + FE+MRK+G + ++ TFL + AC+ V
Sbjct: 311 FDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLV 370
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
KEG YFE+MK +Y + P I+H++ ++ +LG AG L A F+ +MP EPT VW AL
Sbjct: 371 KEGKRYFEMMK-EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLA 429
Query: 306 FAQIHGDVELEDRAEELLGDLDP--------------------SKAIVDKI-PLPPRKKQ 344
++H + ++ A + + +LDP + A V +I KK+
Sbjct: 430 ACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKE 489
Query: 345 SATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAK 400
A + +E +N V + + D E++ + GQ+ R+ GYVPD YVL +D++ +
Sbjct: 490 PACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQER 549
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E LQYHSE+LA+A+ LI P +RI+KN+RICGDCH+A K +SK+ GRE++VRD R
Sbjct: 550 EANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNR 609
Query: 461 FHHFRDGKCSCGDYW 475
FHHF +G CSC DYW
Sbjct: 610 FHHFSNGSCSCADYW 624
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 61/302 (20%)
Query: 50 TPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLES--------LDVN 101
P P+VY F+ T S+N D + +A L S LD +
Sbjct: 48 APTPRVYHT--FI--------------TACAQSKNLEDARKVHAHLASSRFAGDAFLDNS 91
Query: 102 LLSL-CKEGKVREAIEY--------MGQDASASAGYD----------------------- 129
L+ L CK G V EA + M S AGY
Sbjct: 92 LIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPN 151
Query: 130 --VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
F+SLL + G +G+++H L + +DV + + L++MY +C +A VFD
Sbjct: 152 GFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFD 211
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+L +N SW+ +ISG+A G G LM F +M + G T+ VF++ A A+++
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQ 271
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G +++ ++K+ + + ++ + +G +I+A + +R+ + V L F
Sbjct: 272 GKWVHAHMIKSRQKMTAFAGN--TLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAF 329
Query: 307 AQ 308
AQ
Sbjct: 330 AQ 331
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 203/383 (53%), Gaps = 25/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M +D+ SS+L C NL ++ G++VH+ ++V + L+ MY KC
Sbjct: 228 MVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCG 287
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A KVFD++ +++ +W+ MISGYA +G G + LFE+M+ G PD T L V
Sbjct: 288 DLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLT 347
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC G FE M+ Y I P I+HY ++ +L AG L A + MPFEP
Sbjct: 348 ACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHP 407
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----------IVDKIPLPPRK---- 342
+ L +++ ++E + A L + DP A + +K R
Sbjct: 408 SAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWM 467
Query: 343 ------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVL 392
K + +E K ++RS D + ++K+ L M+ GYVPD + L
Sbjct: 468 KDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFAL 527
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+++ K + L HSE+LAIA+GLIST P M LRI KNLRICGDCHNA K++SKI RE
Sbjct: 528 HDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDRE 587
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+I+RD RFHHFR G CSCGDYW
Sbjct: 588 IILRDTTRFHHFRGGHCSCGDYW 610
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
+MG +L R + D L ++ Y N + A + F + RNL SW+ +++GY
Sbjct: 154 DMGA-AEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGY 212
Query: 205 AANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
N + D L +F+ M + P+ T V C++ A+ G
Sbjct: 213 VKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFG 257
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 205/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ +L++C +L + ++GK++H + F + L+ MY KC + A+ VF+ L
Sbjct: 354 TFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEIL 413
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +L SW ++ GYA +GQ L FE + K+G PD F+ V +ACA A V +G
Sbjct: 414 PQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGL 473
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +K +G+ I+HY II +L AG EAE + MP +P +W AL +I
Sbjct: 474 EYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRI 533
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
HG++EL RA + L +++P I + + K+ +
Sbjct: 534 HGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMS 593
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E + V + D + E + L+ +M+E GYVPDT +VLHD++ E KE+ L
Sbjct: 594 WIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENL 653
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+A+G+ISTP P+++ KNLR C DCHNAIK +S I GR++IVRD+ RFH F
Sbjct: 654 SYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCF 713
Query: 465 RDGKCSCGDYW 475
G CSC DYW
Sbjct: 714 EGGSCSCKDYW 724
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 96 ESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLR 155
E++D+ LC + ++REA++ + + A ++ +LL C ++++ GK+VH ++
Sbjct: 93 EAIDI----LCGQSRLREAVQLLYRIEKPYAS--IYLTLLKFCLKQRALKEGKQVHAHIK 146
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
TS + + ++N+L++MY KC + A KVFD++ R+L SW++MISGY G
Sbjct: 147 TSGSI-GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARN 205
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM-KNDY 259
LF++M P+ D ++ + + C +E + +M K+DY
Sbjct: 206 LFDKM----PNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDY 246
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
+ S+ MGK++H + D + L++MYGKC + AR +FD++ +R++ SW M
Sbjct: 264 IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTM 323
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
I Y NG+ +G LF + + P+ TF V ACA A G + Y
Sbjct: 324 IHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLG-----KQIHAYM 378
Query: 261 IVPGIEHY----IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR-NFAQIHG 311
+ G + + A++ + G + A+ E +P +P + W +L +AQ HG
Sbjct: 379 VRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQ-HG 432
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 207/374 (55%), Gaps = 26/374 (6%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y S+L C L ++ G+ VH + +F DV + LI MY KC N A++VF
Sbjct: 333 YPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFH 392
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+++ W+ MI+GYA +G G L +F MR G PD T++ AC+ VKE
Sbjct: 393 TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKE 452
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F M + I PG EHY ++ +LG +G + EA + ++ MP EP +W AL
Sbjct: 453 GREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM-------------- 349
++H + E+ + A + L +L+P A ++ I + + A+ M
Sbjct: 513 RMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPG 572
Query: 350 ---LEEKNRVSDYRSTDL-----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+E RV + S D+ + ++ L+G + E+GY D +VLHDIDEE K
Sbjct: 573 CSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKS 632
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+L+YHSER A+AYGL+ P MP+R++KNLR+CGDCH+AIK+++KI RE+I+RD RF
Sbjct: 633 HSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRF 692
Query: 462 HHFRDGKCSCGDYW 475
HHF+DG CSC DYW
Sbjct: 693 HHFKDGFCSCRDYW 706
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD++ R++ +W M+SGY G+ + LF++M P + ++ + + A
Sbjct: 162 ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM----PKRNVVSWTAMISGYAQ 217
Query: 242 AEAVKEGFLYFEIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
V FE+M +N+ + YI AGH+ +A E MP P
Sbjct: 218 NGEVNLARKLFEVMPERNEVSWTAMLVGYI-------QAGHVEDAAELFNAMPEHPVAAC 270
Query: 300 WEALRNFAQ 308
+ F Q
Sbjct: 271 NAMMVGFGQ 279
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAA 206
RV+E R + D ++ + G C R+ AR +FD++ KRN+ SW MISGYA
Sbjct: 158 RVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ 217
Query: 207 NGQGADGLMLFEQM 220
NG+ LFE M
Sbjct: 218 NGEVNLARKLFEVM 231
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 205/375 (54%), Gaps = 29/375 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHEL----LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F ++L +C +L ++++GK VH L+ + V +V L +I MY KC +A +V
Sbjct: 362 TFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQV 421
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F + R+L+SW+ MISG A NG L LFE+M G PD TF+ V +AC A V
Sbjct: 422 FRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFV 481
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ G YF M DYGI P ++HY +I +L +G EA+ + M EP +W +L N
Sbjct: 482 ELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLN 541
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQ 344
+IHG VE + E L +L+P + I K+ KK
Sbjct: 542 ACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKV 601
Query: 345 SATNMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+E V ++ D + + E + ++ + E G+VPDT VL+D+DEE K
Sbjct: 602 PGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWK 661
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E AL HSE+LAIA+GLIST P +RI+KNLR+C +CH+A K++SKI RE+I RD R
Sbjct: 662 EGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNR 721
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+DG CSC D W
Sbjct: 722 FHHFKDGFCSCNDRW 736
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+ Q+A S S+L +CG+L+S+E+GK + +R F K+++
Sbjct: 236 QSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQ 295
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L N L++MY KC ARK+FD + +++ W+ MI GY + L+LFE M +
Sbjct: 296 LVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLREN 355
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGI--VPGIEHYIAIIKVLGSAGHL 281
P+ TFL V ACAS A+ G +++ I KN G V + + +II + G
Sbjct: 356 VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCG-C 414
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+E E V R ++ W A+ + ++G E
Sbjct: 415 VEVAEQVFRSMGSRSLASWNAMISGLAMNGHAE 447
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY---GKCCNTRL----- 181
F SL SC K+ K++H A ++ LI MY G+ + RL
Sbjct: 129 TFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKS 188
Query: 182 -----------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
AR++FD++ +++ SW+ MI+GY +G+ + L F
Sbjct: 189 TLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFT 248
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+M++ P++ T + V +AC +++ G + D G ++ A++ +
Sbjct: 249 RMQEADVSPNQSTMVSVLSACGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKC 307
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G + A + + M + V +W +
Sbjct: 308 GEIGTARKLFDGME-DKDVILWNTM 331
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLR 190
+LL C ++ S+ K++H L+ S + +KLIE + L A +F +
Sbjct: 30 NLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIH 86
Query: 191 KR--NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ N+ W+ +I ++ L LF QM +G +P+ TF +F +CA ++A E
Sbjct: 87 HQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEA 146
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ +K + P + + ++I + G L A R+ F+ + + +A+ A
Sbjct: 147 KQLHAHALKLALHLHPHV--HTSLIHMYSQVGELRHA-----RLVFDKST-LRDAVSFTA 198
Query: 308 QIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRG 367
I G V G +D ++ + D+IP A +++ ++ Y + G
Sbjct: 199 LITGYVS--------EGHVDDARRLFDEIP--------AKDVVSWNAMIAGYVQS----G 238
Query: 368 EYEKMKGLNGQMREAGYVPD 387
+E+ +M+EA P+
Sbjct: 239 RFEEALACFTRMQEADVSPN 258
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 220/378 (58%), Gaps = 32/378 (8%)
Query: 130 VFSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+S++ +C +L +I GK +H + D+ + + L++MY KC L+R+VF++
Sbjct: 319 TMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNE 378
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQM-----RKTGPHPDKETFLVVFAACASAE 243
+ +N+ +W+++I +G+G + L LF+ M R P++ TF+ VFAAC+ +
Sbjct: 379 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEVWEA 302
+ EG F MK+D+G+ P +HY ++ +LG AG L EA E V MP E V W +
Sbjct: 439 LISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSS 498
Query: 303 LRNFAQIHGDVELEDRAEELLGDLDPSKA--------IVDKIPLPPR------------- 341
L +IH +VEL + A + L L+P+ A I L +
Sbjct: 499 LLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGV 558
Query: 342 KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDE 397
KK+ + +E ++ V + + D+ + E++ G L+ +MR+ GYVPDT VLH++DE
Sbjct: 559 KKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDE 618
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 457
+ KE L HSE+LAIA+G+++TPP +R+ KNLR+C DCH A K +SKI+ RE+IVRD
Sbjct: 619 DEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRD 678
Query: 458 NKRFHHFRDGKCSCGDYW 475
+RFHHF++G CSCGDYW
Sbjct: 679 VRRFHHFKEGTCSCGDYW 696
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+S+L +C +L+ +++GK +H +LR + +++ + + L++MY C R+VFD
Sbjct: 216 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 275
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACA-SAEAVK 246
+ R + W+ MISGYA NG L+LF +M K G P+ T V AC S A+
Sbjct: 276 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIA 335
Query: 247 EGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+G ++ ++N + I A++ + G L + MP V W L
Sbjct: 336 KGKEIHAYAIRN--MLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIM 392
Query: 306 FAQIHGDVE 314
+HG E
Sbjct: 393 ACGMHGKGE 401
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 23/207 (11%)
Query: 65 QRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASA 124
Q P + Q+P S+ P + S L S + REAI + +
Sbjct: 27 QTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVS 86
Query: 125 SAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKC----- 176
A D F ++L + L+ ++ G+++H + V + N L+ MYGKC
Sbjct: 87 GARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD 146
Query: 177 ---CNTRL------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
N L ++ +F+ R++ SW+ MIS ++ + + ++ L F M
Sbjct: 147 KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV 206
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
G D T V AC+ E + G
Sbjct: 207 LEGVELDGVTIASVLPACSHLERLDVG 233
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 210/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S L +C L ++ G++VH +LR + + N LI+MY K + A+ VFD +
Sbjct: 616 LSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNM 675
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW +++GY +G+G D L +F++MRK PD TFLVV AC+ + V G
Sbjct: 676 PQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGI 735
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M D+G+ PG EHY ++ + G AG L EA + + MP EPT VW AL + ++
Sbjct: 736 NFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRL 795
Query: 310 HGDVELEDRAEELLGDL----DPSKAIVDKIPLPPR-----------------KKQSATN 348
H +VEL + A L +L D S ++ I R KK+ +
Sbjct: 796 HSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCS 855
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ + V+ + RS + YE + L +++ GYVP T + LHD+D+E K L
Sbjct: 856 WIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLL 915
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+AYG+++ PR P+RI KNLRICGDCH+AI +SKI+ E+I+RD+ RFHHF
Sbjct: 916 FEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHF 975
Query: 465 RDGKCSCGDYW 475
++G CSC YW
Sbjct: 976 KNGSCSCKGYW 986
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 31/251 (12%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVH--------ELLRT 156
+ G+ EA++ Q D + SLL +C ++ ++ GK H L
Sbjct: 477 QRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGP 536
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYAANGQGADGL 214
D+++ N LI+MY KC +T +ARK+FD + + R++ +W +MI GYA +G + L
Sbjct: 537 DPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNAL 596
Query: 215 MLFEQMRKTGP--HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA- 270
LF M K P+ T ACA A++ G ++ +++N YG + ++A
Sbjct: 597 QLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG---SVMLFVAN 653
Query: 271 -IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS 329
+I + +G + A+ + MP V W +L +HG R E+ L D
Sbjct: 654 CLIDMYSKSGDVDTAQIVFDNMPQRNAVS-WTSLMTGYGMHG------RGEDALRVFDEM 706
Query: 330 KAIVDKIPLPP 340
+ K+PL P
Sbjct: 707 R----KVPLVP 713
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
DV S ++L +C +L + G++VH S V DV + N +++MY KC A KVF
Sbjct: 363 DVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVF 422
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+++ +++ SW+ M++GY+ G+ L LFE+M + D T+ V A
Sbjct: 423 QRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGC 482
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
E F M D G P + ++++ S G L+ +E
Sbjct: 483 EALDVFRQM-CDCGSRPNVVTLVSLLSACVSVGALLHGKE 521
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +C NL S+ +G +H + S F +V + N ++ MYGKC R A +FD L
Sbjct: 262 FPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLC 321
Query: 191 KR---NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH---PDKETFLVVFAACASAEA 244
R +L SW+ ++S Y L LF +M T H PD + + + ACAS A
Sbjct: 322 HRGIQDLVSWNSVVSAYMWASDANTALALFHKM--TTRHLMSPDVISLVNILPACASLAA 379
Query: 245 VKEGFLY--FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
G F I G+V + A++ + G + EA + +RM F+ V W A
Sbjct: 380 SLRGRQVHGFSIRS---GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS-WNA 435
Query: 303 L 303
+
Sbjct: 436 M 436
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C NL E+GK++H ++ T + + ++N LI+MY KC + A+ +F ++
Sbjct: 241 VLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEM 300
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ SW +I G A +GQ + L L+++M G P++ TF+ + AC+ A V +G
Sbjct: 301 CRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGR 360
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M D+GI P ++HY ++ + +GHL EAE + MP P W AL + +
Sbjct: 361 TLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKR 420
Query: 310 HGDVELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSATN-----MLEEKNRVSDYR 360
HG+ ++ R + L +L P S ++ I + + M E + Y
Sbjct: 421 HGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYS 480
Query: 361 STDL-------YRGEYEK---------MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
DL Y GE M+ L+ +MR+ GY PDT VLHD+D++ KE+ L
Sbjct: 481 CIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQL 540
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+AYGL+ P +RI+KNLR+CGDCH +K++S I RE+ VRD KR+HHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHF 600
Query: 465 RDGKCSCGDYW 475
+DG CSC D+W
Sbjct: 601 KDGNCSCNDFW 611
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 130 VFSSLLDSCGNLK--SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
VF+SL+ +C NL ++ GK+VH S F D + + LI+MY K R VFD
Sbjct: 106 VFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFD 165
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+ N SW MISGYA +G+ + LF Q
Sbjct: 166 SISSLNSISWTTMISGYARSGRKFEAFRLFRQ 197
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+ K++H + + + + N L+ YGKC + A ++FD L +R+ +W +++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA--VKEG 248
+ + L + + TG HPD F + ACA+ VK+G
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQG 125
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 216/375 (57%), Gaps = 33/375 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C +L ++ GK +H + V + + L++MY KC LAR+VFDQ+ R
Sbjct: 441 TVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR 500
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH-----PDKETFLVVFAACASAEAVKE 247
N+ +W+++I Y +G+G + L LFE M G P + TF+ +FA+C+ + V E
Sbjct: 501 NVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDE 560
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP--FEPTVEVWEALRN 305
G F MKN++GI P +HY I+ ++G AG + EA V MP F+ V W +L
Sbjct: 561 GLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDK-VGAWSSLLG 619
Query: 306 FAQIHGDVELEDRAEELLGDLDP--------------SKAIVDK-IPLPPR------KKQ 344
+I+ ++E+ + A E L L P S + DK + L R KK+
Sbjct: 620 ACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKE 679
Query: 345 SATNMLEEKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ +E + V + + DL + EK+ + L+ ++++ GYVPDT VLHDIDEE K
Sbjct: 680 PGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEK 739
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E L HSE+LAIA+G+++TPP +R+ KNLR+C DCH A K +SKI RE+I+RD +R
Sbjct: 740 ETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARR 799
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+DG CSCGDYW
Sbjct: 800 FHHFKDGTCSCGDYW 814
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F+S+L +C +L + GK +H LRT +++ + + L++MY C R VFD
Sbjct: 218 TFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDS 277
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAV-- 245
+ R + W+ MI+GYA + LMLF +M G + + T + A E +
Sbjct: 278 VLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR 337
Query: 246 KEG 248
KEG
Sbjct: 338 KEG 340
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT- 223
L N LI+MY + + + ++++FD + R++ SW+ +I+ Y G+ +D L+L +M++
Sbjct: 356 LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIE 415
Query: 224 ------GPH---------PDKETFLVVFAACASAEAVKEG 248
G + P+ T + V CAS A+ +G
Sbjct: 416 EKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKG 455
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF--VKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F ++L + ++ + +GK++H + + V ++N L+ MYGKC A KVFD+
Sbjct: 13 FPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDR 72
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ +R+ SW+ +IS + + F M G P T + + AC++
Sbjct: 73 ITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 125
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 133 SLLDSCGNLK---SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S+ +C NL+ + +GK++H + NN L+ MY K A+ +
Sbjct: 118 SMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLF 176
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+L +W+ MIS ++ N + + LM M G PD TF V AC+ + ++ G
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTG 235
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 217/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S++L +C + +I+ GKR+H + +V + +++MY KC +A K F +++
Sbjct: 299 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIK 358
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N+ SW MI+GY +G G + L +F MRK+G P+ TF+ V AAC+ A + EG
Sbjct: 359 GKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRY 418
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ MK ++GI PG+EHY ++ +LG AG L EA ++ M +P +W AL + +I+
Sbjct: 419 WYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIY 478
Query: 311 GDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATNM 349
+VEL E L +LD + + V+++ + + +K +
Sbjct: 479 KNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSS 538
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K + + +S Y+ Y ++ L ++ +AGYVP+T VLHD+D E +E L+
Sbjct: 539 VELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLR 598
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+ L+++ + +IKNLR+C DCH AIKI++K+ GRE+I+RD KRFHHF+
Sbjct: 599 IHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFK 658
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 659 DGLCSCGDYW 668
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAAN 207
+H L+ + N +I+ Y K L ARK+FD + R++ SW+ MI+ YA N
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQN 272
Query: 208 GQGADGLMLFEQMRKTGP--HPDKETFLVVFAACASAEAVKEG 248
G + L L+ +M G + T V ACA A A++ G
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTG 315
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 33/372 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L SCG + ++E GK VH + + +V + L++MY KC + ARKVFD + +
Sbjct: 261 AVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGK 320
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ MI GY +G + L LF +M G P TF+ V ACA A V +G+ F
Sbjct: 321 DVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVF 380
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ MK+ YG+ P +EHY ++ +LG AG + EA + V M EP +W L +IH +
Sbjct: 381 DSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSN 440
Query: 313 VEL-EDRAEELLGDLDPSKA---IVDKIPLPPR-----------------KKQSATNMLE 351
V L E+ AE L+ + S ++ + R +K+ + +E
Sbjct: 441 VSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIE 500
Query: 352 EKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
KNRV ++ RS D+Y ++ +NG ++E Y P T VLHDI E+ KE++
Sbjct: 501 VKNRVHEFVAGDRRHPRSKDIY----SMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQS 556
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+ HSE+LA+A+GLIST P ++I+KNLR+C DCH +KIMSKI GR++I+RD RFHH
Sbjct: 557 LEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHH 616
Query: 464 FRDGKCSCGDYW 475
F +G CSC DYW
Sbjct: 617 FENGSCSCRDYW 628
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 47/234 (20%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SSLL +C ++ + VH + ++ L++ Y + + A+K+FD +
Sbjct: 124 LSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMP 179
Query: 191 KRNLSS-------------------------------WHLMISGYAANGQGADGLMLFEQ 219
+R+L S W++MI GYA +G + L+ F +
Sbjct: 180 ERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRK 239
Query: 220 MRKTGP-------HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
M P++ T + V ++C A++ G ++N+ GI + A++
Sbjct: 240 MMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENN-GIKVNVRVGTALV 298
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
+ G L +A + + M + V W ++ IHG D A +L ++
Sbjct: 299 DMYCKCGSLEDARKVFDVMEGKDVV-AWNSMIMGYGIHG---FSDEALQLFHEM 348
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 206/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++++GK +H +R + + L N L +MY KC A+ VF ++ +R
Sbjct: 265 SVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER 324
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW ++I G A G + F +M + G P+ +F+ + AC A V +G YF
Sbjct: 325 DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYF 384
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++M YGI P IEHY ++ +L AG L +AE + MP +P V VW AL +I+ D
Sbjct: 385 DMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKD 444
Query: 313 VELEDRAE----EL-----------------LGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
E +R EL +G LD + + ++ K + +E
Sbjct: 445 AERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIE 504
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N V ++ D + Y ++ L +M+ AGY P T V+H+IDEE KE AL H
Sbjct: 505 INNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTH 564
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLI+T +RI+KNLR+C DCH+AIKI+SKIV RE++VRD RFHHF+DG
Sbjct: 565 SEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDG 624
Query: 468 KCSCGDYW 475
KCSC DYW
Sbjct: 625 KCSCNDYW 632
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L +C L + G++VH + ++ + N L+++Y K +A+K+FD++
Sbjct: 130 FTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV 189
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW+ +ISGY +G M+F+ M + + ++ + + A E +
Sbjct: 190 VRDVVSWNTLISGYCFSGMVDKARMVFDGMME----KNLVSWSTMISGYARNEKYADAIE 245
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL--IEAEEFVERMPFEPTVEVWEALRN 305
F M+++ G+ P + + ++ VL + HL ++ +++ R +EV L N
Sbjct: 246 LFRQMQHEGGLAP---NDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGN 299
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 210/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ +L +C +L + + G+ +H + + + D + N L++MY KC LAR +FD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITS 562
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++L SW +MI+GY +G G + + LF QMR+ G PD+ +F+ + AC+ + V EG+ +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRF 622
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F IM+++ I P +EHY I+ +L G+L +A F+E MP P +W AL +IH
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
DV+L +R E + +L+P K + +I +K + +
Sbjct: 683 DVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWI 742
Query: 351 EEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E K RV+ + + D E EK ++G+ +M E GY P T+Y L D +E KE+AL
Sbjct: 743 EIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 802
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A G+IS+ +R+ KNLR+CGDCH K MSK+ RE+++RD+ RFH F+D
Sbjct: 803 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 862
Query: 467 GKCSCGDYW 475
G CSC +W
Sbjct: 863 GHCSCRGFW 871
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+EG EA++ + DV++ ++L+ C + ++ GKRVHE ++ + D+
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIF 433
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KT 223
++N L++MY KC + R A VF ++R +++ SW+ +I GY+ N + L LF + +
Sbjct: 434 VSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEK 493
Query: 224 GPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
PD+ T V ACAS A +G ++ IM+N Y
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L K G +I + S+ D FS + S +L+S+ G+++H + S F +
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGER 229
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N L+ Y K ARKVFD++ +R++ SW+ +I+GY +NG GL +F QM
Sbjct: 230 NSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLF 289
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
+G D T + VFA CA + + G
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLG 315
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+ C + + I +G+ VH + F ++ N L++MY KC + A+ VF ++ R
Sbjct: 301 SVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGR 360
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ S+ MI+GYA G + + LFE+M + G PD T V CA + EG
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH 420
Query: 253 EIMK-NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E +K ND G + + A++ + G + EAE M + + W +
Sbjct: 421 EWIKENDMGFDIFVSN--ALMDMYAKCGSMREAELVFSEMRVKDIIS-WNTV 469
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 99 DVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
+ L C+ G ++ A++ + S+L C + KS++ GK V +R +
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNG 124
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
FV D L +KL MY C + + A +VFDQ++ W+++++ A +G + + LF+
Sbjct: 125 FVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYG 260
+M +G D TF V + +S +V G L+ I+K+ +G
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFG 227
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 208/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS + SC L + G++ H L F + N LI MY KC A++VF +
Sbjct: 420 FSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP 479
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ +I+ +G G + + ++E+M K G PD+ TFL V AC+ A V +G
Sbjct: 480 CLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK 539
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M+ Y I PG +HY +I +L +G EAE +E +PF+PT E+WEAL + ++H
Sbjct: 540 YFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVH 599
Query: 311 GDVEL--------------EDRAEELLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
G++EL D LL ++ + +++ + KK+ A +
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA-KEKAL 404
+E + +V + D E Y+ ++ L +MR GYVPDT +VLHD++ + KE L
Sbjct: 660 IEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDML 719
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+GL+ PP +RI KNLR CGDCHN + +SK+V R++I+RD KRFHHF
Sbjct: 720 TTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHF 779
Query: 465 RDGKCSCGDYW 475
R+G+CSCG++W
Sbjct: 780 RNGECSCGNFW 790
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 39/267 (14%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKR 149
N +L + + + G +EA+E + + S+ D F+ S++ +C N + +++GK+
Sbjct: 248 NMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ 307
Query: 150 VHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY---- 204
VH +LR F +N L+ +Y KC AR +F+++ ++L SW+ ++SGY
Sbjct: 308 VHAYVLRREDF--SFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 205 ---------------------------AANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
A NG G +GL LF M++ G P F
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
+CA A G F G + A+I + G + EA++ MP +V
Sbjct: 426 SCAVLGAYCNG-QQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484
Query: 298 EVWEALRNFAQIHG-DVELEDRAEELL 323
W AL HG VE D EE+L
Sbjct: 485 S-WNALIAALGQHGHGVEAVDVYEEML 510
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 45/178 (25%)
Query: 165 LNNKLIEMYGKCCNT----RLARKVFDQLRKRNLSSWHLMISGYAANG---------QGA 211
++N L+ +Y +C ++ ARKVFD + +++ SW M++GY NG +G
Sbjct: 186 VSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGM 245
Query: 212 D-----------------------GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
D L + +M +G D+ T+ V ACA+A ++ G
Sbjct: 246 DENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLG 305
Query: 249 --FLYFEIMKNDYGIVPGIEHYI-AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + + D+ H+ +++ + G EA E+MP + V W AL
Sbjct: 306 KQVHAYVLRREDFSF-----HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVS-WNAL 357
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
S+++ + VH + T F + N+LI++Y K AR++FD++ + + + M+S
Sbjct: 29 SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88
Query: 203 GYAANGQGADGLMLFEQ----MRKT 223
GY A+G A +FE+ MR T
Sbjct: 89 GYCASGDIALARSVFEETPVSMRDT 113
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 207/374 (55%), Gaps = 26/374 (6%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y S+L C L ++ G+ VH + +F DV + LI MY KC N A++VF
Sbjct: 333 YPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFH 392
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+++ W+ MI+GYA +G G L +F MR G PD T++ AC+ VKE
Sbjct: 393 TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKE 452
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F M + I PG EHY ++ +LG +G + EA + ++ MP EP +W AL
Sbjct: 453 GREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM-------------- 349
++H + E+ + A + L +L+P A ++ I + + A+ M
Sbjct: 513 RMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPG 572
Query: 350 ---LEEKNRVSDYRSTDL-----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+E RV + S D+ + ++ L+G + E+GY D +VLHDIDEE K
Sbjct: 573 CSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKS 632
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+L+YHSER A+AYGL+ P MP+R++KNLR+CGDCH+AIK+++KI RE+I+RD RF
Sbjct: 633 HSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRF 692
Query: 462 HHFRDGKCSCGDYW 475
HHF+DG CSC DYW
Sbjct: 693 HHFKDGFCSCRDYW 706
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD++ R++ +W M+SGY G+ + LF++M P + ++ + + A
Sbjct: 162 ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM----PKRNVVSWTAMISGYAQ 217
Query: 242 AEAVKEGFLYFEIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
V FE+M +N+ + YI AGH+ +A E MP P
Sbjct: 218 NGEVNLARKLFEVMPERNEVSWTAMLVGYI-------QAGHVEDAAELFNAMPEHPVAAC 270
Query: 300 WEALRNFAQ 308
+ F Q
Sbjct: 271 NAMMVGFGQ 279
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAA 206
RV+E R + D ++ + G C R+ AR +FD++ KRN+ SW MISGYA
Sbjct: 158 RVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ 217
Query: 207 NGQGADGLMLFEQM 220
NG+ LFE M
Sbjct: 218 NGEVNLARKLFEVM 231
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 214/369 (57%), Gaps = 30/369 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L CG+L S++ G++VH L S F D+ +++ LI MY KC + A++VFD+ +
Sbjct: 202 SVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSK 261
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +I+GYA +G G L +F M + PD+ TF+ V +AC+ VKEG F
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF 321
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E MK+ Y + P EHY ++ +LG AG L EA +E MP E VW AL + H +
Sbjct: 322 ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKN 381
Query: 313 VELEDRAEELLGDLDPSKA---------------IVDKIPLPPRKKQSATNMLEEK--NR 355
++L + A + L L+P+ A D + L RK A N+ + +
Sbjct: 382 LDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVEL--RKTMRAKNLRKSPGCSW 439
Query: 356 VSDYRSTDLYRG-------EYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+ + ++ G E+E K+ L +REAGY PD +V+HD+DEE K +L
Sbjct: 440 IEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSL 499
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+ HSE+LA+AYGL+ P MP+R++KNLR+CGD H+ IK+++++ GRE+I+RD RFHHF
Sbjct: 500 RDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHF 559
Query: 465 RDGKCSCGD 473
+DG CSC D
Sbjct: 560 KDGLCSCSD 568
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 160 VKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISG-------------Y 204
VKDV + +I+ G C RL AR++FD++ +RN+ +W MISG Y
Sbjct: 115 VKDVVASTNMID--GLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIY 172
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVP 263
G + L LF M++ G P + + V + C S ++ G ++ +++++ +
Sbjct: 173 ERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQF---- 228
Query: 264 GIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
I+ Y++ +I + G L+ A+ +R + V + +AQ HG ++A E
Sbjct: 229 DIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQ-HG---FGEKALE 284
Query: 322 LLGDLDPSKAIVDKIPL 338
+ D+ S D+I
Sbjct: 285 VFHDMFSSSIAPDEITF 301
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 33/151 (21%)
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG--------------- 224
R ARK+FD++ + N SW+ ++SGY NG ++ +F++M +
Sbjct: 11 REARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEG 70
Query: 225 ------------PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
P + ++ V+ V E F++M V + +I
Sbjct: 71 LIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMP-----VKDVVASTNMI 125
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L S G LIEA E + MP + V W ++
Sbjct: 126 DGLCSEGRLIEAREIFDEMP-QRNVVAWTSM 155
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 209/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C + ++ +GKR H + +++ +N L+++Y +C A+ +FD++ +
Sbjct: 227 SLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEGFLY 251
N SW +I G A NG G + + LF+ M K G P + TF+ + AC+ VKEGF Y
Sbjct: 287 NSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEY 346
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M +Y I P IEH+ ++ +L AG + +A E++ +MP +P V +W L +HG
Sbjct: 347 FRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHG 406
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
D +L + A + L+P+ + I ++ +K +++
Sbjct: 407 DSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLV 466
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E NRV ++ D + Y K+K + ++R GYVP V D++EE KE AL Y
Sbjct: 467 EVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVY 526
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE++AIA+ LISTP R P+R++KNL++C DCH AIK++SK+ RE++VRD RFHHF++
Sbjct: 527 HSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKN 586
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 587 GSCSCQDYW 595
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIE 145
N +RG A++ + V+ +SL +E + +E + LL + G + +
Sbjct: 89 NTLIRGYAEIGN-SVSAVSLYREMRASGFVE---------PDTHTYPFLLKAVGKMADVR 138
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G+ +H ++ S F + + N L+ +Y C + A KVFD++ +++L +W+ +I+G+A
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
NG+ + L L+ +M G PD T + + +ACA A+ G F + G+ +
Sbjct: 199 ENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLG-KRFHVYMIKVGLTRNL 257
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
++ + G + EA+ + M + +V W +L ++G L A EL +
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSLIVGLAVNG---LGKEAIELFKN 313
Query: 326 LDPSKAIV 333
++ + ++
Sbjct: 314 MESKEGLL 321
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 134 LLDSCGNL------KSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCN---TRLAR 183
+++ C NL S+ +++H +R + D EL LI + A
Sbjct: 14 MVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 184 KVFDQLRKR-NLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACAS 241
KVF ++ K N+ W+ +I GYA G + L+ +MR +G PD T+ + A
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGK 133
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
V+ G ++ ++++ +G + +++ +++ + + G + A + ++MP E + W
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQN--SLLHLYANCGDVASAYKVFDKMP-EKDLVAW 190
Query: 301 EALRN-FAQ 308
++ N FA+
Sbjct: 191 NSVINGFAE 199
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 211/372 (56%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKCCNTRLARKVFDQ 188
++ + LD+C +L ++ G+++H + + +DV L N ++ MYG+C + R AR FD
Sbjct: 434 LYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDG 493
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R+ SW+ M+S A +G+ D LF M + G ++ FL + +ACA A VK G
Sbjct: 494 MPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAG 553
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+F M D+G+VP EHY ++ +LG G L +A V+ MP P W AL +
Sbjct: 554 CEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACR 613
Query: 309 IHGDVE---------LEDRAEELL------------GDLDPSKAIVDKIPLPPRKKQSAT 347
I+GD E LE RA+ G D + A+ + +K
Sbjct: 614 IYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGV 673
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E +++V ++ RS Y +++ + G + AGY T VLHD++EE KE+
Sbjct: 674 SSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQL 733
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L++HSE+LAIA+G++STP LR+IKNLR+C DCHNA K +SK+ GRE++VRD +RFHH
Sbjct: 734 LRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHH 793
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 794 FKDGACSCGDYW 805
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF S+L +C + + + G+ +H + + + L+ MYG+C + R A +F L
Sbjct: 130 VFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL 189
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R ++ W+ MI+ + NG + L +F +M + G PD TF+ VF AC+S+ +++
Sbjct: 190 ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRAS 249
Query: 249 FLY-FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
+ F ++ G+ + A++ G + A +F MP V + F
Sbjct: 250 QVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFT 309
Query: 308 QIHGDVELEDRAEELLGDLDPSKAIV 333
QI + +E LL + P+++ +
Sbjct: 310 QIGHLLAVETFHAMLLEGVVPTRSTL 335
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 143 SIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
SI GK +H + +S + +D L + L+ MY +C + A VF ++ +++ W ++I
Sbjct: 41 SIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLI 100
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
S Y + G A + LF ++ + G D F+ V +AC+S E + G L I +
Sbjct: 101 SAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRL---IHRCAVEA 157
Query: 262 VPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G++ + A++ + G G L +A + V +W A+
Sbjct: 158 GLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 12/185 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L+ C +L+ + + V + + V DV + L+ Y +C A +VF R
Sbjct: 339 LEGCEDLR---VARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFS---AREE 392
Query: 195 SSWHL-----MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
W MI+ YA L+ + G PD+ ++ ACAS A+ EG
Sbjct: 393 GEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGR 452
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ D + + AI+ + G G L +A + + MP + W A+ + +
Sbjct: 453 QIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQ 511
Query: 310 HGDVE 314
HG VE
Sbjct: 512 HGRVE 516
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 209/383 (54%), Gaps = 25/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++A+ SS+L C NL ++ GK++H+ +++ + L+ MY KC
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCG 290
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A +F ++ R++ +W+ MISGYA +G G + + LFE+M+ G P+ TF+VV
Sbjct: 291 DLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLT 350
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC G FE M+ YGI P ++HY ++ +L AG L A +F+ MPFEP
Sbjct: 351 ACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHP 410
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV--------------DKIPLPPRKK 343
+ L +++ ++E + A L + DP A D + R
Sbjct: 411 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWM 470
Query: 344 QSAT-------NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVL 392
+ T + +E K + ++RS D + +EK+ L +M+E GYVPD +VL
Sbjct: 471 KDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVL 530
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+DE K + L HSE+LAIA+GLIST M LRI KNLR+CGDCHNA K++S I RE
Sbjct: 531 HDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHNAAKVISMIEDRE 590
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+I+RD RFHHFR G CSC DYW
Sbjct: 591 IILRDTTRFHHFRGGHCSCDDYW 613
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREA-IEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
P+R + S + + L K G V EA + ++ S ++ S G++ + E
Sbjct: 107 PVR---DVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAE- 162
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
E R + +D L ++ Y N A K F+ + RNL SW+ +++GY
Sbjct: 163 -----EWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVK 217
Query: 207 NGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
N D L LF M R+ P+ T V C++ A+ G
Sbjct: 218 NSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 260
>gi|297823223|ref|XP_002879494.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325333|gb|EFH55753.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 252/478 (52%), Gaps = 50/478 (10%)
Query: 18 SSNFNSKI-SHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPK 76
S FNS+ SH + ++T SS +L ++N FV+ +R S
Sbjct: 26 SRCFNSRAQSHDLITKTIT---SSLQDVL------TRPTWQNRSFVQCRRVSS------- 69
Query: 77 TGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSL 134
H+Q D + +E D +LC+E K+REA+E + +D + L
Sbjct: 70 ----HAQMAYD--HQSVTIEKFD----ALCEEVKIREALEVVDILEDNGYVVDFPRILGL 119
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
CG ++++E + VH+ + D + +IEMY C +T A KVFD++ +RN
Sbjct: 120 AKLCGEVEALEEARVVHDCITP----LDARSYHTVIEMYSGCGSTYDALKVFDEMPERNS 175
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W +M+ A NG+G + +F ++ G PDKE F VF AC S + EG L+FE
Sbjct: 176 ETWCIMMRCLAKNGEGERAVDMFTSFKEEGNKPDKEIFKAVFFACVSLGDINEGLLHFES 235
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M +YGI+P +E Y+ + ++L + GHL EA EFVERM EP+VE+WE L N +HGD+E
Sbjct: 236 MYRNYGIIPCMEDYVIVTEMLAACGHLDEALEFVERMTVEPSVEMWETLMNLCWVHGDLE 295
Query: 315 LEDRAEELLGDLDPSKAIVDKIP--LPPRKKQSATNMLEE-----------KNRVSDYRS 361
L DR EL+ LD S+ + + ++ S L+E K R+ +R+
Sbjct: 296 LGDRFAELVKKLDASRMNKESNAGLVAAKESDSTKEKLKELRYCQMMRDDPKLRICQFRA 355
Query: 362 TDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
D + ++ ++ L QM + G+ P TR L +++E KE+ L + S +LA AY L
Sbjct: 356 GDTSHRKNDETVAALRSLKVQMLDMGFFPATRVCLEKVEKEEKEEQLLFRSNKLAFAYAL 415
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ + R P + +++R C D HN K++S I GREL RD KRFHH+R+G CSC DYW
Sbjct: 416 LHSKARKPFTVTQDMRTCIDGHNTFKMISLITGRELTQRDQKRFHHYRNGVCSCRDYW 473
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 220/373 (58%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+++L +C ++ ++E G VH + DV + + L++MY KC A + F+ +
Sbjct: 542 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 601
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN+ SW+ MISGYA +G G L LF +M G PD TF+ V +AC+ V+EGF
Sbjct: 602 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF 661
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFAQ 308
+F+ M Y + P +EH+ ++ +LG AG L E +F+ MP +P V +W L +
Sbjct: 662 EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCR 721
Query: 309 IHG-DVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSA 346
+G + EL RA E+L +L+P A+ V K + KK++
Sbjct: 722 ANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAG 781
Query: 347 TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ + K+ V + + D E Y+K++ LN +MR+AGY+P T+Y L D++ E KE+
Sbjct: 782 CSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEE 841
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L YHSE++A+A+ +++ +P+RI+KNLR+CGDCH+A +SKIVGR++++RD+ RFH
Sbjct: 842 LLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFH 900
Query: 463 HFRDGKCSCGDYW 475
HF DGKCSCGDYW
Sbjct: 901 HFEDGKCSCGDYW 913
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 108 EGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
E V +A++Y Q G F ++L + +L E+ ++H L+ D +
Sbjct: 416 EASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAI 475
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N L+ YGKC K+F ++ + R+ SW+ MISGY N + L M + G
Sbjct: 476 GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKG 535
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGH 280
D TF + +ACAS ++ G E+ + GI +E + A++ + G
Sbjct: 536 QRLDSFTFATILSACASVATLERG---MEV--HACGIRACLESDVVVGSALVDMYSKCGR 590
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A F E MP V W ++ + HG E
Sbjct: 591 IDYASRFFELMPLR-NVYSWNSMISGYARHGHGE 623
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ F SL++ E + +H FV ++ L+N LI +Y + + A+K+FD+
Sbjct: 100 ETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDE 159
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ RNL +W +ISGY NG+ + F M + G P+ F AC
Sbjct: 160 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 210
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 131 FSSLLDSC--GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFD 187
F S L +C ++G ++H L+ + + DV + N LI MYG C ++ AR VFD
Sbjct: 203 FGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 262
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ RN SW+ +IS Y+ G LF M+K G
Sbjct: 263 GIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEG 299
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 115 IEYMGQDASASAGYDVFSSLL-----------DSCGNLKSIEMGKR----VH-ELLRTSA 158
I + A + YD+FSS+ D+ +E G+R VH ++RT
Sbjct: 276 ISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGL 335
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
V + N L+ MY K A VF+ + +++ SW+ +ISG N D +F
Sbjct: 336 NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFS 395
Query: 219 QMRKTGPHPDKETFLVVFAACASAEA-VKEGFLYF-EIMKNDYGI 261
M P D+ ++ V A + +EA V + YF ++M+ +G+
Sbjct: 396 LM----PEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 436
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 213/363 (58%), Gaps = 26/363 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SS+L +C ++ ++E GK VH + S + N L++MY K + A++VFD+L
Sbjct: 292 TYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL 351
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K ++ SW+ M++G A +G G + L FEQM + G P++ +FL V AC+ + + EG
Sbjct: 352 VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL 411
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE+MK Y + P + HY+ + +LG G L AE F+ MP EPT VW AL ++
Sbjct: 412 YYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRM 470
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
H ++EL A E +LDP + + + KKQ A +
Sbjct: 471 HKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N V + + D ++++G ++G+++E GYVPDT +VL +D++ +E+ L
Sbjct: 531 WVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKL 590
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
QYHSE+LA+A+ L++TP P+RI KN+R+CGDCH AIK +SK+V RE+IVRD RFH F
Sbjct: 591 QYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRF 650
Query: 465 RDG 467
RDG
Sbjct: 651 RDG 653
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD-VELNNKLIEMYGKCCN 178
Q S Y+++S LL C L +E G+ VH L S F+ + + L N ++ MY KC
Sbjct: 79 QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGC 138
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
AR++FD++ +++ +W +I+G++ N + D L+LF QM + G P+ T + A
Sbjct: 139 LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKA 198
Query: 239 CASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
S + G L+ +K YG + A++ + GH+ A+ + MP + V
Sbjct: 199 SGSEHGLDPGTQLHAFCLK--YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 298 EVWEAL 303
W AL
Sbjct: 257 S-WNAL 261
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SSLL + G+ ++ G ++H + V + + L++MY +C + A+ FD +
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
++ SW+ +ISG+A G+G L L +M++ P T+ V +ACAS A+++G
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ ++ I + ++ + AG + +A+ +R+ +P V W +
Sbjct: 311 WVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCA 367
Query: 309 IHG-DVELEDRAEELL 323
HG E DR E++L
Sbjct: 368 QHGLGKETLDRFEQML 383
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 199/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F+ DV N L+ Y KC + A F L
Sbjct: 509 VLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGL 568
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ + SW MI G A +G G L +F +M P+ T V AC A V E
Sbjct: 569 PDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK 628
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI EHY +I +LG AG L +A E V MPFE VW AL +++
Sbjct: 629 GYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRV 688
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H D EL A E L L+P K A V K+ + KK+ A +
Sbjct: 689 HRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMS 748
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K+RV + +S R Y K++ L M +AGYVP+ LHD+D+ KE L
Sbjct: 749 WVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLL 808
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ LISTP P+R+ KNLRIC DCH A K +SKIV RE+I+RD RFHHF
Sbjct: 809 SHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHF 868
Query: 465 RDGKCSCGDYW 475
DG CSCGDYW
Sbjct: 869 SDGACSCGDYW 879
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C + +E G++VH ++ + + KDV N L++MY K + +A VF ++
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP 264
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
K ++ SW+ ISG +G L L QM+ +G P+ T
Sbjct: 265 KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L S +L++I +VH L F+ D + N LI+ Y KC R A KVF++
Sbjct: 409 LAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHS 468
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ ++ MI+ + G D + LF +M + G PD + ACAS A ++G
Sbjct: 469 SDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 526
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ-LRKRNLSSWHLMISGY 204
+G +VH + ++ D+ + N L+ MYG AR+VFD+ R RN SW+ M+S +
Sbjct: 118 LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAF 177
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N + +D + LF +M +G P++ F V AC + ++ G
Sbjct: 178 VKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAG 221
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+++H + + D + L++MY K ARKVF+ + +++L W+ +ISG +
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
G + L LF +MRK G ++ T V + AS EA+ +
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISD 424
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S LL +S+ +G +H L S + N L+ Y KC AR+VFD+
Sbjct: 8 SPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPD 65
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
SW +++ Y+ N + L F MR G
Sbjct: 66 PCHVSWSSLVTAYSNNALPREALAAFRAMRARG 98
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/374 (39%), Positives = 211/374 (56%), Gaps = 29/374 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + +C NL S +GK+VH L +++ V +NN L+ MY KC N AR+VFD +
Sbjct: 349 FVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N+ S + MI+GYA +G + L LFE M + P+ TF+ V +AC V+EG
Sbjct: 409 PEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQ 468
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK + I P EHY +I +LG AG L EAE +E MPF P W L +
Sbjct: 469 KYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRK 528
Query: 310 HGDVELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSAT----------------N 348
HG+VEL +A L+P A + + R +++AT +
Sbjct: 529 HGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCS 588
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKGLNGQ----MREAGYVPDTRYVL---HDIDEEAKE 401
+E +V + + D +++ G+ M++AGYVPD R+ L +++ + KE
Sbjct: 589 WIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKE 648
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+ L YHSE+LA+A+GLIST +P+ ++KNLRICGDCHNAIK++S I GRE+ VRD RF
Sbjct: 649 RRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRF 708
Query: 462 HHFRDGKCSCGDYW 475
H F++G CSCGDYW
Sbjct: 709 HCFKEGHCSCGDYW 722
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 37/268 (13%)
Query: 113 EAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EA+E + D+F+ S+L + +K + G + H ++ S F + + + LI
Sbjct: 226 EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLI 285
Query: 171 EMYGKCCNTRL-ARKVFDQLRKRNLSSWHLMISGYAA-NGQGADGLMLFEQMRKTGPHPD 228
++Y KC + RKVF+++ +L W+ MISG++ DG+ F +M+ G HPD
Sbjct: 286 DLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPD 345
Query: 229 KETFLVVFAACAS-----------AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+F+ V +AC++ A A+K Y + N+ A++ +
Sbjct: 346 DCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNN-----------ALVAMYSK 394
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELED-RAEELLGDLDPSKAIVDKI 336
G++ +A + MP V + + +AQ HG VE+E R EL+ D + + I
Sbjct: 395 CGNVHDARRVFDTMPEHNMVSLNSMIAGYAQ-HG-VEVESLRLFELMLQKDIAPNTITFI 452
Query: 337 PL--------PPRKKQSATNMLEEKNRV 356
+ + Q NM++E+ R+
Sbjct: 453 AVLSACVHTGKVEEGQKYFNMMKERFRI 480
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 94 QLESLDVNLLSLCK------EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
QL++ NLL C GK A+ + ++ + F+ L CG+L + +
Sbjct: 8 QLQTFR-NLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+ + ++ N LI Y K LAR+VFD++ + ++ S++ +I+ YA
Sbjct: 67 FDLTQYPNVFSY-------NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADR 119
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
G+ L LF ++R+ D T V AC
Sbjct: 120 GECRPALRLFAEVRELRFGLDGFTLSGVIIACG 152
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +LL +C + + GK +H L S L+N +Y KC + A+ FD +
Sbjct: 12 FRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQ 71
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
N+ S++ +I+ YA + +F+++ P PD ++ + AA A +
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHLARQVFDEI----PQPDIVSYNTLIAAYADRGECRPALR 127
Query: 250 LYFEIMKNDYGI 261
L+ E+ + +G+
Sbjct: 128 LFAEVRELRFGL 139
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 213/370 (57%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L + ++ +++ G R+H L + DV + LI++YGKC A +F Q+
Sbjct: 480 WVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP 539
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + W+ +IS + +G G L LF +M+ G PD TF+ + +AC+ + V EG
Sbjct: 540 RESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKW 599
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F +M+ +YGI P ++HY ++ +LG AG L A +F++ MP P +W AL +IH
Sbjct: 600 FFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIH 658
Query: 311 GDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATNM 349
G++EL A + L ++D VDK+ R KK +
Sbjct: 659 GNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSS 718
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E RV + + + + Y +++ L +M+ GY+PD +VL D++E+ KE L
Sbjct: 719 IEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILT 778
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAIA+G+ISTPP+ +RI KNLR+CGDCHNA K +S+I RE++VRD+KRFHHF+
Sbjct: 779 SHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFK 838
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 839 NGICSCGDYW 848
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 107 KEGKVREAIEYMGQDASAS---AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G REAI+ Q + A + F +L +C L G+++H + F DV
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDV 207
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ LI MY + +AR +FD + R++ SW+ MISG NG A L + ++MR
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAG 279
G + D T + CA + L + Y I G+E + A+I + G
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLI-----HLYVIKHGLEFELFVSNALINMYAKFG 322
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
+L +A++ ++M F V W ++
Sbjct: 323 NLGDAQKVFQQM-FLRDVVSWNSI 345
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+SL DSC + KR+H LL S ++ ++ +L+ +Y + L+R FDQ++
Sbjct: 79 FNSLFDSC---TKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ 135
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQ-MRKTGPHPDKETFLVVFAACAS 241
++++ +W+ MIS Y NG + + F Q + T D TF V AC +
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT 187
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
++R ++ V + N +++MY K A KVF+ + +++ SW+ +ISGY NG ++
Sbjct: 400 IMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASE 459
Query: 213 GLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA 270
+ ++ M + ++ T++ + AA A A+++G ++ ++K + + +
Sbjct: 460 AIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVG--TC 517
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+I + G G L++A ++P E +V W A+ + IHG E
Sbjct: 518 LIDLYGKCGRLVDAMCLFYQVPRESSVP-WNAIISCHGIHGHGE 560
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 77 TGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSL 134
G S + P R + S + + L + G +A++ + + D +S+
Sbjct: 223 VGIARSLFDDMPFR---DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASI 279
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L C L I +H + ++ ++N LI MY K N A+KVF Q+ R++
Sbjct: 280 LPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDV 339
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
SW+ +I+ Y N F +M+ G PD T LV A+ A+
Sbjct: 340 VSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT-LVSLASIAA 385
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 213/372 (57%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +S+L +C L ++E GK +H + S D +L +I+MY KC A +VF++L
Sbjct: 199 VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNEL 258
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ +SSW+ MI G A +G+G + LF++M + PD TF+ V +ACA + V+EG
Sbjct: 259 PQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGK 318
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M G+ PG+EH+ ++ +LG AG L EA + + MP P V AL +I
Sbjct: 319 HYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRI 378
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR--KKQSAT 347
HG+ EL ++ + + +L+P A V K+ + R KK
Sbjct: 379 HGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKL-MNDRGVKKAPGF 437
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+M+E ++ V ++ R+ + Y K+ + +R GYVPDT VLHDIDEE KE
Sbjct: 438 SMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENP 497
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAIA+GL+ T P LRI KNLRIC DCH A K++SK+ RE+I+RD RFHH
Sbjct: 498 LYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHH 557
Query: 464 FRDGKCSCGDYW 475
FR G CSC DYW
Sbjct: 558 FRMGGCSCKDYW 569
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S S + L+ +C +IE GK++H + F D N LI MY + A
Sbjct: 89 SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQA 148
Query: 183 RKVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
R+VFD + R RN SW+ MI+ Y + + + LF++MR DK + +AC
Sbjct: 149 RRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACT 208
Query: 241 SAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
A+++G +++ I K+ GI + +I + G L +A E +P + +
Sbjct: 209 GLGALEQGKWIHGYIEKS--GIELDSKLATTVIDMYCKCGCLEKASEVFNELP-QKGISS 265
Query: 300 WEALRNFAQIHGDVE 314
W + +HG E
Sbjct: 266 WNCMIGGLAMHGKGE 280
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SLL +C +L ++E+GK +H ++ DV L L++MY KC + A +VF ++
Sbjct: 290 TMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEM 349
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ +W +I G A GQ + L F++M G PD TF+ V AAC+ A V EG
Sbjct: 350 PEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGI 409
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M + YGI P IEHY ++ +LG AG + EAEE ++ MP P V L +I
Sbjct: 410 SHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRI 469
Query: 310 HGDVELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSA-----------------TN 348
HG++E +RA + L ++DP + ++ I +K + A +
Sbjct: 470 HGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCS 529
Query: 349 MLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E V ++ D + E ++ + +++ AGYVPD VL D+ EE KE L
Sbjct: 530 QIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETEL 589
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GL+ST P+R++KNLRIC DCH+A K++SK+ RE+IVRD RFHHF
Sbjct: 590 SLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHF 649
Query: 465 RDGKCSCGDYW 475
+DG CSC +W
Sbjct: 650 KDGTCSCRGFW 660
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L +C + + M KR+HE + F + V LN L+++Y KC +LAR +FD+ +++
Sbjct: 192 NVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEK 251
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLY 251
NL SW++MI+G+ + + L+LF +M+ G DK T + AC A++ G +L+
Sbjct: 252 NLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLH 311
Query: 252 FEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
I K D + G A++ + G + A + MP E V W AL
Sbjct: 312 AYIKKQRIDVDVALG----TALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTAL 360
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F SL SC N GK++H F D N L+ MY C ARKVFD++
Sbjct: 90 TFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM 146
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASA 242
+ + SW MI +A Q + + LF++M K+ P++ T + V ACA A
Sbjct: 147 EDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARA 200
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 207/374 (55%), Gaps = 26/374 (6%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y S+L C L ++ G+ VH + +F DV + LI MY KC N A++VF
Sbjct: 333 YPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFH 392
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+++ W+ MI+GYA +G G L +F MR G PD T++ AC+ VKE
Sbjct: 393 TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKE 452
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F M + I PG EHY ++ +LG +G + EA + ++ MP EP +W AL
Sbjct: 453 GREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM-------------- 349
++H + E+ + A + L +L+P A ++ I + + A+ M
Sbjct: 513 RMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPG 572
Query: 350 ---LEEKNRVSDYRSTDL-----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+E RV + S D+ + ++ L+G + E+GY D +VLHDIDEE K
Sbjct: 573 CSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKS 632
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+L+YHSER A+AYGL+ P MP+R++KNLR+CGDCH+AIK+++KI RE+++RD RF
Sbjct: 633 HSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRF 692
Query: 462 HHFRDGKCSCGDYW 475
HHF+DG CSC DYW
Sbjct: 693 HHFKDGFCSCRDYW 706
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAA 206
RV+E R + D ++ + G C R+ AR +FD++ KRN+ SW MISGYA
Sbjct: 158 RVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ 217
Query: 207 NGQGADGLMLFEQM 220
NG+ LFE M
Sbjct: 218 NGEVNLARKLFEVM 231
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD++ R++ +W M+SGY G+ + LF++M P + ++ + + A
Sbjct: 162 ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM----PKRNVVSWTAMISGYAQ 217
Query: 242 AEAVKEGFLYFEIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
V FE+M +N+ + YI AGH+ +A E MP P
Sbjct: 218 NGEVNLARKLFEVMPERNEVSWTAMLVGYI-------QAGHVEDAAELFNAMPEHPVAAC 270
Query: 300 WEALRNFAQ 308
+ F Q
Sbjct: 271 NAMMVGFGQ 279
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ +G+ A+ VF+++R+R+ +W MI Y N + L F +M G
Sbjct: 271 NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVR 330
Query: 227 PDKETFLVVFAACASAEAVKEG 248
P+ + + + CA+ + G
Sbjct: 331 PNYPSVISILTVCAALAVLDYG 352
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 215/401 (53%), Gaps = 36/401 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G REA+ Q + D V +L +C L ++E GK VH L+ + V
Sbjct: 202 QAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVF 261
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L++MY KC +L +VF+ ++ +N+ +W MI G A +G+G+D L LF QM +G
Sbjct: 262 LGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG 321
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD F+ AC V +G F M N+YGI P IEHY ++ +L G L EA
Sbjct: 322 VKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEA 381
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPP 340
+ VE+MP +P +W AL + H +VEL + + +L+P K+ ++ I
Sbjct: 382 RDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSAS 441
Query: 341 RKKQSA---TNMLEEK----------------------NRVSDYRSTDLYRGEYEKMKGL 375
+ SA N++ EK +S R D+ YE +
Sbjct: 442 GRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYE----I 497
Query: 376 NGQMR-EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
+ ++R E GYVPD + VL DI+EE E AL HSE+LAIA+ LIST MP+RI+KNLR+
Sbjct: 498 DSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRV 557
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
C DCH+ K++SK+ GRE+IVRD RFH F+DG CSC DYW
Sbjct: 558 CQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H LLRTSA V D N LI + + AR +FD++ +RN SW M++GY G G
Sbjct: 148 HLLLRTSAAV-DASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDG 206
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA 270
+ L +F QM+ G PD + V AACA A+++G +K + I + A
Sbjct: 207 REALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKAN-NIRMTVFLGTA 265
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ + G + E E M + V W + +HG
Sbjct: 266 LVDMYAKCGEVQLGMEVFEGMK-DKNVLAWTTMIKGLAMHG 305
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 207/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L +CG L ++E G+ +H + +V + LI+MY KC + AR VFD++R +
Sbjct: 278 AVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDK 337
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ MI GYA +G L LFE+M +TG P TF+ + +AC V+EG +F
Sbjct: 338 DVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFF 397
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M++ YGI P IEHY ++ +LG AGHL EA V+ M +W L ++H +
Sbjct: 398 RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVN 457
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
++L + + L G+ + + + +K+ + +E
Sbjct: 458 IKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIE 517
Query: 352 EKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V ++ R + Y + +N ++ GY P T VLHD+ EE KE++L+ H
Sbjct: 518 VDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVH 577
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLIST P ++I+KNLR+C DCH +K++S+I GR++++RD RFHHF DG
Sbjct: 578 SEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDG 637
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 638 LCSCGDYW 645
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L SC S+E GK +H D+ + L+++Y + + AR++FD++
Sbjct: 148 FSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMP 203
Query: 191 KRNLSS-------------------------------WHLMISGYAANGQGADGLMLFEQ 219
+R+L S W++MI GYA +G + L LF +
Sbjct: 204 ERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRR 263
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M P++ T L V +AC A++ G ++N GI + A+I + G
Sbjct: 264 MLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK-GIQINVHVGTALIDMYSKCG 322
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L +A +R+ + V W ++ +HG
Sbjct: 323 SLEDARLVFDRIR-DKDVVAWNSMIVGYAMHG 353
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 217/373 (58%), Gaps = 35/373 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-K 191
++LD+C ++ G VH+ LR S +V + L MYG+C + AR++F+++ +
Sbjct: 536 AVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ ++ MI+ Y+ NG + L LF +M++ G PD+++F+ V +AC+ EG+
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M+ YGI P +HY + VLG AG L +AEE + M +PTV VW+ L + +
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 312 DVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPR--KKQSATNML 350
DV+ A ++ +LDP +A + + R +KQ+ + +
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWI 775
Query: 351 EEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
E K+RV ++ RS ++YR +++ L+ ++RE GYVPDTR VL +DE KE+
Sbjct: 776 EIKSRVHEFVAGDRSHPRSEEIYR----ELERLHAEIREIGYVPDTRLVLRKVDEAEKER 831
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSERLAIA G++S+ +R++KNLR+C DCHNA K +SKIV +E++VRD RFH
Sbjct: 832 LLCQHSERLAIALGVMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFH 890
Query: 463 HFRDGKCSCGDYW 475
HF DG CSCGDYW
Sbjct: 891 HFVDGSCSCGDYW 903
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+L+++ S+ G+ +H +D+ L N L++MY +C + AR +F+ +
Sbjct: 328 TLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI-PG 386
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS----AEAVKEG 248
N SW+ MI+G + GQ L LF++M+ G P + T+L + A AS A A+ EG
Sbjct: 387 NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEG 446
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV--WEALRN 305
L+ I+ Y P I A++K+ S G + EA +R E +V W A+ +
Sbjct: 447 RKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIIS 504
Query: 306 FAQIHG 311
HG
Sbjct: 505 SLSQHG 510
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L +C L + G+ +H + S L N L+ +YG C A +F+++
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM- 189
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+L SW+ I+ A +G L LF++M+ G P + T ++ + CA +++
Sbjct: 190 ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARA 246
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSA----GHLIEAEEFVERMPFEPTVEVWEALRNF 306
I++ G+E + + L SA GHL +A+E +R E V W A+
Sbjct: 247 IHSIVRE-----SGLEQTLVVSTALASAYARLGHLDQAKEVFDRAA-ERDVVSWNAMLGA 300
Query: 307 AQIHG 311
HG
Sbjct: 301 YAQHG 305
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL + G+ + + G+R+H R + + EL N L+ +Y KC + +VF +L R+
Sbjct: 35 LLRAAGDDRLLSQGRRIHA--RIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+SW +I+ Y +GQ + +F +M++ G D TFL V ACA + +G
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI-- 150
Query: 254 IMKNDYGIVPGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ + + G+E + +L GS G + A ERM E + W A
Sbjct: 151 ---HAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANAQ 205
Query: 310 HGDVEL 315
GD+++
Sbjct: 206 SGDLDM 211
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR---KRNLSSWH 198
+++ G+++H + + + + + +++MY C A F + + ++ SW+
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
+IS + +G G L F +M G P++ T + V ACA A A+ EG + + +++
Sbjct: 501 AIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS 560
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ + A+ + G G L A E E++ E V ++ A+
Sbjct: 561 -GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
I + +H ++R S + + ++ L Y + + A++VFD+ +R++ SW+ M+
Sbjct: 241 IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGA 300
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
YA +G ++ +LF +M G P K T + C+S L F M + +
Sbjct: 301 YAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS--------LRFGRMIHACALEK 352
Query: 264 GIEHYI----AIIKVLGSAGHLIEAEEFVERMP 292
G++ I A++ + G EA E +P
Sbjct: 353 GLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP 385
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 217/373 (58%), Gaps = 29/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C NL + +GK++H L+ S + + ++N L++MY KC + AR VF+++
Sbjct: 239 VLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRM 298
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ SW +I G A +G+ + L L++QM P++ TF+ + AC+ A V +G
Sbjct: 299 LHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGR 358
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M DY I P ++ + + +L +GHL EAE+ ++ MP +P W AL + +
Sbjct: 359 KLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKH 418
Query: 310 HGDVELEDRAEELLGDL---DPSKAIV--------DKIPLPPRKKQSATNMLEEKNRVSD 358
HG+ E+ R + L L +PS ++ K R ++ T+M E R
Sbjct: 419 HGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDM--EVKRKPG 476
Query: 359 YRSTDL-------YRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
Y S DL + GE + +K L+ +MR+ GY+PDT YVLHD++E+ KE+
Sbjct: 477 YSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKER 536
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSER A+AYGL+ P +RI+KNLRICGDCH +K+ S IV +E+IVRD R+H
Sbjct: 537 ELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYH 596
Query: 463 HFRDGKCSCGDYW 475
HF+DG+CSC D+W
Sbjct: 597 HFKDGRCSCNDFW 609
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
K YM + V+++LL +C +L S+ +GK+VH S FV D + + L
Sbjct: 86 KTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSL 145
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
++MY KC +AR VFD + + SW M+SGYA +G + + LF
Sbjct: 146 VDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELF 193
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
K++H + S + L N L++ YGKC + A +FD++ +R+ SW +++ Y
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80
Query: 207 NGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG 248
L +F M T PD + + ACAS +++ G
Sbjct: 81 AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLG 123
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 199/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ + + + ++ F DV L +I+M+ KC AR++FD++ ++
Sbjct: 494 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 553
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y +GQG L LF M ++G P+K T + + AC+ A V+EG +F
Sbjct: 554 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 613
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M DY + ++HY ++ +LG AG L EA + +E M E +W A + H D
Sbjct: 614 SLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673
Query: 313 VELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNMLE 351
V L ++A L +L P D + KK +E
Sbjct: 674 VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 733
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+ + D YE +K L ++ GYVPDT +VLHD+DEE K L H
Sbjct: 734 VDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSH 793
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+TP P+RIIKNLR+CGDCH K++S I GR +IVRD RFHHF++G
Sbjct: 794 SEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEG 853
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 854 ACSCGDYW 861
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L++MY KC AR +FD++++R+L +W +MI GYA G+ + L+LFE+MR+ G
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 225 PHPDKETFLVVFAACASAEAVKEGFL---YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
PDK + V ACA A+ + + Y + K ++ G A+I + G +
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG----TAMIDMYAKCGCV 310
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
A E +RM E V W A+ HG +A +L + S + DKI L
Sbjct: 311 ESAREIFDRME-EKNVISWSAMIAAYGYHGQGR---KALDLFRMMLSSGMLPDKITLA 364
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ + + + ++ F DV L +I+MY KC AR++FD++ ++
Sbjct: 264 TVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK 323
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
N+ SW MI+ Y +GQG L LF M +G PDK T + AC
Sbjct: 324 NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +C N +++ ++VH ++++ + NKL+ Y A +FD +
Sbjct: 363 LASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMC 422
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ SW +M+ G+A G + F ++ + G PD T C +A E +
Sbjct: 423 VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFCGNA---NESLV 475
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA---EEFVERMPFEPTVEVWEALRNFA 307
F+ M+ + G+VP + ++ G + +A +++++R F+ V + A+ +
Sbjct: 476 LFDKMREE-GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 534
Query: 308 QIHGDV----ELEDRAEE 321
G V E+ DR EE
Sbjct: 535 AKCGCVESAREIFDRMEE 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S L +C NL + ++VH ++++ + NKLI Y A +FD +
Sbjct: 84 YISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 140
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
R+ SW +M+ G+A G + F ++ + G PD T V AC
Sbjct: 141 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 189
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 217/371 (58%), Gaps = 28/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L + ++ +++ G R+H + + DV + LI++YGKC A +F Q+
Sbjct: 523 WVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 582
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +W+ +IS + +G L LF +M G PD TF+ + +AC+ + V+EG
Sbjct: 583 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +M+ +YGI P ++HY ++ +LG AG+L A F++ MP +P +W AL +IH
Sbjct: 643 CFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIH 701
Query: 311 GDVELEDRAEELLGDLDPSKAI------------------VDKIPLPPR----KKQSATN 348
G++EL A + L ++D SK + VDK+ R KK +
Sbjct: 702 GNIELGKFASDRLFEVD-SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 760
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + + + + YE+++ L +M+ GY+PD +VL D++E+ KE L
Sbjct: 761 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 820
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+G+ISTPP+ P+RI KNLR+CGDCHNA K +S+I RE++VRD+ RFHHF
Sbjct: 821 TSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHF 880
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 881 KDGICSCGDYW 891
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
++R ++DV + N +++MY K A KVF+ + +++ SW+ +I+GYA NG ++
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASE 502
Query: 213 GLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA 270
+ +++ M + P++ T++ + A A A+++G ++ ++K + ++ ++A
Sbjct: 503 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL----HLDVFVA 558
Query: 271 --IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
+I V G G L++A ++P E +V W A+ + IHG E + +L G++
Sbjct: 559 TCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE---KTLKLFGEM 612
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ F +L +CG L G+R+H F +V + LI MY + T +AR +FD
Sbjct: 218 FYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ R++ SW+ MISG NG A L + ++MR G + T + + C +
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 248 GFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L + Y I G+E + A+I + G+L +A + ++M F V W ++
Sbjct: 335 AMLI-----HLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM-FITDVVSWNSI 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L DS K +H LL + V+ + ++ +L+ +Y + L+R FDQ+
Sbjct: 122 FNFLFDSS---TKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 178
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACAS 241
++++ +W+ MIS Y NG + + F Q+ PD TF V AC +
Sbjct: 179 QKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT 230
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 77 TGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQD--ASASAGYDVFSSL 134
TG S + P R + S + + L + G +A++ + + + S+
Sbjct: 266 TGIARSLFDDMPFR---DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSI 322
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L C L I +H + D+ ++N LI MY K N ARK F Q+ ++
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDV 382
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
SW+ +I+ Y N F +M+ G PD T + + + A + K
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 213/372 (57%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +S+L +C L ++E GK +H + S D +L +I+MY KC A +VF++L
Sbjct: 254 VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNEL 313
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ +SSW+ MI G A +G+G + LF++M + PD TF+ V +ACA + V+EG
Sbjct: 314 PQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGK 373
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M G+ PG+EH+ ++ +LG AG L EA + + MP P V AL +I
Sbjct: 374 HYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRI 433
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR--KKQSAT 347
HG+ EL ++ + + +L+P A V K+ + R KK
Sbjct: 434 HGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKL-MNDRGVKKAPGF 492
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+M+E ++ V ++ R+ + Y K+ + +R GYVPDT VLHDIDEE KE
Sbjct: 493 SMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENP 552
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAIA+GL+ T P LRI KNLRIC DCH A K++SK+ RE+I+RD RFHH
Sbjct: 553 LYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHH 612
Query: 464 FRDGKCSCGDYW 475
FR G CSC DYW
Sbjct: 613 FRMGGCSCKDYW 624
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S S + L+ +C +IE GK++H + F D N LI MY + A
Sbjct: 115 SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQA 174
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
R+VFD + +R++ SW +I+GY+ G +FE M P + ++ + AA +
Sbjct: 175 RRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELM----PERNSVSWNAMIAAYVQS 230
Query: 243 EAVKEGFLYFEIMK 256
+ E F F+ M+
Sbjct: 231 NRLHEAFALFDRMR 244
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 10/191 (5%)
Query: 127 GYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
G D FS +L+ N +S+E +RV + + +DV LI Y + AR+
Sbjct: 152 GADGFSLNNLIHMYVNFQSLEQARRVFDNMPQ----RDVVSWTSLITGYSQWGFVDKARE 207
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
VF+ + +RN SW+ MI+ Y + + + LF++MR DK + +AC A
Sbjct: 208 VFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGA 267
Query: 245 VKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++G +++ I K+ GI + +I + G L +A E +P + + W +
Sbjct: 268 LEQGKWIHGYIEKS--GIELDSKLATTVIDMYCKCGCLEKASEVFNELP-QKGISSWNCM 324
Query: 304 RNFAQIHGDVE 314
+HG E
Sbjct: 325 IGGLAMHGKGE 335
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 218/371 (58%), Gaps = 28/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L + ++ +++ G ++H + + DV + LI++YGKC A +F Q+
Sbjct: 523 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 582
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +W+ +IS + +G L LF +M G PD TF+ + +AC+ + V+EG
Sbjct: 583 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +M+ +YGI P ++HY ++ +LG AG+L A +F++ MP +P +W AL +IH
Sbjct: 643 CFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 701
Query: 311 GDVELEDRAEELLGDLDPSKAI------------------VDKIPLPPR----KKQSATN 348
G++EL A + L ++D SK + VDK+ R KK +
Sbjct: 702 GNIELGKFASDRLFEVD-SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 760
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + + + + YE+++ L +M+ GY+PD +VL D++E+ KE L
Sbjct: 761 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 820
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+G+ISTPP+ P+RI KNLR+CGDCHNA K +S+I RE++VRD+ RFHHF
Sbjct: 821 TSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHF 880
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 881 KDGICSCGDYW 891
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
++R ++DV + N +++MY K A KVF+ + +++ SW+ +I+GYA NG ++
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASE 502
Query: 213 GLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA 270
+ +++ M + P++ T++ + A A A+++G ++ ++K + ++ ++A
Sbjct: 503 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL----HLDVFVA 558
Query: 271 --IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
+I V G G L++A ++P E +V W A+ + IHG E + +L G++
Sbjct: 559 TCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE---KTLKLFGEM 612
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ F +L +CG L G+++H F +V + LI MY + T +AR +FD
Sbjct: 218 FYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ R++ SW+ MISG NG A L + ++MR G + T + + C +
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 248 GFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L + Y I G+E + A+I + G+L +A + ++M F V W ++
Sbjct: 335 AMLI-----HLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM-FITDVVSWNSI 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L DS K +H LL + V+ + ++ +L+ +Y + L+R FDQ+
Sbjct: 122 FNFLFDSS---TKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 178
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACAS 241
++++ +W+ MIS Y NG + + F Q+ PD TF V AC +
Sbjct: 179 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT 230
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 15/239 (6%)
Query: 77 TGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQD--ASASAGYDVFSSL 134
TG S + P R + S + + L + G +A++ + + + S+
Sbjct: 266 TGIARSLFDDMPFR---DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSI 322
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L C L I +H + D+ ++N LI MY K N ARK F Q+ ++
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDV 382
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----EGF 249
SW+ +I+ Y N F +M+ G PD T + + + A + K GF
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
IM+ + ++ + A++ + G L A + E +P + + + +AQ
Sbjct: 443 ----IMRRGW-LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ 496
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 219/379 (57%), Gaps = 34/379 (8%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +SS+ + + ++E G+ VH L S + N ++ MY K + ARKV
Sbjct: 260 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 319
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD++ KR+L +W+ M++ A G G + + FE++RK G ++ TFL V AC+ V
Sbjct: 320 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 379
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
KEG YF++MK DY + P I+HY++ + +LG AG L EA FV +MP EPT VW AL
Sbjct: 380 KEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLG 438
Query: 306 FAQIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQ 344
++H + ++ A + + +LDP + + + KK+
Sbjct: 439 ACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKE 498
Query: 345 SATNMLEEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID 396
A + ++ +N V + +S D+YR E +N ++++AGYVP+T +VL I+
Sbjct: 499 PACSWVQIENSVHMFVADDDTHPKSGDIYRMWEE----INMRIKKAGYVPNTAHVLLHIN 554
Query: 397 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
E+ +E L+YHSE++A+A+ LI+ P +RI+KN+RICGDCH+A K +SK+ RE++VR
Sbjct: 555 EQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVR 614
Query: 457 DNKRFHHFRDGKCSCGDYW 475
D RFHHF +G CSCGDYW
Sbjct: 615 DTNRFHHFSEGSCSCGDYW 633
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G +G+++H L + +DV + + L++MY +C +A VFD+L
Sbjct: 163 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 222
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+G+A G LM F +M++ G T+ +F+A A A+++G
Sbjct: 223 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 282
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+++ ++K+ + + + ++ + +G +++A + +RM
Sbjct: 283 WVHAHLIKSGQKLTAFVGN--TMLGMYAKSGSMVDARKVFDRM 323
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ S++ +C K++ + +H L S D L N LI MY KC AR VFD++
Sbjct: 62 LYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKM 121
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ SW +I+GYA N A+ + L M + P+ TF + A + G
Sbjct: 122 PSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIG 180
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 213/369 (57%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L SC L ++ GK +H + DV + + L++MY KC +++RKVFDQ+ ++
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W+++I Y +G G + + L M G P++ TF+ VFAAC+ + V EG F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEVWEALRNFAQIHG 311
+MK DYG+ P +HY ++ +LG AG + EA + + MP + W +L ++IH
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 312 DVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNML 350
++E+ + A + L L+P S + DK R +K+ + +
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + V + + D + EK+ G L +MR+ GYVPDT VLH+++E+ KE L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+G+++T P +R+ KNLR+C DCH A K +SKIV RE+I+RD +RFH F++
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 882 GTCSCGDYW 890
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGK 148
G L + + L SLC+ ++ EA+EY+ + D F SS+L +C +L+ + GK
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 149 RVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+H L+ + ++ + + L++MY C R+VFD + R + W+ MI+GY+ N
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 208 GQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEA 244
+ L+LF M ++ G + T V AC + A
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +LL + +L+ +E+GK++H + + V V + N L+ +Y KC + KVFD++
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+RN SW+ +IS + + L F M P T + V AC++
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 117 YMGQDASAS--AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG 174
++G + SA A + ++ +C + + +H + +D + N L++MY
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-----------KT 223
+ +A ++F ++ R+L +W+ MI+GY + D L+L +M+ +
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 224 GPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P+ T + + +CA+ A+ +G ++ +KN+ + A++ + G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMYAKCGCLQ 569
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ + +++P + V W + +HG+
Sbjct: 570 MSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 90 RGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL---KSIEM 146
R SL +L S K EA M + + + + S ++ +C NL + + M
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS-VVTACSNLPMPEGLMM 220
Query: 147 GKRVHELLRTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
GK+VH + ++ ELN N L+ MYGK ++ + R+L +W+ ++S
Sbjct: 221 GKQVH-----AYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N Q + L +M G PD+ T V AC+ E ++ G
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 223/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ E+I Q + S + F+S++ +C +L S++ G+ VH + + DV+
Sbjct: 293 RNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVK 352
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
I+MY KC A +VF Q+ ++N+ SW MI+G+ +G A+ L LF +MR
Sbjct: 353 NYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVN 412
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ V +AC+ + ++EG+ +F+ M DYGI P EHY ++ +LG AG + EA
Sbjct: 413 QLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEA 472
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------IVDKI 336
F+ MP EP W AL +IH EL + + L L+ ++ I +
Sbjct: 473 LSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADV 532
Query: 337 PLPPRKKQSATNMLEEK-NRVSDYRSTD----LY------RGEYEKMK------GLNGQM 379
+ K++ M E+ +++ + S + LY R Y+ + L +M
Sbjct: 533 GMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERM 592
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
RE GYVPD R+VLHD+D+E K++ L HSE+LAI +GL+++ MP+RI KN+R+CGDCH
Sbjct: 593 RELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCH 652
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K +S I R++I+RD KRFHH +DG CSCGDYW
Sbjct: 653 TASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKCCNTRLARKVFDQ 188
V L+ +CGN+ + + GK H L F+ + L L++MY KC A K+F++
Sbjct: 216 VVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEE 275
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R++ W +I+G+A NG+ + + +F QM P+ TF + AC+S ++K+G
Sbjct: 276 ISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQG 335
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ +++N G+ +++Y + I + G ++ A ++P E V W + N
Sbjct: 336 RSVHGYMIRN--GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGF 392
Query: 308 QIHG 311
+HG
Sbjct: 393 GMHG 396
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+A K F+ + NL SW+ +++ ++ N D L LF++M K G D + AC
Sbjct: 65 VASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACF 124
Query: 241 SAEAVKEGFLYFEI-----MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
+ L+ + ++ D + P A++ V G L EA + E +P +
Sbjct: 125 GLSLFQGAKLFHSLAIKLRLEGDPYVAP------ALMNVYTELGSLEEAHKVFEEVPLKN 178
Query: 296 TVEVWEAL----RNFAQIHGDVELEDRAEELLGDLDP 328
+V +W + NF++ G EL R +LDP
Sbjct: 179 SV-IWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDP 214
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 3/206 (1%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
+ +C L + K H L D + L+ +Y + + A KVF+++ +N
Sbjct: 120 VKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNS 179
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
W +MI G+ + LF +MR++G D + AC + A KEG + +
Sbjct: 180 VIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGL 239
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFAQIHGDV 313
I +++ + G L A + E + + V VW A + FA+ +
Sbjct: 240 CIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVV-VWSAIIAGFARNGRAL 298
Query: 314 ELEDRAEELLGD-LDPSKAIVDKIPL 338
E ++L D + P+ I L
Sbjct: 299 ESISMFRQMLADSVTPNSVTFASIVL 324
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 213/369 (57%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L SC L ++ GK +H + DV + + L++MY KC +++RKVFDQ+ ++
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W+++I Y +G G + + L M G P++ TF+ VFAAC+ + V EG F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEVWEALRNFAQIHG 311
+MK DYG+ P +HY ++ +LG AG + EA + + MP + W +L ++IH
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 312 DVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNML 350
++E+ + A + L L+P S + DK R +K+ + +
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + V + + D + EK+ G L +MR+ GYVPDT VLH+++E+ KE L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+G+++T P +R+ KNLR+C DCH A K +SKIV RE+I+RD +RFH F++
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 882 GTCSCGDYW 890
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGK 148
G L + + L SLC+ ++ EA+EY+ + D F SS+L +C +L+ + GK
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 149 RVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+H L+ + ++ + + L++MY C R+VFD + R + W+ MI+GY+ N
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 208 GQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEA 244
+ L+LF M ++ G + T V AC + A
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +LL + +L+ +E+GK++H + + V V + N L+ +Y KC + KVFD++
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+RN SW+ +IS + + L F M P T + V AC++
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 117 YMGQDASAS--AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG 174
++G + SA A + ++ +C + + +H + +D + N L++MY
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-----------KT 223
+ +A ++F ++ R+L +W+ MI+GY + D L+L +M+ +
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 224 GPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P+ T + + +CA+ A+ +G ++ +KN+ + A++ + G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMYAKCGCLQ 569
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ + +++P + V W + +HG+
Sbjct: 570 MSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 90 RGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL---KSIEM 146
R SL +L S K EA M + + + + S ++ +C NL + + M
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS-VVTACSNLPMPEGLMM 220
Query: 147 GKRVHELLRTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
GK+VH + ++ ELN N L+ MYGK ++ + R+L +W+ ++S
Sbjct: 221 GKQVH-----AYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N Q + L +M G PD+ T V AC+ E ++ G
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 214/372 (57%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S+LL S S+E GK +H + S + N L+ MY K N A+KVFD+L
Sbjct: 298 TYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL 357
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEG 248
K ++ S + M+ GYA +G G + + LFE+M P+ TFL V AC+ A + EG
Sbjct: 358 VKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEG 417
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YFE+MK YG+ P + HY ++ + G AG L +A+ F+E MP EP +W AL ++
Sbjct: 418 LYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASK 476
Query: 309 IHGDVELEDRAEELLGDLDP----SKAIVDKIPLPP-----------------RKKQSAT 347
+H + E+ A + + +LDP + ++ I KK+ A
Sbjct: 477 MHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPAC 536
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E +N V + + D+ + YE + LN +++E GYVPDT +V +D++ KE
Sbjct: 537 SWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELN 596
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
LQYHSE+LA+A+ L++T P +RI+KN+R+CGDCH+AIK +S +V RE+IVRD RFHH
Sbjct: 597 LQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHH 656
Query: 464 FRDGKCSCGDYW 475
FRDG CSC DYW
Sbjct: 657 FRDGSCSCRDYW 668
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 101/182 (55%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SSL+ CG L S GK++H F ++V + + L++MY +C R +R VFD+L
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE 257
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+N SW+ +ISG+A G+G + L LF +M++ G + T+ + + ++ ++++G +
Sbjct: 258 SKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKW 317
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ +MK+ +V + + ++ + +G++ +A++ +R+ V L +AQ
Sbjct: 318 LHAHMMKSGKKLVGYVGN--TLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQ- 374
Query: 310 HG 311
HG
Sbjct: 375 HG 376
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+++ LL C L ++ GK VH L S F D+ + N ++ MY KC + +AR+VFD++
Sbjct: 93 IYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEM 152
Query: 190 RKRNLSSWHLMISGYAANGQGAD---GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+++ +W MI+GY+ +G + L+LF +M + G P++ + C +
Sbjct: 153 CVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCV 212
Query: 247 EG 248
+G
Sbjct: 213 DG 214
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 220/396 (55%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIE-YMG-QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA++ + G + A S FSS + + NL I +G+++H L S + V
Sbjct: 419 QNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVF 478
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L++MY KC A + FD++ +RN SW+ +IS YA GQ + + +FE M G
Sbjct: 479 SGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG 538
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD TFL V +AC+ +E YFE+M+ +YGI P EHY +I LG G +
Sbjct: 539 FKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKV 598
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPP 340
+E + MPFE +W ++ + + HG+ +L A E L + + A I+ I
Sbjct: 599 QEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKA 658
Query: 341 RK-----------------KQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQM 379
K K++ + +E K++V + S D ++K L +M
Sbjct: 659 GKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEM 718
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ GY PDT L +D++ K ++L+YHSERLAIA+ LI+TPP P+R++KNL C DCH
Sbjct: 719 DKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCH 778
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+AIK+MSKIV R++IVRD+ RFHHF+DG CSCGDYW
Sbjct: 779 SAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SLL G++ I +GK++H L + + N LI+MY KC A+ F
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+ SW MI+G NGQ + L LF MR+ G PD+ TF A ++ + G
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ ++++ G + + A++ + G L EA + + MP ++ W A+
Sbjct: 464 LHSYLIRS--GHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSIS-WNAV 514
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
++ KEG EA++ + +A FS++L + + +G++VH L+ A
Sbjct: 213 MMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLV-ARAT 271
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+V +NN L++ Y KC +K+F ++ +R+ S+++MI+GYA N + L LF +
Sbjct: 272 SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFRE 331
Query: 220 MR 221
M+
Sbjct: 332 MQ 333
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
L+ +V + N L++ Y K AR+VF ++ R+ +++ M+ G + G A+
Sbjct: 166 LKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEA 225
Query: 214 LMLFEQMRKTGPHPDKETFLVVF 236
L LF MR+ G + TF V
Sbjct: 226 LDLFAAMRRKGLAATRFTFSTVL 248
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 209/395 (52%), Gaps = 28/395 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ E + + A D F+ S+L +C + ++ +G+RVH V + +
Sbjct: 202 GRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVG 261
Query: 167 NKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N LI++Y KC A KVF+++ R + SW +I G A NG G D L LF M +
Sbjct: 262 NALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERL 321
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P T + V AC+ V +GF YF M++ YGI PGIEH ++ +LG AG + EA
Sbjct: 322 IPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAH 381
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----------------- 328
++ MP EP VW L +H +EL + A L +LDP
Sbjct: 382 NYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVG 441
Query: 329 ----SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMR 380
+ + + +K +++E +N V ++ D E Y+ + + ++R
Sbjct: 442 RWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLR 501
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GYVP T VL DI+EE KE AL YHSERLAIA+ L+ + P P+RI+KNLR+CGDCH
Sbjct: 502 CQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHL 561
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++SK+ RE+IVRD RFHHF+ G+CSC DYW
Sbjct: 562 VIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+ LL +C L ++ G+ +H + V V + N L+ YG C A +VFD++
Sbjct: 123 YPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIP 182
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RNL SW+ +++G+AANG+ + L +F + + PD T + V ACA A+ G
Sbjct: 183 VLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLG 242
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + G+V A+I + G + +A + E M TV W +L
Sbjct: 243 -RRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSL 296
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 221/381 (58%), Gaps = 25/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
QD+ S L C NL+S+ GK +H + F++DV + L+ +Y KC +
Sbjct: 304 QDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDL 363
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
L+R VF+ + ++++ +W+ MI + +G+G + L+LF +M +G P+ TF+ V + C
Sbjct: 364 ELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGC 423
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ ++ EG L F M +++ I P +HY ++ VL AG L EA +F+ +MP EPT
Sbjct: 424 SHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAA 483
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM------ 349
W AL +++ +VEL A L +++P A ++ I + +K A+ +
Sbjct: 484 WGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRD 543
Query: 350 -----------LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHD 394
++ KN+V + + D + Y + ++ +MR GY P+T +VL +
Sbjct: 544 KGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQN 603
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+D+E +E+ L HSERLA+A+G++++ + +R+ KNLRICGDCHNAIK+++KIVG ++I
Sbjct: 604 VDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQII 663
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD+ RFHHFRDG C+C D+W
Sbjct: 664 VRDSLRFHHFRDGYCTCNDFW 684
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+C++G + MG + + V SS+L +C + I++G+ VH + + +V
Sbjct: 158 MCRQGIL--LFREMGLNGIRANSLTV-SSILPACADY--IKLGREVHGFILRNEMEGNVY 212
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+++ L+ MY + AR VFD + R++ SW++M++ Y N + GL LF QMRK G
Sbjct: 213 VSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEG 272
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL--- 281
++ ++ + C E L D GI P + I I+ L +L
Sbjct: 273 IKLNQASWNAAISGCMQ-NGQHELALGILCKMQDSGIKP---NRITIVSALPGCTNLESL 328
Query: 282 ---IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
E +V R F V + AL GD+EL
Sbjct: 329 RGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLEL 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+ +C + + K++H+ F KD+ L N LI+M+GKC AR VFD +
Sbjct: 79 VLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDM 138
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+++ SW M Y G G++LF +M G + T + ACA
Sbjct: 139 VVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 170 IEMYGKCCNT---RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
I++ C N+ + A +FD++ + +L +W ++ISG+ +G + ++ +
Sbjct: 15 IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR 74
Query: 227 PDKETFLVVFAACASA 242
PDK L V ACA++
Sbjct: 75 PDKFVLLSVAKACAAS 90
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 213/369 (57%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L SC L ++ GK +H + DV + + L++MY KC +++RKVFDQ+ ++
Sbjct: 435 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W+++I Y +G G + + L M G P++ TF+ VFAAC+ + V EG F
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 554
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEVWEALRNFAQIHG 311
+MK DYG+ P +HY ++ +LG AG + EA + + MP + W +L ++IH
Sbjct: 555 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 614
Query: 312 DVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNML 350
++E+ + A + L L+P S + DK R +K+ + +
Sbjct: 615 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 674
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + V + + D + EK+ G L +MR+ GYVPDT VLH+++E+ KE L
Sbjct: 675 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 734
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+G+++T P +R+ KNLR+C DCH A K +SKIV RE+I+RD +RFH F++
Sbjct: 735 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 794
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 795 GTCSCGDYW 803
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGK 148
G L + + L SLC+ ++ EA+EY+ + D F SS+L +C +L+ + GK
Sbjct: 176 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 235
Query: 149 RVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+H L+ + ++ + + L++MY C R+VFD + R + W+ MI+GY+ N
Sbjct: 236 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 295
Query: 208 GQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEA 244
+ L+LF M ++ G + T V AC + A
Sbjct: 296 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 333
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +LL + +L+ +E+GK++H + + V V + N L+ +Y KC + KVFD++
Sbjct: 13 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 72
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+RN SW+ +IS + + L F M P T + V AC++
Sbjct: 73 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 117 YMGQDASAS--AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG 174
++G + SA A + ++ +C + + +H + +D + N L++MY
Sbjct: 305 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 364
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-----------KT 223
+ +A ++F ++ R+L +W+ MI+GY + D L+L +M+ +
Sbjct: 365 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 424
Query: 224 GPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P+ T + + +CA+ A+ +G ++ +KN+ + A++ + G L
Sbjct: 425 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMYAKCGCLQ 482
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ + +++P + V W + +HG+
Sbjct: 483 MSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 90 RGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL---KSIEM 146
R SL +L S K EA M D + S++ +C NL + + M
Sbjct: 75 RNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMM 133
Query: 147 GKRVHELLRTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
GK+VH + ++ ELN N L+ MYGK ++ + R+L +W+ ++S
Sbjct: 134 GKQVH-----AYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 188
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N Q + L +M G PD+ T V AC+ E ++ G
Sbjct: 189 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 220/385 (57%), Gaps = 32/385 (8%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q+ + +++L +C + ++ GK +H + S DV L N L++MYGKC
Sbjct: 329 QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEV 388
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+R+VFD + ++L+SW++M++ YA NG + + LFE M ++G PD TF+ + + C
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + G FE MK ++ + P +EHY ++ +LG AG + EA + +E MPF+P+ +
Sbjct: 449 SDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----------------IVDKI--PLPP 340
W +L N ++HG+V + + A + L L+P VDKI +
Sbjct: 509 WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQ 568
Query: 341 R--KKQSATNMLEEKNRVS--------DYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRY 390
R KK++ + ++ K+++ ++R++D Y+ + + L + ++GY P+T
Sbjct: 569 RGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTE---LQEAIEKSGYSPNTSV 625
Query: 391 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
VLHD+DEE K + HSERLA Y LI T +P+RI KNLR+C DCH+ +KI+S++
Sbjct: 626 VLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTR 685
Query: 451 RELIVRDNKRFHHFRDGKCSCGDYW 475
R +++RD KRFHHF DG CSC DYW
Sbjct: 686 RVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 103 LSLCKEGKVREA---IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSA 158
L L K K+ EA IE S + + ++ LL +C + KS+ G ++ L L +
Sbjct: 103 LGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPS 162
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS---WHLMISGYAANGQGADGLM 215
+ +L +KLI ++ C LARK+FD + +L + W M GY+ NG D L+
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKV 274
++ M + P + V AC + ++ G ++ +I+K + + Y ++K+
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV--YNVLLKL 280
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+G +A + + M E V W +L
Sbjct: 281 YMESGLFDDARKVFDGMS-ERNVVTWNSL 308
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S L +C +LK + +G+ +H + D + N L+++Y + ARKVFD +
Sbjct: 239 ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 298
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+RN+ +W+ +IS + + + LF +M++ T + AC+ A+ G
Sbjct: 299 ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKE 358
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +I+K+ P + +++ + G G +E V + + W + N I
Sbjct: 359 IHAQILKSKEK--PDVPLLNSLMDMYGKCGE-VEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 310 HGDVE 314
+G++E
Sbjct: 416 NGNIE 420
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 213/372 (57%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E GK +H + + + D + N L+++Y KC LAR +FD +
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++L SW +MI+GY +G G + + F +MR G PD+ +F+ + AC+ + +++G+
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F IMKND+ I P +EHY ++ +L G+L +A EF+E +P P +W AL +
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRN 613
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ D+EL ++ E + +L+P K + +KI +K +
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCS 673
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK-----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K +V+ + S + + K +K + +M+E G+ P T+Y L + DE KE A
Sbjct: 674 WIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMA 733
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GL++ PPR +R+ KNLR+CGDCH K MSK RE+++RD+ RFHH
Sbjct: 734 LCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHH 793
Query: 464 FRDGKCSCGDYW 475
F+DG CSC +W
Sbjct: 794 FKDGYCSCRGFW 805
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+ + + Y+G D + S+L C N ++ +GK VH L S+F + + +N L+
Sbjct: 238 IYKQMMYLGIDVDLAT----IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC + A +VF+++ +RN+ SW MI+GY +G+ + L +QM K G D
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 231 TFLVVFAACASAEAVKEG 248
+ ACA + ++ G
Sbjct: 354 AITSILHACARSGSLDNG 371
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
Q+ + +L C+ G + A+E + + + S+L C LKS GK+VH +
Sbjct: 65 QVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSI 124
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+++++ D L KL+ Y C + + R+VFD + K+N+ W+ M+S YA G +
Sbjct: 125 IKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 214 LMLFEQMRKTG 224
+ LF+ M + G
Sbjct: 185 ICLFKIMVEKG 195
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 107 KEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++G+ AI+ + Q DV +S+L +C S++ GK VH+ ++ + ++
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MY KC + A VF + +++ SW+ MI
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL-------------------- 428
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD T V ACAS A++ G ++ I++N Y + + A++ + G L
Sbjct: 429 -KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGL 485
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + +P + V W + +HG
Sbjct: 486 ARLLFDMIPSKDLVS-WTVMIAGYGMHG 512
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 210/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C N E+GK+VH ++ T + + ++N L++MY KC + A+ +F ++
Sbjct: 246 VLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEM 305
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++++ SW +I G A +G + L L++ M G P++ TF+ + AC+ V +G
Sbjct: 306 RRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGR 365
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M D+GI P ++HY ++ + +GHL EAE + MP +P W AL + +
Sbjct: 366 ALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKH 425
Query: 310 HGDVELEDRAEELLGDL---DPSKAIVDKIPLPPRKKQSATNML------EEKNRVSDYR 360
HG+ ++ R + L DL DPS I+ +M+ +E +V Y
Sbjct: 426 HGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYS 485
Query: 361 STDLYR-------GEYEK---------MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
DL R GE + M L+ +MR GYVPDT VL D+D++ KE+ L
Sbjct: 486 CVDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQL 545
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+AYGL+ P +RI+KNLR+CGDCH +K++S I RE+ VRD KR+HHF
Sbjct: 546 FWHSERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHF 605
Query: 465 RDGKCSCGDYW 475
+DGKCSC D+W
Sbjct: 606 KDGKCSCNDFW 616
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 130 VFSSLLDSCGNLKSI--EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
VFSSL+ +C NL S+ ++GK++H S F +D + + L++MY K R VFD
Sbjct: 111 VFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFD 170
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+ + + SW MISGYA +G+ + L LF +
Sbjct: 171 SIFELSSISWTAMISGYARSGRKLEALELFRE 202
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 218/371 (58%), Gaps = 28/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L + ++ +++ G ++H + + DV + LI++YGKC A +F Q+
Sbjct: 290 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 349
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ + +W+ +IS + +G L LF +M G PD TF+ + +AC+ + V+EG
Sbjct: 350 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 409
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +M+ +YGI P ++HY ++ +LG AG+L A +F++ MP +P +W AL +IH
Sbjct: 410 CFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 468
Query: 311 GDVELEDRAEELLGDLDPSKAI------------------VDKIPLPPR----KKQSATN 348
G++EL A + L ++D SK + VDK+ R KK +
Sbjct: 469 GNIELGKFASDRLFEVD-SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 527
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + + + + YE+++ L +M+ GY+PD +VL D++E+ KE L
Sbjct: 528 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 587
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+G+ISTPP+ P+RI KNLR+CGDCHNA K +S+I RE++VRD+ RFHHF
Sbjct: 588 TSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHF 647
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 648 KDGICSCGDYW 658
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
FV V + ++MY K A KVF+ + +++ SW+ +I+GYA NG ++ + +++
Sbjct: 216 FVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 275
Query: 219 QMRKTGP-HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIA--IIKV 274
M + P++ T++ + A A A+++G ++ ++K + ++ ++A +I V
Sbjct: 276 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL----HLDVFVATCLIDV 331
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
G G L++A ++P E +V W A+ + IHG E + +L G++
Sbjct: 332 YGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE---KTLKLFGEM 379
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ F +L +CG L G+++H F +V + LI MY + T +AR +FD
Sbjct: 118 FYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 174
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ R++ SW+ MISG NG A L + ++MR G
Sbjct: 175 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L DS K +H LL + V+ + ++ +L+ +Y + L+R FDQ+
Sbjct: 22 FNFLFDSS---TKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 78
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACAS 241
++++ +W+ MIS Y NG + + F Q+ PD TF V AC +
Sbjct: 79 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT 130
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 215/404 (53%), Gaps = 43/404 (10%)
Query: 113 EAIEYMGQDASASAGY----DVFSSLLDSCGNLKSIEMGKRVHEL---------LRTSAF 159
+AIE+ G S G+ F +L +C L +++G ++H L +
Sbjct: 95 DAIEFYG--LMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGM 152
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V++V + L++MY KC N AR VFD + ++++ SW MI GYA NG + + LF Q
Sbjct: 153 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 212
Query: 220 MR---KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
M+ K G PD TF+ + C A V EG YF M + + P IEHY ++ +LG
Sbjct: 213 MQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLG 272
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------- 328
AG L EA + + MP E VW AL +IH D +L + A + L +L+P
Sbjct: 273 RAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVL 332
Query: 329 -----------SKAIVDKIPLPPRKKQS--ATNMLEEKNRVSDYRSTDLYR----GEYEK 371
+A ++ + ++ Q + +E V ++ D Y Y K
Sbjct: 333 LSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAK 392
Query: 372 MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKN 431
+ L +M+ AGYVP T +VL DI+EE KE L HSE+LAIA+GLIS P +R++KN
Sbjct: 393 LDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKN 452
Query: 432 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LR+CGDCH AIK++S I GRE+ VRDN RFH FR+G CSC DYW
Sbjct: 453 LRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 218/379 (57%), Gaps = 34/379 (8%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +SS+ + + ++E G+ VH L S + N ++ MY K + ARKV
Sbjct: 157 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 216
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD++ KR+L +W+ M++ A G G + + FE++RK G ++ TFL V AC+ V
Sbjct: 217 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 276
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
KEG YF++MK DY + P I+HY++ + +LG AG L EA FV +MP EPT VW AL
Sbjct: 277 KEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLG 335
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQ 344
++H + ++ A + + +LDP + + KK+
Sbjct: 336 ACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKE 395
Query: 345 SATNMLEEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID 396
A + ++ +N V + +S D+YR E +N ++++AGYVP+T +VL I+
Sbjct: 396 PACSWVQIENSVHMFVADDDTHPKSGDIYRMWEE----INMRIKKAGYVPNTAHVLLHIN 451
Query: 397 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
E+ +E L+YHSE++A+A+ LI+ P +RI+KN+RICGDCH+A K +SK+ RE++VR
Sbjct: 452 EQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVR 511
Query: 457 DNKRFHHFRDGKCSCGDYW 475
D RFHHF +G CSCGDYW
Sbjct: 512 DTNRFHHFSEGSCSCGDYW 530
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G +G+++H L + +DV + + L++MY +C +A VFD+L
Sbjct: 60 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+G+A G LM F +M++ G T+ +F+A A A+++G
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+++ ++K+ + + + ++ + +G +++A + +RM
Sbjct: 180 WVHAHLIKSGQKLTAFVGN--TMLGMYAKSGSMVDARKVFDRM 220
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY KC AR VFD++ R++ SW +I+GYA N A+ + L M + P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 232 FLVVFAACASAEAVKEG 248
F + A + G
Sbjct: 61 FTSLLKATGACGGCSIG 77
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 220/385 (57%), Gaps = 32/385 (8%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q+ + +++L +C + ++ GK +H + S DV L N L++MYGKC
Sbjct: 336 QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEV 395
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+R+VFD + ++L+SW++M++ YA NG + + LFE M ++G PD TF+ + + C
Sbjct: 396 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 455
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + G FE MK ++ + P +EHY ++ +LG AG + EA + +E MPF+P+ +
Sbjct: 456 SDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 515
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----------------IVDKI--PLPP 340
W +L N ++HG+V + + A + L L+P VDKI +
Sbjct: 516 WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQ 575
Query: 341 R--KKQSATNMLEEKNRVS--------DYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRY 390
R KK++ + ++ K+++ ++R++D Y+ + + L + ++GY P+T
Sbjct: 576 RGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTE---LQEAIEKSGYSPNTSV 632
Query: 391 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
VLHD+DEE K + HSERLA Y LI T +P+RI KNLR+C DCH+ +KI+S++
Sbjct: 633 VLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTR 692
Query: 451 RELIVRDNKRFHHFRDGKCSCGDYW 475
R +++RD KRFHHF DG CSC DYW
Sbjct: 693 RVIVLRDTKRFHHFVDGICSCKDYW 717
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 103 LSLCKEGKVREA---IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSA 158
L L K K+ EA IE S + + ++ LL +C + KS+ G ++ L L +
Sbjct: 110 LGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPS 169
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS---WHLMISGYAANGQGADGLM 215
+ +L +KLI ++ C LARK+FD + +L + W M GY+ NG D L+
Sbjct: 170 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 229
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKV 274
++ M + P + V AC + ++ G ++ +I+K + + Y ++K+
Sbjct: 230 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV--YNVLLKL 287
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+G +A + + M E V W +L
Sbjct: 288 YMESGLFDDARKVFDGMS-ERNVVTWNSL 315
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S L +C +LK + +G+ +H + D + N L+++Y + ARKVFD +
Sbjct: 246 ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 305
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+RN+ +W+ +IS + + + LF +M++ T + AC+ A+ G
Sbjct: 306 ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKE 365
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +I+K+ P + +++ + G G +E V + + W + N I
Sbjct: 366 IHAQILKSKEK--PDVPLLNSLMDMYGKCGE-VEYSRRVFDVMLTKDLASWNIMLNCYAI 422
Query: 310 HGDVE 314
+G++E
Sbjct: 423 NGNIE 427
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 212/374 (56%), Gaps = 33/374 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L+SC L++++ G+ VH + D+ ++N L+ MY KC + VF ++
Sbjct: 343 LTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS 402
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW+ +I G A +G G L LF QM +T PD+ T + +AC + + +G
Sbjct: 403 RKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRC 462
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F+ ++GI EHY +++ +LG G L EAE + MP + VW AL + + H
Sbjct: 463 FFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINH 522
Query: 311 GDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPRKKQSATNMLEE- 352
+V + +RA + + DL P+ + V KI RKK +L++
Sbjct: 523 SNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKI----RKKMKDEGILKQP 578
Query: 353 -----------KNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
N +S +S L R Y+K++ L G+++E GYVPD ++ HD++ E KE
Sbjct: 579 GSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKE 638
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+ L YHSERLAI +GLIST + ++KNLRICGDCHNA+K+ SK+VGRE++VRD RF
Sbjct: 639 EMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRF 698
Query: 462 HHFRDGKCSCGDYW 475
HHF +G CSCGDYW
Sbjct: 699 HHFHNGTCSCGDYW 712
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AS A + L +C N+ + +G ++H L+ + + + ++ LI Y C
Sbjct: 233 ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDN 292
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +F+ RN+ W +++GY N + D L +F+ M + P++ + +C
Sbjct: 293 ASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCG 352
Query: 242 AEAVKEG 248
EAV G
Sbjct: 353 LEAVDRG 359
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 221/395 (55%), Gaps = 29/395 (7%)
Query: 109 GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK +EAI+ +DA ++L +C ++ ++ +G+R+H+ S + K++ +
Sbjct: 224 GKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVC 283
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI+MY KC A ++FD + +R + SW MI+G AA+G+ D L LF +M TG
Sbjct: 284 NTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+ + AC+ V++G YF M DYGIVP IEHY ++ + AG L EA E
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------------------ 328
F+ MP P VW AL ++H +++L + A L LDP
Sbjct: 404 FIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGR 463
Query: 329 --SKAIVDKIPLPPR--KKQSATNMLEEKNRVSDYRSTDLYRGEYEKM----KGLNGQMR 380
A V K+ + R KK + + + V ++ + D + E++ + L +M+
Sbjct: 464 WEDVARVRKL-MRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMK 522
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GYVP+T VL D++E+ KEK L HSE+LA+ +GLI T P +RI+KNLR+C DCH
Sbjct: 523 LKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHA 582
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A+KI+S + RE++VRD RFH F++G CSCGDYW
Sbjct: 583 ALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 41/218 (18%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S +L +C L + GK VH + ++ L N ++ +Y C +ARKVFD++ +
Sbjct: 117 SFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQ 176
Query: 192 RNLSSWHLMIS-------------------------------GYAANGQGADGLMLFEQM 220
R++ +W++MI+ GYA G+ + + LF +M
Sbjct: 177 RDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEM 236
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLG 276
G P++ T + V ACA G L +D+ G E I +I +
Sbjct: 237 EDAGLLPNEVTVVAVLVACADM-----GNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYV 291
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G L +A + M E TV W A+ HG E
Sbjct: 292 KCGCLEDACRIFDNME-ERTVVSWSAMIAGLAAHGRAE 328
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 210/372 (56%), Gaps = 29/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C NL +++ G+ +H + ++ D L L++MY KC LA +VF+++
Sbjct: 305 VLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 364
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +SSW+ MI G A +G+ D + LF +M +P++ TF+ V ACA V++G
Sbjct: 365 SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGL 421
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M+ +YG+ P IEHY I+ +LG AG L EAE+ V +P EPT VW AL +
Sbjct: 422 TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 481
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS-------- 361
HG+VEL +R ++L +L+P + + K + E ++ R
Sbjct: 482 HGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 541
Query: 362 -TDLYRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
DL RGE Y+ + + +++ GY PD VL DIDEE KE A
Sbjct: 542 IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETA 601
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LAI +GLI+T P +RI+KNLR+C DCH+A K++S++ RE+IVRD R+HH
Sbjct: 602 VWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHH 661
Query: 464 FRDGKCSCGDYW 475
FR+G CSC D+W
Sbjct: 662 FRNGACSCKDFW 673
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I + +C +AR+ FD++++R+ SW MI GY G + L +F QM+K
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P K V +ACA+ A+ +G K + + G+ +++ + G + A E
Sbjct: 301 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG-TSLVDMYAKCGRIDLAWE 359
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVE 314
E+M V W A+ +HG E
Sbjct: 360 VFEKMS-NKEVSSWNAMIGGLAMHGRAE 386
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-----ARKVFDQLRKRNLSSWHLMIS 202
K+ H L+ + ++D + L++ Y R + +VFD +RK N+ W+ MI
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGI 261
N + ++L+ +M P+K T+ V AC+ + V EG ++ ++K+ G
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLG- 170
Query: 262 VPGIEHYI-AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G H + + I++ S G L+EA ++ E W A+ + G+VE
Sbjct: 171 --GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE 222
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 226/379 (59%), Gaps = 36/379 (9%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELL-----RTSAFVKDVELNNKLIEMYGKCCNTR 180
A + +SS+ + + ++E GK VH + R SAFV N +++MY K +
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV-----GNTILDMYAKSGSMI 318
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
ARKVFD++ K+++ +W+ M++ +A G G + + FE+MRK G H ++ TFL + AC+
Sbjct: 319 DARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 378
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
VKEG YF++MK +Y + P I+HY+ ++ +LG AG L +A F+ +MP +PT VW
Sbjct: 379 HGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDP--------------------SKAIVDKI-PLP 339
AL ++H + ++ A + + +LDP + A V K+
Sbjct: 438 GALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKAT 497
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDI 395
KK+ A + +E +N V + + D R E Y+K + ++ Q+R+AGYVP+T YVL +
Sbjct: 498 GVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHV 557
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
DE+ ++ LQYHSE++A+A+ LI+ P +RI+KN+RICGDCH+A + +SK+ RE++V
Sbjct: 558 DEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVV 617
Query: 456 RDNKRFHHFRDGKCSCGDY 474
RD RFHHF G CSCGDY
Sbjct: 618 RDTNRFHHFSSGSCSCGDY 636
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G S +G+++H L + DV + + L++MY +C +A VFDQL
Sbjct: 167 TFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL 226
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+G+A G G L++F +M++ G T+ VF+A A A+++G
Sbjct: 227 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 286
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + + + I+ + +G +I+A + +R+ + V L FAQ
Sbjct: 287 WVHAHMIKSGERLSAFVGN--TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ 344
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 99 DVNLLSLCKEGKVREAIEYMGQDA-SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
D+ + + G +R+ ++ + DA +A ++ SL+ +C +S++ + +H L S
Sbjct: 36 DIPVPAAASTGIIRDTLDSV--DARELAATPRLYHSLITACARYRSLDDARAIHAHLAGS 93
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F V L+N LI +Y KC AR+VFD + R++ SW +I+GYA N + L L
Sbjct: 94 QFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLL 153
Query: 218 EQMRKTGPHPDKETFLVVF-AACASAEA 244
M + P+ TF + AA ASA +
Sbjct: 154 PGMLRGRFKPNGFTFASLLKAAGASASS 181
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 208/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L + ++ S+ GK++H S + N L MY K + ARKVF+ LR
Sbjct: 377 LAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLR 436
Query: 191 K-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ R+ SW MI A +G G + + LFEQM G PD T++ V +AC V++G
Sbjct: 437 QNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGR 496
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++MKN + I P + HY ++ + G AG L EA +FVE MP EP V W +L + ++
Sbjct: 497 SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV 556
Query: 310 HGDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATN 348
+ +V+L A E L G D + I + KK+ +
Sbjct: 557 YKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLS 616
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ +N+ + D + Y+ M + ++++ G+ PDT VLHD++ E K++ L
Sbjct: 617 WVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQIL 676
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LAIA+G+ISTP LRI+KNLR+C DCHNAIK +SK+V RE+IVRD RFHHF
Sbjct: 677 RYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHF 736
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 737 KDGSCSCKDYW 747
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 107 KEGKVREAIEYMG---QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G EA+++ +D S +S L +C NL+ + GK++H + + F
Sbjct: 216 QHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASG 275
Query: 164 ELNNKLIEMYGKCCNTRLARKV---------------------------------FDQLR 190
+ N LI MY K +AR++ F+ L+
Sbjct: 276 AVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLK 335
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ +W MI GY NG D + +F+ M GP P+ T + +A +S ++ G
Sbjct: 336 DPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHG 393
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L SC S +GK+VH + V + N L+ MY K + ++A+ VFD+++
Sbjct: 110 LTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK 169
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN SSW+ MIS + G+ L FE + + D ++ + A C E
Sbjct: 170 LRNTSSWNAMISLHMNCGRVDLALAQFELLSER----DIVSWNSMIAGCNQHGFDNEALQ 225
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL------IEAEEFVERMPFEPTVEVWEALR 304
+F + D + P ++ L + +L + ++ R F+ + V AL
Sbjct: 226 FFSSILKDTSLKP---DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALI 282
Query: 305 NFAQIHGDVELEDRAEELLG--DLD 327
+ G VE+ R E G DLD
Sbjct: 283 SMYAKSGGVEIARRIIEQSGISDLD 307
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A +VFD + R+ SW +I GY G+ D + +F M K
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 227 PDKETFLVVFAACAS--AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P + T V A+CA+ + + + F + + VP +++ + G L A
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVAN---SLLNMYAKTGDLKMA 161
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
+ +RM T W A+ + G V+L ELL + D
Sbjct: 162 KVVFDRMKLRNT-SSWNAMISLHMNCGRVDLALAQFELLSERD 203
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 212/372 (56%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E GK +H + + + D + N L+++Y KC LAR +FD +
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++L SW +MI+GY +G G + + F +MR G PD+ +F+ + AC+ + +++G+
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F IMKND+ I P +EHY ++ +L G+L +A EF+E +P P +W AL +
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRN 613
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ D+EL ++ E + +L+P K + +KI +K +
Sbjct: 614 YHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCS 673
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK-----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+E K +V+ + S + + K +K + +M+E G+ P T+Y L + DE KE A
Sbjct: 674 WIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMA 733
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GL++ PPR +R+ KNLR+CGDCH K MSK RE+++RD RFHH
Sbjct: 734 LCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHH 793
Query: 464 FRDGKCSCGDYW 475
F+DG CSC +W
Sbjct: 794 FKDGYCSCRGFW 805
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+ + + Y+G D + S+L C N ++ +GK VH L S+F + + +N L+
Sbjct: 238 IYKQMMYLGIDVDLAT----IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC + A +VF+++ +RN+ SW MI+GY +G+ + L +QM K G D
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 231 TFLVVFAACASAEAVKEG 248
+ ACA + ++ G
Sbjct: 354 AITSILHACARSGSLDNG 371
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
Q+ + +L C+ G + A+E + + +SS+L C LKS GK+VH +
Sbjct: 65 QVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSI 124
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+++++ D L KL+ Y C + + R+VFD + K+N+ W+ M+S YA G +
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 214 LMLFEQMRKTG 224
+ LF+ M + G
Sbjct: 185 ICLFKIMVEKG 195
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 107 KEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++G+ AI+ + Q DV +S+L +C S++ GK VH+ ++ + ++
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MY KC + A VF + +++ SW+ MI
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL-------------------- 428
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
PD T V ACAS A++ G ++ I++N Y + + A++ + G L
Sbjct: 429 -KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGL 485
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + +P + V W + +HG
Sbjct: 486 ARLLFDMIPSKDLVS-WTVMIAGYGMHG 512
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 222/396 (56%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA+E + A Y+VF+ S + + NL I+ GK++H + + + E
Sbjct: 524 QSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETE 583
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI +YGKC + A+ F ++ +RN SW+ +I+ + +G G + L LF+QM++ G
Sbjct: 584 VANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEG 643
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ V AAC+ V+EG YF+ M +++GI P +HY ++ +LG AG L A
Sbjct: 644 LKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRA 703
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-----------SKAIV 333
+FVE MP VW L + ++H ++E+ + A + L +L+P + A+
Sbjct: 704 RKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVT 763
Query: 334 DKIPLPPR----------KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQM 379
K +K+ + +E KN V + D L Y+ + L+ ++
Sbjct: 764 GKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRL 823
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ GY+ ++ H+ ++E K+ HSE+LA+A+GL+S PP MPLR+IKNLR+C DCH
Sbjct: 824 AKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCH 883
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+K S+++GRE+++RD RFHHF +G CSCGD+W
Sbjct: 884 TWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S + +C +K++ G+++H + S + DV + N L+ +Y +C ++ A +F+ +
Sbjct: 449 LASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE 508
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ +W+ M+SG+A +G + L +F +M + G + TF+ +A A+ +K+G
Sbjct: 509 HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQ 568
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE-EFVE 289
++ ++K G E A+I + G G + +A+ +F E
Sbjct: 569 IHATVIKT--GCTSETEVANALISLYGKCGSIEDAKMQFFE 607
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ L C G++K + +H T +D N LI++Y K + AR+VF+QL
Sbjct: 44 FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
R+ SW M+SGYA NG G + + L+ QM +G P V +AC A ++G
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ ++ K + + A+I + G L AE MP+ V + AQ
Sbjct: 164 LVHAQVYKQGSCSETVVGN--ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQ 221
Query: 309 I-HGDVELEDRAEELLGDLDP 328
+G+ LE E L P
Sbjct: 222 CGNGESALEIFEEMRLSGWTP 242
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L +C E G+ VH + + + N LI +Y + + LA +VF ++
Sbjct: 145 VLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEM 204
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+ +++ +IS +A G G L +FE+MR +G PD T + AACAS + +G
Sbjct: 205 PYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGK 264
Query: 249 ----FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+L M DY I+ G +++ + G ++EA E
Sbjct: 265 QLHSYLLKAGMSPDY-IIEG-----SLLDLYVKCGVIVEALE 300
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ LL +C I +G+++H L + F D+ ++ LI+MY K AR++ + L
Sbjct: 348 YPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLE 407
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW MI+GY + + L F+ M+ G PD +ACA +A+++G
Sbjct: 408 AKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C ++ + GK++H L + D + L+++Y KC A ++F +
Sbjct: 248 ASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDR 307
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+LM+ Y A LF QM G P++ T+ + C A + G
Sbjct: 308 TNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 207/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+G+ + + + D + N LI+MY KC N +A +F+ L +R
Sbjct: 268 SVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQR 327
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W M+ G A NG G + L +F QM K PD+ T++ V +AC V EG +F
Sbjct: 328 DKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFF 387
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M +GI P I HY ++ +LG AGHL EA E ++ MP +P VW AL +IH D
Sbjct: 388 ASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKD 447
Query: 313 VELEDRAEELLGDLDPSKAIV--------------DKI-----PLPPR--KKQSATNMLE 351
E+ +RA E + +L+P+ V DK+ + R KK +++E
Sbjct: 448 AEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIE 507
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++ + D + Y K+ + ++ AGY P+T V DI EE KE A+ H
Sbjct: 508 MNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRH 567
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI++ P + +RI+KNLR+C DCH+ K++SK+ RE+IVRD RFHHFR G
Sbjct: 568 SEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHG 627
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 628 SCSCKDYW 635
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 21/238 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-----ARKVFD 187
SL ++C KS+ K++H + + + + NK++ CC+ AR++FD
Sbjct: 19 SLFETC---KSMYHLKQIHSRTIKTGIICNPIIQNKILSF---CCSREFGDMCYARQLFD 72
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ + ++ SW++M GY+ G+ L+ +M + PD T+ +F + A++
Sbjct: 73 TIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQL 132
Query: 248 GF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RN 305
G L+ ++K YG+ + + A+I + G LI+ + M + V W A+
Sbjct: 133 GRELHCHVVK--YGLDSNVFAHNALINMYSLCG-LIDMARGIFDMSCKSDVVTWNAMISG 189
Query: 306 FAQIHGDVELEDRAEELL---GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR 360
+ +I DV G +D ++ K +P R S T M++ R++ Y+
Sbjct: 190 YNRIKKDVISWTAIVTGFVNTGQVDAARKYFHK--MPERDHVSWTAMIDGYLRLNCYK 245
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
ARK F ++ +R+ SW MI GY + LMLF +M+ + PD+ T + V ACA
Sbjct: 216 ARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQ 275
Query: 242 AEAVKEG 248
A++ G
Sbjct: 276 LGALELG 282
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 43/378 (11%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +CG+L +E G+ ++E R ++ ++N ++M KC + A +FD++ +R
Sbjct: 241 SALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQR 300
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW +I GYA NG+ L LF +M+ G P+ TFL V +AC+ V EG+ YF
Sbjct: 301 NVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYF 360
Query: 253 EIM--KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
M +D I P EHY ++ +LG +GHL EA F++ MP E +W AL IH
Sbjct: 361 NFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPRKKQSATNMLEEK 353
+++L +LL +L P A V+K+ +KK +
Sbjct: 421 QNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGA-------- 472
Query: 354 NRVSDYRSTD-------LYRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDE 397
+V+ Y S + LY G+ K++ L QM+ GY+P+T V HD+++
Sbjct: 473 RKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVED 532
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 457
E KE L HSE+LAIA+ LI+ P+ P+R++KNLRICGDCH K++S+I RE+I+RD
Sbjct: 533 EEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMRD 592
Query: 458 NKRFHHFRDGKCSCGDYW 475
RFHHF++G CSC D+W
Sbjct: 593 KNRFHHFKNGICSCKDFW 610
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD++ K W+ ++ GY NG + ++ +MR G PD TF V ACA
Sbjct: 88 ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAE 147
Query: 242 AEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKV-LGSAGHLIEAEEFVERMPFEPTVEV 299
+ G ++ ++K+ V + + I+ V G G EF+ E +
Sbjct: 148 LAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELG----CAEFLFGSMVERDLVA 203
Query: 300 WEAL 303
W AL
Sbjct: 204 WNAL 207
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++ +C L + G +H + + +L+ MY K A +F +
Sbjct: 137 TFPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSM 196
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+L +W+ +I+ G + L F +M G PD T + +AC ++ G
Sbjct: 197 VERDLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGE 256
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+E + + GI I + A + + G + +A + MP + V W + +
Sbjct: 257 EIYEFAREE-GIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMP-QRNVISWSTVIGGYAV 314
Query: 310 HGDVE 314
+G+ E
Sbjct: 315 NGESE 319
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 210/372 (56%), Gaps = 29/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C NL +++ G+ +H + ++ D L L++MY KC LA +VF+++
Sbjct: 256 VLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 315
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +SSW+ MI G A +G+ D + LF +M +P++ TF+ V ACA V++G
Sbjct: 316 SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGL 372
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M+ +YG+ P IEHY I+ +LG AG L EAE+ V +P EPT VW AL +
Sbjct: 373 TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 432
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS-------- 361
HG+VEL +R ++L +L+P + + K + E ++ R
Sbjct: 433 HGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 492
Query: 362 -TDLYRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
DL RGE Y+ + + +++ GY PD VL DIDEE KE A
Sbjct: 493 IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETA 552
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LAI +GLI+T P +RI+KNLR+C DCH+A K++S++ RE+IVRD R+HH
Sbjct: 553 VWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHH 612
Query: 464 FRDGKCSCGDYW 475
FR+G CSC D+W
Sbjct: 613 FRNGACSCKDFW 624
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-----ARKVFDQLRKRNLSSWHLMIS 202
K+ H L+ + ++D + L++ Y R + +VFD +RK N+ W+ MI
Sbjct: 72 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 131
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGI 261
N + ++L+ +M P+K T+ V AC+ A V EG ++ ++K+ G
Sbjct: 132 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG- 190
Query: 262 VPGIEHYI-AIIKVLGSAGHLIEAEEFVE 289
G H + + I++ S G L+EA ++
Sbjct: 191 --GDGHILSSAIRMYASFGRLVEARRILD 217
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 218/394 (55%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G EA++++ + + D FS L + GNL ++ G+++H + F D +
Sbjct: 732 GPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVL 791
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++MYGKC ++ + R+ SW+++IS A +G F +M G
Sbjct: 792 NATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLK 851
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD TF+ + +AC+ V EG +YF M +++G+ IEH + II +LG +G L EAE
Sbjct: 852 PDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEG 911
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----------------- 329
F+++MP P VW +L ++HG++EL +A + L +L+ S
Sbjct: 912 FIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQR 971
Query: 330 ----KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
+ + ++ KK+ A + ++ KN+V + D + + Y K++ L RE
Sbjct: 972 WGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTRE 1031
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
G++PDT Y L D DEE KE L HSER+A+A+GLI++ PLRI KNLR+CGDCH+
Sbjct: 1032 EGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSV 1091
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SKIVGR+++VRD+ RFHHF GKCSC DYW
Sbjct: 1092 FKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y S+LL +CG+ + ++ G+ +H L+ S +V + N L+ MY + ++ A VF
Sbjct: 452 YITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFH 511
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ R+L SW+ M++ + +G+ + ++L +M KT + TF +AC + E +K
Sbjct: 512 TMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLK- 570
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + + I + H + I + + G G + EA++ + MP E V W AL
Sbjct: 571 -------IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNAL 622
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+GK +H L ++ N L+ MY K + + A+ VFD++ RN +SW+ MISG+
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
G + F M + G P + AC + + EG G++ +
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++ G+ G + EA + E + EP + W +L
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSL 321
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRV-HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ ++++ +CG MG ++ +++++ V + N LI M+G + A +VF+
Sbjct: 351 NTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFN 410
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+++R+ SW+ +I+ A NG+ + L F MR+T P D T + AC SA+ +K
Sbjct: 411 NMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKW 470
Query: 248 GFLYFEIMKNDYGIVP--GIEHYIAIIKVLGS----AGHLIEAEEFVERMPFEPTVEVWE 301
G + +G++ G+E + + L S AG +AE MP + W
Sbjct: 471 G-------RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLIS-WN 522
Query: 302 AL 303
++
Sbjct: 523 SM 524
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 126 AGYDVFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
+ Y +LL +C + + + G +H + + F D + + LI MY +C + +
Sbjct: 649 SNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSY 708
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+FD L +N S+W+ + S A G G + L +MR G D+ +F V A +
Sbjct: 709 IFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTV 768
Query: 245 VKEG 248
+ EG
Sbjct: 769 LDEG 772
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L S + + S ++GK AI + + + Y F++ L +C NL+ + K VH
Sbjct: 518 LISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHA 574
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ A ++ + N L+ MYGK A+KV + +R++ +W+ +I G+A +
Sbjct: 575 FVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNA 634
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+ F MR+ G + T + + C S +
Sbjct: 635 TIQAFNLMRREGLLSNYITIVNLLGTCMSPD 665
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 81 HSQNTNDPL--RGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSC 138
++Q+ D + R +A ++ + + K + +M ++ + Y V +S++ +C
Sbjct: 200 YAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSY-VIASMVTAC 258
Query: 139 GNLKSIEMGKR-VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
+ G R +H + + +V + L+ YG + A K+F+++ + N+ SW
Sbjct: 259 DRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSW 318
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ YA NG + L ++ +R G T V C
Sbjct: 319 TSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCG 361
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 194/329 (58%), Gaps = 25/329 (7%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY KC + AR VFD + KRN SW M+SGY +G+G + L +F++M+K G PD +
Sbjct: 1 MYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDIS 60
Query: 232 FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
FLV+ AC+ + V +G YF+IM+ DY +V EHY +I +L G L +A + ++ M
Sbjct: 61 FLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEM 120
Query: 292 PFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIPLPPR------ 341
P EP+ +W AL + ++H +VEL + A L ++ D S ++ I R
Sbjct: 121 PMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVA 180
Query: 342 -----------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVP 386
KK+ + ++ K + + RS L Y ++ L G+++ GYVP
Sbjct: 181 RIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVP 240
Query: 387 DTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMS 446
+T + LHD+D+E K L HSE+LA+AYGL++T P P+RI KNLR+CGDCH+A +S
Sbjct: 241 ETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYIS 300
Query: 447 KIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KIV E+IVRD+ RFHHF++G CSCG YW
Sbjct: 301 KIVDHEIIVRDSSRFHHFKNGSCSCGGYW 329
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 207/372 (55%), Gaps = 34/372 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ S ++ + G+ +H F + ++ LI+MY KC + ++A +F++LR++
Sbjct: 265 TVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREK 324
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW+ +I+GYA +G + L LFE+M K PD TF+ AAC+ + EG +
Sbjct: 325 RVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALY 383
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M D I P +EHY ++ +LG G L EA + + +M P VW AL N + HG+
Sbjct: 384 NLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGN 443
Query: 313 VELEDRAEELLGDLDPSKA-------------------------IVDKIPLPPRKKQSAT 347
VEL + A E L +L+P + ++DK KK A
Sbjct: 444 VELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDK----GIKKNIAC 499
Query: 348 NMLEEKNRVSDYRSTDLYR----GEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E KN+V + S D+ Y ++K L G MREAGYVPDT V HD++E+ K
Sbjct: 500 SWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDM 559
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSERLAIA+GLIST P L I KNLRIC DCH AIK +SKI RE+ VRD R+HH
Sbjct: 560 VCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHH 619
Query: 464 FRDGKCSCGDYW 475
FR G CSCGDYW
Sbjct: 620 FRHGLCSCGDYW 631
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%)
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
S+ + + ++SLL+SC + K++E GK++H L +++L KL+ Y C + R A
Sbjct: 53 SSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNA 112
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
+FD++ K NL W+++I YA NG + L+ QM + G PD T V AC++
Sbjct: 113 HHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSAL 172
Query: 243 EAVKEG 248
+ EG
Sbjct: 173 STIGEG 178
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C L +I G+ +HE + S + +DV + L++MY KC AR VFD++ R+
Sbjct: 165 VLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRD 224
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
W+ M++ YA NG + L L +M G P + T + V ++ A + G E
Sbjct: 225 AVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHG---RE 281
Query: 254 IMKNDYGIVPGIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
I + +G G ++ A+I + G + A ER+ E V W A+ +
Sbjct: 282 I--HGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLR-EKRVVSWNAIITGYAM 338
Query: 310 HG-DVELEDRAEELLGDLDP 328
HG VE D E ++ + P
Sbjct: 339 HGLAVEALDLFERMMKEAQP 358
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 209/374 (55%), Gaps = 33/374 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L SC +L +I++GK +H + + L+ LI++Y KC N AR+VFD ++
Sbjct: 365 FLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK 424
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++L+SW+ MI G A +GQ LF +M G P++ TF+ + +AC A V G
Sbjct: 425 IKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQ 484
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M DY I P +HY +I +LG AG EAE ++ M +P +W +L + H
Sbjct: 485 FFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDH 544
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
G VEL + E L +L+P I ++ KK
Sbjct: 545 GRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTT 604
Query: 350 LEEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+E N V ++ +S D+YR ++ ++ Q++ G+V DT VL+D+DEE KE
Sbjct: 605 IEVDNVVHEFLVGDKVHPQSEDIYR----MLEEVDEQLKVFGFVADTSEVLYDMDEEWKE 660
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
AL +HSE+LAIA+GLIST P P+RIIKNLR+C +CH+A K++SKI RE+I RD RF
Sbjct: 661 GALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRF 720
Query: 462 HHFRDGKCSCGDYW 475
HHF+DG CSC DYW
Sbjct: 721 HHFKDGSCSCNDYW 734
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 33/204 (16%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY---GKCCNTRL------ 181
F LL SC L S GK++H + FV DV ++ LI MY G+ N +L
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSN 191
Query: 182 ----------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
AR++FD++ +++ SW+ MI+GYA G+ + L+LFE
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFED 251
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
MRK P++ T + V +ACA + A+ G ++ D G+ ++ A+I + G
Sbjct: 252 MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIE-DRGLCSNLKLVNALIDMYSKCG 310
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
L A E + M E V W +
Sbjct: 311 DLQTARELFDDM-LERDVISWNVM 333
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C ++++G + + +++L N LI+MY KC + + AR++FD + +R
Sbjct: 266 SVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER 325
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW++MI GY + L LF +M +G P + TFL + +CA A+ G
Sbjct: 326 DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIH 385
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ ++ V ++I + G+++ A + + M + ++ W A+ +HG
Sbjct: 386 AYINKNFNSVS-TSLSTSLIDLYAKCGNIVAARQVFDGMKIK-SLASWNAMICGLAMHGQ 443
Query: 313 VELEDRAEELLGDL 326
D+A EL +
Sbjct: 444 A---DKAFELFSKM 454
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 210/372 (56%), Gaps = 29/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C NL +++ G+ +H + ++ D L L++MY KC LA +VF+++
Sbjct: 304 VLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 363
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +SSW+ MI G A +G+ D + LF +M +P++ TF+ V ACA V++G
Sbjct: 364 SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGL 420
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M+ +YG+ P IEHY I+ +LG AG L EAE+ V +P EPT VW AL +
Sbjct: 421 TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 480
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS-------- 361
HG+VEL +R ++L +L+P + + K + E ++ R
Sbjct: 481 HGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 540
Query: 362 -TDLYRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
DL RGE Y+ + + +++ GY PD VL DIDEE KE A
Sbjct: 541 IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETA 600
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LAI +GLI+T P +RI+KNLR+C DCH+A K++S++ RE+IVRD R+HH
Sbjct: 601 VWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHH 660
Query: 464 FRDGKCSCGDYW 475
FR+G CSC D+W
Sbjct: 661 FRNGACSCKDFW 672
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I + +C +AR+ FD++++R+ SW MI GY G + L +F QM+K
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P K V +ACA+ A+ +G K + + G+ +++ + G + A E
Sbjct: 300 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG-TSLVDMYAKCGRIDLAWE 358
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVE 314
E+M V W A+ +HG E
Sbjct: 359 VFEKMS-NKEVSSWNAMIGGLAMHGRAE 385
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-----ARKVFDQLRKRNLSSWHLMIS 202
K+ H L+ + ++D + L++ Y R + +VFD +RK N+ W+ MI
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGI 261
N + ++L+ +M P+K T+ V AC+ A V EG ++ ++K+ G
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG- 169
Query: 262 VPGIEHYI-AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G H + + I++ S G L+EA ++ E W A+ + G+VE
Sbjct: 170 --GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE 221
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 199/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ + + + ++ F DV L +I+M+ KC AR++FD++ ++
Sbjct: 338 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 397
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y +GQG L LF M ++G P+K T + + AC+ A V+EG +F
Sbjct: 398 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 457
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M DY + ++HY ++ +LG AG L EA + +E M E +W A + H D
Sbjct: 458 SLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 517
Query: 313 VELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNMLE 351
V L ++A L +L P D + KK +E
Sbjct: 518 VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 577
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+ + D YE +K L ++ GYVPDT +VLHD+DEE K L H
Sbjct: 578 VDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSH 637
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+TP P+RIIKNLR+CGDCH K++S I GR +IVRD RFHHF++G
Sbjct: 638 SEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEG 697
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 698 ACSCGDYW 705
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 8/184 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SLL +C +LK+++MG+ +H ++ D + L++MYGKC AR +FD++
Sbjct: 235 LASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP 294
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+L +W +MI GYA G + L+LF++MR+ G PDK + V ACA A+ +
Sbjct: 295 ERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKART 354
Query: 251 ---YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
Y + K ++ G A+I + G + A E +RM E V W A+
Sbjct: 355 IDDYIQRKKFQLDVILG----TAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAY 409
Query: 308 QIHG 311
HG
Sbjct: 410 GYHG 413
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C +LK+++MG+ +H ++ D + L++MY KC AR +FD++++R+
Sbjct: 36 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 95
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL--- 250
L +W +MI GYA G+ + L+LFE+MR+ G PDK + V ACA A+ + +
Sbjct: 96 LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 155
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + K ++ G A+I + G + A E +RM E V W A+ H
Sbjct: 156 YIQRKKFQLDVILG----TAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 210
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLP 339
G +A +L + S + DKI L
Sbjct: 211 GQGR---KALDLFRMMLSSGMLPDKITLA 236
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ + + + ++ F DV L +I+MY KC AR++FD++ ++
Sbjct: 136 TVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK 195
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y +GQG L LF M +G PDK T + AC+ + ++ G L
Sbjct: 196 NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIH 255
Query: 253 EIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
I+ Y ++H++ A++ + G + +A ++MP E + W +
Sbjct: 256 HIV---YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVM 304
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 214/397 (53%), Gaps = 33/397 (8%)
Query: 109 GKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK +EAI ++A ++L +C +L ++++G R+HE F ++V ++
Sbjct: 206 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 265
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI+MY KC A KVF+++ +R + SW MI G A +G+ + L LF M + G
Sbjct: 266 NTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 325
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+ + AC+ + EG +F M DYGI+P IEHY ++ +L AG L EA E
Sbjct: 326 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 385
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA 346
F+ MP +P VW AL ++H +VE+ + A + L +LDP + D + +
Sbjct: 386 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP---LNDGYYVVLSNIYAE 442
Query: 347 TNMLEEKNRVSDYRST-------------------DLYRGE---------YEKMKGLNGQ 378
E+ RV + + GE +++ + L +
Sbjct: 443 AGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEE 502
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
MR GYVP+T VL DI+E K K + HSE+LA+ +GL++TP P+RI+KNLRIC DC
Sbjct: 503 MRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDC 562
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H+A K++S IV RE++VRD RFH F D CSC DYW
Sbjct: 563 HSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ K SW MI+GY G+ + + LF +M + G ++ T + V AACA A+ G
Sbjct: 187 VEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG 246
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
E N +G + +I + G L EA + E M E TV W A+
Sbjct: 247 MRIHE-YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLA 304
Query: 309 IHGDVELEDRAEELL 323
+HG RAEE L
Sbjct: 305 MHG------RAEEAL 313
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 208/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL SC L +++ G +H+ + F +V L LI MY +C N AR+VFD +++R
Sbjct: 295 SLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKER 354
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W MISGY +G G + LF +MR GP P+ TF+ V +ACA + + +G F
Sbjct: 355 NVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVF 414
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER-MPFEPTVEVWEALRNFAQIHG 311
MK YG+VPG+EH + ++ + G AG L +A +F+++ +P EP VW ++ ++H
Sbjct: 415 SSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHR 474
Query: 312 DVELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNML 350
+ +L + E L G +D + + + + KKQ + +
Sbjct: 475 NFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTI 534
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + + D + Y + L + E+GYVP ++HD++EE ++ AL+Y
Sbjct: 535 EINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRY 594
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+GL+ T +RI+KNLRIC DCH+AIK +S I RE+IVRD RFHHF+D
Sbjct: 595 HSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKD 654
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 655 GSCSCLDYW 663
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 10/186 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S++ +C +L ++ +GK +H + + D+ + LI +Y K + ++A+KVFD +
Sbjct: 191 TFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAM 250
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + +W+ +ISGY NG + + LF M ++G PD T + + ++C+ + G
Sbjct: 251 PQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS-----QLGA 305
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
L F +DY G + + ++I + G++ +A E + M E V W A+ +
Sbjct: 306 LDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMIS 364
Query: 306 FAQIHG 311
+HG
Sbjct: 365 GYGMHG 370
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 206/370 (55%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS L C L ++++G+++H+++ S DV LI MY KC A K+F+ ++
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+++ +W+ MISGYA +G L LF +M PD TF+ V AC A V G
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE M DY + P +HY ++ +LG AG L EA + + MPF P V+ L ++H
Sbjct: 407 YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466
Query: 311 GDVELEDRAEELLGDLDPSKA---------------IVDKIPLPPRKKQS------ATNM 349
+VEL + A E L L+ A D + R K+S +
Sbjct: 467 KNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSW 526
Query: 350 LEEKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V +RS+D E + + K L +M+ AGY P+ + LH+++EE KEK L
Sbjct: 527 IEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLL 586
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LA+A+G I P +++ KNLRICGDCH AIK +S+I RE+IVRD RFHHF+
Sbjct: 587 WHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFK 646
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 647 DGSCSCGDYW 656
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVF-DQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
V+ V +I Y K LA +F D +NL +W+ MISGY N + DGL LF
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M + G P+ C+ A++ G +I+ + + ++I +
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKC 332
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G L +A + E M + V W A+ + HG+ +
Sbjct: 333 GELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 367
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 218/373 (58%), Gaps = 35/373 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-K 191
++LD+C ++ G+ VH+ LR S ++ + L MYG+C + AR++F+++ +
Sbjct: 536 AVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ ++ MI+ Y+ NG + L LF +M++ G PD+++F+ V +AC+ EG+
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M+ YGI P +HY + VLG AG L +AEE + M +PTV VW+ L + +
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 312 DVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPR--KKQSATNML 350
DV+ A ++ +LDP +A + + R +K++ + +
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWI 775
Query: 351 EEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
E K+RV ++ RS ++YR +++ L+ ++RE GYVPDTR VL +DE KE+
Sbjct: 776 EIKSRVHEFVAGDRSHPRSEEIYR----ELERLHAEIREIGYVPDTRLVLRKVDEAEKER 831
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSERLAIA G++S+ +R++KNLR+C DCHNA K +SKIV +E++VRD RFH
Sbjct: 832 LLCQHSERLAIALGVMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFH 890
Query: 463 HFRDGKCSCGDYW 475
HF DG CSCGDYW
Sbjct: 891 HFVDGSCSCGDYW 903
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+L+++ S+ G+ +H +D+ L N L++MY +C + AR +F ++
Sbjct: 328 TLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PC 386
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS----AEAVKEG 248
N SW+ MI+G + GQ + LF++M+ G P + T+L + A AS A A+ EG
Sbjct: 387 NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEG 446
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV--WEALRN 305
L+ I+ Y P I A++K+ S G + EA +R E +V W A+ +
Sbjct: 447 RKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIIS 504
Query: 306 FAQIHG 311
HG
Sbjct: 505 SLSQHG 510
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L +C L + G+ +H + S L N L+ +YG C A +F+++
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM- 189
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+L SW+ I+ A +G L LF++M+ G P + T ++ CA+ + +
Sbjct: 190 ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQA--I 247
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSA----GHLIEAEEFVERMPFEPTVEVWEALRNF 306
+F + ++ G+E + + L SA GHL +A+E +R E V W A+
Sbjct: 248 HFIVRES------GLEQTLVVSTALASAYARLGHLYQAKEVFDRAA-ERDVVSWNAMLGA 300
Query: 307 AQIHG 311
HG
Sbjct: 301 YAQHG 305
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL + G+ + + G+R+H R + + EL N L+ +Y KC + +VF +L R+
Sbjct: 35 LLRAAGDDRLLSQGRRIHA--RIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+SW +I+ Y +GQ + +F +M++ G D TFL V ACA + +G
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR---KRNLSSWH 198
+++ G+++H + + + + + +++MY C A F + + ++ SW+
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
+IS + +G G L F +M G P++ T + V ACA A A+ EG + + +++
Sbjct: 501 AIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS 560
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ + A+ + G G L A E E++ E V ++ A+
Sbjct: 561 -GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+I + +H ++R S + + ++ L Y + + A++VFD+ +R++ SW+ M+
Sbjct: 240 TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLG 299
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
YA +G ++ +LF +M G P K T + C+S L F M + +
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS--------LRFGRMIHGCALE 351
Query: 263 PGIEHYI----AIIKVLGSAGHLIEAEEFVERMP 292
G++ I A++ + G EA +R+P
Sbjct: 352 KGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP 385
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 198/368 (53%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ + + + ++ F DV L +I+M+ KC AR++FD++ ++
Sbjct: 942 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 1001
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y +GQG L LF M ++G P+K T + + AC+ A V+EG +F
Sbjct: 1002 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 1061
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M DY + ++HY ++ +LG AG L EA + + M E +W A + H D
Sbjct: 1062 SXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKD 1121
Query: 313 VELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNMLE 351
V L ++A L +L P I D + KK +E
Sbjct: 1122 VXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIE 1181
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+ + D YE +K L ++ GYVPDT +VLHD+DEE K L H
Sbjct: 1182 VDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTH 1241
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+TP P+RIIKNLR+CGDCH K++S I GR +IVRD RFHHF++G
Sbjct: 1242 SEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEG 1301
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 1302 ACSCGDYW 1309
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 164/326 (50%), Gaps = 25/326 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ + + + ++ F DV L +I+MY KC AR++FD++ ++
Sbjct: 266 TVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK 325
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y +GQG L LF M +G PDK T + AC+ A V+EG +F
Sbjct: 326 NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFF 385
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M DY + ++HY ++ +LG AG L EA + ++ M E +W A + H D
Sbjct: 386 SSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKD 445
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
V L ++A L G + I D + KK +E
Sbjct: 446 VVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIE 505
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+ + D YE +K L+ ++ GYVPDT +VLHD+DEE K L H
Sbjct: 506 VDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTH 565
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLR 433
SE+LAIA+GLI+TP P+RIIKNLR
Sbjct: 566 SEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C +LK+++MG+ +H ++ D + L++MY KC AR +FD++++R+
Sbjct: 166 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 225
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL--- 250
L +W +MI GYA G+ + L+LFE+MR+ G PDK + V ACA A+ + +
Sbjct: 226 LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 285
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + K ++ G A+I + G + A E +RM E V W A+ H
Sbjct: 286 YIQRKKFQLDVILG----TAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 340
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPL 338
G +A +L + S + DKI L
Sbjct: 341 GQGR---KALDLFPMMLSSGMLPDKITL 365
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C +LK+++MG+ +H ++ D + L++MYGKC AR +FD++ +R+
Sbjct: 842 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERD 901
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL--- 250
L +W +MI GYA G + L+LF++MR+ G PDK + V ACA A+ +
Sbjct: 902 LVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDD 961
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + K ++ G A+I + G + A E +RM E V W A+ H
Sbjct: 962 YIQRKKFQLDVILG----TAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 1016
Query: 311 G 311
G
Sbjct: 1017 G 1017
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S L +C NL + ++VH ++++ + NKLI Y A +FD +
Sbjct: 65 YISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 121
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ SW +M+ G+A G + F ++ + G PD T V AC + ++ G L
Sbjct: 122 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 181
Query: 251 YFEIMKNDYGIVPGIEHYIA 270
I+ Y ++H++
Sbjct: 182 IHHIV---YKFGLDLDHFVC 198
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
++VH ++++ + NKL+ Y A +FD + R+ SW +M+ G+A
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G + F ++ + G PD T V AC + ++ G L I+ Y ++H
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV---YKFGLDLDH 871
Query: 268 YI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ A++ + G + +A ++M E + W +
Sbjct: 872 FVCAALVDMYGKCREIEDARFLFDKMX-ERDLVTWTVM 908
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 214/397 (53%), Gaps = 33/397 (8%)
Query: 109 GKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK +EAI ++A ++L +C +L ++++G R+HE F ++V ++
Sbjct: 239 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 298
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI+MY KC A KVF+++ +R + SW MI G A +G+ + L LF M + G
Sbjct: 299 NTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+ + AC+ + EG +F M DYGI+P IEHY ++ +L AG L EA E
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA 346
F+ MP +P VW AL ++H +VE+ + A + L +LDP + D + +
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP---LNDGYYVVLSNIYAE 475
Query: 347 TNMLEEKNRVSDYRST-------------------DLYRGE---------YEKMKGLNGQ 378
E+ RV + + GE +++ + L +
Sbjct: 476 AGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEE 535
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
MR GYVP+T VL DI+E K K + HSE+LA+ +GL++TP P+RI+KNLRIC DC
Sbjct: 536 MRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDC 595
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H+A K++S IV RE++VRD RFH F D CSC DYW
Sbjct: 596 HSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 39/223 (17%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C NL + G+ +H ++ F ++ L N ++ +Y C AR +F+++ +
Sbjct: 132 SSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQ 191
Query: 192 RNLSSWHL-------------------------------MISGYAANGQGADGLMLFEQM 220
R++ +W++ MI+GY G+ + + LF +M
Sbjct: 192 RDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM 251
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ G ++ T + V AACA A+ G E N +G + +I + G
Sbjct: 252 EEAGVKCNEVTVVAVLAACADLGALDLGMRIHE-YSNRHGFKRNVRISNTLIDMYVKCGC 310
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
L EA + E M E TV W A+ +HG RAEE L
Sbjct: 311 LEEACKVFEEME-ERTVVSWSAMIGGLAMHG------RAEEAL 346
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 210/413 (50%), Gaps = 25/413 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
P+R ++ + + G + M +DA SS+L C NL ++ G
Sbjct: 193 PVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFG 252
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
++VH+ + + + L+ MY KC + A K+FD++ +++ +W+ MISGYA +
Sbjct: 253 RQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQH 312
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G G + LFE+M+ G PD T L V AC G FE M+ Y I P ++H
Sbjct: 313 GGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDH 372
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
Y ++ +L AG L A + MPFEP + L +++ ++E + A L + D
Sbjct: 373 YSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQD 432
Query: 328 PSKA-----IVDKIPLPPRK----------------KQSATNMLEEKNRVSDYRSTDLYR 366
P A + + + R K + +E K ++RS D
Sbjct: 433 PQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLH 492
Query: 367 GE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
+ ++K+ L M+ GY PD + LHD++E K + L HSE+LAIA+GLIST P
Sbjct: 493 PQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSP 552
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
M LRI KNLRICGDCHNA K++SKI RE+I+RD RFHHFR G CSCGDYW
Sbjct: 553 GMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREA-IEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
P+R + S + + L K G + EA + A + ++ + S G++ + E
Sbjct: 99 PVR---DVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAE- 154
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
L R + D L ++ Y N + A + F + RNL SW+ +++GY
Sbjct: 155 -----NLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVK 209
Query: 207 NGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
N + D L +F+ M + P+ T V C++ A+ G
Sbjct: 210 NSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFG 252
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 198/371 (53%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C +L + G H F D + N LI+MY KC ARKVFD++
Sbjct: 429 LASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH 488
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR + SW+ MI Y +G G + L+LF+ M+ G PD TF+ + +AC+ + V EG
Sbjct: 489 KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKY 548
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M D+GI+P +EHY ++ +L AG E F+E+MP EP V VW AL + +++
Sbjct: 549 WFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVY 608
Query: 311 GDVELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSATNMLEEKNRVSD------- 358
+VEL + + + L P + + R +A +K + +
Sbjct: 609 KNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSW 668
Query: 359 --------------YRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
YRS K+ L +M+ GY ++ YV D++EE KE+ L
Sbjct: 669 IEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVL 728
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIA+G++S P + + KNLR+CGDCH AIK +S + R++ VRD RFHHF
Sbjct: 729 LYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHF 788
Query: 465 RDGKCSCGDYW 475
+DG C+CGD+W
Sbjct: 789 KDGICNCGDFW 799
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 111 VREAIEYMGQ-----DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
+REA+E Q D ++++ C NL + G +H S FV D+ +
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N L+ MY KC A + F+++ R+ S+ +ISGY NG +GL +F +M+ +G
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHL 281
+P+K T V ACA L++ + Y I+ G A+I + G +
Sbjct: 423 NPEKATLASVLPACAHLAG-----LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKI 477
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + +RM V W + IHG
Sbjct: 478 DTARKVFDRMHKRGIVS-WNTMIIAYGIHG 506
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNN------KLIEMYGKCCNTRLARK 184
+ LL+SC KS+ GK +H+ LL+ + L N KL+++Y C ++AR
Sbjct: 13 TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARH 72
Query: 185 VFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
VFD++ R +N+ W+L+I YA NG + + L+ +M G P++ TF V AC++
Sbjct: 73 VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132
Query: 243 EAVKEG 248
+ EG
Sbjct: 133 KEASEG 138
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C LK G+ +H ++ +V ++ L++ Y KC A++VFD++
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH 181
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
KR++ +W+ MISG++ + D + + P+ T + V A A +++ G
Sbjct: 182 KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHG 239
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KR 192
+L + + S+ GK +H FV DV + ++++YGKC AR++FD + +
Sbjct: 226 VLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVK 285
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQM 220
N +W M+ Y + L LF Q+
Sbjct: 286 NEVTWSAMVGAYVVCDFMREALELFCQL 313
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 206/373 (55%), Gaps = 28/373 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF--DQ 188
+S L +C NL +++ G+ +H + S + L L++MY KC A KVF +
Sbjct: 252 LASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEY 311
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K + W+ MI GYA +G+ + + LFEQM+ P+K TF+ + AC+ + V+EG
Sbjct: 312 GLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEG 371
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF+ M + YGI P IEHY ++ +LG +G L EAEE V MP P +W AL +
Sbjct: 372 RGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACR 431
Query: 309 IHGDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSAT 347
IH D+E R +++ G D +KA+ KI + RKK
Sbjct: 432 IHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGC 491
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAKEK 402
+ +E + RS + Y + + +++ AGYVP+ VL DID EE KE
Sbjct: 492 SSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKET 551
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
AL HSE+LAIA+GLI+TPP +RI+KNLR+C DCH A K +SK+ RE+IVRD R+H
Sbjct: 552 ALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYH 611
Query: 463 HFRDGKCSCGDYW 475
HF+DG CSC DYW
Sbjct: 612 HFKDGFCSCKDYW 624
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 131 FSSLLDSCGNLKSIEMGK--RVHEL---LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F + +CGN + G+ RVH + L ++ FV N +I MY AR+V
Sbjct: 120 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFV-----TNAMIRMYANWGLVDEARRV 174
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGA-------------------------------DGL 214
FD ++L SW++MI GY +G+ + L
Sbjct: 175 FDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEAL 234
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
LF +M +TGP P++ T AACA+ A+ +G
Sbjct: 235 DLFHEMLQTGPPPNEFTLASALAACANLVALDQG 268
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKR 192
L+SC KS+ K+ H L T+ + NKL+++ L A ++FDQ+ K
Sbjct: 22 LESC---KSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKP 78
Query: 193 NLSSWHLMISGYAANGQGADGLM--LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ ++ MI +A + M +R +G P++ TF+ VF AC + V EG
Sbjct: 79 DVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEG 136
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 219/376 (58%), Gaps = 34/376 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ C NL +E+GK++H L+ F + ++N L++MY KC + A+ +F ++
Sbjct: 240 VLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRM 299
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ SW +I G A +G+ + L L+++M + P++ TF+ + AC+ A V G
Sbjct: 300 PRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGR 359
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M DY I P ++HY ++ +L +GHL EAE ++++PF+P W +L +
Sbjct: 360 ELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMR 419
Query: 310 HGDVELEDRAEELLGDL---DPSKAI--------------VDKIPLPPRKKQSATNMLEE 352
H ++E+ R + + DL DPS I V K+ RK S+ + +E
Sbjct: 420 HNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKV----RKLMSSMEVRKE 475
Query: 353 KNRVS-DY--RSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
S D+ S + GE +K L+ +MR+ GYVP+T +VL+DI+++
Sbjct: 476 PGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQE 535
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KEK L +HSERLA+AYGL+ P +RI+KNLRICGDCHN +K +S IV RE++VRD
Sbjct: 536 KEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDAT 595
Query: 460 RFHHFRDGKCSCGDYW 475
R+HHF++GKCSC D+W
Sbjct: 596 RYHHFKEGKCSCNDFW 611
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+ ++ +C +L + +GK+VH S F D + + LI+MY KC AR VFD +
Sbjct: 107 VFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSI 166
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+N SW MISGYA +G+ + + LF Q
Sbjct: 167 LFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L C +S +H + + F K L+N L+++YGKC A ++FD++
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ SW +++ + L ML G PD F + AC+S ++ G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLG 124
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 210/376 (55%), Gaps = 35/376 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ L SC ++E+G+ VH + + N L+ MY K + R ARKVFD
Sbjct: 145 VVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVFDAT 204
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R R +W +I GYA NG+G + L ++ +M +G PD TF+ + AC+ A V G
Sbjct: 205 RLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLVDAGR 264
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+ M+ D+GI PG +HY ++ VLG AG L EA E +++ + VW+AL +
Sbjct: 265 AHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALLGACRT 324
Query: 310 HGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPRKKQSA------ 346
H + EL +RA E++ LDP+ A+ V +I + + A
Sbjct: 325 HRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTLMKSRGIAKEPGCS 384
Query: 347 -------TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
T++ ++R R+ ++YR E M+ ++R G+V DT + L D E
Sbjct: 385 WVVASGVTHLFYVEDR-GHPRTDEIYRKVEEMME----KVRAEGFVADTDWALQDEAPEG 439
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
+EK L +HSERLA+A+GL++ P P+R+ KNLR+CGDCH AIK+++K+ GRE+I+RD+
Sbjct: 440 REKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVAKVYGREIILRDSN 499
Query: 460 RFHHFRDGKCSCGDYW 475
FHH RDG CSCGDYW
Sbjct: 500 CFHHMRDGVCSCGDYW 515
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L+S L+ +H LL + V + + N L++ Y K AR +FD++
Sbjct: 45 FPPILNSAALLRVPAAADALHALLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMP 104
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W +++G A +G L ++ M +G PD+ ++CA + ++ G
Sbjct: 105 RRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELG-Q 163
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ P + +++ + G L EA + + V W AL
Sbjct: 164 SVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVFDATRLRCPV-TWTAL 215
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 208/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL SC L +++ G +H+ + F +V L LI MY +C N AR+VFD +++R
Sbjct: 231 SLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKER 290
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W MISGY +G G + LF +MR GP P+ TF+ V +ACA + + +G F
Sbjct: 291 NVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVF 350
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER-MPFEPTVEVWEALRNFAQIHG 311
MK YG+VPG+EH + ++ + G AG L +A +F+++ +P EP VW ++ ++H
Sbjct: 351 SSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHR 410
Query: 312 DVELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNML 350
+ +L + E L G +D + + + + KKQ + +
Sbjct: 411 NFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTI 470
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + + D + Y + L + E+GYVP ++HD++EE ++ AL+Y
Sbjct: 471 EINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRY 530
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+GL+ T +RI+KNLRIC DCH+AIK +S I RE+IVRD RFHHF+D
Sbjct: 531 HSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKD 590
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 591 GSCSCLDYW 599
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 10/186 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S++ +C +L ++ +GK +H + + D+ + LI +Y K + ++A+KVFD +
Sbjct: 127 TFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAM 186
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R + +W+ +ISGY NG + + LF M ++G PD T + + ++C+ + G
Sbjct: 187 PQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS-----QLGA 241
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
L F +DY G + + ++I + G++ +A E + M E V W A+ +
Sbjct: 242 LDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMIS 300
Query: 306 FAQIHG 311
+HG
Sbjct: 301 GYGMHG 306
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 206/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS++D+C + +++G++ H + + +++ L+ MY + + A+ +F++
Sbjct: 508 ISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQ 567
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ M+SGYA +G L +F QM G D TFL V CA A V+EG
Sbjct: 568 TDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQ 627
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M DYGI P +EHY ++ + AG L EA +E M F VW L ++
Sbjct: 628 RYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKV 687
Query: 310 HGDVELEDRAEELLGDLDP--------------------SKAIVDKIPLPPR-KKQSATN 348
H +VEL A E L L+P K V K+ + KK++ +
Sbjct: 688 HKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCS 747
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ KN+V + ++D L Y K++ + ++++ GY PDT + LH++ EE KE L
Sbjct: 748 WIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAML 807
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLA+A+GLI+TPP PL I KNLR+CGDCH IK++SKI RE+++RD RFHHF
Sbjct: 808 AMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHF 867
Query: 465 RDGKCSCGDYW 475
G CSCGD+W
Sbjct: 868 NSGVCSCGDFW 878
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 68 PSSNEQEPKTGTGHSQNTND-PLRGNAQLESLDVNLLSLCKEGKVREAIEY---MGQDAS 123
P N+ TG Q ++ P R +LD L + G V +A+++ + +
Sbjct: 44 PLENQTNLNDATGARQAFDEIPHR-----NTLDHALFDHARRGSVHQALDHFLDVHRCHG 98
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
G +L CG++ +GK++H L +R DV + L++MY K +
Sbjct: 99 GRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDG 158
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
RKVF+ + KRN+ +W +++GY +G +D + LF +MR G P+ TF V + AS
Sbjct: 159 RKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQ 218
Query: 243 EAVKEG 248
V G
Sbjct: 219 GMVDLG 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L + +++G+RVH V + N L+ MY KC AR VF +
Sbjct: 208 FASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGME 267
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R++ SW+ +++G NG + L LF R + + T+ V CA+ + +
Sbjct: 268 TRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQ 327
Query: 250 LYFEIMK---NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
L+ ++K + YG V A++ AG L A + M V W A+ N
Sbjct: 328 LHSSVLKRGFHSYGNV-----MTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMING 382
Query: 307 AQIHGDVEL 315
+GDV L
Sbjct: 383 CIQNGDVPL 391
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ Y K CNT A +F + ++++ SW M++ YA G +F +M G
Sbjct: 441 VGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHG 500
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T V ACAS A + F + + + A++ + G + A
Sbjct: 501 LKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA 560
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ER V L +AQ HG
Sbjct: 561 QCIFERQTDRDLVSWNSMLSGYAQ-HG 586
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 11/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++++ C N+K + + +++H + F + L++ Y K A +F +
Sbjct: 309 YATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMS 368
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW MI+G NG LF +MR+ G P+ T+ + A ++ +
Sbjct: 369 GSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQ--- 425
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE--RMPFEPTVEVWEALRNFA 307
++ +++K +Y I +L S L EE + +M + V W A+
Sbjct: 426 IHAQVIKTNYECTS-----IVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCY 480
Query: 308 QIHGD 312
GD
Sbjct: 481 AQAGD 485
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 219/376 (58%), Gaps = 34/376 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ C NL +E+GK++H L+ F + ++N L++MY KC + A+ +F ++
Sbjct: 240 VLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRM 299
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ SW +I G A +G+ + L L+++M + P++ TF+ + AC+ A V G
Sbjct: 300 PRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGR 359
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M DY I P ++HY ++ +L +GHL EAE ++++PF+P W +L +
Sbjct: 360 ELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMR 419
Query: 310 HGDVELEDRAEELLGDL---DPSKAI--------------VDKIPLPPRKKQSATNMLEE 352
H ++E+ R + + DL DPS I V K+ RK S+ + +E
Sbjct: 420 HNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKV----RKLMSSMEVRKE 475
Query: 353 KNRVS-DY--RSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
S D+ S + GE +K L+ +MR+ GYVP+T +VL+DI+++
Sbjct: 476 PGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQE 535
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KEK L +HSERLA+AYGL+ P +RI+KNLRICGDCHN +K +S IV RE++VRD
Sbjct: 536 KEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDAT 595
Query: 460 RFHHFRDGKCSCGDYW 475
R+HHF++GKCSC D+W
Sbjct: 596 RYHHFKEGKCSCNDFW 611
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+ ++ +C +L + +GK+VH S F D + + LI+MY KC AR VFD +
Sbjct: 107 VFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSI 166
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+N SW MISGYA +G+ + + LF Q
Sbjct: 167 LFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L C +S +H + + F K L+N L+++YGKC A ++FD++
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ SW +++ + L ML G PD F + AC+S ++ G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLG 124
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 209/374 (55%), Gaps = 26/374 (6%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y F S+L C L + + G+ +H + +F DV + LI MY KC N A++VF+
Sbjct: 333 YTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFN 392
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+++ W+ MI+GYA +G G + L +F+ +R PD T++ V AC+ VKE
Sbjct: 393 MFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKE 452
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F M + I G HY ++ +LG AG + EA + + MP EP +W AL
Sbjct: 453 GREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGAC 512
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD 363
++H + E+ + A + L +L+P A ++ I + + A++M + + + +S
Sbjct: 513 RMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPG 572
Query: 364 LYRGEYEKM----------------------KGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
EY KM + L+G + E+GY D +VLHD+DEE K
Sbjct: 573 CSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKA 632
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
++L+YHSER A+AYGL+ P MP+R++KNLR+CGDCH+AIK+++KI RE+I+RD RF
Sbjct: 633 QSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRF 692
Query: 462 HHFRDGKCSCGDYW 475
HHF+DG CSC DYW
Sbjct: 693 HHFKDGLCSCRDYW 706
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 60/154 (38%), Gaps = 41/154 (26%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KDV ++ Y + AR +FD++ KRN+ SW MISGYA NG+ LFE M
Sbjct: 172 KDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM 231
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
PD+ S A+ G++ AGH
Sbjct: 232 ------PDRNE--------VSWTAMLVGYI--------------------------QAGH 251
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ +AE+ MP P + F Q HG V+
Sbjct: 252 VEDAEDLFNAMPDHPVAACNAMMVGFGQ-HGMVD 284
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 218/407 (53%), Gaps = 29/407 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S + +L + G E++ + A +G D F ++L +C + ++ G +H L
Sbjct: 331 SWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYL 390
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
F + + L++MY KC + +R+VFD++ ++L SW M++GY +G+G + +
Sbjct: 391 VKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAI 450
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
+ + M+ PD F + +AC+ A V EG F M+ +Y + P + HY ++ +
Sbjct: 451 SILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDL 510
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD 334
LG AGHL EA + M +PT ++W AL +++H +++L + + + + D++P K +
Sbjct: 511 LGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNP-KVVSS 569
Query: 335 KIPLP----------------------PRKKQSATNMLEEKNRVSDYRSTDLYRGE---- 368
I L KK + +E N V + D +
Sbjct: 570 YICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDI 629
Query: 369 YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
Y K+ L Q++EAGY PDT V +D++EE KEK L HSERLAIA+ LI+T P +RI
Sbjct: 630 YAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRI 689
Query: 429 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+CGDCH K++S++ GRE+I+RD RFHHF G CSCGDYW
Sbjct: 690 TKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 11/175 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +CG+L +E+G+RVH + D+ + N L+ MY K + AR VFD++ +R+
Sbjct: 167 VLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERD 226
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L+SW+ MISGYA N ++F+ M K G D T L + +ACA +AVKEG +
Sbjct: 227 LTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVI-- 284
Query: 254 IMKNDYGIVPGIEHY-----IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ Y + I +Y ++I++ + +++A ER+ ++ TV W ++
Sbjct: 285 ---HGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVS-WNSM 335
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNN 167
G + MG+ A A LL +C +LK+++ GK +H +R S + N
Sbjct: 244 GTAFLVFDLMGK-AGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTN 302
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
LIEMY C AR++F+++R ++ SW+ MI GYA NG + L LF +M G P
Sbjct: 303 SLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGP 362
Query: 228 DKETFLVVFAACASAEAVKEGF-LYFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEA 284
D+ TF+ V AC A++ G ++ ++K D + G A++ + G L +
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVG----TALVDMYSKCGSLACS 418
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ MP + V W A+ +HG R E + LD KA
Sbjct: 419 RRVFDEMPDKSLVS-WSAMVAGYGLHG------RGREAISILDGMKA 458
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+LL S N KS + G+++H ++ S + LN KL Y C A +FD +
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N W+ MI GYA+NG L+L+ +M G D T+ V AC V+ G
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIG 180
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 233/451 (51%), Gaps = 56/451 (12%)
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREA----------------IEYMGQDASA 124
H+ GN + S V++ S C+ ++ EA I GQ+
Sbjct: 304 HAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCG 363
Query: 125 SAGYDVFS---------------SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
VFS S++ SC NL S+E G + H + S + +++ L
Sbjct: 364 EEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSAL 423
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ +YGKC + A ++FD++ + S+ ++SGYA G+ + + LFE+M G P+
Sbjct: 424 VTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNG 483
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
TF+ V +AC+ + V++G YF M+ D+GIV +HY +I + +G L EAEEF+
Sbjct: 484 VTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIR 543
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------SKAIVDK 335
+MP P W L + ++ GD+E+ A E L DP SK +
Sbjct: 544 QMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSE 603
Query: 336 IPLPPR-------KKQSATNMLEEKNRVSDYRSTDL---YRGE-YEKMKGLNGQMREAGY 384
+ L R KK+ + ++ KNRV + + D + G YEK++ LN +M E GY
Sbjct: 604 VALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGY 663
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
PD VLHD+ + K L HSE+LAIA+GLI P MP+R++KNLR+C DCHNA K
Sbjct: 664 KPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKF 723
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+SKI GR+++VRD RFH F +G CSCGD+W
Sbjct: 724 ISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G EA++ + + G D F S+L +CG L + E GK++H + + +
Sbjct: 256 LTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGN 315
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + + L++MY KC + RLA VF ++ +N+ SW MI GY NG G + + +F +M+
Sbjct: 316 IFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQT 375
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
G P+ T V ++CA+ +++EG F M G+ P I A++ + G G +
Sbjct: 376 DGIKPNDFTLGSVISSCANLASLEEG-AQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+A + MPF V + +AQ E D E++L
Sbjct: 435 DAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKML 475
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L+D + I KRV + + VK+V + N +I +C AR VF+ +
Sbjct: 187 WSPLVDMYAKMGLIGDAKRVFDEM----VVKNVVMYNTMITGLLRCKMVEEARGVFEAMV 242
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ +W M++G NG ++ L +F +MR G D+ TF + AC + A +EG
Sbjct: 243 DRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEG 300
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 212/369 (57%), Gaps = 28/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+L +C + +++GK VH ++R F D + +I+MY KC + AR VFDQ+
Sbjct: 312 SVLLACSQVGFLKLGKSVHGYIVRRLHF--DCVSSTAVIDMYSKCGSLSFARTVFDQISF 369
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+ SW+ +I+ Y +G G + L LF QMR+T PD TF + +A + + V++G +
Sbjct: 370 RDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYW 429
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F IM N+Y I P +HY ++ +L AG + EA+E +E M EP + +W AL + HG
Sbjct: 430 FSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489
Query: 312 DVELEDRAEELLGDLDPSK----AIVDKIPLPPR-----------------KKQSATNML 350
+ + A + + +L+P ++V R KK +++
Sbjct: 490 KFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVM 549
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E ++ + D +YE++ + G +M+ GYVP T +VLH+++EE KE+ L
Sbjct: 550 EVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCN 609
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAIA+GL++T P L I KNLR+CGDCH A K +SKIV RE++VRD KRFHHF+D
Sbjct: 610 HSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKD 669
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 670 GVCSCGDYW 678
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGK 148
G L + L + G+ REA++ Q D V L+ +C L +MG
Sbjct: 167 GRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGL 226
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H + + DV + L++MY K + LA VF ++ +N+ SW +ISG+A NG
Sbjct: 227 SIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNG 286
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+ L L M+ G PD + + V AC+ GFL ++ K+ +G + H+
Sbjct: 287 FAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQV-----GFL--KLGKSVHGYIVRRLHF 339
Query: 269 -----IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A+I + G L A +++ F ++ W A+ IHG E
Sbjct: 340 DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSIS-WNAIIASYGIHGSGE 389
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 9/235 (3%)
Query: 80 GHSQNTNDPLRGNAQ--LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLL 135
GH ++ + Q +++ + +++ + G + EA+ + AS D ++ +L
Sbjct: 53 GHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVL 112
Query: 136 DSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS 195
+C + G+ + DV + ++ +Y KC A +VFD++ +R+L
Sbjct: 113 KACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLV 172
Query: 196 SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEI 254
W MI+G A NGQ + + ++ QM K D L + AC + K G ++ +
Sbjct: 173 CWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYM 232
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
++ D I+ + +++ + GHL A RM ++ + W AL FAQ
Sbjct: 233 IRKD--IIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVIS-WSALISGFAQ 284
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H L+ + N KLI+ Y + + AR+VFD+ + + +W+ MI Y+ G
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ L L+ +M G PD T+ VV AC + ++ G
Sbjct: 85 AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSG 124
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 207/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS + SC L + G++ H L F + N LI MY KC AR+VF +
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ SW+ +I+ +G GA+ + ++E+M K G PD+ T L V AC+ A V +G
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M+ Y I PG +HY +I +L +G +AE +E +PF+PT E+WEAL + ++H
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 311 GDVEL--------------EDRAEELLGDLDPSKAIVDKIPLPPR-------KKQSATNM 349
G++EL D LL ++ + +++ + KK+ A +
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA-KEKAL 404
+E + +V + D E Y ++ L +MR GYVPDT +VLHD++ + KE L
Sbjct: 660 IEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDML 719
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+GL+ PP +RI KNLR CGDCHN + +S +V R++I+RD KRFHHF
Sbjct: 720 TTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHF 779
Query: 465 RDGKCSCGDYW 475
R+G+CSCG++W
Sbjct: 780 RNGECSCGNFW 790
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 41/268 (15%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKR 149
N +L + + + G +EA+E + + S+ D F+ S++ +C +++GK+
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 150 VHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY---- 204
VH +LR F +N L+ +Y KC AR +F+++ ++L SW+ ++SGY
Sbjct: 308 VHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 205 ---------------------------AANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
A NG G +GL LF M++ G P F
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 238 ACASAEAVKEGFLYF-EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
+CA A G Y +++K G + A+I + G + EA + MP +
Sbjct: 426 SCAVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 297 VEVWEALRNFAQIHG-DVELEDRAEELL 323
V W AL HG E D EE+L
Sbjct: 484 VS-WNALIAALGQHGHGAEAVDVYEEML 510
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 45/178 (25%)
Query: 165 LNNKLIEMYGKCCNT----RLARKVFDQLRKRNLSSWHLMISGYAANG---------QGA 211
++N L+ +Y KC ++ ARKVFD++ +++ SW M++GY NG +G
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 212 D-----------------------GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
D L + +M +G D+ T+ V ACA+A ++ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 249 --FLYFEIMKNDYGIVPGIEHYI-AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + + D+ H+ +++ + G EA E+MP + V W AL
Sbjct: 306 KQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNAL 357
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 33/131 (25%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK----------- 191
S+++ + VH + T F + N+LI++Y K AR++FD++ +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 192 ----------------------RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
R+ ++ MI+G++ N G + LF +M+ G PD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 230 ETFLVVFAACA 240
TF V A A
Sbjct: 149 FTFASVLAGLA 159
>gi|297834310|ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330877|gb|EFH61296.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 218/372 (58%), Gaps = 19/372 (5%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q+ + +++L +C + ++ GK +H + S DV L N L++MYGKC +
Sbjct: 322 QEEMIGFSWATLTTILPACSRVAALITGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGDV 381
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+R+VFD + ++L++W+ +++ YA NG + + LFE M ++G PD TF+ + + C
Sbjct: 382 EYSRRVFDGMLTKDLTTWNTILNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 441
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + G FE MK ++ + P +EHY ++ +LG AG + EA + +E MPF+P+ +
Sbjct: 442 SDTGLTEYGISLFERMKTEFRVSPALEHYACLVDILGRAGKIEEAVKVIETMPFKPSASI 501
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAI----VDKI--PLPPR--KKQSATNMLE 351
W +L N ++HG+V + + L ++A VDKI + R KK++ + ++
Sbjct: 502 WGSLLNSCRLHGNVSVGEIGTMLWLRTYIAEAKMWDNVDKIREMMKQRGIKKEAGCSWVQ 561
Query: 352 EKNRVS--------DYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
K+++ ++R++D Y+ + + L + ++GY PDT VLHD+DEE K
Sbjct: 562 VKDKIQIFVAGGGYEFRNSDEYKKVWTE---LQEAIEKSGYSPDTSVVLHDVDEETKANW 618
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSERLA Y LI T +P+R+ KNLR+C DCH+ +KI+S++ GR +++RD KRFHH
Sbjct: 619 VCGHSERLAATYSLIHTGEGVPVRVTKNLRVCADCHSWMKIVSQVTGRVIVLRDTKRFHH 678
Query: 464 FRDGKCSCGDYW 475
F G CSC DYW
Sbjct: 679 FVAGICSCKDYW 690
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 103 LSLCKEGKVREAIEYMGQDASASAGY---DVFSSLLDSCGNLKSIEMGKRVHEL-LRTSA 158
L LCK K+ EA+ + + +++ + + ++ LL +C + KS+ G ++ L L +
Sbjct: 96 LGLCKSTKLDEAVTLIEKSSTSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLVLNNPS 155
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS---WHLMISGYAANGQGADGLM 215
D +L +KLI ++ C LARK+FD + +L + W M GY+ NG D L+
Sbjct: 156 LRHDPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 215
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKV 274
++ M + P + V AC + ++ G ++ +I+K + + Y ++K+
Sbjct: 216 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHGQIVKRKEKVDQVV--YNVLLKL 273
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G +A + + M E + W +L
Sbjct: 274 YMERGSFDDARKVFDGMS-ERNIVTWNSL 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S L +C +LK + +G+ +H + D + N L+++Y + + ARKVFD +
Sbjct: 232 ISVALKACVDLKDLRVGRGIHGQIVKRKEKVDQVVYNVLLKLYMERGSFDDARKVFDGMS 291
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+RN+ +W+ +IS + + + LF +M++ T + AC+ A+ G
Sbjct: 292 ERNIVTWNSLISILSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALITGKE 351
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +I+K+ P + +++ + G G + + + M + W + N I
Sbjct: 352 IHAQILKSKEK--PDVPLLNSLMDMYGKCGDVEYSRRVFDGM-LTKDLTTWNTILNCYAI 408
Query: 310 HGDVE 314
+G++E
Sbjct: 409 NGNIE 413
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 207/373 (55%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
F S+L +C NL ++++GK VH + + V L LI+MY KC + +A+++FD
Sbjct: 364 TFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFD 423
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ ++L++W+ MISG+A +G L LF +M G PD TF+ V AC A +
Sbjct: 424 CMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSL 483
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G YF M DY + P + HY +I + G AG EAE V+ M +P +W +L
Sbjct: 484 GRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGAC 543
Query: 308 QIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSA 346
+IH +EL + + L +L+P I ++ KK
Sbjct: 544 RIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPG 603
Query: 347 TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E + V ++ D + Y+ + ++ ++ +AG+VPDT VL+D+DEE KE
Sbjct: 604 CSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEG 663
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSE+LAIA+GLIST P +RI+KNLR+CG+CH+A K++SKI RE+I RD RFH
Sbjct: 664 VLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFH 723
Query: 463 HFRDGKCSCGDYW 475
HF+DG CSC DYW
Sbjct: 724 HFKDGSCSCKDYW 736
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNL-KSIEMGKRVHELLRTSAFVKDV 163
+ G+V EA+ + + A + S+L +C S+++G V + ++
Sbjct: 237 QSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNI 296
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L N LI+MY KC + A +F++++ +N+ SW++MI GY + L LF +M ++
Sbjct: 297 RLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQS 356
Query: 224 GPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P+ TFL + ACA+ A+ G +++ + KN + + + ++I + G L
Sbjct: 357 NIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLA 416
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A+ + M + ++ W A+ + +HG +
Sbjct: 417 VAKRIFDCMNTK-SLATWNAMISGFAMHGHTD 447
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 32/205 (15%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY---GKCCNTRL----- 181
F S+ SC ++ GK+VH + + ++ LI MY G+ N RL
Sbjct: 130 TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKS 189
Query: 182 -----------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
AR++FD++ R++ SW+ MISGYA +G+ + + FE
Sbjct: 190 SMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFE 249
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+MR+ P+ T L V +ACA + + + + D G+ I +I +
Sbjct: 250 EMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC 309
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G L EA E++ + V W +
Sbjct: 310 GDLEEASNLFEKIQ-DKNVVSWNVM 333
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 217/375 (57%), Gaps = 26/375 (6%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +SS+ + + ++E G+ VH + S + N ++ MY K + ARKV
Sbjct: 262 ATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKV 321
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD++ +R+L +W+ M++ +A G G + + FE++RK G ++ TFL V AC+ V
Sbjct: 322 FDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLV 381
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
KEG YF++MK DY + P I+HY++ + +LG AG L EA FV +MP EPT VW AL
Sbjct: 382 KEGKQYFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLG 440
Query: 306 FAQIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQ 344
++H + ++ A + + +LDP + + + KK+
Sbjct: 441 ACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKE 500
Query: 345 SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
A + +E +N V + + D + Y + +N ++++AGYVP+T YVL I E+ +
Sbjct: 501 PACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQER 560
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E LQYHSE++A+A+ LI+ P +RI+KN+RICGDCH+A + +S++ RE++VRD R
Sbjct: 561 ETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNR 620
Query: 461 FHHFRDGKCSCGDYW 475
FHHF +G CSCGDYW
Sbjct: 621 FHHFSNGSCSCGDYW 635
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L + G +G+++H L +DV + + L++MY +C +A +VFD L
Sbjct: 165 TFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWL 224
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +I+G+A G G LM F +M++ G T+ VF+A A A+++G
Sbjct: 225 DSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGR 284
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + + + I+ + +G +++A + +R+ V L FAQ
Sbjct: 285 WVHAHMIKSGQKLTAFVAN--TILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQ 342
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V+ S++ +C K++ + +H L S D L N LI MY KC AR VFD +
Sbjct: 64 VYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGI 123
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R++ SW +I+GYA N A+ L L M + P TF A +
Sbjct: 124 PTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGA 175
>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 219/402 (54%), Gaps = 30/402 (7%)
Query: 102 LLSLCKE-GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
L+S C + G E+IE Q+ SSLL +CG L ++ GK +H L +
Sbjct: 99 LISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKS 158
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
F++D+ + LI+ Y K + A KVF K L+SW+ MI G+A NG G + + L +
Sbjct: 159 FIEDLYVATALIDTYSKSGDLESAHKVFWSAEK-TLASWNCMIMGFAINGCGREVIALLD 217
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M++ G PD TF + + C ++ V+EG+ F++M NDYGI P IEHY + +LG A
Sbjct: 218 GMQRAGILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRA 277
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL-EDRAEELLG------------- 324
G+L EA +F++ MP +P VW A+ +IHG++E E A+EL
Sbjct: 278 GYLDEAWDFIQTMPIKPDASVWGAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLML 337
Query: 325 ----------DLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE-YEKMK 373
D+D K ++D + PR+ S + + + S GE Y ++
Sbjct: 338 SLYAMSNRWEDVDRIKDLMDTRGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELY 397
Query: 374 GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLR 433
L ++++ GY+PD V +IDEE K K L H+E+LAI YGLI T P+R+IKN R
Sbjct: 398 QLVSELKKFGYLPDVNCVYQNIDEEEKVKMLLSHTEKLAITYGLIKTSSA-PIRVIKNTR 456
Query: 434 ICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IC DCH A K++S + RE+ +RD RFHHF+ GKCSC DYW
Sbjct: 457 ICSDCHTAAKLISLVRSREIFLRDGVRFHHFKAGKCSCNDYW 498
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
++ +FD ++ +N+ +W+ +ISGY+ G L +M++ G PD T+ + A +
Sbjct: 11 SQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLITWNSLVAGYSM 70
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA-EEFVE 289
KE +K G+ P + + A+I G+ E+ E FV+
Sbjct: 71 RGHTKEALALIHDIKIS-GLTPNVVSWTALISGCSQNGNYSESIEAFVQ 118
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 218/373 (58%), Gaps = 29/373 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS +L++C ++ ++E G +H S DV + + L++MY KC A KVF+ +
Sbjct: 683 FSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMS 742
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N SW+ MISGYA +G G L +FE+M++ G PD TF+ V +AC+ A V G
Sbjct: 743 QKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLD 802
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE+M+ D+GI+P IEHY +I +LG AG L++ +E++ RMP +P +W + +
Sbjct: 803 YFEMME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQS 861
Query: 311 GD---VELEDRAEELLGDLDPSKAI---------------------VDKIPLPPRKKQSA 346
D ++L A +L +L+P + + KK++
Sbjct: 862 KDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAG 921
Query: 347 TNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ + + V + RS + YEK+ L +++ AGYVP T + L+D++EE KE+
Sbjct: 922 QSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEE 981
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L YHSE+LA+A+ L + +P+RI+KNLR+CGDCH A + +S+IV R++I+RD+ RFH
Sbjct: 982 LLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFH 1041
Query: 463 HFRDGKCSCGDYW 475
HF DGKCSCGDYW
Sbjct: 1042 HFEDGKCSCGDYW 1054
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +LL + L +E+GK+VH ++ ++D ++N L+ Y K + ++F +
Sbjct: 581 FVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMS 640
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ SW+ MISGY NG + + M + D TF +V ACAS A++ G
Sbjct: 641 GRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGM 700
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 97 SLDVNLLSLCKEGKVREAIE-YMGQDASASAGYDVFSSLLDSCGNLK----SIEMGKRVH 151
+L+ ++ L K+ EA+ +MG S D F LL + + G+ VH
Sbjct: 338 TLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVH 397
Query: 152 -ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
+LRT + L+N L+ MY KC A +VF L R+ SW+ +IS NG
Sbjct: 398 GHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFC 457
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI 269
+M + MR+ P + ++CAS + G ++ + +K +G+
Sbjct: 458 EGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVK--WGLDLDTSVSN 515
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++K+ G G E+ E M E + W ++
Sbjct: 516 ALVKMYGDCGARSESWEIFNSMA-EHDIVSWNSI 548
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+R+H L D+ L+N L+ +Y K AR+VFD + +RN SW ++SGY +
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 208 GQGADGLMLFEQMRKTGPH---PDKETFLVVFAACASAEAVKEGF---LYFEIMKNDYGI 261
G + +F+ M G P TF V AC A F ++ + K Y
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 262 VPGIEHYIAIIKVLG--SAGHLIEAEEFVERMPFEPTVEVWEALRN-------------- 305
+ + A+I + G S G ++A++ + P + W AL +
Sbjct: 196 NTTVCN--ALISMYGNCSVGLPLQAQQVFDTTPVRDLI-TWNALMSVYAKKGYVVSTFTL 252
Query: 306 -FAQIHGDVELEDRAEE 321
A +H D +E R E
Sbjct: 253 FMAMLHDDSAIELRPNE 269
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L SC +L+ + G++VH D ++N L++MYG C + ++F+ + + ++
Sbjct: 483 LSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDI 542
Query: 195 SSWH----LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
SW+ +M+S +A + + +F M ++G P+K TF+ + +A + ++ G
Sbjct: 543 VSWNSIMGVMVSSHAPTAESVE---VFSNMMRSGLTPNKVTFVNLLSALSPLSVLELG 597
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 201/367 (54%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L C L GK +H + S F +V + N LIEMY KC + KVF +++++
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W +IS + G+G L F+ M +G PD F+ AC+ + VKEG +F+
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK DY + P +EHY ++ +L +G L +AEEF+ MP +P +W AL + + G+
Sbjct: 649 RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNT 708
Query: 314 ELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
+ R + LG D K + + + KK+ ++ +E
Sbjct: 709 NIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEI 768
Query: 353 KNRVSDYRSTDLYRGEYEKMKGLNGQ----MREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+ RV +R+ D +Y+K+K L M + GYV D ++ LHD++E+ K L HS
Sbjct: 769 QKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHS 828
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
ERLAIA+GL++T P PL ++KNLR+CGDCH K ++KI+ RE++VRD RFH F+DG
Sbjct: 829 ERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGA 888
Query: 469 CSCGDYW 475
CSCGD+W
Sbjct: 889 CSCGDHW 895
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+++SC + +E+G VHE F D+ + N LI+MY + + AR VF+++
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ SW+ +ISGY +NG D L ++ + R TG PD T V AC S AVKEG
Sbjct: 184 NRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S + +CG +++GK VH+ L S F D N LI+MY KC + A++VFD +
Sbjct: 326 TSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKC 385
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ +W+ +I+GY +G +GL F+ M K PD TF+++ + + + +G
Sbjct: 386 KDSVTWNSLINGYTQSGYYKEGLESFKMM-KMERKPDSVTFVLLLSIFSQLADINQG 441
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C G +A++ + D F SS+L +CG+L +++ G VH ++ DV
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ N L+ MY K R AR+VF ++ ++ +W+ MI GYA G+ + LF M
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID- 316
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA----IIKVLGSAG 279
G PD + AC + ++ G + Y I G E +I + G
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFV-----HKYLIGSGFECDTVACNILIDMYAKCG 371
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRN 305
L+ A+E + + +V W +L N
Sbjct: 372 DLLAAQEVFDTTKCKDSV-TWNSLIN 396
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 18/240 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F LL L I G+ +H + F ++ + N L+++Y KC KVF +
Sbjct: 425 FVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW+ +I+ G + +MR G PD+ T L + C+ ++G
Sbjct: 485 AHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG-- 542
Query: 251 YFEIMKNDYGIV--PGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
K +G + G E + A+I++ G L + + M E V W AL
Sbjct: 543 -----KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALI 596
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRK-KQSATNMLEEKNRVSDYRSTD 363
+ ++G+ + +A + D++ S + D + S + M++E R D TD
Sbjct: 597 SAFGMYGEGK---KALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTD 653
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR- 190
SSLL + + K+ + VH L+ TS V + KLI Y + + + VF +
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
N+ W+ +I NG L + +MR+ PD TF V +CA
Sbjct: 83 TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCA 132
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 201/355 (56%), Gaps = 26/355 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYA 205
G+++H S V ++N LI MY K + AR VF+ + KR+ +W MI A
Sbjct: 431 GRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA 490
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
+G G + L LFE+M + G PD T++ V +AC V++G Y+ +M+N + I+P
Sbjct: 491 QHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTP 550
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
HY +I + G AG L EA F+E MP EP V W +L ++H +VEL + A E L
Sbjct: 551 SHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLL 610
Query: 326 LDPSKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDL 364
++P + I + KK + ++ KN+V + D
Sbjct: 611 IEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDG 670
Query: 365 YRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIST 420
+ YE M + ++++ G+VPDT VLHD++EE KE+ L +HSE+LAIA+GLI T
Sbjct: 671 LHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICT 730
Query: 421 PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P LRI+KNLR+C DCH+AIK +SK+VGRE+IVRD RFHHF++G CSC DYW
Sbjct: 731 PENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 36/162 (22%)
Query: 107 KEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G REA++ M D+S+ +S L +C NL+++++GK++H + + F
Sbjct: 254 QHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFG 313
Query: 164 ELNNKLIEMYGKCCNTRLA---------------------------------RKVFDQLR 190
+ N LI MY K +A R++FD LR
Sbjct: 314 AVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLR 373
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
R++ +W MI GY NG D + LF M K GP P+ T
Sbjct: 374 VRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTL 415
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 47/239 (19%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD--- 187
+++L SC ++ + +G++VH + + + N L+ MY K + A+ VFD
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207
Query: 188 ----------------------------QLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
Q+ +R++ SW+ MISGY +G + L +F +
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSK 267
Query: 220 M-RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
M + PDK T +ACA+ E +K G ++ I++ ++ + + A+I +
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN--ALISMYSK 325
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
+G + A++ +E + + + + A + G V+ LGD++P++ I D +
Sbjct: 326 SGGVEIAQKIIE----QSMISNLDVIAFTALLDGYVK--------LGDINPARRIFDSL 372
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
D ++S L K GK +H + + V L N L+ Y K A +VFD+
Sbjct: 14 DPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDE 73
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ +++ SW++++SGYA G+ + +FE+M P PD ++
Sbjct: 74 MPVKSVFSWNIILSGYAKGGRLEEAHRVFEEM----PEPDSVSW 113
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VK V N ++ Y K A +VF+++ + + SW MI GY GQ + + +F +
Sbjct: 76 VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFRE 135
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI----IKVL 275
M P + T V A+CA+ E + G + + + G+ YI++ + +
Sbjct: 136 MVSDDVPPTQFTLTNVLASCAAVECLGIGRKV-----HSFVVKHGLSSYISVANSLLNMY 190
Query: 276 GSAGHLIEAEEFVERMPFEPT 296
+G + A+ +RM + T
Sbjct: 191 AKSGDPVTAKIVFDRMKLKST 211
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 211/368 (57%), Gaps = 27/368 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRN 193
L +C + +IE GK +H + S F+ V +NN L++ Y KC N +AR VF+++ KR+
Sbjct: 276 LSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRS 335
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW MI+G A +G G + + LF +M ++G PD F+ + AC+ A +++G+ YF
Sbjct: 336 IVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFY 395
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK+ Y I P IEHY ++ + G AG L +A EF+ MP PT +W L IHG+V
Sbjct: 396 KMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNV 455
Query: 314 ELEDRAEELLGDLDPSK-----------AIVDKIPLPPRKKQSATN----------MLEE 352
+L +R +E L +LDP+ A+ K ++S T+ M+E
Sbjct: 456 KLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEV 515
Query: 353 KNRVSDYRSTDLYRG----EYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKALQYH 407
+ + + ++ YEK+K + ++R E Y+P+ VLHDI++E KE ++ H
Sbjct: 516 DKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRH 575
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+G+ +RI+KNLR+C DCH +K++SK+ G E++VRD RFH F+ G
Sbjct: 576 SEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTG 635
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 636 SCSCRDYW 643
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG++K +M + F +++ N ++ Y K LARK+F ++ ++ SW
Sbjct: 185 CGDVKGADM------MFNRMPF-RNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSW 237
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMK 256
MI G+A NG + F ++++ G P++ + +ACA A A++ G L+ I K
Sbjct: 238 STMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEK 297
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE 316
+ + + + + A++ G++ A ERMP + ++ W ++ +HG E
Sbjct: 298 SGFLWMVSVNN--ALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGE-- 353
Query: 317 DRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE 368
A +L +++ S D I + L EK Y+ D+Y E
Sbjct: 354 -EAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIE 404
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 206/373 (55%), Gaps = 28/373 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF--DQ 188
+S L +C NL +++ G+ +H + S + L L++MY KC A KVF +
Sbjct: 167 LASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEY 226
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K + W+ MI GYA +G+ + + LFEQM+ P+K TF+ + AC+ + V+EG
Sbjct: 227 GLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEG 286
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF+ M + YGI P IEHY ++ +LG +G L EAEE V MP P +W AL +
Sbjct: 287 RGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACR 346
Query: 309 IHGDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSAT 347
IH D+E R +++ G D +KA+ KI + RKK
Sbjct: 347 IHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGC 406
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAKEK 402
+ +E + RS + Y + + +++ AGYVP+ VL DID EE KE
Sbjct: 407 SSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKET 466
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
AL HSE+LAIA+GLI+TPP +RI+KNLR+C DCH A K +SK+ RE+IVRD R+H
Sbjct: 467 ALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYH 526
Query: 463 HFRDGKCSCGDYW 475
HF+DG CSC DYW
Sbjct: 527 HFKDGFCSCKDYW 539
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 131 FSSLLDSCGNLKSIEMGK--RVHEL---LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F + +CGN + G+ RVH + L ++ FV N +I MY AR+V
Sbjct: 35 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFV-----TNAMIRMYANWGLVDEARRV 89
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGA-------------------------------DGL 214
FD ++L SW++MI GY +G+ + L
Sbjct: 90 FDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEAL 149
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
LF +M +TGP P++ T AACA+ A+ +G
Sbjct: 150 DLFHEMLQTGPPPNEFTLASALAACANLVALDQG 183
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 202/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C L + GK +H + DV + N LIEMY KC + R + +VF ++ +
Sbjct: 359 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 418
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W +IS G+G + F +M G PD F+ + AC+ + V+EG YF
Sbjct: 419 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 478
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK DY I P IEHY ++ +L + L +AE+F+ MP +P +W AL + ++ GD
Sbjct: 479 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGD 538
Query: 313 VELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
E+ +R E LG D ++I I KK + +E
Sbjct: 539 TEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWME 598
Query: 352 EKNRVSDYRSTDLYRGEYE---KMKG-LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+N+V + + + ++E K+ G L G M + GY+ + ++VLHDIDE+ K L H
Sbjct: 599 IQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGH 658
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GL++T P PL+++KNLR+C DCH K +SKIV REL+VRD RFH F+DG
Sbjct: 659 SERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDG 718
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 719 ACSCGDYW 726
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 33/259 (12%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +CG+L +E GK VH+ + TS + D +N LI MY KC N +++VF ++
Sbjct: 226 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 285
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ SW+ MI+ Y NG+ D L +FE M+ D T+ + A+C +E G
Sbjct: 286 KDSVSWNSMINVYIQNGKMGDSLKVFENMKAR----DIITWNTIIASCVHSEDCNLGLRM 341
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF---VERMPFEPTVEVWEALRNFAQ 308
M+ + G+ P + ++I+ V + +E + ++ E V V L
Sbjct: 342 ISRMRTE-GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL----- 395
Query: 309 IHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE 368
+E+ + L K + K + SA M GE
Sbjct: 396 ----IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY----------------GE 435
Query: 369 YEKMKGLNGQMREAGYVPD 387
+K G+M AG VPD
Sbjct: 436 GKKAVRAFGEMEAAGIVPD 454
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S++++C L EM K +H+ + F D+ + N LI+MY + + ARKVF+++
Sbjct: 118 FPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH------PDKETFLVVFAACASAEA 244
R++ SW+ +ISGY ANG + L ++ Q K PD T + AC
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHL-- 235
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIA----IIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
G L F +DY I G E +I + G+L+ ++E M + +V W
Sbjct: 236 ---GDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS-W 291
Query: 301 EALRN 305
++ N
Sbjct: 292 NSMIN 296
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+FSS+ + + + ++H L+ T V + KLI Y + + VF
Sbjct: 15 LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 190 R-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+ +I NG ++ L L+ + ++ PD TF V ACA G
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------G 127
Query: 249 FLYFEIMKN------DYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
L FE+ K+ D G G + YI A+I + L +A + E MP V W
Sbjct: 128 LLDFEMAKSIHDRVLDMGF--GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-W 184
Query: 301 EAL 303
+L
Sbjct: 185 NSL 187
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 222/406 (54%), Gaps = 27/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S +V + + + G+ EA + Q + D +F S+L++C + ++E K++H
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S DV + L+ MY K + AR VFD+++ RN+ SW+ MISG A +G G D L
Sbjct: 358 LDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDAL 417
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
+F +M G PD+ TF+ V +AC+ A V EG + M YGI P + H ++ +
Sbjct: 418 EVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDL 477
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--- 331
LG AG L+EA+ F++ M +P W AL + +G+VEL + + LDP A
Sbjct: 478 LGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATY 537
Query: 332 --------------IVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMK 373
+V + R +K+ + +E N++ D+ D E +++
Sbjct: 538 VLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEIN 597
Query: 374 ----GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
+ +++ GY+PDTR VL + + + KE + HSE+LAI YGL+ TPP P+R+
Sbjct: 598 ESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVF 657
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+C DCH A K++SK+ GRE+IVRD RFHHF+DG CSCGDYW
Sbjct: 658 KNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C +L +++ GK VH +R DV + L+ MYGKC + AR++FD L
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW +MI YA +G G + L QM + G P+ T++ + ACAS EG L
Sbjct: 192 NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACAS-----EGAL 246
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ + + + G+E + A++++ +G + +A +RM V W +
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS-WNVMIGA 305
Query: 307 AQIHG 311
HG
Sbjct: 306 FAEHG 310
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L++C + +++ KRVH + DV + L++MY K + AR VFD+++
Sbjct: 233 YVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK 292
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW++MI +A +G+G + LF QM+ G PD FL + ACASA A+ E
Sbjct: 293 VRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGAL-EWVK 351
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
D G+ + A++ + +G + +A +RM V W A+ + H
Sbjct: 352 KIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVS-WNAMISGLAQH 410
Query: 311 G 311
G
Sbjct: 411 G 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ +L C K + K+VH+ + S ++ + N L+ +Y +C + AR VFD L
Sbjct: 30 MYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL 89
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K++ +SW+ MI+GY + D + LF +M G P+ T++++ ACAS A+K G
Sbjct: 90 VKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGK 149
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+++ G+ + A++++ G G + EA + +
Sbjct: 150 EVHACIRHG-GLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 213/369 (57%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++LD+C +L +++ G+++H + + F ++ + LI MYGKC AR VF+++ KR
Sbjct: 414 AVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKR 473
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ M+ YA +G + L LF QM+ G D +F+ V +A + + +V +G+ YF
Sbjct: 474 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYF 533
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP-FEPTVEVWEALRNFAQIHG 311
M D+ I P E Y ++ +LG AG + EA + V ++ P +W L + H
Sbjct: 534 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 593
Query: 312 DVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATNML 350
+ A E + + DPS + V+++ R KK+ + +
Sbjct: 594 KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 653
Query: 351 EEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E NRV ++ RS Y ++ LN +MR AGY+PDT+ +LHD+++E KE L Y
Sbjct: 654 EILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFY 713
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAIA+GL+STPP PLR+IKNLR+C DCH A K +SK+ GRE++VRD RFH+F+D
Sbjct: 714 HSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKD 773
Query: 467 GKCSCGDYW 475
G+CSC DYW
Sbjct: 774 GRCSCKDYW 782
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 113 EAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EA+ G Q A F +L+ +L S+ GK +HEL++ + + +DV + L+
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+YG+C A K+F + +++ +W +M YA NG + L LF++M+ G P
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 231 TFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
T + V CA A+++G ++ I++N + + +E A+I + G G + EA E
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFE 468
Query: 290 RMPFEPTVEVWEALRNFAQIHG 311
+M + + VW ++ HG
Sbjct: 469 KMA-KRDILVWNSMLGAYAQHG 489
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +LL C + K+++ G+RVH + F ++ + LI+MY +C + A++VF+ L
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
++++ +W MI Y G L +F QM++ P K T++ + ACAS E++K+G
Sbjct: 68 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +I++ G + A+I + G + A + +R+ V W A+
Sbjct: 128 IHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAM 178
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 106 CKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C++G A+ Y Q+ + ++L++C + +S++ G +H + F DV
Sbjct: 82 CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 141
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ LI MY KC + R A F +L R++ SW MI+ + Q A L+ +M+
Sbjct: 142 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 201
Query: 224 GPHPDKETFLVVFAACASAEAVKEG-FLY----FEIMKNDYGIVPGIEHYIAIIKVLGSA 278
G P+K T VF A + EG F+Y +M++D ++ + + + G+A
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMN------SAMNMFGNA 255
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNF 306
G L +A E M + V W + F
Sbjct: 256 GLLGDARRLFEDM-VDRDVVTWNIVITF 282
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 66/124 (53%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ ++ G+ + GK ++ L+ + DV + N + M+G AR++F+ + R
Sbjct: 212 TVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDR 271
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+++I+ Y N + + LF ++++ G + TF+++ S ++ +G +
Sbjct: 272 DVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIH 331
Query: 253 EIMK 256
E++K
Sbjct: 332 ELVK 335
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 210/372 (56%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ + +L I +G+++H L S + V + L++MY KC A + FD++
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW+ +IS YA G+ + + +FE M G +PD TFL V AAC+ E
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK+ Y I P EHY +I LG G + ++ + MPF+ +W ++ + +I
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR--KKQSAT 347
HG+ EL A + L ++P+ A V KI + R +K+S
Sbjct: 620 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI-MRDRGVRKESGY 678
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K ++ + S DL +++K L +M + GY PD LH +D E K ++
Sbjct: 679 SWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLES 738
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSERLAIA+ L++TP P+RI+KNL C DCH IK++SKIV R++IVRD++RFHH
Sbjct: 739 LKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHH 798
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 799 FKDGVCSCGDYW 810
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++++L G+L + +GK++H L + L N LI+MY KC A+ F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+++ SW +I+GY NGQ + L LF MR+ G PD+ TF + A +S + G
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 250 LYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ ++++ Y + G ++ + G L EA + MP ++ W A+
Sbjct: 460 LHSYLIRSGYKSSVFSG----SVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAV 510
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
++ KEG +A++ + A A + FSS+L + + +G +VH L+ S
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTS 267
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V +V +NN L++ Y KC R++FD++ +R+ S++++I+ YA N A L LF +
Sbjct: 268 VLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFRE 327
Query: 220 MRKTG 224
M+K G
Sbjct: 328 MQKLG 332
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K++ N ++ Y + A+ +F RN ++W +M+ +AA G+ +D L LF M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 221 RKTGPHPDKETFLVVF 236
G PD+ T V
Sbjct: 132 LGEGVIPDRVTVTTVL 147
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FDQ+ +N+ S +L++S Y+++G LF + PH + T+ ++ A A+
Sbjct: 62 ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMMRAHAA 117
Query: 242 AEAVKEGFLYFEIMKNDYGIVP 263
A + F M + G++P
Sbjct: 118 AGRTSDALSLFRAMLGE-GVIP 138
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 210/372 (56%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKCCNTRLARKVFDQ 188
++ + LD+C +L ++ G+++H + + +DV L N ++ MYG+C + R AR FD
Sbjct: 434 LYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDG 493
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R+ SW+ M+S A +G+ D LF M + G ++ FL + +ACA A V+ G
Sbjct: 494 MPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAG 553
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+F M D+G+VP EHY ++ +LG G L +A V+ MP P W AL +
Sbjct: 554 CEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACR 613
Query: 309 IHGDVE---------LEDRAEELL------------GDLDPSKAIVDKIPLPPRKKQSAT 347
I+GD E LE RA G + + A+ + +K
Sbjct: 614 IYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGV 673
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E +++V ++ RS Y +++ + G + AGY T VLHD++EE KE+
Sbjct: 674 SSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQL 733
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L++HSE+LAIA+G++STP LR+IKNLR+C DCHNA K +SK+ GRE++VRD +RFHH
Sbjct: 734 LRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHH 793
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 794 FKDGACSCGDYW 805
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF S+L +C + + + G+ +H + + + L+ MYG+C + R A +F L
Sbjct: 130 VFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL 189
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R ++ W+ MI+ + NG + L +F +M + G PD TF+ VF AC+S+ +++
Sbjct: 190 ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRAS 249
Query: 249 FLY-FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
+ F ++ G+ + A++ G + A EF MP V + FA
Sbjct: 250 QVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFA 309
Query: 308 QIHGDVELEDRAEELLGDLDPSKAIV 333
QI + +E LL + P+++ +
Sbjct: 310 QIGHLLAVETFHAMLLEGVVPTRSTL 335
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 143 SIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
SI GK +H + +S + +D L + L+ MY +C + A VF ++ +++ W ++I
Sbjct: 41 SIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLI 100
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
S Y + G A + LF ++ + G D F+ V +AC+S E + G L I +
Sbjct: 101 SAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRL---IHRCAVEA 157
Query: 262 VPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G++ + A++ + G G L +A + V +W A+
Sbjct: 158 GLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 9/188 (4%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+L + + + + V + + DV + L+ Y +C A +VF
Sbjct: 333 STLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFS---A 389
Query: 192 RNLSSWHL-----MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
R W MI+ YA L+ + G PD+ ++ ACAS A+
Sbjct: 390 REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALS 449
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
EG + D + + AI+ + G G L +A + + MP + W A+ +
Sbjct: 450 EGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSA 508
Query: 307 AQIHGDVE 314
+ HG VE
Sbjct: 509 SAQHGRVE 516
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 210/372 (56%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ + +L I +G+++H L S + V + L++MY KC A + FD++
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW+ +IS YA G+ + + +FE M G +PD TFL V AAC+ E
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK+ Y I P EHY +I LG G + ++ + MPF+ +W ++ + +I
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR--KKQSAT 347
HG+ EL A + L ++P+ A V KI + R +K+S
Sbjct: 620 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI-MRDRGVRKESGY 678
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K ++ + S DL +++K L +M + GY PD LH +D E K ++
Sbjct: 679 SWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLES 738
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSERLAIA+ L++TP P+RI+KNL C DCH IK++SKIV R++IVRD++RFHH
Sbjct: 739 LKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHH 798
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 799 FKDGVCSCGDYW 810
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++++L G+L + +GK++H L + L N LI+MY KC A+ F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+++ SW +I+GY NGQ + L LF MR+ G PD+ TF + A +S + G
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 250 LYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ ++++ Y + G ++ + G L EA + MP ++ W A+
Sbjct: 460 LHSYLIRSGYKSSVFSG----SVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAV 510
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
++ KEG +A++ + A A + FSS+L + + +G +VH L+ S
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTS 267
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V +V +NN L++ Y KC R++FD++ +R+ S++++I+ YA N A L LF +
Sbjct: 268 VLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFRE 327
Query: 220 MRKTG 224
M+K G
Sbjct: 328 MQKLG 332
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K++ N ++ Y + A+ +F RN ++W +M+ +AA G+ +D L LF M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 221 RKTGPHPDKETFLVVF 236
G PD+ T V
Sbjct: 132 LGEGVIPDRVTVTTVL 147
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FDQ+ +N+ S +L++S Y+++G LF + PH + T+ ++ A A+
Sbjct: 62 ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMMRAHAA 117
Query: 242 AEAVKEGFLYFEIMKNDYGIVP 263
A + F M + G++P
Sbjct: 118 AGRTSDALSLFRAMLGE-GVIP 138
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 210/372 (56%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRT--SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F S+LD+C + +++ G+R+HE + DV + L+ MY KC N LA +FD+
Sbjct: 266 FVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDK 325
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +L W+ +I+ A +GQ L LFE+MR G P TF V AC+ A + +G
Sbjct: 326 IAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 385
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+F D+GI P EH+ ++ +LG AG ++++E+ + MPFEP W A +
Sbjct: 386 RKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACR 445
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
+ +++ A E L LDP K + + L K++
Sbjct: 446 TYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGR 505
Query: 348 NMLEEKNRVSDYRSTDLYR---GE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K+RV ++ S DL GE + +++ L M+EAGYVPDT VLHD+ +E KE
Sbjct: 506 SWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIM 565
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ YHSE+LA+A+ L++TP P+R++KNLR+C DCH A K +SK+V RE++VRD RFH
Sbjct: 566 VGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHR 625
Query: 464 FRDGKCSCGDYW 475
F++G CSCGDYW
Sbjct: 626 FQNGACSCGDYW 637
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S L +C + + I +G+ + + + ++ + L+ MYGK + A VF ++
Sbjct: 64 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMS 123
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W M++ YA NG + L LF QM G P+K T + ACAS ++ G L
Sbjct: 124 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 183
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ ++ GI G+ A++ + G G + A E ++ E V W A+
Sbjct: 184 MHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI-VEKNVVAWSAI 234
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 107 KEGKVREAIEYMGQ-DASASAGYDV-FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G REA+ Q D A V S LD+C +L + G +H+ + V
Sbjct: 139 RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 198
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ +YGKC A + F Q+ ++N+ +W + + YA N + D + + +M G
Sbjct: 199 VGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 258
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKN-DYGIVPGIEHYIAIIKVLGSAGHLIE 283
P+ TF+ V ACA+ A+K+G E + G+ + A++ + G+L
Sbjct: 259 LVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLAL 318
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A + +++ V +W +L HG E
Sbjct: 319 AGDMFDKIAHLDLV-LWNSLIATNAQHGQTE 348
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 12/140 (8%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
++ Y + N RK FD++ ++ SW+ +I+ Y N + F M G +P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 229 KETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEH----YIAIIKVLGSAGHLIE 283
+ + +AC A + G + I+ GIE A++ + G GH +
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGT------GIEEESIVQTALVSMYGKLGHCTD 114
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A RM V W A+
Sbjct: 115 AASVFLRMSHRDVV-AWSAM 133
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 221/406 (54%), Gaps = 33/406 (8%)
Query: 102 LLSLC-KEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRT 156
L+S C + + ++A+ E G+D+ A LL +C +L +++ G++V
Sbjct: 191 LISCCARNRRTKDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEE 250
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
+ +++ N LI MY +C A +VF ++++ +W MISG AANG G D +
Sbjct: 251 HGYGAKLKVRNSLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISA 310
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
FE+M ++ PD++TF V +AC+ + V EGF +F++M+ +YG+ P + HY I+ ++G
Sbjct: 311 FEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMG 370
Query: 277 SAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK 335
AG L EA E V M P +W L +IHG V+L +R L +L +A D
Sbjct: 371 RAGLLDEAYELVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQA-GDY 429
Query: 336 IPL--------PPRKKQSATNMLEEKN-RVSDYRSTDLYRGE-----------------Y 369
+ L K +++EK + + +T + GE Y
Sbjct: 430 VLLLNTYAAVGEWSKVSEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIY 489
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
EK+ +N Q+R AGYVP+ LHD+D E KE AL YHSE+LAIA+ L+ TP P+R+
Sbjct: 490 EKLNEINKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLA 549
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+C DCHN K+ S I R +IVRD RFHHF+ GKCSC DYW
Sbjct: 550 KNLRVCVDCHNFTKVFSGIYNRLVIVRDRTRFHHFQGGKCSCNDYW 595
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 25/252 (9%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
++ +++H + ++D L L+ Y + ARK+F ++ R+ +W+++IS
Sbjct: 134 ALAHARQLHANVVAEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLIS 193
Query: 203 GYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKEG---FLYFEIMKN 257
A N + D L LFE+M R +G PD T +++ AC S A+ G + Y E ++
Sbjct: 194 CCARNRRTKDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAE--EH 251
Query: 258 DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN--FAQIHGDVEL 315
YG + + ++I + G + +A P + +V W A+ + A GD +
Sbjct: 252 GYGAKLKVRN--SLIAMYSRCGCVDKAYRVFCGTP-QKSVVTWSAMISGLAANGFGDDAI 308
Query: 316 EDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGL 375
E + D+ P + + S + +++E +R D+ R EY GL
Sbjct: 309 SAFEEMIRSDVAPDEQTFTGV----LSACSHSGLVDE-----GFRFFDMMRCEY----GL 355
Query: 376 NGQMREAGYVPD 387
+R G + D
Sbjct: 356 KPNVRHYGCIVD 367
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ +L +C S ++GK+VH + S + L+ MY K + A +VF +
Sbjct: 265 TYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGM 324
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K +L SW MISGYA NGQ + L F+ + ++G PD TF+ V +ACA A V +G
Sbjct: 325 PKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGL 384
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F +K++YGI +HY +I +L +G AEE + M +P +W +L +I
Sbjct: 385 SIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRI 444
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATN 348
H +V L A E L +++P S + D++ R K A++
Sbjct: 445 HKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASS 504
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E R+ + D + E+ +K L +MRE GYV DT +VLHD+++E K++ +
Sbjct: 505 WIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDI 564
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSERLA+A+G+I+TP P+++ KNLRICGDCH IK++SKIV RE+IVRD+ RFHHF
Sbjct: 565 GYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHF 624
Query: 465 RDGKCSCGDYW 475
++G CSC DYW
Sbjct: 625 KNGSCSCRDYW 635
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ +H + D + + L +MY KC AR VFD++ R++ SW M+ Y
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFD 240
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +G LF +M ++G P++ T+ V ACA + K G
Sbjct: 241 ARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLG 282
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 217/408 (53%), Gaps = 27/408 (6%)
Query: 95 LESLDVNLLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
L + V + K +AIE ++ Q A V S++ SC +L ++E+G+R H+
Sbjct: 210 LVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHD 269
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+ + ++ L L++MY +C + A VFDQL R+ SW +I+G+A +G
Sbjct: 270 YILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEK 329
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L F +M K G P + TF V +AC+ V+ G FE MK DY I P +EHY ++
Sbjct: 330 ALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMV 389
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA- 331
+LG AG L EAE+FV MP +P +W AL +IH + E+ +RA + L +L P +
Sbjct: 390 DLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSG 449
Query: 332 ---IVDKIPLPPRKKQSATN-----------------MLEEKNRVSDYRSTDLYRGEYEK 371
++ I K ++ N + E +V + D E ++
Sbjct: 450 YYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQ 509
Query: 372 MKGLN----GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
++ + G++R AGY + L DIDEE KE + HSE+LAIAY ++ T P+R
Sbjct: 510 IERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIR 569
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I+KNLR+C DCH A K++SK+ RELIVRD RFHHF+ G CSC DYW
Sbjct: 570 IVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 31/146 (21%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG------------------- 174
L+ +C S++MG + H + F DV + N L+ MY
Sbjct: 119 LVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLD 178
Query: 175 ------------KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
K + ARK+FD++ ++NL +W +MISGYA N + L+ ++
Sbjct: 179 VVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQS 238
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
G H ++ + V A+CA A++ G
Sbjct: 239 EGVHANETVMVSVIASCAHLGALELG 264
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++S ++ +C +L + ++ H + + D L L+ MY + N AR+VFD++
Sbjct: 425 IYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM 484
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ +W +I+GYA +G+ L L+++M G P + TF+VV AC+ A ++G
Sbjct: 485 SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 544
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F +++DY + P I HY II +L AG L +AEE + MP EP W +L ++I
Sbjct: 545 QLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRI 604
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
H DV+ A + LDP ++ + + KK+ ++
Sbjct: 605 HKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSS 664
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +++ ++ D ++ + +++ L+ +++EAGYVP++ VLHD+ E+ KE L
Sbjct: 665 WIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLL 724
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+ HSE+LAIA+GLI+T P LRI LRIC DCH+A+K +S I RE+IVRD+ RFH F
Sbjct: 725 RLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKF 784
Query: 465 RDGKCSCGDYW 475
RDG+CSCGDYW
Sbjct: 785 RDGQCSCGDYW 795
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
+ S + + + + G EAI + +D F+S+L +C NL ++ G+++H L+
Sbjct: 188 VSSWNAMIAAYAQSGHFEEAIR-LYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALI 246
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ D+ L N L+ MY +C A K+F +L +R++ SW MI+ +A + +
Sbjct: 247 SSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAI 306
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIK 273
+ +M+ G P+ TF V ACAS ++ G ++ +I+ N Y I + + A++
Sbjct: 307 EFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT--LVNGTALVD 364
Query: 274 VLGSAGHLIEAEEFVERM 291
+ S G L EA +++
Sbjct: 365 LYTSYGSLDEARSLFDQI 382
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 94/175 (53%), Gaps = 6/175 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQ 188
V++++L +C ++K++E GK +H + + +K DV L N L+ MY KC + A+++F++
Sbjct: 123 VYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFER 182
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R++SSW+ MI+ YA +G + + L+E M P TF V +AC++ + +G
Sbjct: 183 MSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG 239
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + G + A++ + L +A + +R+P V W A+
Sbjct: 240 RKIHALISSR-GTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVS-WSAM 292
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L C +L+S+ +++H+ + + A +V L N+++ YGKC + AR FD + ++N
Sbjct: 34 LRQCQDLESV---RQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKND 89
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW M++ YA NG L L+++M P+ + V ACAS +A++EG
Sbjct: 90 YSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSR 146
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G+ + +++ + G L +A+ ERM +V W A+ G E
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR-SVSSWNAMIAAYAQSGHFE 205
Query: 315 LEDRAEELLGDLDPS 329
R E + D++PS
Sbjct: 206 EAIRLYEDM-DVEPS 219
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 113 EAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EAIE+ Q Y F+S+L +C ++ + G+ VH+ + + + + L+
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP-DK 229
++Y + AR +FDQ+ R+ W ++I GY+ G L L+ +M+ T P K
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 423
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
+ V +ACAS A + ++ D G++ +++ + G+L A + +
Sbjct: 424 IIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQVFD 482
Query: 290 RMPFEPTVEVWEALRNFAQIHGD 312
+M T+ W L HG+
Sbjct: 483 KMSSRDTL-AWTTLIAGYAKHGE 504
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 215/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L +C NL +++ G+ +H + ++ D L L++MY KC +A VF+++
Sbjct: 295 VLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKM 354
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+ + +W+ MI G +G+ D + LF +M+K P+ T L V +ACA + V EG
Sbjct: 355 EKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGL 414
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M+ YGI PG+EHY ++ +LG AG L EAEE + MP EP+ VW AL +
Sbjct: 415 RIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRK 474
Query: 310 HGDVELEDRAEELLGDLDPSK----AIVDKI---------------PLPPR--KKQSATN 348
HGDVEL +R ++L +L+P A++ I + R K + +
Sbjct: 475 HGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGIS 534
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
M++ V +++ D + Y +K + +++ G+ P+T VL DI+EE KE L
Sbjct: 535 MIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAEL 594
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
QYHSE+LAIA+GLI+T P + ++KNLR+C DCH+A K++S++ RE+IVRD R+HHF
Sbjct: 595 QYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHF 654
Query: 465 RDGKCSCGDYW 475
+ G CSC D+W
Sbjct: 655 KTGTCSCKDFW 665
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 28/289 (9%)
Query: 36 LKSSSPVKLLCAY-------ATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDP 88
L+++ P K +C Y A PN Y T F + ++ E + H+
Sbjct: 106 LQNNEPCKAICCYYKMMIAHARPNKFTYP-TLF----KACTAAEAAEEGVQVHAHVIKQG 160
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
L G+ + S + + G+V A +G+D ++ F++++D +E K
Sbjct: 161 LSGDVHIRSAGIQMYG--SFGEVEGARRMLGEDGNSDV--ICFNAMIDGYLKCGEVEAAK 216
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
L S K+V N ++ KC AR++F++++++N SW MI GY G
Sbjct: 217 E----LFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGG 272
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG---FLYFEIMKNDYGIVPGI 265
+ L +F M++ P K V AACA+ A+ +G Y N + V G
Sbjct: 273 YYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLG- 331
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A++ + G L A + E+M + V W A+ +HG E
Sbjct: 332 ---TALVDMYAKCGRLDMAWDVFEKME-KKEVFTWNAMICGLGMHGRAE 376
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 200/370 (54%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS +LD C NL ++ + +H + + +D+ + N L+ MYGKC AR+VF+++
Sbjct: 114 FSLVLDVCANLAALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMA 173
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW +I+ YA G + LF M++ G D F+ V + C A +K+
Sbjct: 174 SKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARN 233
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M DYG+ P E+Y I+ +LG G L + E+ +E M EP W + N ++H
Sbjct: 234 WFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVH 293
Query: 311 GDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNM 349
D++ RA + L G D + + +I KK +
Sbjct: 294 KDMKRGVRAAQRLVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSW 353
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K++V + S + +++ L MREAGYVPDT VL D++EE KE+ L
Sbjct: 354 IEIKDKVHKFASGSRTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLC 413
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+ A+A+GLISTP PLR++KNLR+C DCH A K +SKI GR++ VRD RFH F+
Sbjct: 414 YHSEKQAMAFGLISTPSGTPLRVVKNLRVCTDCHTATKFISKITGRQITVRDANRFHEFK 473
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 474 DGFCSCKDYW 483
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S++++C L + +G+ +H + T D L LI MY +C A +VFD +
Sbjct: 13 FTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDVPDKAIEVFDAMH 72
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ W MI+ ++ GQG + L LF++M G DK F +V CA+ A+ + +
Sbjct: 73 NKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQARI 132
Query: 251 YFEIMKNDYGIVPGIEHYI------AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ V G E ++ + G G L EA + E+M + V +
Sbjct: 133 L-------HATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSIIA 185
Query: 305 NFAQ 308
+AQ
Sbjct: 186 AYAQ 189
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 210/386 (54%), Gaps = 27/386 (6%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
+ M DA S+L++C + ++ GK +H + F V + N L+ MY +
Sbjct: 270 DMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMR 329
Query: 176 CCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
C + R +F + +R++ SW+ +ISGY +G G + + +FE+M G P TF+
Sbjct: 330 CGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFIS 389
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
V AC+ A V EG + FE M +YG+ P EHY ++ +LG AG L EA E + M E
Sbjct: 390 VLGACSHAGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIE 448
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------IVDKIPLPPR----- 341
P+ +VW AL +IHG VE + A L DL+P A I + L +
Sbjct: 449 PSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLK 508
Query: 342 --------KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTR 389
+K + + +E K ++ + S D E+++ L G QM+ GYVPDT
Sbjct: 509 ELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTG 568
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
VL+DI+ E KE+ L HSE+LA+A+GLI+T +RI KNLR+C DCH+ K +SK
Sbjct: 569 IVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFT 628
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
RE++VRD RFHHFRDG CSCGDYW
Sbjct: 629 EREIVVRDVNRFHHFRDGVCSCGDYW 654
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+ VH + + LI+ Y K R A VF + +RN+ SW MI YA N
Sbjct: 199 REVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKN 258
Query: 208 GQGADGLMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY 259
+ AD + LF+ M + P+ T + V ACA A+ G L+ I++ +
Sbjct: 259 ERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGF 313
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++S ++ +C +L + ++ H + + D L L+ MY + N AR+VFD++
Sbjct: 426 IYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM 485
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ +W +I+GYA +G+ L L+++M G P + TF+VV AC+ A ++G
Sbjct: 486 SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 545
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F +++DY + P I HY II +L AG L +AEE + MP EP W +L ++I
Sbjct: 546 QLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRI 605
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
H DV+ A + LDP ++ + + KK+ ++
Sbjct: 606 HKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSS 665
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +++ ++ D ++ + +++ L+ +++EAGYVP++ VLHD+ E+ KE L
Sbjct: 666 WIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLL 725
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+ HSE+LAIA+GLI+T P LRI LRIC DCH+A+K +S I RE+IVRD+ RFH F
Sbjct: 726 RLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKF 785
Query: 465 RDGKCSCGDYW 475
RDG+CSCGDYW
Sbjct: 786 RDGQCSCGDYW 796
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
+ G + S + + + + G EAI + +D F+S+L +C NL ++ G+
Sbjct: 183 MSGRRSVSSWNAMIAAYAQSGHFEEAIR-LYEDMDVEPSVRTFTSVLSACSNLGLLDQGR 241
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H L+ + D+ L N L+ MY +C A K+F +L +R++ SW MI+ +A
Sbjct: 242 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 301
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEH 267
+ + + +M+ G P+ TF V ACAS ++ G ++ +I+ N Y I + +
Sbjct: 302 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT--LVN 359
Query: 268 YIAIIKVLGSAGHLIEAEEFVERM 291
A++ + S G L EA +++
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQI 383
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L C +L+S+ +++H+ + + A +V L N+++ YGKC + AR FD + ++N
Sbjct: 34 LRQCQDLESV---RQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKND 89
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW M++ YA NG L L+++M P+ + V ACAS EA++EG
Sbjct: 90 YSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSR 146
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G+ + +++ + G L +A+ ERM +V W A+ G E
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFE 206
Query: 315 LEDRAEELLGDLDPS 329
R E + D++PS
Sbjct: 207 EAIRLYEDM-DVEPS 220
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 113 EAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EAIE+ Q Y F+S+L +C ++ + G+ VH+ + + + + L+
Sbjct: 305 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 364
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP-DK 229
++Y + AR +FDQ+ R+ W ++I GY+ G L L+ +M+ T P K
Sbjct: 365 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 424
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
+ V +ACAS A + ++ D G++ +++ + G+L A + +
Sbjct: 425 IIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQVFD 483
Query: 290 RMPFEPTVEVWEALRNFAQIHGD 312
+M T+ W L HG+
Sbjct: 484 KMSSRDTL-AWTTLIAGYAKHGE 505
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 202/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C L + GK +H + DV + N LIEMY KC + R + +VF ++ +
Sbjct: 522 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 581
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W +IS G+G + F +M G PD F+ + AC+ + V+EG YF
Sbjct: 582 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 641
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK DY I P IEHY ++ +L + L +AE+F+ MP +P +W AL + ++ GD
Sbjct: 642 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGD 701
Query: 313 VELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
E+ +R E LG D ++I I KK + +E
Sbjct: 702 TEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWME 761
Query: 352 EKNRVSDYRSTDLYRGEYE---KMKG-LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+N+V + + + ++E K+ G L G M + GY+ + ++VLHDIDE+ K L H
Sbjct: 762 IQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGH 821
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GL++T P PL+++KNLR+C DCH K +SKIV REL+VRD RFH F+DG
Sbjct: 822 SERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDG 881
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 882 ACSCGDYW 889
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S++++C L EM K +H+ + F D+ + N LI+MY + + ARKVF+++
Sbjct: 118 FPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ SW+ +ISGY ANG + L ++ + R G PD T V AC +V+EG
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +CG L S+E G +H L+ KDV +NN L+ MY K R++FD++
Sbjct: 220 SSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL 279
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+ SW+ MI GY+ G + + LF +M PD T + AC G L
Sbjct: 280 RDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHL-----GDLE 333
Query: 252 FEIMKNDYGIVPGIEHYIA----IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
F +DY I G E +I + G+L+ ++E M + +V W ++ N
Sbjct: 334 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS-WNSMIN 390
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +CG+L +E GK VH+ + TS + D +N LI MY KC N +++VF ++
Sbjct: 320 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 379
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
++ SW+ MI+ Y NG + + LF+ M KT PD T++++ +
Sbjct: 380 KDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLS 424
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+FSS+ + + + ++H L+ T V + KLI Y + + VF
Sbjct: 15 LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 190 R-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+ +I NG ++ L L+ + ++ PD TF V ACA G
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------G 127
Query: 249 FLYFEIMKN------DYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
L FE+ K+ D G G + YI A+I + L +A + E MP V W
Sbjct: 128 LLDFEMAKSIHDRVLDMGF--GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-W 184
Query: 301 EAL 303
+L
Sbjct: 185 NSL 187
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 198/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SSLL++C +L + E GK+VH L F+ DV N L+ Y KC + A F L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGL 566
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ + SW MI G A +G G L +F +M P+ T V AC A V E
Sbjct: 567 PEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAK 626
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI EHY +I +LG AG L +A E V MPF+ VW AL +++
Sbjct: 627 RYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRV 686
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR-KKQSATN 348
H D EL A E L L+P K A V K+ + KK+ A +
Sbjct: 687 HRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMS 746
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + +S R Y K+ L M +AGYVP+ LHD+D+ KE L
Sbjct: 747 WVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLL 806
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSERLA+A+ LISTP P+R+ KNLRIC DCH A K +S IV RE+I+RD RFHHF
Sbjct: 807 SHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHF 866
Query: 465 RDGKCSCGDYW 475
RDG CSC DYW
Sbjct: 867 RDGACSCRDYW 877
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS ++++C + +E G++VH ++ + + KDV N L++MY K + R+A VF ++
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP 264
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++ SW+ ISG +G L L QM+ +G P+ T + ACA + A
Sbjct: 265 ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGA------ 318
Query: 251 YFEIMKNDYGIV----PGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
F + + +G + ++YIA ++ + G L +A++ + +P V +W AL
Sbjct: 319 -FNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLV-LWNAL 375
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 108 EGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
G + A+E + Q S+ +VF SS+L +C + +G+++H + + D +
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYI 340
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
L++MY K A+KVFD + +R+L W+ +ISG + Q A+ L LF +MRK G
Sbjct: 341 AFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGF 400
Query: 226 HPDKETFLVVFAACASAEAVKE 247
++ T V + AS EA+ +
Sbjct: 401 DVNRTTLAAVLKSTASLEAISD 422
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 127 GYDV----FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
G+DV +++L S +L++I ++VH L F+ D + N LI+ Y KC A
Sbjct: 399 GFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYA 458
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
+VF++ ++ ++ MI+ + G D + LF +M + G PD + ACAS
Sbjct: 459 YRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASL 518
Query: 243 EAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
A ++G ++ ++K + + + A++ G + +A+ +P E V W
Sbjct: 519 SAYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWS 575
Query: 302 ALRNFAQIHG 311
A+ HG
Sbjct: 576 AMIGGLAQHG 585
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGY 204
G ++H L + D+ + N L+ MYG AR VFD+ +RN SW+ ++S Y
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVP 263
N + + + +F +M G P++ F V AC + ++ G ++ +++ Y
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD--K 235
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ A++ + G + A ++P E V W A + +HG + A ELL
Sbjct: 236 DVFTANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHGH---DQHALELL 291
Query: 324 GDLDPSKAIVDKIPLPPRKKQSA 346
+ S + + L K A
Sbjct: 292 LQMKSSGLVPNVFTLSSILKACA 314
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 65/172 (37%), Gaps = 10/172 (5%)
Query: 134 LLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
LL +S+ G +H LL++ F N L+ Y KC AR+VFD++
Sbjct: 10 LLTRYAATQSLLQGAHIHAHLLKSGLFAV---FRNHLLSFYSKCRLPGSARRVFDEIPDP 66
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LY 251
SW +++ Y+ N D L F MR + E L V CA GF
Sbjct: 67 CHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCN-EFVLPVVLKCAP----DAGFGTQ 121
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G+ I A++ + G G + EA + E W L
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGL 173
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 217/396 (54%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G +A++ Q A A + F S + + N+ +I+ GK++H ++ F D+E
Sbjct: 594 QSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIE 653
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N LI Y KC + AR+ F ++ ++N SW+ MI+GY+ +G G + + LFE+M++ G
Sbjct: 654 VSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVG 713
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ V +AC+ V +G YFE M ++G+VP HY ++ ++ AG L A
Sbjct: 714 EMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRA 773
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV----------- 333
+F+E MP EP +W L + +H +VE+ + A + L +L+P +
Sbjct: 774 RKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVS 833
Query: 334 ------DKIPLPPR----KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQM 379
D+ R KK+ + +E KN V + D L YE + LN +
Sbjct: 834 GKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKA 893
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
E GY D +L+D+++E K+ + HSE+LAI +GL+S +P+ ++KNLR+C DCH
Sbjct: 894 AEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCH 953
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ IK +SKI R +IVRD RFHHF G CSC DYW
Sbjct: 954 SWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS + +C ++++ G+++H S + +D+ + N L+ +Y +C + A F+++
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 578
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ SW+ +ISG+A +G D L +F QM + TF +A A+ +K+G
Sbjct: 579 AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ 638
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA-EEFVERMPFEPTVEVWEALRNFAQ 308
++ I+K G IE A+I G + +A EF E MP + V W A+
Sbjct: 639 IHAMIIKR--GFDSDIEVSNALITFYAKCGSIEDARREFCE-MPEKNDVS-WNAMITGYS 694
Query: 309 IHG 311
HG
Sbjct: 695 QHG 697
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFSS+L C +K ++G+++H L+ + + N L+ +Y + N A KVF ++
Sbjct: 215 VFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ ++ S++ +ISG A G L LF +M++ PD T + +ACAS A+ +G
Sbjct: 275 QSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKG 333
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L +C ++ ++++G+++H + + F +V + + LI+MY K A + L
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT 477
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ ++ SW +ISGYA + A+ L F++M G D F +ACA +A+ +G
Sbjct: 478 EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG 535
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+L +C G+ I +++H + + ++N LI +Y K ARKVFD L
Sbjct: 114 FASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL 173
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
++ SW MISG++ NG + + LF +M G P F V + C + G
Sbjct: 174 CTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGE 233
Query: 249 FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
L+ + K YG +E Y+ A++ + + + AE+ +M + V +
Sbjct: 234 QLHALVFK--YG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGL 289
Query: 307 AQ 308
AQ
Sbjct: 290 AQ 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 59/117 (50%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C + ++ G+++H + + D+ + L+++Y C + + A ++F +
Sbjct: 318 ASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQT 377
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W++M+ + ++ +F QM+ G P++ T+ + C S A+ G
Sbjct: 378 ENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG 434
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LLD C N S+ K++H + F + L NKL+++Y + KVF+ + R+
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ SW +ISG+ L LF M + P + +F V AC+
Sbjct: 76 VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 207/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ +L +C S ++GK+VH + S + L+ MY K + A +VF +
Sbjct: 265 TYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGM 324
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K +L SW MISGYA NGQ + L F+ + +G PD TF+ V +ACA A V +G
Sbjct: 325 PKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGL 384
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F +K+ YGI +HY +I +L +G AE+ + MP +P +W +L +I
Sbjct: 385 GIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRI 444
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIP-------LPPRKKQSATN 348
H +V L A E L +++P S + D++ L K A++
Sbjct: 445 HKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASS 504
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E RV + D + Y +K L +MRE GYV DT +VLHD+++E K++ +
Sbjct: 505 WIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDI 564
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSERLA+A+G+I+TP P+++ KNLRICGDCH IK++SKIV RE+IVRD+ RFHHF
Sbjct: 565 GYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHF 624
Query: 465 RDGKCSCGDYW 475
++G CSC DYW
Sbjct: 625 KNGSCSCRDYW 635
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ +H + D + + L +MY K AR VFD++ R++ SW M+ Y
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
G+ +G LF +M ++G P++ T+ V ACA + K G
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLG 282
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 209/370 (56%), Gaps = 28/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C L S++ G++VH L F DV + + L+ MY KC A+ VFD+ +
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ +ISGYA++G G + L +F +M +G P+K T + + AC+ A ++EG F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M++ + + P +EHY + +LG AG + +A E +E M +P VW AL + H
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLEEK---NRVSDYRSTD-- 363
++L + A + L + +P A ++ I R K ++ + N VS +
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSIN-ASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 364 --------LYRGEYEK----------MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
RG + ++ +G +REAGY PD +VLHD+DEE K +L
Sbjct: 575 EVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLS 634
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AYGL+ P +P+R++KNLR+CGDCH AIK++SK+ RE+I+RD RFHHF
Sbjct: 635 RHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 466 DGKCSCGDYW 475
+G+CSC DYW
Sbjct: 695 NGECSCRDYW 704
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+K V N +I +G+ AR+VFD + R+ ++W MI Y G + L LF Q
Sbjct: 262 MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M+K G P + + + + CA+ +++ G
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYG 350
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 53/200 (26%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
+F L+D I+ +++++++ VKDV + +I G C R+ AR +FD
Sbjct: 147 MFGGLIDD----GRIDKARKLYDMMP----VKDVVASTNMIG--GLCREGRVDEARLIFD 196
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++R+RN+ +W MI+GY N + LFE M P+K
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------PEKTEV--------------- 235
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
+ +++ +G + +AEEF E MP +P + + F
Sbjct: 236 -------------------SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 308 QIHGDVELEDRAEELLGDLD 327
++ G++ R +L+ D D
Sbjct: 277 EV-GEISKARRVFDLMEDRD 295
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 35/174 (20%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
ARK FD L+ + + SW+ ++SGY +NG + LF++M + S
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN--------------VVS 81
Query: 242 AEAVKEGFLYFEIM---KNDYGIVP--GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
+ G++ ++ +N + ++P + + A++K G + EAE RMP
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 297 VEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML 350
V W + F + D G +D ++ + D +P+ + ++TNM+
Sbjct: 142 VS-WTVM--FGGLIDD-----------GRIDKARKLYDMMPV--KDVVASTNMI 179
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 211/370 (57%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ C N +E+G+++H L S+F + + L+ +Y KC A +VF+++
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+NL W+ M+ YA + + LF++M+ +G P+ TFL V AC+ A V EG
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ MK + I P +HY +++ +LG AG L EA E + MP +PT VW AL +H
Sbjct: 340 YFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Query: 311 GDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPR--KKQSATNM 349
+ EL A + + +L P A + L R KK++ +
Sbjct: 399 KNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSW 458
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+EE+N+V + R + + YEK+ L +M +AGY+ DT YVL ++D + K + ++
Sbjct: 459 VEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIR 518
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAIA+GLI+ P P+R++KNLR+CGDCHNAIK MS R +IVRDN RFH F
Sbjct: 519 YHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFE 578
Query: 466 DGKCSCGDYW 475
DGKCSC DYW
Sbjct: 579 DGKCSCNDYW 588
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S SC L ++G+ VH L + + DV + + L++MY KC ARK+FD++
Sbjct: 118 VLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM 177
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RN+ +W M+ GYA G+ + L LF++ + +F V + CA++ ++ G
Sbjct: 178 PQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 221/396 (55%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ GK EA+E Q A S+L +CGN+ ++ G+ H + DV
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVH 424
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + LI+MY KC ++++ VF+ + +NL W+ +++GY+ +G+ + + +FE + +T
Sbjct: 425 VGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR 484
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD +F + +AC EG+ YF +M +YGI P +EHY ++ +LG AG L EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK-------------- 330
+ ++ +PFEP VW AL N ++ +V+L + A + L L+P
Sbjct: 545 YDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAK 604
Query: 331 -------AIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQM 379
+I +K+ KK + ++ KN+V + D + EKM ++ +M
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEM 664
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R++G+ P+ + L D++E+ +E+ L HSE+LA+ +GL++TP PL++IKNLRICGDCH
Sbjct: 665 RKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK +S GRE+ +RD RFHHF+DG CSCGD+W
Sbjct: 725 AVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 51/222 (22%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR- 190
SS+L S G+ +++ MG+++H + +KD + + +++MYGK + K+FD+
Sbjct: 256 SSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEM 315
Query: 191 ----------------------------------KRNLSSWHLMISGYAANGQGADGLML 216
+ N+ SW +I+G A NG+ + L L
Sbjct: 316 METGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI------- 269
F +M+ G P++ T + AC + A+ G ++ +G + H +
Sbjct: 376 FREMQVAGVKPNRVTIPSMLPACGNIAALGHG-------RSTHGFAVRV-HLLDDVHVGS 427
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + G + ++ MP + V W +L N +HG
Sbjct: 428 ALIDMYAKCGRIKMSQIVFNMMPTKNLV-CWNSLMNGYSMHG 468
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +L C L + + GK++H + S D + L MY +C ARKVFD++
Sbjct: 118 VLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRM 177
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ + ++ GYA G + + + +M K+G P+ ++ + + + KE
Sbjct: 178 SEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAV 237
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ F+ M + G P + + VL S G
Sbjct: 238 IMFQKMHH-LGFCP---DQVTVSSVLPSVG 263
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 219/397 (55%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G EAI+ M + A + S+L + L +++ G + H L + D+
Sbjct: 420 QNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDI 479
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
++ L++MYGKC A +F ++ ++ SW+ +IS + +G G + LF++M+
Sbjct: 480 FVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSE 539
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G PD TF+ + +AC+ + V EG F++M+ YGI P ++HY ++ + G AGHL +
Sbjct: 540 GVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEK 599
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI----------- 332
A FV+ MP P V VW AL +IH +VEL + L ++
Sbjct: 600 AFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAK 659
Query: 333 ------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
VD++ R KK + +E ++ + + + + Y +++ L +
Sbjct: 660 LGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAK 719
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
M+ GYVPD +VL D++++ KE L HSERLA+A+G+ISTPP+ L+I KNLR+CGDC
Sbjct: 720 MKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDC 779
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
HNA K +SKI RE+IVRD+ RFHHF+DG CSCGDYW
Sbjct: 780 HNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL-RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SL L + + +H + R F+ D+ L N +I+MY K ARKVF+ L
Sbjct: 346 SLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV 405
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEG-- 248
+++ SW+ +I+GY+ NG + + ++ MR +G P++ T++ + A + A+K+G
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMK 465
Query: 249 --------FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
FLYF+I + ++ + G G L +A +P + +V W
Sbjct: 466 AHGQLIKNFLYFDIFVST-----------CLVDMYGKCGKLADALSLFYEVPHQSSVS-W 513
Query: 301 EALRNFAQIHG 311
A+ + +HG
Sbjct: 514 NAIISCHGLHG 524
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 13/177 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ +CGNL G++VH L+ F DV + I Y + LA +FD +
Sbjct: 145 FPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMM 201
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ MISG+ NG+ A+ L +F++MR D T + C + + G
Sbjct: 202 IRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG-- 259
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + Y I G+E + A+I + G L AE +M V W +L
Sbjct: 260 ---VLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVS-WNSL 312
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GKV EA+E + S D SSLL C L I G +H D+ +
Sbjct: 219 GKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVC 278
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI MY K R A +F+Q++ R++ SW+ +++ + N + L ++ +M G
Sbjct: 279 NALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVV 338
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI-------AIIKVLGSAG 279
PD L+ + AS A FL ++ +G V ++ AII + G
Sbjct: 339 PD----LLTLVSLASVAAELGNFLS---SRSIHGFVTRRCWFLHDIALGNAIIDMYAKLG 391
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
+ A + E +P + + W +L
Sbjct: 392 FIDSARKVFEGLPVKDVIS-WNSL 414
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+ + K++H LL S + + L+ KLI Y + AR FDQ++ +++ +W+ MIS
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 204 YAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAE 243
YA G + F + T D TF V AC + +
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD 156
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 209/372 (56%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRT--SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F S+LD+C + +++ G+R+HE + DV + L+ MY KC N LA +FD+
Sbjct: 281 FVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDK 340
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +L W+ +I+ A +GQ L LFE+MR G P TF V AC+ A + +G
Sbjct: 341 IAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 400
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+F D+GI P EH+ ++ +LG AG ++++E+ + MPFEP W A +
Sbjct: 401 RKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACR 460
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
+ +++ A E L LDP K + + L K++
Sbjct: 461 TYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGR 520
Query: 348 NMLEEKNRVSDYRSTDLYR---GE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K+RV ++ S DL GE + +++ L M+ AGYVPDT VLHD+ +E KE
Sbjct: 521 SWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETM 580
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ YHSE+LA+A+ L++TP P+R++KNLR+C DCH A K +SK+V RE++VRD RFH
Sbjct: 581 VGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHR 640
Query: 464 FRDGKCSCGDYW 475
F++G CSCGDYW
Sbjct: 641 FQNGACSCGDYW 652
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 107 KEGKVREAIEYMGQ-DASASAGYDV-FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G REA+ Q D A V S LD+C +L + G +H+ + V
Sbjct: 154 RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 213
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ +YGKC A + F Q+ ++N+ +W + + YA N + D + + +M G
Sbjct: 214 VGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 273
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFE-IMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P+ TF+ V ACA+ A+K+G E I G+ + A++ + G+L
Sbjct: 274 LAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLAL 333
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A +++ V +W +L HG E
Sbjct: 334 AGNMFDKIAHLDLV-LWNSLIATNAQHGQTE 363
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L +C + + I +G+ + + + ++ + L+ +YGK + A VF ++
Sbjct: 80 SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSH 139
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ +W M++ YA NG + L LF QM G P+K T + ACAS ++ G L
Sbjct: 140 RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALM 199
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ ++ GI G+ A++ + G G + A E ++ E V W A+
Sbjct: 200 HQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI-VEKNVVAWSAI 249
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
++++ L N LI++Y KC A VF ++ +N+ SW +M++ +A N + F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEH----YIAII 272
M G +P + + +AC A + G + I+ GIE A++
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGT------GIEEESIVQTALV 118
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G GH +A RM V W A+
Sbjct: 119 SLYGKLGHCTDAASVFLRMSHRDVV-AWSAM 148
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 221/402 (54%), Gaps = 28/402 (6%)
Query: 102 LLSLCKEGKVREAIE-YMGQDASASAGYD-VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+++ + G +A+ YMG + D + SS+L +C L + G+ +H + S
Sbjct: 288 IVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCI 347
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++ + + L++MYGKC A +VF + +RNL +W+ MI GYA G + L +F+
Sbjct: 348 DANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDA 407
Query: 220 M-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M R G P+ T + V AC+ K+G+ F+ M+ +G+ P EHY ++ +LG A
Sbjct: 408 MIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRA 467
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----IV 333
G A E ++RMP P++ VW AL ++HG EL A E L +LDP + +
Sbjct: 468 GMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLS 527
Query: 334 DKIPLPPR----------------KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG--- 374
+ + R KK+ + + KN V + + D +++
Sbjct: 528 NMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLA 587
Query: 375 -LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLR 433
L QM+ +GY+PDT+Y L+D++EE KE + HSE+LA+A+GLI PP +P+RI KNLR
Sbjct: 588 KLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLR 647
Query: 434 ICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IC DCH A K +S IVGRE+IVRDN RFH+F+ +CSC DYW
Sbjct: 648 ICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 128/317 (40%), Gaps = 37/317 (11%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+ ++C + +G++ H + T F DV ++N +++ YGKC AR VFD +R R
Sbjct: 220 AFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVR 279
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N SW MI YA +G D L ++ R TG P V CA + G
Sbjct: 280 NSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALH 339
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHG 311
+ I I A++ + G G + +AE+ MP E + W A+ +A I
Sbjct: 340 AVAVRSC-IDANIFVASALVDMYGKCGGVEDAEQVFLDMP-ERNLVTWNAMIGGYAHI-- 395
Query: 312 DVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEK 371
GD + A+ D + R ++ N + N ++ L + YE
Sbjct: 396 ------------GDAQNALAVFDAM---IRSGGTSPNHITLVNVITACSRGGLTKDGYE- 439
Query: 372 MKGLNGQMRE-AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIK 430
L MRE G P T + +D + ER AY +I RMP+R
Sbjct: 440 ---LFDTMRERFGVEPRTEHYACVVDLLGRAG----MEER---AYEIIQ---RMPMR--P 484
Query: 431 NLRICGDCHNAIKIMSK 447
++ + G A K+ K
Sbjct: 485 SISVWGALLGACKMHGK 501
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 137 SCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS 195
+C + +G ++H L LR D ++ ++MY K LAR++F+++ RN+
Sbjct: 122 ACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVI 181
Query: 196 SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+W+ +++ +G+ + + +R+ G P+ + F ACA A + G
Sbjct: 182 AWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLG 234
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 210/372 (56%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ + +L I +G+++H L S + V + L++MY KC A + FD++
Sbjct: 638 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 697
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW+ +IS YA G+ + + +FE M G +PD TFL V AAC+ E
Sbjct: 698 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 757
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK+ Y I P EHY +I LG G + ++ + MPF+ +W ++ + +I
Sbjct: 758 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 817
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR--KKQSAT 347
HG+ EL A + L ++P+ A V KI + R +K+S
Sbjct: 818 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI-MRDRGVRKESGY 876
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K ++ + S DL +++K L +M + GY PD LH +D E K ++
Sbjct: 877 SWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLES 936
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSERLAIA+ L++TP P+RI+KNL C DCH IK++SKIV R++IVRD++RFHH
Sbjct: 937 LKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHH 996
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 997 FKDGVCSCGDYW 1008
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++++L G+L + +GK++H L + L N LI+MY KC A+ F
Sbjct: 538 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 597
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+++ SW +I+GY NGQ + L LF MR+ G PD+ TF + A +S + G
Sbjct: 598 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 657
Query: 250 LYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ ++++ Y + G ++ + G L EA + MP ++ W A+
Sbjct: 658 LHSYLIRSGYKSSVFSG----SVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAV 708
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
S V +V +NN L++ Y KC R++FD++ +R+ S++++I+ YA N A L L
Sbjct: 463 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 522
Query: 217 FEQMRKTG 224
F +M+K G
Sbjct: 523 FREMQKLG 530
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-----KDVELNNKLIEMYGKCCNTRL 181
G+DV + L+ L+S+ +H R A K++ N ++ Y +
Sbjct: 252 GFDVLTYRLNL--GLRSLLSSGHLH---RARAMFDQMPHKNIFSLNLILSAYSSSGDLPA 306
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
A+ +F RN ++W +M+ +AA G+ +D L LF M G PD+ T V
Sbjct: 307 AQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL 361
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FDQ+ +N+ S +L++S Y+++G LF + PH + T+ ++ A A+
Sbjct: 276 ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMMRAHAA 331
Query: 242 AEAVKEGFLYFEIMKNDYGIVP 263
A + F M + G++P
Sbjct: 332 AGRTSDALSLFRAMLGE-GVIP 352
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 220/400 (55%), Gaps = 35/400 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G +A+E G+ A D + S+L +C + ++ +G V + +V +V
Sbjct: 306 KCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVV 365
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ LI MY C + A +VFD++ ++NL + +M++G+ +G+G + + +F +M G
Sbjct: 366 VGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKG 425
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD+ F V +AC+ + V EG F M DY + P HY ++ +LG AG+L EA
Sbjct: 426 VTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEA 485
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS--------------- 329
+E M +P +VW AL + ++H +V+L + + L +L+P
Sbjct: 486 YAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAE 545
Query: 330 ---------KAIVDKIPL--PPRKKQSATNMLEEKNRVSDY---RSTDLYRGEYEKMKGL 375
+A+V K L PP N + + V D +S D+ Y K+K L
Sbjct: 546 RRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDI----YAKLKDL 601
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
N Q+++AGY PDT VL+D++EE KEK L HSERLA+A+ LI+T P +RI KNLR+C
Sbjct: 602 NEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVC 661
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
GDCH IK++SK+ RE+I+RD RFHHFRDG CSCG YW
Sbjct: 662 GDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +CG+L EMG++VH L+ +DV + N ++ MY K + AR VFD++ R+
Sbjct: 130 VLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRD 189
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L+SW+ M+SG+ NG+ +F MR+ G D+ T L + +AC +K G
Sbjct: 190 LTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVG 244
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH- 151
L S + + K G+ R A E G D +LL +CG++ +++GK +H
Sbjct: 190 LTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHG 249
Query: 152 ELLRT--SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
++R S V + L N +I+MY C + ARK+F+ LR +++ SW+ +ISGY G
Sbjct: 250 YVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGD 309
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHY 268
L LF +M G PD+ T + V AAC A++ G + ++K Y V +
Sbjct: 310 AFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGY--VVNVVVG 367
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + + G L+ A + MP E + + IHG
Sbjct: 368 TALIGMYANCGSLVCACRVFDEMP-EKNLPACTVMVTGFGIHG 409
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 123 SASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNT 179
S+++ +D +LL S N KS+ ++H + T ++ + L KL Y C +
Sbjct: 15 SSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHM 74
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A+ +FDQ+ +N W+ MI GYA N + L L+ +M G PD T+ V AC
Sbjct: 75 PYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC 134
Query: 240 A 240
Sbjct: 135 G 135
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 221/399 (55%), Gaps = 30/399 (7%)
Query: 107 KEGKVREAIEYMGQ----DASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVK 161
+ G +A+E + + D S L +C +L ++ +GK++H LR
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV 511
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+ ++N LI+MY KC + AR VFD + ++N +W +++GY +G G + L +FE+MR
Sbjct: 512 PLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR 571
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ G D T LVV AC+ + + +G YF MK D+G+ PG EHY ++ +LG AG L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRL 631
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRA----EELLGDLDPSKAIVDKIP 337
A +E MP EP VW AL + +IHG VEL + A EL + D S ++ +
Sbjct: 632 NAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMY 691
Query: 338 LPPRKKQSAT---NMLEEK--------NRVSDYR-STDLYRGE---------YEKMKGLN 376
+ + T +++ K + V + +T + G+ Y+ +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHM 751
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
++++ GYVP+T + LHD+D+E K+ L HSE+LA+AYG+++TP +RI KNLR+CG
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH A MS+I+ E+I+RD+ RFHHF++G CSC YW
Sbjct: 812 DCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +CG + S+ G H L R + F+ +V + N L+ MY +C + ARKVFD++
Sbjct: 130 FPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP 189
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS--AEAVKE 247
++ SW+ +I YA G+ L +F +M + G PD T + V CAS ++ +
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGK 249
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNF 306
F F + ++ + ++ + G + EA MP + V W A+ +
Sbjct: 250 QFHGFAVTSE---MIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVS-WNAMVAGY 305
Query: 307 AQI 309
+QI
Sbjct: 306 SQI 308
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHEL-------LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
S+L C ++ ++ GK +H LR + + + N+LI+MY KC +AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAM 429
Query: 186 FDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACAS 241
FD L ++R++ +W +MI GY+ +G L L +M P+ T ACAS
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
A+ G ++ ++N VP +I + G + +A + M E W
Sbjct: 490 LAALSIGKQIHAYALRNQQNAVPLFVSN-CLIDMYAKCGDIGDARLVFDNM-MEKNEVTW 547
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
+L +HG EE LG + + I K+
Sbjct: 548 TSLMTGYGMHG------YGEEALGIFEEMRRIGFKL 577
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGY---DV-FSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
S K GK + A+E M + G+ D+ ++L C ++ + +GK+ H TS
Sbjct: 202 SYAKLGKPKMALE-MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEM 260
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++++ + N L++MY K A VF + +++ SW+ M++GY+ G+ D + LFEQ
Sbjct: 261 IQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQ 320
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M++ D T+ + A E M + GI P I+++ S G
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVG 379
Query: 280 HLIEAEE 286
L+ +E
Sbjct: 380 ALMHGKE 386
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 219/397 (55%), Gaps = 31/397 (7%)
Query: 107 KEGKVREAI---EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G EA+ E M ++ Y + S++D+C L +E+GK+VH L AF +
Sbjct: 313 QHGHTSEALRFYELMQEEGVVPDDY-TYVSVIDACATLGDMEVGKQVHRRLGDRAF-QVT 370
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
EL N L+ MYGKC +AR +FD+ K +++ W+ MI YA + LF MR
Sbjct: 371 ELANSLVNMYGKCGILDVARSIFDKTAKGSVT-WNAMIGAYAQHSHEQQAFELFLLMRLD 429
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G P TF+ V +ACA+A +E YF M+ D+G+ PG HY +++ LG AG L +
Sbjct: 430 GEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSD 489
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI----VDKIPLP 339
AE ++ MPFEP V W + + HGD++ A + +DP + + +I
Sbjct: 490 AEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHAD 549
Query: 340 PRKKQSATN----MLEEKNRVSDYRS-----TDLYR---GE---------YEKMKGLNGQ 378
Q A+ ML+ R + RS T +Y G+ ++++K L+ +
Sbjct: 550 AGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKE 609
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
M+ AGY PD +V HD++ KE L HSERLAIA+G+IST PLRI+KNLR+CGDC
Sbjct: 610 MKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDC 669
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H K+ SKI RE+IVRD+ RFHHF++G CSC D+W
Sbjct: 670 HAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ SC L ++ G+R+H+L+R DV ++N L+ MYGKC + AR VF+ +N
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW ++I+ A +G+ + L LF +M K G P +F AC++
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ YG + +++ + G L E+ + E M E W A+
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMT-ELNAVSWNAM 208
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
+ S Y S D LKS + +H+ + + F +DV N ++ MYGKC + A
Sbjct: 235 ACSVTYITLMSAYDQPSQLKS---ARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDA 289
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+F + + ++ +W+ MI+ Y+ +G ++ L +E M++ G PD T++ V ACA+
Sbjct: 290 EAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACAT 348
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++ +++C + + G+ +H LLR F V L+ MY KC + + K F+ +
Sbjct: 138 FTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESM 197
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+ N SW+ MI+ +A + +G + L ++M G T++ + +A +K
Sbjct: 198 TELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSAR 257
Query: 249 FLYFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+++ I++ D +V I+ + G G L +AE + M +P V W +
Sbjct: 258 YIHDCILRTGFDQDVVN------VILNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAA 310
Query: 307 AQIHGDVELEDRAEELL 323
HG R EL+
Sbjct: 311 YSQHGHTSEALRFYELM 327
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 221/400 (55%), Gaps = 35/400 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K + +EA+E + +AS D + S++ +C +L ++ +G VH + ++ D++
Sbjct: 97 KSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLK 156
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L LI+MY KC + A++VFD++ ++++ +W MI G A +G G + L LF +M G
Sbjct: 157 LGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEG 216
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ V AC V EG YF M +GI P +EHY ++ +LG +GH+ EA
Sbjct: 217 MKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEA 276
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPP 340
+ + M FEP +W AL +IH +VE+ + A L LDP ++ I
Sbjct: 277 RQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQA 336
Query: 341 RKKQSATNM-----------------LEEKNRVSDY--------RSTDLYRGEYEKMKGL 375
+ M +E ++ ++ RS ++YR E M
Sbjct: 337 NSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMD-- 394
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
++++AGY P T VL DIDE++KE++L HSE+LAIA+ L++TP R +RI KNLR C
Sbjct: 395 --RLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRAC 452
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH+A+K++S + R+LIVRD RFHHF +G+CSC DYW
Sbjct: 453 EDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++D+ N +I Y LAR++FD R+ SW MIS YA + + + L L+ +
Sbjct: 51 MRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWRE 110
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M PD T + V +AC+ A+ G ++++ I ++ A+I + G
Sbjct: 111 MHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNR-IELDLKLGTALIDMYAKCG 169
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
+ A+ +RMP E V+ W ++
Sbjct: 170 DIESAQRVFDRMP-EKDVQTWSSM 192
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 209/372 (56%), Gaps = 33/372 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+G+ +HE +R V++N LI+MYGKC + A VF + R
Sbjct: 248 SVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESR 307
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W +MI YA + G + + LFE+M+K G PD TFL V AC+ + V EG YF
Sbjct: 308 DRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYF 367
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ ++G+VPGI+HY + +L +G L A EF++ +P +PT +W L + GD
Sbjct: 368 DSMR-EFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGD 426
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVS--------------- 357
+L + E + +LD S D + + T EE NRV
Sbjct: 427 ADLGKQVFERILELDDSHG-GDYVIF--SNLCANTGRWEEMNRVRKLMNEKGVVKVPGCS 483
Query: 358 ----DYRSTDLYRGEYEKMKGLNG---------QMREAGYVPDTRYVLH-DIDEEAKEKA 403
D R + + G+ K L+ Q++ AGYVP+T +V H ++ EE K +
Sbjct: 484 SIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSHVFHVEMGEEEKAVS 543
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSE+LAI++GL++T P LR++KNLR+C DCH+ K++S + R +I+RD RFHH
Sbjct: 544 LRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHH 603
Query: 464 FRDGKCSCGDYW 475
F DG CSCGDYW
Sbjct: 604 FEDGVCSCGDYW 615
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C ++ E G++ H + + + LI MY +C + R AR +F ++
Sbjct: 145 FVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVD 204
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ S++ MI+ + + + L+LF +M+ G T + V +ACA A++ G
Sbjct: 205 GECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRW 264
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
E ++ + ++ A+I + G G L +A + M
Sbjct: 265 IHEYVRK-VQLDSLVKVNTALIDMYGKCGSLEDAISVFQGM 304
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 213/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SL+ + ++ + G+++H + + F D ++N L+ MY +C A + F++L
Sbjct: 452 TFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL 511
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ RN+ SW MISG A +G L LF M TG P+ T++ V +AC+ V+EG
Sbjct: 512 KDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGK 571
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M+ D+G++P +EHY ++ +L +G + EA EF+ MP + VW+ L +
Sbjct: 572 EYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRS 631
Query: 310 HGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATN 348
H ++E+ + A + + +L+P V +I R K++ +
Sbjct: 632 HDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691
Query: 349 MLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N ++R+ D R + Y K+ L G+++ GYVPDT VLHD+ +E KE+ L
Sbjct: 692 WMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYL 751
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+GLI+T P+RI KNLR+C DCH+AIK MSK RE+I+RD+ RFH
Sbjct: 752 LQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRM 811
Query: 465 RDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 812 KDGECSCGEYW 822
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR---LARKVF 186
SS++ +C L S+ +G ++H L F D ++ L++MY K + A KVF
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVF 315
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGPHPDKETFLVVFAACAS 241
+++RK ++ SW +ISGY +G + +M LF +M P+ T+ + ACA+
Sbjct: 316 ERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACAN 371
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 144 IEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMI 201
+ +G+ +H LLR +D + N L+ +Y +C AR VFD +R R++ SW M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
S A NG + L+L +M ++G P+ T V AC E + + G+
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 262 V-PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
I A+I +L G L A + + + E TV VW L
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLL 225
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 82 SQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL 141
++N D +RG + S L + G RE++ +G+ S LL + L
Sbjct: 103 ARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLE--------SGLLPNAYTL 154
Query: 142 KSIEMGKRVHELL------------RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ HEL + + D+ + + LI+M + + ARKVFD L
Sbjct: 155 CAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGL 214
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ + W L+IS Y + + +F + G PD+ T + +AC +V+ G
Sbjct: 215 IEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGL 274
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 216/370 (58%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS L +C L++++ GK +H + DV + N L+ MY +C N A VF +
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN 365
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ SW+ +I G A +G G L+ F QM + G P++ TF + +AC+ + + +G
Sbjct: 366 EKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRC 425
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+FE + V +HY ++ +LG G L EAEE V MP + +W AL + ++H
Sbjct: 426 FFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVH 485
Query: 311 GDVELEDRAEELLGDLDPS-----------------KAIVDKIPLPPRK----KQSATNM 349
++E+ +RA + + DL+P+ A V ++ + ++ KQ ++
Sbjct: 486 SNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSW 545
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ + + ++ S D L YEK+ L +++E GYVPD ++ LHD+++E KE+ L
Sbjct: 546 VVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLS 605
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSERLAIA+GL+ST + ++KNLR+CGDCH+ IK+MSKIVGR+++VRD+ RFHHF+
Sbjct: 606 FHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFK 665
Query: 466 DGKCSCGDYW 475
+G CSC DYW
Sbjct: 666 NGICSCSDYW 675
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSI 144
D + + + LD+N GK EA+ + + + F+ +L +C N
Sbjct: 166 DVISWTSMIGGLDLN-------GKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEF 218
Query: 145 EMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+G +VH +++ F + ++ LI Y C A K+F++ +N+ W +++
Sbjct: 219 NLGVQVHGHVVKLGCFFHEF-ISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTA 277
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
Y N + D L +F M K G P++ TF + AC EA+ +G
Sbjct: 278 YVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKG 322
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++++++ +E+ +R L VKDV N ++ Y + ++F+++
Sbjct: 108 WTTMVNGYLKFGRVELAQR----LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMP 163
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
R++ SW MI G NG+ + L +F++M ++G P TF V +ACA+A
Sbjct: 164 VRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANA 215
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+DV N +I+ C N +A ++FD++ ++N+ SW M++GY G+ LF
Sbjct: 71 VRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLD 130
Query: 220 M 220
M
Sbjct: 131 M 131
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 209/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++++C + ++E GK++H S + +++ L+ MY K N A KVF +
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ SW+ MI+GY +G L +F+ M+ G D TF+ V AC A V+EG
Sbjct: 568 EERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGE 627
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF IM DY I IEHY ++ + AG +A + + MPF + +W L ++
Sbjct: 628 KYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRV 687
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR-KKQSATN 348
H ++EL A E L L P+ A+ V K+ + KK++ +
Sbjct: 688 HRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747
Query: 349 MLEEKNRVSDYRSTDLYRG----EYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KNR+ + + D+ Y K++ L+ ++++ GY PDT YV HD++EE KE L
Sbjct: 748 WIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAIL 807
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIAYGLI+ PP P++I KNLRICGDCHN I+++S I R LIVRD+ RFHHF
Sbjct: 808 SQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHF 867
Query: 465 RDGKCSCGDYW 475
+ G CSCG YW
Sbjct: 868 KGGVCSCGGYW 878
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L + REA+ S+ G D S L CG L +G++VH S F
Sbjct: 76 LFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGF 135
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++DV + L++MY K + R +FD++ +N+ SW ++SGYA NG + + L Q
Sbjct: 136 LEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQ 195
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
M+ G +P+ TF V A A ++ G ++ I+KN +
Sbjct: 196 MQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L + + IE G +VH ++ + F + N LI MY K A VFD +
Sbjct: 208 FATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMV 267
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-EGF 249
R+ +W++MI GYAA G +G +F +MR G + F C+ +
Sbjct: 268 VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQ 327
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ ++KN Y I A++ + EA + V W A+
Sbjct: 328 LHCGVVKNGYEFAQDIR--TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H + + + K + L++ Y K N + +VF + +++ +W M++G A
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTR 484
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ +F Q+ K G P++ TF V AC+S+ A E
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVE 523
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 196/338 (57%), Gaps = 25/338 (7%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D LN L++MY KC + A ++F + R++ W+ +I+G+A +G G + L +F +M
Sbjct: 307 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME 366
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ G P+ TF+ + AC+ A V EG FE M + +G+VP IEHY ++ +LG AG L
Sbjct: 367 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLL 426
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------------- 328
EA E ++ MP +P VW AL ++H + +L + A L +++P
Sbjct: 427 DEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIY 486
Query: 329 --------SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMR 380
+ + + KK+ +++E V ++ D + ++ + +MR
Sbjct: 487 AAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMR 546
Query: 381 ----EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
EAGYVPDT VL +IDEE KE AL YHSE+LA+A+GLIST P P+RI+KNLR+C
Sbjct: 547 RKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCN 606
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDY 474
DCH A K++SKI GR +IVRD RFHHFR+G CSCGDY
Sbjct: 607 DCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 204/374 (54%), Gaps = 32/374 (8%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS +D+C + I+ G++ H + + + + + L+ MY + + AR VF++
Sbjct: 504 ISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQ 563
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ MISGYA +G + L F QM G D TFL V C A VKEG
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQ 623
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M D+ I P +EHY ++ + AG L E +E MPF VW L ++
Sbjct: 624 QYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRV 683
Query: 310 HGDVEL-------------EDRAEELL-----------GDLDPSKAIVDKIPLPPRKKQS 345
H +VEL +D A +L + D + ++D + KK++
Sbjct: 684 HKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKV---KKEA 740
Query: 346 ATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
+ ++ KN+V + + D L Y K+K + ++++ GY P+T VLHDI EE KE
Sbjct: 741 GCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKE 800
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L HSERLA+A+GLI+TPPR PL+I+KNLR+CGDCH +K++S I RE+I+RD RF
Sbjct: 801 TMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRF 860
Query: 462 HHFRDGKCSCGDYW 475
HHF G CSCGD+W
Sbjct: 861 HHFNAGACSCGDFW 874
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S +L CG + G+++H L F + +V + L++MY KC R VF+ +
Sbjct: 103 SRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP 162
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
KRN+ +W +++GY +D + LF +MR G P+ TF V +A AS AV G
Sbjct: 163 KRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L + + ++++G+RVH V + N LI MY KC A+ VF Q+
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME 263
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R++ SW+ +++G N + L LF R + + T+ V CA+ + +
Sbjct: 264 TRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQ 323
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ ++K+ + + AI+ G L +A MP V W A+
Sbjct: 324 LHSCVLKHGFHSDGNV--MTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQ 381
Query: 310 HGDVEL 315
+ D+ L
Sbjct: 382 NADIPL 387
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+S+++ C NLK + + +++H + F D + +++ Y KC A +F +
Sbjct: 305 YSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMP 364
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW MI G N LF +MR+ P++ T+ V A + +
Sbjct: 365 GSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA---SIPILLPQ 421
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE--RMPFEPTVEVWEALRNFA 307
++ +I+K +Y P + +L S L EE + +M V W A+ +
Sbjct: 422 IHAQIIKTNYQHAPSVG-----TALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCY 476
Query: 308 QIHGDVE 314
GD +
Sbjct: 477 SQAGDCD 483
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 1/163 (0%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H + + + + L+ Y K NT A +F + +++ +W M+S Y+ G
Sbjct: 421 QIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAG 480
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+F +M G P++ T ACAS A + F + Y I
Sbjct: 481 DCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVG 540
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A++ + G + A ER V + +AQ HG
Sbjct: 541 SALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQ-HG 582
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 223/424 (52%), Gaps = 30/424 (7%)
Query: 80 GHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIE---YMGQDASASAGYDVFSSLLD 136
GH+Q L + + S + + + G EAIE M + + S+L
Sbjct: 147 GHAQKVFGLLIKD--VVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILP 204
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+ ++ +++ G R+H + + DV + LI+MYGKC A +F Q+ ++N
Sbjct: 205 AYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVP 264
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+ MIS Y +G G L LF +M+ PD TF+ + +AC+ + V + F +M+
Sbjct: 265 WNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMME 324
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE 316
+YGI P ++HY ++ + G AG L A F+++MP +P W AL N +IHG++EL
Sbjct: 325 EEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELG 384
Query: 317 DRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATNMLEEKNR 355
A E L ++D VD + R +K + + N+
Sbjct: 385 KHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNK 444
Query: 356 VSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERL 411
V + + + + Y +++ L +++ GYVPD +VL D++E+ KE L HSERL
Sbjct: 445 VDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERL 504
Query: 412 AIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSC 471
AIAYG+IST P+ P+RI KNLR+CGDCH K +S I RE+IVRD+ RFHHF+ G CSC
Sbjct: 505 AIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSC 564
Query: 472 GDYW 475
GDYW
Sbjct: 565 GDYW 568
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +CG+L GK++H L+ F DV + L+ MY + ARK+FD + R+
Sbjct: 3 VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
SW+ MISGY NG A+ L + ++MR G D T V CA + G L
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKL 116
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 22/263 (8%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C+ G EA++ + D + S+L C + I GK +H + ++
Sbjct: 71 CQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
++N LI MY K + A+KVF L K ++ SW+ +I+GYA NG ++ + ++ M +
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189
Query: 224 GP-HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P++ T++ + A + A+++G ++ +++KN + + +I + G G L
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN--CLYSDVFVGTCLIDMYGKCGKL 247
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPP- 340
+A ++P + +V W A+ + +HGD E +A EL ++ + D I
Sbjct: 248 DDAISLFYQVPRKNSVP-WNAMISCYGVHGDGE---KALELFREMKAERVKPDHITFVSL 303
Query: 341 ----------RKKQSATNMLEEK 353
Q NM+EE+
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEE 326
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 227/419 (54%), Gaps = 37/419 (8%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIE 145
P R A SL + KE K+ EA++ + G+ +++L C + ++
Sbjct: 92 PERNVASWNSL---ISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALL 148
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
GK +H + SA DV + N L++MY KC R++FD +R ++L+SW+ M++GYA
Sbjct: 149 SGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYA 208
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
NG + LF +M G PD TF+ + + C+ A ++G F M+ D+G+ P +
Sbjct: 209 INGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSL 268
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
EHY ++ +LG AG + A V+ MP + + +W +L N ++H +V L + L +
Sbjct: 269 EHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFE 328
Query: 326 LDP--------------SKAIVDKIPLPPR-------KKQSATNMLEEKNRVS------- 357
L+P + + D + + +K++ + ++ KN++
Sbjct: 329 LEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAGGG 388
Query: 358 -DYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG 416
++R++D Y+ + K++ M E GY+P+T VLHD++EE K + HSERLA +
Sbjct: 389 FEFRNSDEYKKIWNKLR---EAMEEFGYIPNTDVVLHDVNEETKAMWVCGHSERLATVFS 445
Query: 417 LISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LI T MP+RI KNLR+C DCH+ IKI+S++ GR +++RD RFHHF++G CSC DYW
Sbjct: 446 LIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 107 KEGKVREA----IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
K G +REA +E + G FS+ L +C +L+ + +G+ VH + S+ D
Sbjct: 7 KNGFLREALLVYVEMLWN--CMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPD 64
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+NN L+ +Y +C KVFDQ+ +RN++SW+ +ISG+ + + L +F +M++
Sbjct: 65 QVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQR 124
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
G T + CA A+ G
Sbjct: 125 EGMGFSWVTLTTILPICARVTALLSG 150
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 206/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ L +C L ++E GK +H L + D L LI+MY KC A +VF ++
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+++ +W +ISGYA +G G + + F +M+K G P+ TF V AC+ V+EG L
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M+ DY + P IEHY I+ +LG AG L EA+ F++ MP +P +W AL +IH
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 311 GDVELEDRAEELLGDLDP-------SKAIVDKIPLPPRKKQSATNMLEEK---------- 353
++EL + E+L +DP KA + + K +++E+
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 354 ----NRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHD-IDEEAKEKAL 404
++ + D E EK++ + ++ E GYVP+ +L D +D++ +E +
Sbjct: 490 ISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIV 549
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAI YGLI T P +RI+KNLR+C DCH K++SKI R++++RD RFHHF
Sbjct: 550 HQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHF 609
Query: 465 RDGKCSCGDYW 475
RDGKCSCGDYW
Sbjct: 610 RDGKCSCGDYW 620
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 39/224 (17%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
+SA F SLL +C NL + E ++H + + DV N LI Y N +L
Sbjct: 109 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 168
Query: 182 ARKVFD-------------------------------QLRKRNLSSWHLMISGYAANGQG 210
A +FD ++ ++N SW MISGY
Sbjct: 169 AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMN 228
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL---YFEIMKNDYGIVPGIEH 267
+ L LF +M+ + PD + +ACA A+++G Y + V G
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLG--- 285
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+I + G + EA E + + + +V+ W AL + HG
Sbjct: 286 -CVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYHG 327
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 212/370 (57%), Gaps = 29/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S++L S + S+E+ + + + S + D +N LI+MY KC + LAR VFD++
Sbjct: 307 SAVLAS-AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 365
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ W +MI GY +G G + + L+ +M++ G P+ TF+ + AC ++ VKEG+
Sbjct: 366 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 425
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F +M D+GI P +HY ++ +LG AG+L +A +F+ MP +P V VW AL + +IH
Sbjct: 426 FHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHR 484
Query: 312 DVELEDRAEELLGDLDPSKA--------IVDKIPLPPRKKQSATNMLE------------ 351
V L + A E L LDP + L R M +
Sbjct: 485 KVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSI 544
Query: 352 ------EKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
E +V D RS + +E++ L +++ AGYVP VLHD++ E E+ L
Sbjct: 545 EINGNLETFQVGD-RSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLC 603
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSERLA+AYG+IST P LRI KNLR C +CH+AIK++SK+V RE+I+RD KRFHHF+
Sbjct: 604 HHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFK 663
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 664 DGVCSCGDFW 673
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 23/294 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +CG +GK++H F +V + N L+ MY K AR VFD+L
Sbjct: 103 FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 162
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R + SW +ISGY NG + L +F++MR+ PD + V A + E + +G
Sbjct: 163 DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG-- 220
Query: 251 YFEIMKNDYGIVP--GIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
K+ +G+V G+E I++ + G + A F RM +P + +W A+
Sbjct: 221 -----KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMI 274
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA-TNMLEEKNRVSDYRSTD 363
+ +G E A +L ++ VD I + SA LE + Y S
Sbjct: 275 SGYANNGYGE---EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKS 331
Query: 364 LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
YR + GL + G + R V D A + + + + + YGL
Sbjct: 332 EYRDDTFVNTGLIDMYAKCGSIYLARCVF---DRVADKDVVLW--SVMIMGYGL 380
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 212/370 (57%), Gaps = 29/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S++L S + S+E+ + + + S + D +N LI+MY KC + LAR VFD++
Sbjct: 292 SAVLAS-AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 350
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ W +MI GY +G G + + L+ +M++ G P+ TF+ + AC ++ VKEG+
Sbjct: 351 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 410
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F +M D+GI P +HY ++ +LG AG+L +A +F+ MP +P V VW AL + +IH
Sbjct: 411 FHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHR 469
Query: 312 DVELEDRAEELLGDLDPSKA--------IVDKIPLPPRKKQSATNMLE------------ 351
V L + A E L LDP + L R M +
Sbjct: 470 KVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSI 529
Query: 352 ------EKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
E +V D RS + +E++ L +++ AGYVP VLHD++ E E+ L
Sbjct: 530 EINGNLETFQVGD-RSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLC 588
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSERLA+AYG+IST P LRI KNLR C +CH+AIK++SK+V RE+I+RD KRFHHF+
Sbjct: 589 HHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFK 648
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 649 DGVCSCGDFW 658
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 23/294 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +CG +GK++H F +V + N L+ MY K AR VFD+L
Sbjct: 88 FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 147
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R + SW +ISGY NG + L +F++MR+ PD + V A + E + +G
Sbjct: 148 DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG-- 205
Query: 251 YFEIMKNDYGIVP--GIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
K+ +G+V G+E I++ + G + A F RM +P + +W A+
Sbjct: 206 -----KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMI 259
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA-TNMLEEKNRVSDYRSTD 363
+ +G E A +L ++ VD I + SA LE + Y S
Sbjct: 260 SGYANNGYGE---EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKS 316
Query: 364 LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
YR + GL + G + R V D A + + + + + YGL
Sbjct: 317 EYRDDTFVNTGLIDMYAKCGSIYLARCVF---DRVADKDVVLW--SVMIMGYGL 365
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 224/397 (56%), Gaps = 29/397 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA++ + A A Y+VF+ S + + NL I+ GK++H + + + + E
Sbjct: 524 QSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETE 583
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N LI +YGKC + A+ F ++ KRN SW+ +I+ + +G+G + L LF+QM++ G
Sbjct: 584 ISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQG 643
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P TF+ V AC+ V+EG YF+ M N++GI P +HY ++ +LG AG L A
Sbjct: 644 LKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRA 703
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP---------------- 328
+ FVE MP VW L + ++H ++E+ + A + L +L+P
Sbjct: 704 KRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVT 763
Query: 329 ----SKAIVDKIPLPPR--KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQ 378
S+ + KI + R +K+ + +E KN V + D L Y + LN +
Sbjct: 764 GKWASRDQIRKI-MKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDR 822
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
+ + GY + ++ H+ ++E K+ HSE+LA+A+GL+S P MPLR+IKNLR+C DC
Sbjct: 823 LYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDC 882
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H +K S ++GRE+++RD RFHHF +G CSCGDYW
Sbjct: 883 HTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L +C + ++G+ +H + F + + N LI +Y +C + RLA +VF +
Sbjct: 145 VLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDM 204
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +++ +ISG+A G G L +F++M+ +G PD T + AAC++ +++G
Sbjct: 205 LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKG 263
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C + I +G+++H L + F D+ ++ LI+MY K A+++ D +
Sbjct: 348 YPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE 407
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++++ SW MI+GY + + L F++M+ G PD +ACA +AV +G
Sbjct: 408 EKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 85/161 (52%), Gaps = 4/161 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S + +C +K++ G ++H + S + DV + N L+ +Y +C ++ A F+ +
Sbjct: 449 LASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE 508
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ +W+ +ISG+A +G + L +F +M + G + TF+ +A A+ +K+G
Sbjct: 509 HKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQ 568
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE-EFVE 289
++ ++K Y I + A+I + G G + +A+ +F E
Sbjct: 569 IHARVIKTGYTSETEISN--ALISLYGKCGSIEDAKMDFFE 607
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI++Y K R AR+VF++L R+ SW ++SGYA NG G + + L+ +M ++G
Sbjct: 79 IGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSG 138
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY 259
P + +AC E + G ++ ++ K +
Sbjct: 139 VVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGF 174
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C + + GK++H L + D + L+++Y K + A ++FD +
Sbjct: 248 ASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDR 307
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+LM+ Y A +F +M G P+K T+ + C + G
Sbjct: 308 TNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLG 364
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 210/376 (55%), Gaps = 26/376 (6%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A F+++L + + S+ +GK++H + S +++V + L++MY KC + + A +V
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+++ RN SW+ +IS +A NG G + F +M ++G PD + L V AC+ V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
++G YF+ M YGI P +HY ++ +LG G EAE+ ++ MPFEP +W ++ N
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629
Query: 306 FAQIHGDVELEDRAEELL----------------------GDLDPSKAIVDKIPLPPRKK 343
+IH + L +RA E L G+ + + + + KK
Sbjct: 630 ACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKK 689
Query: 344 QSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
A + +E +++ + S D K+ L ++ GY PDT V+ D+DE+
Sbjct: 690 VPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQM 749
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
K ++L+YHSERLA+A+ LISTP P+ ++KNLR C DCH AIK++SKIV RE+ VRD
Sbjct: 750 KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTS 809
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF +G CSCGDYW
Sbjct: 810 RFHHFSEGVCSCGDYW 825
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH--ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F+++L NL S++MG+++H LL T+ + + + N L++MY KC A +F
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSI--LHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L +R SW +ISGY G GL LF +MR + D+ TF V A AS ++ G
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ I+++ G + + ++ + G + +A + E MP V W AL +
Sbjct: 472 KQLHAFIIRS--GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAH 528
Query: 308 QIHGDVE 314
+GD E
Sbjct: 529 ADNGDGE 535
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FS +L + L +G+++H L T+ F +D + N++++ Y K R +FD++
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ + S++++IS Y+ Q L F +M+ G F + + A+ +++ G
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+ N +I + K + AR +FD + R + +W +++ YA N + LF QM
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 221 RKTG--PHPDKETFLVVFAACASA 242
++ PD TF + C A
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDA 160
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD--VELNNKLIEMYGKCCNTRLARKVFD 187
F++LL C + +VH F + + ++N L++ Y + LA +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
++ +++ +++ +I+GY +G + + LF +MR++G P TF V A
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 211/371 (56%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C +L +E GK++H ++ D + LI+ YGKC +T +AR VF+ L
Sbjct: 382 LSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLL 441
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++ S + MI YA NG G + L LF M+ TG P+ T+L V +AC +A ++EG
Sbjct: 442 EVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCH 501
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +N I +HY ++ +LG AG L EAE + ++ V +W L + +IH
Sbjct: 502 IFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVV-IWRTLLSACRIH 560
Query: 311 GDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPR--KKQSATNM 349
GDVE+ R + DL P SK I K + KK A +
Sbjct: 561 GDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSW 620
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ + + + + D +R EK++ L +++E GYVPDTR+VL D+DEE K ++L
Sbjct: 621 VDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLY 680
Query: 406 YHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+A+ L S +RI+KNLR+CGDCH +K +SKIVGR++I RD KRFHHF
Sbjct: 681 YHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHF 740
Query: 465 RDGKCSCGDYW 475
R+G CSCGDYW
Sbjct: 741 RNGLCSCGDYW 751
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++SSL+ C +KSI ++ F L NKLI+ Y KC + ARKVFD++
Sbjct: 79 LYSSLIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVVYARKVFDEV 136
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ MI+ Y NG+ + + ++++M G PD+ TF VF A + V EG
Sbjct: 137 PHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 195
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L CGNL+ + G+ +H L+ + V L+ MY +C + KVF Q
Sbjct: 281 LSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFI 340
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
N +W +I G NG+ L+ F QM ++ P+ T V AC+S +++G
Sbjct: 341 NPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ 400
Query: 250 LYFEIMKNDYGIVPGIEHYI--AIIKVLGSAG 279
++ +MK +G+ I+ Y+ A+I G G
Sbjct: 401 IHAIVMK--FGL--DIDKYVGAALIDFYGKCG 428
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFV 160
S + G+ +EAI+ + D FSS+ + +L + G+R H + + V
Sbjct: 150 SYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV 209
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+V + + L++MY K R AR V DQ+ +++ + +I GY+ +G+ + L +F M
Sbjct: 210 SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM 269
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K G ++ T V C + E + G L
Sbjct: 270 TKKGIEANEYTLSSVLVCCGNLEDLTSGRL 299
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SL+ +C N +E G ++H + F +D +++ L++MYGKC + ++FD++
Sbjct: 381 TFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEI 440
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ +W+ ++ ++ +G G + + F M G P+ TF+ + C+ A V++G
Sbjct: 441 ENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGL 500
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M+ YG+VP EHY +I +LG AG L EAE+F+ MPFEP V W + +I
Sbjct: 501 NYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKI 560
Query: 310 HGDVELEDRAEELLGDLDP--SKAIVDKIPLPPRKKQ-----SATNMLEE--KNRVSDYR 360
HGD+E A + L L+P S A V + ++KQ S M+++ N++ Y
Sbjct: 561 HGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYS 620
Query: 361 STDLYRGE----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
D+ YEK+ L Q++ GYVP T VL D+D+ KEK L
Sbjct: 621 WVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLL 680
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSER+A+A+ L++ P MP+ + KNLR+C DCH+A+K +SK+ R +IVRD RFHHF
Sbjct: 681 HYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHF 740
Query: 465 RDGKCSCGDYW 475
+G CSCGDYW
Sbjct: 741 SNGSCSCGDYW 751
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L+ + K + GK++H +L + + L+N + +Y KC K+FD++ +RN
Sbjct: 81 LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN 140
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+ SW +I+G+A N + + L F QMR G + V AC S A++ G ++
Sbjct: 141 MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHC 200
Query: 253 EIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++K + G E ++ + + G L +A + E MP + V +W ++ + +
Sbjct: 201 LVVKCGF----GCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAV-LWTSMIDGFVKN 255
Query: 311 GDVE 314
GD +
Sbjct: 256 GDFK 259
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C +L +I+ G +VH L+ F ++ + + L +MY KC A K F+++
Sbjct: 179 LSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP 238
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ W MI G+ NG L + +M D+ +AC++ +A G
Sbjct: 239 CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFG 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S L +C LK+ GK +H + F + + N L +MY K + A VF Q+
Sbjct: 279 VLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVF-QI 337
Query: 190 RKRNLS--SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+S S +I GY Q L F +R+ G P++ TF + ACA+ ++
Sbjct: 338 HSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEH 397
Query: 248 GF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G L+ +++K ++ P + ++ + G G + + + + P W L
Sbjct: 398 GSQLHGQVVKFNFKRDPFVSS--TLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGV 454
Query: 307 AQIHG 311
HG
Sbjct: 455 FSQHG 459
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 227/407 (55%), Gaps = 29/407 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S + L++ GK+ EA+E + + D ++L + L +E G+ +H ++
Sbjct: 28 SWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQLCLLEHGQSIHSII 87
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ + + + L++MY KC +R +F+ + +R++S+W++MI G A++G G D L
Sbjct: 88 DSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMICGLASHGLGKDAL 147
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LFE+ G HP TF+ V AC+ A VKEG YF++M + YGI P +EHY ++ +
Sbjct: 148 TLFERFLNEGLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDL 207
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----K 330
LG AG + EA + +E M P +W + +IHG EL ++ L +LDP+
Sbjct: 208 LGRAGLVFEAIKVIESMAISPDPVLWAMVLCACRIHGLAELGEKIGNRLIELDPTYDGHY 267
Query: 331 AIVDKIPLPPRKKQSAT---NMLEEKN--RVSDYRSTDLYRG----------------EY 369
+ I RK + ++ E+N +V+ + + RG E
Sbjct: 268 VQLASIYANSRKWEDVVRVRRLMAERNTSKVAGWSLIE-ARGKVHRFVAGHREHEQSLEI 326
Query: 370 EKM-KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
+KM + + ++ AGYVP+ VLHDI EE KE A++ HSERLAIA+GL+ T P +RI
Sbjct: 327 QKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAFGLLVTGPGSCIRI 386
Query: 429 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+KNLR+C DCH K++S++ RE+IVRD RFHHF++GKCSC DYW
Sbjct: 387 VKNLRVCWDCHEVTKMISRVFEREIIVRDGSRFHHFKEGKCSCLDYW 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ +K+FD++ +R++ SW+ M+ Y NG+ + L F++MR++G PD+ T + + +A A
Sbjct: 13 VVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASA 72
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
++ G I+ + + I A++ + G + ++ E MP V W
Sbjct: 73 QLCLLEHGQSIHSII-DSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMP-RRDVSTW 130
Query: 301 EALRNFAQIHG 311
+ HG
Sbjct: 131 NVMICGLASHG 141
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 198/353 (56%), Gaps = 28/353 (7%)
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
+++L V + L L++MY KC AR VFD + +N+ SW+ MISGY+ +G
Sbjct: 480 YDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCS 539
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA 270
+ L+L+E+M K G +P++ TFL + +AC+ V+EG F M+ DY I EHY
Sbjct: 540 KEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 599
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS- 329
++ +LG AG L +A+EFVE+MP EP V W AL ++H D+++ A + L +LDP
Sbjct: 600 MVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQN 659
Query: 330 --------------------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE- 368
+ I + + KK + +E + + + + +
Sbjct: 660 PGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKT 719
Query: 369 ---YEKMKGLNGQMREAGYVPDTRYVLH---DIDEEAKEKALQYHSERLAIAYGLISTPP 422
Y ++ L Q + GY+PDT ++L DI EE +E+ L HSERLA++ GLIS P
Sbjct: 720 EEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPK 779
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ +R+ KNLRICGDCH A K +SKI GR +I RD RFHHF +GKCSCGDYW
Sbjct: 780 KSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L CG L+S + GK+VH L F D + N LI+MY KC + KVFD++
Sbjct: 177 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 236
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT--GPHPDKETFLVVFAACASAEAVKE 247
+RN +W+ +IS A G D L+LF +M+++ G PD+ TF + CA+ +
Sbjct: 237 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQ 296
Query: 248 GF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP-------------F 293
G ++ +++ + I I ++ + G L A+E RM +
Sbjct: 297 GRQIHAHLIRAN--ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 354
Query: 294 EPTVEVWEALRNFAQIH 310
+ E EALR F Q+
Sbjct: 355 QQNGETQEALRLFKQMQ 371
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++LL C N ++ G+++H L + K++ + +L+ MY +C A+++F+++
Sbjct: 280 TFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM 339
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RN SW+ MI GY NG+ + L LF+QM+ G PD + + ++C S ++G
Sbjct: 340 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 398
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-CNTRL--ARKVFD 187
+SSL+ C + S + GK +H + ++ + D L K++ +Y + C L ARK+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +RNL++W+ MI YA + +F++M K G PD TF C + +
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193
Query: 248 G 248
G
Sbjct: 194 G 194
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ +EA+ Q D FS S+L SC +L + G+ +H + + ++
Sbjct: 356 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 415
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
L L++MY KC + A KV+DQ K RN + W+ +++GYA G + F +M +
Sbjct: 416 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLE 475
Query: 223 TGPHPDKETFLVV-------------FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
+ D T + + ++ C A+ + F+ M N IV +
Sbjct: 476 SDIEYDVLTMVTIVNLLVLETALVDMYSKCG---AITKARTVFDNM-NGKNIVS----WN 527
Query: 270 AIIKVLGSAGHLIEAEEFVERMP-----------------FEPTVEVWEALRNFAQIHGD 312
A+I G EA E MP T V E LR F + D
Sbjct: 528 AMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQED 587
Query: 313 VELEDRAE------ELL---GDLDPSKAIVDKIPLPP 340
+E +AE +LL G L+ +K V+K+P+ P
Sbjct: 588 YNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEP 624
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 210/374 (56%), Gaps = 29/374 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + +C NL S +GK+VH L +++ V +NN L+ MY KC N AR+VFD +
Sbjct: 349 FVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N S + MI+GYA +G + L LFE M + P+ TF+ V +AC V+EG
Sbjct: 409 PEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQ 468
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK + I P EHY +I +LG AG L EAE +E MPF P W L +
Sbjct: 469 KYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRK 528
Query: 310 HGDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPR-------KKQSATN 348
HG+VEL +A +L ++ S A ++ R KK+ +
Sbjct: 529 HGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCS 588
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVL---HDIDEEAKE 401
+E +V + + D + + + M + +M++AGYVPD R+ L +++ + +E
Sbjct: 589 WIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERE 648
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+ L YHSE+LA+A+GLIST +P+ ++KNLRICGDCHNA+K++S + GRE+ VRD RF
Sbjct: 649 RRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRF 708
Query: 462 HHFRDGKCSCGDYW 475
H F++G CSC DYW
Sbjct: 709 HCFKEGHCSCRDYW 722
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 109 GKVREAIEYMG---QDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
G+ RE +E +G + D+F+ S+L + +K + G++ H ++ S F +
Sbjct: 219 GQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNS 278
Query: 164 ELNNKLIEMYGKCCNTRL-ARKVFDQLRKRNLSSWHLMISGYAA-NGQGADGLMLFEQMR 221
+ + LI++Y KC + + RKVF+++ +L W+ MISG++ DGL F +M+
Sbjct: 279 HVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQ 338
Query: 222 KTGPHPDKETFLVVFAACAS-----------AEAVKEGFLYFEIMKNDYGIVPGIEHYIA 270
+ G PD +F+ V +AC++ A A+K Y + N+ A
Sbjct: 339 RNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNN-----------A 387
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELED-RAEELLGDLD 327
++ + G++ +A + MP TV + + +AQ HG VE+E R EL+ + D
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQ-HG-VEVESLRLFELMLEKD 443
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 94 QLESLDVNLLSLCK------EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
QL++ NLL C GK+ A+ + ++ + F+ L CG+L + +
Sbjct: 8 QLQTFR-NLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+ + ++ N LI Y K +AR+VFD++ + ++ S++ +I+ YA
Sbjct: 67 FHLTQYPNVFSY-------NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADR 119
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
G+ L LFE++R+ D T V AC
Sbjct: 120 GECGPTLRLFEEVRELRLGLDGFTLSGVITACG 152
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 206/372 (55%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S L + NL S+ +GK++H + + V + L++MY C + + A +VF ++
Sbjct: 448 TFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEM 507
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN+ W+ +IS Y+ NG F M ++G +PD +FL V AC+ V++
Sbjct: 508 PDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKAL 567
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M Y + P +HY +I VL +G EAE + MPFEP +W ++ N +I
Sbjct: 568 WYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRI 627
Query: 310 HGDVELEDRAEELLGDLDP---SKAIVD---------------KIPLPPR----KKQSAT 347
H + +L +A + L +D + A V+ K+ R KK +A
Sbjct: 628 HKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAY 687
Query: 348 NMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E +RV + + D + E K+ L M + GY PDT L ++DEE K ++
Sbjct: 688 SWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIES 747
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSERLAIA+ LI+TP P+ I+KNLR C DCH AIK++SKIVGRE+ VRD+ RFHH
Sbjct: 748 LKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHH 807
Query: 464 FRDGKCSCGDYW 475
FRDG CSCGDYW
Sbjct: 808 FRDGSCSCGDYW 819
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L ++ MG++ H + V +V++ N L++MY KC A ++F L
Sbjct: 348 FATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
RN W +IS Y G + L +F++M + H D+ TF A A+ +V G
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ 467
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ +++ G++ + ++ + + G + +A E + MP + + W AL +
Sbjct: 468 LHSSVIR--LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISAYSQ 524
Query: 310 HGDVE 314
+GD E
Sbjct: 525 NGDAE 529
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASAS---AGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S +V + K G EA++ Q + +G+ F+++L + + G+++H L
Sbjct: 211 SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGF-TFAAMLGMSVGSEDVIFGQQIHGL 269
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+++V D+ + N L++ Y K LA+ +FD++ + + S++++I+GYA NGQ
Sbjct: 270 AIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKS 329
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
LF++++ G D++ F FA S A++
Sbjct: 330 FDLFKRLQ--GTSFDRKNF--PFATMLSVAAIE 358
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K N AR++F+ + RN SW +MI GY+ N Q + L+ +M ++G
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 227 PDKETFLVVFAACASAEAVKE 247
PD TF + + +KE
Sbjct: 141 PDHITFATLLSGFDDTTTLKE 161
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++LL + +++ ++H + F + + N L++ Y K C +A ++F ++
Sbjct: 145 TFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEM 204
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ S+++MI+GY G + L LF QMR P TF + +E V G
Sbjct: 205 PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFG 263
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 209/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S++D+CG L ++ G+ +H + SA DV L N ++ M+G+C + + F ++
Sbjct: 267 TFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEM 326
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ SW +MIS +A NG GA+ L F M G PD+ TF+ + + CA A +++
Sbjct: 327 LQRDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDAR 386
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ M DY +VPG++HY+ ++ +L +G L AEE VE MP+EP W L ++
Sbjct: 387 GHLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKM 446
Query: 310 HGDVELEDRAEELLGDLDPSK----AIVDKIPLPPR-----------------KKQSATN 348
GD++ R + DP A++ I + KKQ+ +
Sbjct: 447 QGDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCS 506
Query: 349 MLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +RV ++++ ++ +R ++ + +M EAG V DTR V +D++EE KE L
Sbjct: 507 YIEVHDRVHEFKAGEVSHPRHRDILYELMQIQRKMVEAGCVRDTRLVSYDLEEEEKENLL 566
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAI GL++T P LR++KNLR+C DCH AIK +S+I GR ++VRD RFHHF
Sbjct: 567 TYHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHF 626
Query: 465 RDGKCSCGDYW 475
DG CSC DYW
Sbjct: 627 EDGVCSCNDYW 637
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
L +L+LCK G D S+ + ++SLL C + +++++G+ +HE +
Sbjct: 36 LKATILNLCKNS---------GDDPSSKPDLETYASLLRQCASARALDLGQLLHEEIARR 86
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS-SWHLMISGYAANGQGADGLML 216
F L N LI MYG C + A+K FD++ RN + SW+ MI+GYA N + L L
Sbjct: 87 RFDGYTFLGNTLITMYGSCGDVDRAKKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKL 146
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKND 258
F+ M G P+K TF+ A + A+ EG ++ E++++D
Sbjct: 147 FKAMDLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHD 189
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC--CNT---RLARK 184
F S LD+ GNL ++ G +HE + D + LI +GKC C + +
Sbjct: 161 TFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQA 220
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+FD++R R+ SW ++ YA + Q + LF++M G P + TF+ V AC A
Sbjct: 221 IFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSA 280
Query: 245 VKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
++EG L+ IM + +++ I+ + G G + E+ + M
Sbjct: 281 LREGRVLHSSIMNSALKWDVVLQN--GIVNMFGRCGSVEESSSAFQEM 326
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 200/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L C L + GK +H + DV + N LIEMY KC + R + +VF ++ +
Sbjct: 581 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 640
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W +IS G+G + F +M G PD F+ + AC+ + V+EG YF
Sbjct: 641 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 700
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
MK DY I P IEHY ++ +L + L +AE+F+ MP +P +W AL + ++ GD
Sbjct: 701 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGD 760
Query: 313 VELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
E+ R E LG D ++I I KK + +E
Sbjct: 761 TEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWME 820
Query: 352 EKNRVSDYRSTDLYRGEYE---KMKG-LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+N+V + + + ++E K+ G L G M + GY+ + ++VLHDIDE+ K L H
Sbjct: 821 IQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGH 880
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GL++T P PL+++KNLR+C DCH K +SKI REL+VRD RFH F+DG
Sbjct: 881 SERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDG 940
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 941 ACSCGDYW 948
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S++++C L EM K +H+ + F D+ + N LI+MY + + ARKVF+++
Sbjct: 177 FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 236
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ SW+ +ISGY ANG + L ++ + R G PD T V AC +V+EG
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +CG L S+E G +H L+ KDV +NN L+ MY K R++FD++
Sbjct: 279 SSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL 338
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+ SW+ MI GY+ G + + LF +M PD T + AC G L
Sbjct: 339 RDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHL-----GDLE 392
Query: 252 FEIMKNDYGIVPGIEHYIA----IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
F +DY I G E +I + G+L+ ++E M + +V W ++ N
Sbjct: 393 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS-WNSMIN 449
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +CG+L +E GK VH+ + TS + D +N LI MY KC N +++VF ++
Sbjct: 379 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 438
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
++ SW+ MI+ Y NG + + LF+ M KT PD T++++ +
Sbjct: 439 KDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLS 483
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 15/181 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+FSS+ + + + ++H L+ T V + KLI Y + + VF
Sbjct: 74 LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 133
Query: 190 R-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+ +I NG ++ L L+ + ++ PD TF V ACA G
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------G 186
Query: 249 FLYFEIMKNDYGIVP----GIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
L FE+ K+ + V G + YI A+I + L +A + E MP V W +
Sbjct: 187 LLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-WNS 245
Query: 303 L 303
L
Sbjct: 246 L 246
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 212/369 (57%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++LD+C +L +++ G+++H + + F ++ + LI MYGKC A VF+++ KR
Sbjct: 413 AVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKR 472
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ M+ YA +G + L LF QM+ G D +F+ V +A + + +V +G+ YF
Sbjct: 473 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYF 532
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP-FEPTVEVWEALRNFAQIHG 311
M D+ I P E Y ++ +LG AG + EA + V ++ P +W L + H
Sbjct: 533 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 592
Query: 312 DVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATNML 350
+ A E + + DPS + V+++ R KK+ + +
Sbjct: 593 KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 652
Query: 351 EEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E NRV ++ RS Y ++ LN +MR AGY+PDT+ +LHD+++E KE L Y
Sbjct: 653 EILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFY 712
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAIA+GLISTPP PLR+IKNLR+C DCH A K +SK+ GRE++VRD RFH+F+D
Sbjct: 713 HSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKD 772
Query: 467 GKCSCGDYW 475
G+CSC DYW
Sbjct: 773 GRCSCKDYW 781
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 113 EAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EA+ G Q A F +L+ +L S+ GK +HEL++ + + +D + L+
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+YG+C A K+F + +++ +W +M YA NG + L LF++M+ G P
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 231 TFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
T + V CA A+++G ++ I++N + + +E A+I + G G + EA E
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFE 467
Query: 290 RMPFEPTVEVWEALRNFAQIHG 311
+M + + VW ++ HG
Sbjct: 468 KMA-KRDILVWNSMLGAYAQHG 488
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 8/267 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +LL C + K+++ G+RVH +R F ++ + LI+MY +C + A++VF+ L
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
++++ +W MI Y G L +F QM++ P K T++ + ACAS E++K+G
Sbjct: 67 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +I++ G + A+I + G + A + +R+ V W A+
Sbjct: 127 IHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAMIAACVQ 183
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPL-PPRKKQSATNMLEEKNRVSDYRSTDLYRGE 368
H L A L + + +KI L N L E V S+ + +
Sbjct: 184 HDQFAL---ARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 369 YEKMKGLNGQMREAGYVPDTRYVLHDI 395
M AG + D R + D+
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDM 267
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 106 CKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C++G A+ Y Q+ + ++L++C + +S++ G +H + F DV
Sbjct: 81 CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 140
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ LI MY KC + R A F +L R++ SW MI+ + Q A L+ +M+
Sbjct: 141 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 200
Query: 224 GPHPDKETFLVVFAACASAEAVKEG-FLY----FEIMKNDYGIVPGIEHYIAIIKVLGSA 278
G P+K T VF A + EG F+Y +M++D ++ + + + G+A
Sbjct: 201 GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMN------SAVNMFGNA 254
Query: 279 GHLIEAEEFVERMPFEPTVEVW--------------EALRNFAQIHGD 312
G L +A E M + V W EA+R F ++ D
Sbjct: 255 GLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 66/124 (53%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ ++ G+ + GK V+ L+ + DV + N + M+G AR++F+ + R
Sbjct: 211 TVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDR 270
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+++I+ Y N + + LF ++++ G + TF+++ S ++ +G +
Sbjct: 271 DVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIH 330
Query: 253 EIMK 256
E++K
Sbjct: 331 ELVK 334
>gi|302804238|ref|XP_002983871.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
gi|300148223|gb|EFJ14883.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
Length = 481
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 214/396 (54%), Gaps = 28/396 (7%)
Query: 108 EGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
E K +EAIE + Q ++ V + +L +C NL + G+ H D +
Sbjct: 86 EKKPKEAIELYHALQQSNLPVTNTVLAIVLGACSNLVDSDEGRAAHYTAIELGLQDDPVV 145
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLS--SWHLMISGYAANGQGADGLMLFEQMRKT 223
N + MY KC AR VFD + RN+ +W +I Y + G+ + L L +M+
Sbjct: 146 QNAVATMYAKCGGLEEARAVFDAMEIRNVDALTWSSLIGVYGSQGKTDESLRLARRMQHE 205
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G D F + +CA+ E +F M++DYGIVPG EH+ ++ +G AGHL +
Sbjct: 206 GMILDGNCFANLIFSCANGRQDAEACRFFMDMRSDYGIVPGKEHFGCLVDAVGRAGHLKD 265
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------- 328
AE+ ++ MP +P VW L AQ+HGD + R+ E++ ++P
Sbjct: 266 AEDLIKAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIMMKMNPQLDPLGTGANRTAAR 325
Query: 329 ---SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM-----R 380
++ + + + KK+ +M+ N V + + D +++ ++ +
Sbjct: 326 WEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRSHIHTKEIYAEVDRITEICKK 385
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
E Y+PDTRYVLHD+ E+ K K L YHSERLA+AYG I+TPP LR+IKNLR+CGDCH
Sbjct: 386 EENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIATPPGSALRVIKNLRVCGDCHT 445
Query: 441 AIKIMSKIVGRELIVRDNKRFHHF-RDGKCSCGDYW 475
K+ +KI+ RE+IVRDN+RFHHF +DG CSCGDYW
Sbjct: 446 ISKMWAKIMQREIIVRDNRRFHHFAKDGTCSCGDYW 481
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 208/373 (55%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L++C +L + K +H + S +V + N LI MY +C + A ++F
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ + SW M++ ++ G+ A+ L LF++M G PD T+ + C ++++G+
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M +G+ P +H+ A++ +LG +G L +A+E +E MPFEP W +I
Sbjct: 566 RYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRI 625
Query: 310 HGDVELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATN 348
HG +EL + A E + +LDPS ++ K+ KK +
Sbjct: 626 HGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLS 685
Query: 349 MLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E ++ ++ S Y E++ L+G MR AGYVPDT+ VLHD+ E KE L
Sbjct: 686 FIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETML 745
Query: 405 QYHSERLAIAYGLIST-PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
YHSE++AIA+GL+S+ P+R++KNLR+C DCH A K +++I GR++I+RD RFH
Sbjct: 746 LYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHR 805
Query: 464 F-RDGKCSCGDYW 475
F DGKCSCGDYW
Sbjct: 806 FSSDGKCSCGDYW 818
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L SC + + G+ +HE +R S F +D + N LI MYGKC + AR VF+ +
Sbjct: 9 TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 190 --RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R+RN+ SW+ MI+ YA NG + L+L+ +M G D TF+ V AC+S
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+++H + + F D+ + LI MYGKC ++ AR+VFD+++KR++ SW++MI Y
Sbjct: 226 GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQ 285
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
NG + L L++++ G K TF+ + AC+S +A+ +G ++ I++ G+ +
Sbjct: 286 NGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER--GLDSEV 343
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ + G L EA + M V W L
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAV-AWSTL 380
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +C ++K++ G+ VH + +V + L+ MY KC + ARKVF+ +
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 190 RKRNLSSWHLMISGYAANGQGAD----------------------------------GLM 215
+ R+ +W +I YA+NG G D +
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMK 429
Query: 216 LFEQMR-KTGPHPDKETFLVVFAACASAEAVKE-GFLYFEIMKNDYGIVPGIEHYIAIIK 273
+F +M G PD TF+ V ACAS + E L+ +I +++ + + +I
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESE--LESNVVVTNTLIN 487
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRAEELLGDLDPSK 330
+ G L EAE E TV W A+ F+Q E D +E+ DL+ K
Sbjct: 488 MYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGRYAEALDLFQEM--DLEGVK 542
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +C S+ G+ +H + S L N L+ MY + + A+++F L
Sbjct: 112 TFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL 168
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ R+ +SW+ +I ++ +G + L +F++M K P+ T++ V + ++ E + EG
Sbjct: 169 QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGR 227
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ EI+ N G + A+I + G G EA E ++M V W +
Sbjct: 228 KIHAEIVAN--GFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS-WNVMIGCYV 284
Query: 309 IHGDVELEDRAEELLGDLD 327
+GD A EL LD
Sbjct: 285 QNGDFH---EALELYQKLD 300
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 211/370 (57%), Gaps = 28/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L SC L ++ GK +H + DV + + L++MY KC +++RKVFDQ+ R
Sbjct: 518 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR 577
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W++++ Y +G D + + M G P++ TF+ VFAAC+ + V EG F
Sbjct: 578 NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIF 637
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP--FEPTVEVWEALRNFAQIH 310
MK DYG+ P +HY ++ +LG AG + EA + + +P F+ W +L +IH
Sbjct: 638 YNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKA-GAWSSLLGACRIH 696
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
++E+ + A + L L+P+ A + + +K+ +
Sbjct: 697 NNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSW 756
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + + D + EK++G L +MR+ GY+PDT VLH+++E+ KE L
Sbjct: 757 IEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLC 816
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIA+G+++T P +R+ KNLR+C DCH A K +SK+V RE+I+RD +RFHHF+
Sbjct: 817 GHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFK 876
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 877 NGTCSCGDYW 886
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHE 152
L + + L SLC+ + EA+EY+ + D F SS+L +C +L+ + GK +H
Sbjct: 263 LVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHA 322
Query: 153 L-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
L+ + ++ + + L++MY C +VFD + R + W+ MI+GYA N
Sbjct: 323 YALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDE 382
Query: 212 DGLMLFEQMRKT-GPHPDKETFLVVFAACASAEA 244
+ L+LF +M ++ G + T V AC + A
Sbjct: 383 EALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +LL + +L+ +++GK++H + + V V + N L+ +Y KC + KVFD++
Sbjct: 96 FPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 155
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN SW+ +IS + + L F M P T + V AC++ + EG
Sbjct: 156 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNF-PMPEGL 214
Query: 250 L 250
L
Sbjct: 215 L 215
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M + A A + ++ +C + + +H + +D + N L++MY +
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-----------KTGPH 226
+A+++F ++ R+L +W+ +I+GY + + D L++ +M+ +
Sbjct: 451 KIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLK 510
Query: 227 PDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T + + +CA+ A+ +G ++ +KN+ + A++ + G L +
Sbjct: 511 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMYAKCGCLQMSR 568
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGD 312
+ +++P + W + +HG+
Sbjct: 569 KVFDQIPIRNVI-TWNVIVMAYGMHGN 594
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 90 RGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNL---KSIEM 146
R SL +L S K EA M + + + + S L +C N + + M
Sbjct: 158 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVAL-ACSNFPMPEGLLM 216
Query: 147 GKRVHELLRTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
GK+VH + ++ ELN N L+ MYGK ++ + R+L +W+ ++S
Sbjct: 217 GKQVH-----AYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLS 271
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N Q + L +M G PD T V AC+ E ++ G
Sbjct: 272 SLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTG 317
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 207/381 (54%), Gaps = 25/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A V S++ SC +L ++E+G+R H+ + + ++ L L++MY +C +
Sbjct: 243 QSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSI 302
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A VF+ L +R+ SW +I+G A +G L F M + G P TF V +AC
Sbjct: 303 DKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSAC 362
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ V+ GF FE MK D+ + P +EHY ++ +LG AG L EAE FV +MP +P V
Sbjct: 363 SHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPV 422
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM------ 349
W AL +IH + E+ +R ++L L P + ++ I ++ + T M
Sbjct: 423 WGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKA 482
Query: 350 -----------LEEKNRVSDYRSTDLYRGEYEKMKGLNGQ----MREAGYVPDTRYVLHD 394
+E RV + D E +K++ + + +R AGY +T L D
Sbjct: 483 KGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFD 542
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
IDEE KE AL HSE+LAIA+G++ + P+RI+KNLR+C DCH A K++SK+ GRELI
Sbjct: 543 IDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELI 602
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFHHFR G CSC DYW
Sbjct: 603 VRDRNRFHHFRQGLCSCMDYW 623
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 35/213 (16%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG---------------- 174
F L+ SC L I MG + H + F KDV + N L+ MY
Sbjct: 122 FPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMY 181
Query: 175 ---------------KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
KC + ARK+FDQ+ ++NL +W MISGYA N + LF+
Sbjct: 182 YVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKV 241
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE-IMKNDYGIVPGIEHYIAIIKVLGSA 278
++ G ++ + V ++CA A++ G + ++KN G+ + A++ +
Sbjct: 242 LQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKN--GMTLNLILGTALVDMYARC 299
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + +A E +P T+ W AL +HG
Sbjct: 300 GSIDKAVWVFEDLPERDTLS-WTALIAGLAMHG 331
>gi|302792230|ref|XP_002977881.1| hypothetical protein SELMODRAFT_107359 [Selaginella moellendorffii]
gi|300154584|gb|EFJ21219.1| hypothetical protein SELMODRAFT_107359 [Selaginella moellendorffii]
Length = 464
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 208/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S +D+CG L ++ G+ +H + SA D+ L N ++ M+G+C + + F ++
Sbjct: 95 FMSAVDACGKLSALREGRVLHSSIMNSALKWDIVLQNGIVNMFGRCGSVEESSSAFQEML 154
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+ SW +MIS +A NG G + L F M G PD+ TF+ + + CA A +++
Sbjct: 155 QRDAVSWSIMISAFAHNGHGTEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARG 214
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ M DY +VPG++HY+ ++ +L +G L AEE VE MP+EP W L ++
Sbjct: 215 HLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQ 274
Query: 311 GDVELEDRAEELLGDLDPSK----AIVDKIPLPPR-----------------KKQSATNM 349
GD++ R + DP A++ I + KKQ+ +
Sbjct: 275 GDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSY 334
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +RV ++++ ++ +R ++ + +M EAGYV DTR V +D++EE KE L
Sbjct: 335 IEVHDRVHEFKAGEVSHPRHRDILYELMQIQRKMVEAGYVRDTRLVSYDLEEEEKENLLT 394
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAI GL++T P LR++KNLR+C DCH AIK +S+I GR ++VRD RFHHF
Sbjct: 395 YHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFE 454
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 455 DGVCSCNDYW 464
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ Y + + + +FD++R R+ SW ++ YA + Q + LF++M G
Sbjct: 30 NVLMAAYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYK 89
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P + TF+ AC A++EG L+ IM + + I I+ + G G + E+
Sbjct: 90 PTRFTFMSAVDACGKLSALREGRVLHSSIMNS--ALKWDIVLQNGIVNMFGRCGSVEESS 147
Query: 286 EFVERMPFEPTVEVWEALRNFAQI-HGDVELE 316
+ M V + FA HG LE
Sbjct: 148 SAFQEMLQRDAVSWSIMISAFAHNGHGTEALE 179
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 212/373 (56%), Gaps = 28/373 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ-- 188
+S L +C NL +++ G+ +H ++ + + L LI+MY KC A K+F+
Sbjct: 237 LASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNP 296
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
KR + W+ MI G+A +G+ + + +FEQM+ P+K TF+ + AC+ V+EG
Sbjct: 297 RLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEG 356
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YFE M + Y + P +EHY ++ +LG AG L EAEE + M P V +W AL + +
Sbjct: 357 RYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACK 416
Query: 309 IHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSAT 347
IH D E+ +R +++ +LDP ++ + +KI +KK
Sbjct: 417 IHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGC 476
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDE-EAKEK 402
+ +E + RS + Y + + +++ AGY+P++ VL DID+ E +E
Sbjct: 477 SSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRET 536
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
AL HSE+LAIA+GL++T P+ P+RI+KNLR+C DCH AIK +SK+ RE+IVRD R+H
Sbjct: 537 ALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYH 596
Query: 463 HFRDGKCSCGDYW 475
HF+DG CSC DYW
Sbjct: 597 HFKDGTCSCNDYW 609
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N ++ Y + AR++FD++ ++++ SW MISG G + L +F M
Sbjct: 166 RDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNM 225
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIA-IIKVLGSA 278
G P++ T AACA+ A+ +G +++ I KN+ + E +A +I +
Sbjct: 226 LAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNN---IQMNERLLAGLIDMYAKC 282
Query: 279 GHLIEAEEFVERMP-FEPTVEVWEALRNFAQIHG 311
G L A + P + V W A+ +HG
Sbjct: 283 GELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHG 316
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Query: 131 FSSLLDSCGNLKSIEMGK--RVHEL---LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F+ CG+ + G+ RVH + L + FV N LI MY ARKV
Sbjct: 105 FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFV-----TNALIGMYVNLDFVVDARKV 159
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD R++ SW++M+SGYA G+ + LF++M P D ++ + + C
Sbjct: 160 FDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEM----PEKDVVSWTTMISGCLQVGYF 215
Query: 246 KEGFLYFEIM 255
E F M
Sbjct: 216 MEALDIFHNM 225
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 209/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++E+GK + + K VE++N LI+M+ KC + A K+F + ++
Sbjct: 239 SMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEK 298
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ SW +I G A +G+G + LFE+M +G PD F+ + +AC+ + V+ G YF
Sbjct: 299 TIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYF 358
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M Y +VP IEHY ++ + G + EA EFV MP EP + L + + HG+
Sbjct: 359 GSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGE 418
Query: 313 VELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNMLE 351
+L ++ +LL +P I + + + KK + M+E
Sbjct: 419 FKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIE 478
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + ++ + D ++ YE + + +M+++GY P T VL DI+EE KE +L H
Sbjct: 479 IDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRH 538
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL+ TPP P+RI+KNLR+C DCH+A K +SKI RE+I+RD RFHHF+ G
Sbjct: 539 SEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSG 598
Query: 468 KCSCGDYW 475
+CSCGD+W
Sbjct: 599 QCSCGDFW 606
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRK 191
+L +C L+ + +G+ VH + F D+ + N ++ MY CC + ARKVFD++ K
Sbjct: 138 VLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYS-CCAGGINSARKVFDEMPK 196
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ +W MI GYA G+ + + LF +M+ PD+ T + + +AC A++ G +
Sbjct: 197 SDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELG-KW 255
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
E + I +E A+I + G + +A + M E T+ W ++ +HG
Sbjct: 256 IEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMN-EKTIVSWTSVIVGMAMHG 314
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 201/369 (54%), Gaps = 23/369 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S++L +C L + GK VH L+ + DV L N L+ MY +C + VF +
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R ++L SW +I+ YA +G GL F ++ + G D T + +AC+ +KEG
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGV 487
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M D+G+ P H++ ++ +L AG L AE + MPF P W +L + ++
Sbjct: 488 QSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKL 547
Query: 310 HGDV-----------ELEDRAEE----LLGDLDPSKAIVDKIPLPPRKKQSATN----ML 350
H D ELE E LL ++ D + ++ + N +
Sbjct: 548 HNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAARKNPGCSYI 607
Query: 351 EEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + V ++ + D E E ++K L+ QM++AGYVPD R VLH++ EE KE+ L Y
Sbjct: 608 EINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCY 667
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIAYGLISTPP PL I+KNLR C DCH A K +S+IVGR+++VRD+ RFHHF +
Sbjct: 668 HSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFEN 727
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 728 GSCSCKDYW 736
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS L +C + I G+ + S + D + N LI MY KC + ARKVFD+L
Sbjct: 165 TFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R++ +W+ MISGYA G L LF++M P P+ TF+ + AC + E +++G
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG 283
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 1/120 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQ 188
F LL +C NL+ +E G+ +H ++ + D+ + N L+ MY KC ++ AR+VF++
Sbjct: 266 TFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
LR R++ +W+++I Y GQ D L +F+QM+ P++ T V +ACA A ++G
Sbjct: 326 LRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFV 160
+ + G REA+ Y + D +F + C + K ++ G+ +H + L T
Sbjct: 32 AFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLE 91
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
D+ L LI MY +C + LARK FD++ K+ L +W+ +I+GY+ NG L +++ M
Sbjct: 92 FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151
Query: 221 RKTGPH---PDKETFLVVFAACASAEAVKEG 248
P PD TF AC+ + +G
Sbjct: 152 VSKSPEGMKPDAITFSSALYACSVVGDISQG 182
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MYGKC + A VF + N SW L+++ +A NG + L + +M G PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 232 FLVVFAACASAEAVKEG-FLYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
F+V C+S++ +K+G L+ I++ ++ I+ G A+I + L A +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILG----TALITMYARCRDLELARKT 116
Query: 288 VERMPFEPTVEVWEAL 303
+ M + T+ W AL
Sbjct: 117 FDEMG-KKTLVTWNAL 131
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S L+SC L++++ G+ +H DV + N LI MY +C N +F ++
Sbjct: 291 FTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS 350
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+N+ SW+ +I G A +G G L F QM ++ PD+ TF + +AC+ + ++G
Sbjct: 351 KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRC 410
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ + ++HY ++ +LG +G L EAEE + MP + VW L + +H
Sbjct: 411 LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470
Query: 311 GDVELEDRAEELLGDLDP--SKAIV---------------DKIPLPPRK----KQSATNM 349
+E+ +RA + + DL+P S A V +I ++ KQ +
Sbjct: 471 SKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSW 530
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ K +++ S D Y+K++ L G+++E GYVPD R+ LHD+++E KE L
Sbjct: 531 ITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLS 590
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAI +GLIST + ++KNLR+CGDCH+AIK+++KIV R++IVRD+ RFHHF
Sbjct: 591 YHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFM 650
Query: 466 DGKCSCGDYW 475
DG+CSCGDYW
Sbjct: 651 DGRCSCGDYW 660
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+D+ N +I YG CCN R+ ++F ++ RN+ SW MI G +G+ + L LF
Sbjct: 117 RDIAAWNSMI--YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 174
Query: 219 QMRKTGPH--PDKETFLVVFAACASAEAVKEG 248
QM G P T+ V ACA+A A+ +G
Sbjct: 175 QMMGCGVEVKPTSSTYCCVITACANASALYQG 206
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 107 KEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
+ G+ EA+ + MG + ++ +C N ++ G ++H + + D
Sbjct: 162 QHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFD 221
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
++ LI Y C + +VF N+ W +++GY N + D L +F +M +
Sbjct: 222 AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMR 281
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
G P++ +F +C EA+ G
Sbjct: 282 EGVLPNQSSFTSALNSCCGLEALDWG 307
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 206/407 (50%), Gaps = 61/407 (14%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS+L ++ GK +H + + DV + + LI+MY KC + +VF L
Sbjct: 238 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 297
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM----------------------------- 220
+ + SW+ +I+G NG +GL F+QM
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357
Query: 221 -------RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
R G P+ F+ V AC+ A V E + YF M DY I+PG+EHY A+
Sbjct: 358 QLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 417
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--A 331
+LG G L EA EF+ M EPT VW L ++H ++EL ++ + L +DP A
Sbjct: 418 LLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGA 477
Query: 332 IV---------------DKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEY--- 369
V K+ + R KK+ A + +E KN+V + + D Y
Sbjct: 478 YVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRI 537
Query: 370 -EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
E +K L QM GYV DT VLHD++EE K L HSERLAI +G+ISTP +R+
Sbjct: 538 NEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRV 597
Query: 429 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+C DCH A K +SKIVGRE++VRDN RFHHF+DGKCSCGD+W
Sbjct: 598 TKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 32/142 (22%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA----- 182
++VF S+L SC +K + G+ VH + D+ N L+ MY K +
Sbjct: 106 HNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKK 165
Query: 183 ------------------------RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
RKVF+ + KR++ SW+ +ISG A NG D LM+
Sbjct: 166 VFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVR 225
Query: 219 QMRKTGPHPDKETF---LVVFA 237
+M PD T L +FA
Sbjct: 226 EMGNADLRPDSFTLSSVLPIFA 247
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S L+SC L++++ G+ +H DV + N LI MY +C N +F ++
Sbjct: 307 FTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS 366
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+N+ SW+ +I G A +G G L F QM ++ PD+ TF + +AC+ + ++G
Sbjct: 367 KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRC 426
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ + ++HY ++ +LG +G L EAEE + MP + VW L + +H
Sbjct: 427 LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486
Query: 311 GDVELEDRAEELLGDLDP--SKAIV---------------DKIPLPPRK----KQSATNM 349
+E+ +RA + + DL+P S A V +I ++ KQ +
Sbjct: 487 SKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSW 546
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ K +++ S D Y+K++ L G+++E GYVPD R+ LHD+++E KE L
Sbjct: 547 ITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLS 606
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAI +GLIST + ++KNLR+CGDCH+AIK+++KIV R++IVRD+ RFHHF
Sbjct: 607 YHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFM 666
Query: 466 DGKCSCGDYW 475
DG+CSCGDYW
Sbjct: 667 DGRCSCGDYW 676
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+D+ N +I YG CCN R+ ++F ++ RN+ SW MI G +G+ + L LF
Sbjct: 133 RDIAAWNSMI--YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190
Query: 219 QMRKTGPH--PDKETFLVVFAACASAEAVKEG 248
QM G P T+ V ACA+A A+ +G
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQG 222
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 107 KEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
+ G+ EA+ + MG + ++ +C N ++ G ++H + + D
Sbjct: 178 QHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFD 237
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
++ LI Y C + +VF N+ W +++GY N + D L +F +M +
Sbjct: 238 AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMR 297
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
G P++ +F +C EA+ G
Sbjct: 298 EGVLPNQSSFTSALNSCCGLEALDWG 323
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 212/373 (56%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C NL + G++VH L+ F V ++N LI+MY KC + A+ +F ++
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R R++ SW +I G A +GQ L L++ M G P++ TF+ + AC+ V++G
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M DYGI P ++HY ++ +LG +G L EAE + MPF P W AL + +
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419
Query: 310 HGDVELEDR-AEELLGDL---DPSKAIV-----DKIPLPPRKKQSATNMLEEKNR----- 355
G ++ R A+ L+ DPS I+ L + ++ + E + R
Sbjct: 420 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGH 479
Query: 356 --VSDYRSTDL-YRGE---------YEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEK 402
V + T++ Y GE + +K L +MR GYVPDT ++LHD+DE+ KEK
Sbjct: 480 SSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEK 539
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSER A+AYGL+ P P+RI+KNLR+CGDCH +K +S+I RE+IVRD R+H
Sbjct: 540 LLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYH 599
Query: 463 HFRDGKCSCGDYW 475
HF+ GKCSC D+W
Sbjct: 600 HFKGGKCSCNDFW 612
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFS+L+ +C NL SI+ G++VH S + D + + L++MY KC A+ VFD +
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLF 217
R +N SW M+SGYA +G+ + L LF
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELF 194
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L C +++ K +H + V+ L N L+ +YGKC A +VFD++ R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 195 SSWHLMISGY-AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+W +++ AN G + +G PD F + ACA+ ++ G
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 201/369 (54%), Gaps = 23/369 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S++L +C L + GK VH L+ + DV L N L+ MY +C + VF +
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R ++L SW +I+ YA +G GL F ++ + G D T + +AC+ +KEG
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGV 487
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M D+G+ P H++ ++ +L AG L AE + MPF P W +L + ++
Sbjct: 488 QTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKL 547
Query: 310 HGDV-----------ELEDRAEE----LLGDLDPSKAIVDKIPLPPRKKQSATN----ML 350
H D ELE E LL ++ D + ++ + N +
Sbjct: 548 HNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAARKNPGCSYI 607
Query: 351 EEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + V ++ + D E E ++K L+ QM++AGYVPD R VLH++ EE KE+ L Y
Sbjct: 608 EINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCY 667
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIAYGLISTPP PL I+KNLR C DCH A K +S+IVGR+++VRD+ RFHHF +
Sbjct: 668 HSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFEN 727
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 728 GSCSCKDYW 736
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS L +C + I G+ + S + D + N LI MY KC + ARKVFD+L
Sbjct: 165 TFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ R++ +W+ MISGYA G L LF++M P P+ TF+ + AC + E +++G
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVL-----GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ D G E + I VL + L EA + ERM + W L
Sbjct: 285 AIHRKVRED-----GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVI-TWNIL 337
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 1/120 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQ 188
F LL +C NL+ +E G+ +H +R + D+ + N L+ MY KC ++ AR+VF++
Sbjct: 266 TFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R R++ +W+++I Y GQ D L +F+QM+ P++ T V +ACA A ++G
Sbjct: 326 MRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFV 160
+ + G REA+ Y + D +F + C + K ++ G+ +H + L T
Sbjct: 32 AFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLE 91
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
D+ L LI MY +C + LARK FD++ K+ L +W+ +I+GY+ NG L +++ M
Sbjct: 92 FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151
Query: 221 RKTGPH---PDKETFLVVFAACASAEAVKEG 248
P PD TF AC + +G
Sbjct: 152 VSKSPEGMKPDAITFSSALYACTVVGDISQG 182
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MYGKC + A VF + N SW L+++ +A NG + L + +M G PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 232 FLVVFAACASAEAVKEG-FLYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
F+V C+S++ +K+G L+ I++ ++ I+ G A+I + L A +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILG----TALITMYARCRDLELARKT 116
Query: 288 VERMPFEPTVEVWEAL 303
+ M + T+ W AL
Sbjct: 117 FDEMG-KKTLVTWNAL 131
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 208/375 (55%), Gaps = 32/375 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C L ++ GK +H DV + + L++MY KC LA +VFDQ+ R
Sbjct: 761 TVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR 820
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGP------HPDKETFLVVFAACASAEAVK 246
N+ +W+++I Y +G+G + L LF M G P++ T++ +FAAC+ + V
Sbjct: 821 NVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVD 880
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT-VEVWEALRN 305
EG F MK +G+ P +HY ++ +LG +G + EA E + MP V+ W +L
Sbjct: 881 EGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLG 940
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQ 344
+IH VE + A + L L+P+ A + K+ +K+
Sbjct: 941 ACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKE 1000
Query: 345 SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ +E + V + S D + +E ++ L+ +MR+ GYVPD VLH++D+E K
Sbjct: 1001 PGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEK 1060
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E L HSERLAIA+GL++TPP +R+ KNLR+C DCH A KI+SKIV RE+I+RD +R
Sbjct: 1061 ETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRR 1120
Query: 461 FHHFRDGKCSCGDYW 475
FHHF +G CSCGDYW
Sbjct: 1121 FHHFANGTCSCGDYW 1135
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 95 LESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
L S + + SL + + EA+ Y M D G +S+L +C L+ + +G+ +H
Sbjct: 499 LVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGV-TLASVLPACSQLERLRIGREIH 557
Query: 152 -ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
LR +++ + L++MY C + R VFD + +R ++ W+ +++GYA N
Sbjct: 558 CYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFD 617
Query: 211 ADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAV--KEGFLYFEIMKNDYG 260
L LF E + ++ P+ TF V AC + KEG ++ I+K +G
Sbjct: 618 DQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG-IHGYIVKRGFG 669
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+L +C K + +H + F KD + N L++MY + +++ +F ++
Sbjct: 640 FASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN 699
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGP-----------------HPDKETF 232
KR++ SW+ MI+G G+ D L L +M R+ G P+ T
Sbjct: 700 KRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTL 759
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ V CA+ A+ +G ++ +K + + A++ + G L A ++M
Sbjct: 760 MTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGS--ALVDMYAKCGCLNLASRVFDQM 817
Query: 292 PFEPTVEVWEALRNFAQIHGDVE 314
P V W L +HG E
Sbjct: 818 PIR-NVITWNVLIMAYGMHGKGE 839
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFV--KDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F ++L + + + +GK++H + V + N L+ MYGKC + AR+VFD
Sbjct: 333 FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD 392
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ R+ SW+ MI+ + L LF M P T + V AC+
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACS 444
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 133 SLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+ +C +++ + +GK+VH + ++ NN L+ MY + A+ +F
Sbjct: 438 SVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYT-NNALVTMYARLGRVNDAKALFGVFDG 496
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++L SW+ +IS + N + + LM M G PD T V AC+ E ++ G
Sbjct: 497 KDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIG 553
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 212/361 (58%), Gaps = 18/361 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C L ++ GK +H KDV + + L++MY KC L+R VF+Q+ R
Sbjct: 514 TVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR 573
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH-----PDKETFLVVFAACASAEAVKE 247
N+ +W+++I Y +G+G + L LF +M + G + P++ T++ +FA+ + + V E
Sbjct: 574 NVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDE 633
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEVWEALRNF 306
G F MK +GI P +HY ++ +LG +G + EA ++ MP V+ W +L
Sbjct: 634 GLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693
Query: 307 AQIHGDVELEDRAEELLGDLDPS--------KAIVDKIPLPPRKKQSATNMLEEKNRVSD 358
+IH ++E+ + A + L LDP+ + K+ +K+ + +E + V
Sbjct: 694 CKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSMLGRKMKEKGVRKEPGCSWIEHGDEVHK 753
Query: 359 YRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIA 414
+ + D+ + +E ++ L+ +M++ GYVPDT VLH++ EE KE L HSERLAIA
Sbjct: 754 FLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIA 813
Query: 415 YGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDY 474
+GL++T P +R+ KNLR+C DCH A K +SKIV RE+I+RD +RFHHFR+G CSCGDY
Sbjct: 814 FGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDY 873
Query: 475 W 475
W
Sbjct: 874 W 874
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 95 LESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
L S + + SL + + EA+ Y M Q G +S+L +C +L+ + GK +H
Sbjct: 252 LVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGV-TLASVLPACSHLEMLGCGKEIH 310
Query: 152 E-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
+L + +++ + L++MY C R VFD + +R ++ W+ MI+GY N
Sbjct: 311 AFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFD 370
Query: 211 ADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAV--KEGF 249
+ + LF E + + G P+ T V AC E+ KEG
Sbjct: 371 YEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGI 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C +S + +H + F KD + N L++MY + +AR +F +
Sbjct: 393 LSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN 452
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPH-----------------PDKETF 232
++++ SW+ MI+GY G+ D L L M R H P+ T
Sbjct: 453 RKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTL 512
Query: 233 LVVFAACASAEAVKEG 248
+ V CA+ A+ +G
Sbjct: 513 MTVLPGCAALAALGKG 528
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 133 SLLDSCGNL-KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+ +C NL + +GK+VH + + + NN L+ MY K A+ +FD
Sbjct: 191 SVAHACSNLINGLLLGKQVHAFVLRNGDWRTFT-NNALVTMYAKLGRVYEAKTLFDVFDD 249
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG--F 249
++L SW+ +IS + N + + L+ M ++G P+ T V AC+ E + G
Sbjct: 250 KDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEI 309
Query: 250 LYFEIMKND 258
F +M ND
Sbjct: 310 HAFVLMNND 318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L + ++ + +GK++H + + N L+ MYGKC + AR+VFD++
Sbjct: 88 FPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEIT 147
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R+ SW+ MI+ + + LF M P T + V AC++
Sbjct: 148 NRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSN 198
>gi|15226292|ref|NP_180984.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75330956|sp|Q8S8Q7.1|PP183_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g34370, mitochondrial; Flags: Precursor
gi|20197161|gb|AAM14949.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|67633584|gb|AAY78716.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253871|gb|AEC08965.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 469
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 256/477 (53%), Gaps = 51/477 (10%)
Query: 18 SSNFNSKI-SHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPK 76
S FNS+ SH++ ++T SS +L +++N FV+ +R S
Sbjct: 25 SRCFNSRAQSHNLITKTIT---SSLQDVL------TRPIWQNRSFVQCRRVSS------- 68
Query: 77 TGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV-FSSLL 135
++Q N+ + +E+ D +LCK+ K+REA+E + D GY V F LL
Sbjct: 69 ----YAQMVNN--HQSVTIETFD----ALCKQVKIREALEVI--DILEDKGYIVDFPRLL 116
Query: 136 ---DSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
CG ++++E + VH+ + D + +IEMY C +T A VF+++ KR
Sbjct: 117 GLAKLCGEVEALEEARVVHDCITPL----DARSYHTVIEMYSGCRSTDDALNVFNEMPKR 172
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N +W MI A NG+G + +F + + G PDKE F VF AC S + EG L+F
Sbjct: 173 NSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHF 232
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M DYG+V +E Y+ +I++L + GHL EA +FVERM EP+VE+WE L N + G
Sbjct: 233 ESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY 292
Query: 313 VELEDRAEELLGDLDPSKAIVDKIP--LPPRKKQSATNMLEE-----------KNRVSDY 359
+EL DR EL+ LD S+ + + + SA L+E K R+ ++
Sbjct: 293 LELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEF 352
Query: 360 RSTDL-YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLI 418
R+ D + G + L QM + G+VP TR ++EE KE+ L + S +LA A+ +I
Sbjct: 353 RAGDTSHLGTVSAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAII 412
Query: 419 STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
++ R PL +++N+R C D HN K++S I GR LI RD K++H +++G CSC DYW
Sbjct: 413 NSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 220/403 (54%), Gaps = 28/403 (6%)
Query: 101 NLLSLCKEGKV-REAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTS 157
+++S +G+ +EA+E + A D S S+L +C + ++ +G VH + ++
Sbjct: 183 SMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESN 242
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
D++L L++MY KC + + KVF + +++ +W MI G A +G G D L LF
Sbjct: 243 RVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLF 302
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M G P++ TF+ V AC V +G YF M + +G+VP +EHY ++ +LG
Sbjct: 303 SEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGR 362
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK----AIV 333
AGH+ EA E + M F+P +W L +IH +VE+ + A L LDP ++
Sbjct: 363 AGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLL 422
Query: 334 DKIPLPPRKKQSATNM-----------------LEEKNRVSDYRSTDLYRGE----YEKM 372
I + M +E +N V ++ S D Y+ +
Sbjct: 423 SNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKML 482
Query: 373 KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNL 432
+ + ++R+AGY P T VL DIDE++K++AL HSE+LAIA+GL+ TP R LRI KNL
Sbjct: 483 EEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNL 542
Query: 433 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
R C DCH+AIK++S R+LIVRD RFHHF +G+CSC DYW
Sbjct: 543 RACEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N +I Y + +AR++FD R R+ SW MIS YA + L L+ +M
Sbjct: 145 RDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREM 204
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
R G PD + + V +AC++ A+ G
Sbjct: 205 RVAGVAPDCISMVSVLSACSAMGALAIG 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV L N ++ Y ARKVFD + R+L SW+ MI GYA G +F+
Sbjct: 114 RDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGT 173
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
R D ++ + +A A KE + M+ G+ P ++++ + G
Sbjct: 174 RDR----DAFSWSSMISAYAKGRCSKEALELWREMRV-AGVAPDCISMVSVLSACSAMGA 228
Query: 281 L---IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
L E FVE E +++ AL + GD+E
Sbjct: 229 LAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIE 265
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 146 MGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCC--NTRLARKVFDQLRKRNLSSWHLMIS 202
+G +H LR+ D+ + L+EMY K LAR FD+ +R++ ++M++
Sbjct: 65 LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124
Query: 203 GYAANGQGADGLMLFEQM 220
Y A G+ A+ +F+ M
Sbjct: 125 AYVARGEVAEARKVFDGM 142
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 195/370 (52%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ LL++C L + G +H S F V + N LI MY K + A+KVF +
Sbjct: 338 YAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMM 397
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ MI G++ +G G L++F+ M HP+ TF V +AC V+EGF
Sbjct: 398 HRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFY 457
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + +G+ PG+EHY I+ +L G L EA F+ P + V W L N +H
Sbjct: 458 YLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVH 517
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
+ L E + ++DP + ++ I + KK+ +
Sbjct: 518 QNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSW 577
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E N + S D Y Y+K+K L ++ GY PD VLHD+++E KE L
Sbjct: 578 IEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLS 637
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIAYGL+ P + +IKNLRIC DCH+A++++SK+ R ++VRD RFHHFR
Sbjct: 638 YHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFR 697
Query: 466 DGKCSCGDYW 475
DG+CSC DYW
Sbjct: 698 DGRCSCLDYW 707
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L SL + G +RE +E + S S +D F + C +LK + +G VH + TS
Sbjct: 206 LSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDV 265
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D +++ +I MYGKC + +AR VFD L+ RN+ W +++ NG + L LF +
Sbjct: 266 ECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSK 325
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVL 275
M + ++ T+ V+ ACA A + G L + + G +H++ A+I +
Sbjct: 326 MEQENVKSNEFTYAVLLNACAGLSARRNGSLL-----HGHSEKSGFKHHVMVGNALINMY 380
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+G + A++ M + W A+
Sbjct: 381 AKSGDIEAAKKVFSDMMHRDII-TWNAM 407
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
KV ++ M + + S + + + SC + +E G++ H LL + F + N L
Sbjct: 115 KVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNAL 174
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ MY KC + A V++++ ++ +++ ++S NG +GL + M DK
Sbjct: 175 VSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDK 234
Query: 230 ETFLVVFAACASAEAVKEGF 249
TF+ F+ CAS + ++ G
Sbjct: 235 VTFVNAFSLCASLKDLRLGL 254
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 134 LLDSCGNLKSIEMGKRVH-ELLRTSAFVKD--VELNNKLIEMYGKCCNTRLARKVFDQLR 190
LL + K++++GK +H L+ TS ++ +E+N+ LI Y K +A +FD++
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNS-LINFYAKVNQVSIAHNLFDRMP 93
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
+RN+ SW +++GY NG + L + M G P++ + ++C V+EG
Sbjct: 94 ERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEG 152
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 205/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++++C L ++ + ++ + + F DV L +I+MY KC + AR+VFD+++++
Sbjct: 206 TVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEK 265
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y +G+G D + LF M P++ TF+ + AC+ A ++EG +F
Sbjct: 266 NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFF 325
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M ++ + P ++HY ++ +LG AG L EA +E M E +W AL +IH
Sbjct: 326 NSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSK 385
Query: 313 VELEDRAEELLGDLDP-------------SKA--------IVDKIPLPPRKKQSATNMLE 351
+EL ++A L +L P +KA D + KK +E
Sbjct: 386 MELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIE 445
Query: 352 EKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+ + RS + YE + L ++ AGYVPDT +VL D++EE K++ L H
Sbjct: 446 VDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTH 505
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GLI+ P P+RI KNLR+CGDCH K++S I+ R +IVRD RFHHF DG
Sbjct: 506 SEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDG 565
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 566 TCSCGDYW 573
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C + +++G+ +H+++ + D + L++MY KC A+++F+++ ++
Sbjct: 107 VIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKD 166
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L +W +MI Y A+ + L+LF++MR+ G PDK + V ACA K G ++
Sbjct: 167 LVTWTVMIGAY-ADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACA-----KLGAMHRA 220
Query: 254 IMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
NDY + G + A+I + G + A E +RM E V W A+
Sbjct: 221 RFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK-EKNVISWSAMIAAYGY 279
Query: 310 HG 311
HG
Sbjct: 280 HG 281
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL C N+ I ++VH + + ++D+ + NKL+ Y + A +FD L R+
Sbjct: 9 LLLRCRNVFHI---RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRD 65
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+W +M+ G+A G A F ++ + G PD T V C ++ G + +
Sbjct: 66 SKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHD 125
Query: 254 IMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERM 291
++ +G++ +H++ +++ + + +A+ ERM
Sbjct: 126 VVLK-HGLLS--DHFVCASLVDMYAKCIVVEDAQRLFERM 162
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 201/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +S L +C ++ G+ ++ + S D +L +++MY KC A +VFD L
Sbjct: 232 VATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWRVFDSL 291
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R L++W+ MI G+A +G+ D L LF QM G PD T L V ACA A V EG
Sbjct: 292 PARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGR 351
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
Y + + +GI P EHY ++ + G AG L EA++ ++ MP +P + V AL +I
Sbjct: 352 RYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALLGACKI 411
Query: 310 HGDVELEDRAEELLGDLDPSKA-----IVDKIPLPPR----------------KKQSATN 348
HGDV+L + + DLDP + + + + R K++ +
Sbjct: 412 HGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDERNVSKEAGRS 471
Query: 349 MLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++E ++R +L R Y + ++R GYVPDT LHD+ EE KE AL
Sbjct: 472 VIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKEAAL 531
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GL+ PR LRI KNLR+C DCH A K +S++ GRE++VRD RFHHF
Sbjct: 532 LCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVFGREIVVRDRSRFHHF 591
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 592 KDGMCSCKDYW 602
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
Query: 172 MYGKCCNTRL---ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
M G C L AR+VFD + RNL SW+ MISGY + D L +F++MR G +
Sbjct: 170 MVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGVEGN 229
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
AC A A+ G + ++ GI + A++ + G + EA
Sbjct: 230 GFVATSALVACTGAGALGRGREIYRWVEQS-GIEVDAKLATAVVDMYCKCGCVDEAWRVF 288
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+ +P + W + +HG D A EL ++ + D + L
Sbjct: 289 DSLPAR-GLTTWNCMIGGFAVHGRC---DDALELFHQMEAAGVAPDDVTL 334
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 218/402 (54%), Gaps = 28/402 (6%)
Query: 102 LLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L+ L + G +A+ Q + +A F SL+ SC +L S++ G+ +H L F
Sbjct: 404 LVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGF 463
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYAANGQGADGLMLFE 218
D+ L++MY KC LA ++F +++ W+ MI+GY +G G + ++
Sbjct: 464 AFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYH 523
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+M + G P++ TFL + +AC+ + V++G F M+ D+ I P +HY ++ +L A
Sbjct: 524 KMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRA 583
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD---PSKAI--- 332
G EA+ +E+MPF+P V EAL + + H ++ L + + L LD P I
Sbjct: 584 GRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLS 643
Query: 333 -----------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEK----MK 373
VD I R KK +++E N V + + D +E+ ++
Sbjct: 644 NIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLE 703
Query: 374 GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLR 433
L + +GYVPDT VL D+DEE K + L HSERLAIA+GL++TP +RI KNLR
Sbjct: 704 SLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLR 763
Query: 434 ICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+CGDCH K +SKIV RE+IVRD RFHHF +G+CSCGDYW
Sbjct: 764 VCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 102 LLSLC-KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSA 158
++S C + G V E+ + + +S G+D+ + SLL C S+ GK +H +
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGC-AIRS 361
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
F ++ L+ ++++Y KC + + A VF++++ RN+ +W M+ G A NG D L LF
Sbjct: 362 FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFA 421
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
QM++ G + TF+ + +CA ++K G ++ + + G I + A++ +
Sbjct: 422 QMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR--LGFAFDIVNMTALVDMYAK 479
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + AE V +W ++ +HG
Sbjct: 480 CGKINLAERIFSHGSISKDVVLWNSMITGYGMHG 513
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SL+ +CG + ++++GK +H + D+ + ++MY K + AR VF ++
Sbjct: 235 TSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPT 294
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RNL SW+ MISG NG + LF ++ ++ D T + + C+ ++ G +
Sbjct: 295 RNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKIL 354
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + AI+ + G L +A RM + V W A+
Sbjct: 355 HGCAIRSFE--SNLILSTAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAM 403
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFSSL--LDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ RE +E G S + D S L +C + EMG + K+
Sbjct: 107 QSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRF 166
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + +I K A++VFD + +++ W+ +I GY G LF +M +G
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSG 226
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
P T + AC +K G
Sbjct: 227 IKPSPITMTSLIQACGGIGNLKLG 250
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
++ S L +S NL + K H + T++ D + KL++ Y + AR VFD
Sbjct: 32 HNFLSLLRESSKNLIWV---KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFD 88
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
Q + + M+ GY +G+ + L LF MR D + ACAS+ +
Sbjct: 89 QFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEM 148
Query: 248 GFLYFEIMKNDYGIVPGIE--HYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G EI+ + + G+E ++ ++I L G + EA+ + MP + V W ++
Sbjct: 149 G---MEIISS--AVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVV-CWNSI 202
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 211/386 (54%), Gaps = 27/386 (6%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E M DA S+L +C + ++ GK +H + F V + N L+ MY K
Sbjct: 446 EMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMK 505
Query: 176 CCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
C R +F+ + R+RN+ SW+ +ISGY +G G + L +FE+M + G P+ TF+
Sbjct: 506 CGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVS 565
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
V AC+ V++G FE M +Y + P EHY ++ +LG AG L EA E ++ M +
Sbjct: 566 VLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQ 624
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------IVDKIPLPPR----- 341
P+ +VW +L +IHG VE + A L DL+P A I + L +
Sbjct: 625 PSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLK 684
Query: 342 --------KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTR 389
+K + +E K ++ + S D + E+++ L G QM+ GYVPDTR
Sbjct: 685 ELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTR 744
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
VL+DI+EE KE+ L HSE+LA+A+GLI T +RI KNLR+C DCH+ K +SK
Sbjct: 745 SVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFT 804
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
RE++VRD RFHHFR+G CSC DYW
Sbjct: 805 DREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+ Y K A +VF + RNL SW MI YA N + D + +F++M +
Sbjct: 394 TTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDAD 453
Query: 227 --PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
P+ T + V ACA A+ +G L+ I++ + ++ +
Sbjct: 454 LVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSV 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 18/209 (8%)
Query: 105 LCKEGKVREAIEYM-GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS-AFVKD 162
LC G++ +A + G A Y+ SLL + + + VH L F D
Sbjct: 227 LCAHGRLAQATALLQGLPAPTQRTYE---SLLLAAARARDTALAAAVHRRLEADPVFRSD 283
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
L+ +LIE Y AR+VFD+ +N+ W+ M+ A G + L M +
Sbjct: 284 PFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGR 343
Query: 223 TGPHPDKETFLVVFAACASAEA--------VKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
G D ++ AC +A A V+E ++ ++ YG+ + +I
Sbjct: 344 LGVPVDSYSYAHGLKACIAASASHLPASARVRE--MHAHAIRRGYGLHTHVA--TTLIDC 399
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + AE MP V W A+
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVS-WSAM 427
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 212/375 (56%), Gaps = 33/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS++ + NL + +GK++H L+ + + ++N L++MY KC + A+K+F ++
Sbjct: 240 ILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRM 299
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ SW +I G A +G + L L+ +M TG P++ TF+ + AC+ V +G
Sbjct: 300 VQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGR 359
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M DYGI P ++HY ++ +L +GHL EAE ++ MPF+P W AL +
Sbjct: 360 YFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNH 419
Query: 310 HGDVELEDRAEELLGDL---DPSKAI--------------VDKIPLPPRKKQSATNMLEE 352
H + + R + L L DPS I V K+ R+ +A + +E
Sbjct: 420 HRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKV----RRLMAAMEVKKE 475
Query: 353 KNR---VSDYRSTDLYRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
V S GE + ++ L+ +M++ GY+PDT VLHD++++ K
Sbjct: 476 PGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEK 535
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+ L +HSERLA+AYGL+ P M L I+KNLR+CGDCH +K +S IV RE++VRD R
Sbjct: 536 ERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANR 595
Query: 461 FHHFRDGKCSCGDYW 475
+HHF+DGKCSC ++W
Sbjct: 596 YHHFKDGKCSCNNFW 610
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+ L+ +C L +++ GK+VH S D + + L++MY KC + R VFD +
Sbjct: 107 VFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSI 166
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+N SW MISGYA +G+ D + LF++M
Sbjct: 167 SSKNSISWTAMISGYAQSGRKLDAIQLFQKM 197
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C +S +GK++H + + + L+N LI MYGKC + A +F+QL R+
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 195 SSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
SW +++ L +F M ++ G PD F + ACA A+K+G
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQG 124
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 213/383 (55%), Gaps = 27/383 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + Y ++ +L + L ++++GK+VH + S V L N LI+MY KC N
Sbjct: 458 QGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNL 517
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAA 238
+R++FD + +R + SW+ M+ GY+ +G+G + L LF MR +T PD T L V +
Sbjct: 518 TYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSG 577
Query: 239 CASAEAVKEGFLYFEIMKN-DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C+ +G F M + + P +EHY ++ +LG +G + EA EF+++MPFEPT
Sbjct: 578 CSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTA 637
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKI 336
+W +L ++H +V++ + A + L +++P A + D +
Sbjct: 638 AIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLM 697
Query: 337 PLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVL 392
K+ + +E + + ++D E K+K L+ +E GYVPD VL
Sbjct: 698 LKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVL 757
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+DEE KEK L HSE+LA+++GLI++P +P+R+IKNLRIC DCHN K +SK+ GRE
Sbjct: 758 HDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGRE 817
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+ +RD RFH GKCSC DYW
Sbjct: 818 VSLRDKNRFHRIVGGKCSCEDYW 840
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
++ ++++L+ C N ++ G+RVH + + ++ V L +LI +Y KC + A VFD
Sbjct: 243 FENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFD 302
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLF--------------EQMRKTGPH------- 226
++ +RN+ SW MIS Y+ G + L LF ++++ + P+
Sbjct: 303 EMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTE 362
Query: 227 PDKETFLVVFAACASAEAVKEG----FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P++ TF V +C S+ G L ++ D+ V +++ + G +
Sbjct: 363 PNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGS-----SLLDMYAKDGKIH 417
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
EA E +P V + +AQ+ D E + L G+
Sbjct: 418 EARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGE 460
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L SC + +G+++H L+ + V + + L++MY K AR VF+ L
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ S +ISGYA G + L LF +++ G + T+ V A + A+ G
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQ 487
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +++++ +++ ++I + G+L + + M +E TV W A+
Sbjct: 488 VHNHVLRSEIPSFVVLQN--SLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGYSK 544
Query: 310 HGD 312
HG+
Sbjct: 545 HGE 547
>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
Length = 948
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 222/404 (54%), Gaps = 31/404 (7%)
Query: 102 LLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIE-MGKRVHELLRTS 157
+ +L + G R A+ M QD +G + +L +C + IE ++VH LL
Sbjct: 546 IAALGRHGDPRGAVAMAARMQQDGWRPSGATMVG-VLAACAHAGMIEEAARKVHSLLVDG 604
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ--GAD-GL 214
F D E+ ++ MY K + + A FD++ ++ +W M+ Y G+ +D L
Sbjct: 605 GFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRAL 664
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
L M++ G PDK TF+ + ACA ++E YF+ MK DYG+VP +EHY+A++
Sbjct: 665 KLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDT 724
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL----GDLDP-- 328
+ G+L EAE+ + +P + +W AL + D R E++ LDP
Sbjct: 725 VARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLG 784
Query: 329 ------------SKAIVDKIPLPPRKKQSATNMLEEKNRVSDY----RSTDLYRGEYEKM 372
+K + + KK+ +M+ KN V + RS R Y ++
Sbjct: 785 TGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEV 844
Query: 373 KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNL 432
+ +++ GY+PDTRYVLHD+ E+ KE+ L YHSERLA+AYG ++TPP PLR+IKNL
Sbjct: 845 DRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNL 904
Query: 433 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHF-RDGKCSCGDYW 475
R+CGDCH A K+ +K++ RE+IVRDN+RFHHF +DG CSCGDYW
Sbjct: 905 RVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V + + +C ++ +E GK +H +D + L++MY +C + A VF ++
Sbjct: 475 VLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEI 534
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ + +W MI+ +G + + +M++ G P T + V AACA A ++E
Sbjct: 535 ERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAA 594
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ D G E A++++ G + EA +++ P V+ W +
Sbjct: 595 RKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCR 653
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPL 338
G DRA +L + + DK+
Sbjct: 654 LGKYNASDRALKLARMMQQDGVMPDKVTF 682
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELL---RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
F ++LD+C NL ++E GK++ L + + + +I M+ + + LAR+ FD
Sbjct: 373 FITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFD 431
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +++++++ MI+GYA N Q + L +F++M + D V +ACAS ++E
Sbjct: 432 KISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEE 491
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G L+ M D G+ A++ + G + +A + P W A+
Sbjct: 492 GKALHCSAM--DLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIE-RPDTVAWSAMIAA 548
Query: 307 AQIHGD 312
HGD
Sbjct: 549 LGRHGD 554
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 56/109 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++LDS L I GKR+H ++ +D + +++MY + + + A + FD++
Sbjct: 272 FVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRID 331
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ +++W +++ Y G + + E+M G P++ TF+ + C
Sbjct: 332 QPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTC 380
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 10/201 (4%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
D + +L C L+++ G RVH+ +R S + + N L+ MY N AR++FD
Sbjct: 64 DSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDG 123
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L N+ S+ ++ Y G + L + R D + A + G
Sbjct: 124 LGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLG 183
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEV--WEALR 304
F + I + Y + G+ I++I + + G + A + +R P+ +V W +
Sbjct: 184 RFFHDTIRRCGYDLDAGVA--ISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKIL 241
Query: 305 NFAQIH----GDVELEDRAEE 321
H G ++L DR E
Sbjct: 242 AACNEHRDYIGALDLFDRMRE 262
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR-- 192
+++ G + + +G+ H+ +R + D + LI MY C A + FD+ R
Sbjct: 171 VEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAP 230
Query: 193 --NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW +++ + L LF++MR+ G PD+ F+ V + + +G
Sbjct: 231 SSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQG-K 289
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
M D + A++K+ G + +A +R+ +P V W L
Sbjct: 290 RIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRID-QPGVAAWTVL 341
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 205/370 (55%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ LL+SC + ++ GK +H ++ S F + + N LI MY K + A KVF ++
Sbjct: 334 FAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMI 393
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ +W MI G + +G G + L++F++M P TF+ V +ACA +V+EGF
Sbjct: 394 CRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFY 453
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + GI PG+EHY I+ +L AG L EAE F++ P + V W L + +H
Sbjct: 454 YLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVH 513
Query: 311 GDVELEDRAEELLGDLDP-------------SKAI----VDKIPLPPR----KKQSATNM 349
+ L + EL+ +DP +KA V KI R KK+ +
Sbjct: 514 QNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASW 573
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N + + S E YEK++ L +R GYVPD V HD+++E K + +
Sbjct: 574 IEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVS 633
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIAYGL+ TP P+R+IKNLR+C DCH+A+K++SK+ R +IVRD RFH F
Sbjct: 634 YHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFG 693
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 694 DGGCSCADYW 703
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-EL 153
S ++ + L + G EA+E + + +D + + C +LK + +G +VH +
Sbjct: 197 SYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRM 256
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
RT A D +++ +I+MYGKC N ARKVF++L+ +N+ SW +++ Y+ NG +
Sbjct: 257 FRTGA-EYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEA 315
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI---- 269
L F +M G P++ TF V+ +CA A+ G L +K G E +I
Sbjct: 316 LNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKS-----GFEDHIIVGN 370
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
A+I + +G + A + M ++ W A+ HG
Sbjct: 371 ALINMYSKSGSIEAAHKVFLEMICRDSI-TWSAMICGLSHHG 411
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 35/201 (17%)
Query: 134 LLDSCGNLKSIEMGKRVH-ELLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQLRK 191
LL + K+++ GK +H L+ T+ KD + N LI +Y KC +AR +FD +RK
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASA-------- 242
RN+ SW +++GY NG + L LF+ M P++ F + ++C+ +
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 243 ---EAVKEGFLYFEIMKND-----------------YGIVPGIE--HYIAIIKVLGSAGH 280
A+K G ++ + +KN + VPG++ Y II L G+
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 281 LIEAEEFVERMPFEPTVEVWE 301
EA E ++RM E VW+
Sbjct: 211 PSEALEVLDRMVDECI--VWD 229
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F++++ SC + + G + H S V + N LI MY + + + A V+ ++
Sbjct: 131 IFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEV 190
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ S++++I+G NG ++ L + ++M D T++ F C+ + ++ G
Sbjct: 191 PGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLG- 249
Query: 250 LYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + + ++ AII + G G+++ A + R+ + V W A+
Sbjct: 250 --LQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVS-WTAI 302
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 212/394 (53%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EAI+ Q + D ++ +L +C L ++E+G+ V L+ + F+ + L
Sbjct: 293 GLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG 352
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI++Y KC + A +VF +++++ W+ +ISG A NG LF Q+ K G
Sbjct: 353 TALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIK 412
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD TF+ + C A V EG YF M + + P IEHY ++ +LG AG L EA +
Sbjct: 413 PDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQ 472
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------------------ 328
+ MP E VW AL +IH D +L + A + L +L+P
Sbjct: 473 LIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLK 532
Query: 329 -SKAIVDKIPLPPRKKQS--ATNMLEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMRE 381
+A ++ + ++ Q + +E V ++ D Y Y K+ L +M+
Sbjct: 533 WDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKV 592
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGYVP T +VL DI+EE KE L HSE+LAIA+GLIS P +R++KNLR+CGDCH A
Sbjct: 593 AGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMA 652
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++S I GRE+ VRDN RFH FR+G CSC DYW
Sbjct: 653 IKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK REAI+ + + D F+ +L +C L + G+ +H+ + V++V +
Sbjct: 192 GKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVG 251
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC N AR VFD + ++++ SW MI GYA NG + + LF QM++
Sbjct: 252 TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVK 311
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD T + V +ACA A++ G ++ + +N++ P + A+I + G + A
Sbjct: 312 PDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAKCGSMSRAW 369
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
E + M E VW A+ + ++G V++
Sbjct: 370 EVFKGMK-EKDRVVWNAIISGLAMNGYVKI 398
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 113 EAIEYMGQDASASAGY----DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
+AIE+ G S G+ F +L +C L +++G ++H L+ F DV +
Sbjct: 95 DAIEFYG--LMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTS 152
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L+ +Y KC A KVFD + +N+ SW +ISGY G+ + + +F ++ + PD
Sbjct: 153 LVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212
Query: 229 KETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
T + V +AC + G +++ IM + G+V + +++ + G++ +A
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIM--EMGMVRNVFVGTSLVDMYAKCGNMEKARSV 270
Query: 288 VERMPFEPTVEVWEAL 303
+ MP E + W A+
Sbjct: 271 FDGMP-EKDIVSWGAM 285
>gi|302754748|ref|XP_002960798.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
gi|300171737|gb|EFJ38337.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
Length = 481
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 214/396 (54%), Gaps = 28/396 (7%)
Query: 108 EGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
E K +EAIE + Q ++ V + +L +C NL + G+ H D +
Sbjct: 86 EKKPKEAIELYHALQQSNLPVTNTVLAIVLGACSNLVDSDEGRAAHYTAIELGLQDDPVV 145
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLS--SWHLMISGYAANGQGADGLMLFEQMRKT 223
N + MY KC AR VFD + RN+ +W +I Y + G+ + L L +M+
Sbjct: 146 QNAVATMYAKCGGLEEARAVFDAMEIRNVDALTWSSLIGVYGSQGKTDESLRLARRMQHE 205
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G D F + +CA+ E +F M++DYG+VPG EH+ ++ +G AGHL +
Sbjct: 206 GMILDGNCFANLIFSCANGRRDAEACRFFMDMRSDYGVVPGKEHFGCLVDAVGRAGHLKD 265
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------- 328
AE+ ++ MP +P VW L AQ+HGD + R+ E++ ++P
Sbjct: 266 AEDLIKAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIMMKMNPQLDPLGTGANRTAAR 325
Query: 329 ---SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM-----R 380
++ + + + KK+ +M+ N V + + D +++ ++ +
Sbjct: 326 WEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRSHIHTKEIYAEVDRITEICKK 385
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
E Y+PDTRYVLHD+ E+ K K L YHSERLA+AYG I+TPP LR+IKNLR+CGDCH
Sbjct: 386 EENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIATPPGSALRVIKNLRVCGDCHT 445
Query: 441 AIKIMSKIVGRELIVRDNKRFHHF-RDGKCSCGDYW 475
K+ +KI+ RE+IVRDN+RFHHF +DG CSCGDYW
Sbjct: 446 ISKMWAKIMQREIIVRDNRRFHHFAKDGTCSCGDYW 481
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 221/395 (55%), Gaps = 29/395 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G++R+A++ Q D F+ SLL +C +L ++ G+ +H + +DV L
Sbjct: 349 GRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLG 408
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC A VF ++ +R++ +W MI+G A NG G D L F QM++ G
Sbjct: 409 TALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQ 468
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P T++ V AC+ + + EG L+F M++ + + P +EHY +I +L +G L EA
Sbjct: 469 PTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMH 528
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD----KIPLPPRK 342
V+ MP +P +W ++ + ++H +++L A E L L P + V I + R+
Sbjct: 529 LVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQ 588
Query: 343 KQSATN---MLEEKN--RVSDYRSTDLYRGEYEK-----------------MKGLNGQMR 380
A ++EE+ + + Y S + G+ K M+ + +++
Sbjct: 589 WADAKRVRMLMEERGVKKTAGYSSITV-AGQVHKFVANDQSHPWTLEIMAMMEEIACRLK 647
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GY P T + D+DEE KE+AL HSE++AIA+GLIS PP +P+ I+KNLR+C DCH+
Sbjct: 648 SVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHS 707
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK++S++ RE+IVRD RFHHFRDG CSC D+W
Sbjct: 708 AIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I+ Y K + +AR +FDQ+ R++ +++ MI+GY +G+ D L LF QMR+ G
Sbjct: 308 NAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMR 367
Query: 227 PDKETFLVVFAACASAEAVKEG 248
D T + + ACAS A+ G
Sbjct: 368 ADNFTVVSLLTACASLGALPHG 389
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
AR++ Q +RN+ SW +I+GY+ G+ AD + F M G PD+ + +AC+
Sbjct: 190 ARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACS 248
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 219/379 (57%), Gaps = 30/379 (7%)
Query: 127 GYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
G+D + SS + +C L ++ GK+VH + S F ++ +++ LI+MY KC R A
Sbjct: 240 GFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREA 299
Query: 183 RKVFDQ-LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
VF L R++ W+ MISG+A + + + ++LFE+M++ G PD T++ V AC+
Sbjct: 300 YLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSH 359
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+EG YF++M + + P + HY +I +LG AG + +A + +ERMPF T +W
Sbjct: 360 MGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWG 419
Query: 302 ALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRK--------------- 342
+L +I+G++E + A + L +++P+ A ++ I +K
Sbjct: 420 SLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETD 479
Query: 343 --KQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID 396
K+ T+ +E KN++ + R+ Y K+ L ++++ Y DT LHD++
Sbjct: 480 VRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVE 539
Query: 397 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
E K+ L++HSE+LAI +GL+ P +P+RIIKNLRICGDCH +K++SK RE+IVR
Sbjct: 540 ENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVR 599
Query: 457 DNKRFHHFRDGKCSCGDYW 475
D RFHHF+DG CSCG++W
Sbjct: 600 DTNRFHHFKDGFCSCGEFW 618
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL C +S G+ H + D+ +N LI MY KC ARK F+++ ++
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L SW+ +I N + + L L QM++ G ++ T V CA A+ E
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC----- 163
Query: 254 IMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ- 308
+ + + I I+ A++ V + +A + E MP + V + + Q
Sbjct: 164 MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 223
Query: 309 -IHGDVELEDRAEELLG-DLDP 328
H + L R +L+G D DP
Sbjct: 224 GFHEEALLIFRNAQLMGFDQDP 245
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHE 152
L S + + +L + + REA++ + Q ++ F SS+L +C +I ++H
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+A + + L+ +Y KC + + A ++F+ + ++N +W M++GY NG +
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L++F + G D +ACA + EG
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEG 264
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 207/373 (55%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L++C +L + K +H + S +V + N LI MY +C + A ++F
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ + SW M++ ++ G+ A+ L LF++M G PD T+ + C ++++G+
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M + + P +H+ A++ +LG +G L +A+E +E MPFEP W +I
Sbjct: 566 RYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRI 625
Query: 310 HGDVELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATN 348
HG +EL + A E + +LDPS ++ K+ KK +
Sbjct: 626 HGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLS 685
Query: 349 MLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E ++ ++ S Y E++ L+G MR AGYVPDT+ VLHD+ E KE L
Sbjct: 686 FIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETML 745
Query: 405 QYHSERLAIAYGLIST-PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
YHSE++AIA+GL+S+ P+R++KNLR+C DCH A K +++I GR++IVRD RFH
Sbjct: 746 LYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHR 805
Query: 464 F-RDGKCSCGDYW 475
F DGKCSCGDYW
Sbjct: 806 FSSDGKCSCGDYW 818
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L SC + + G+ +HE +R S F +D + N LI MYGKC + AR VF+ +
Sbjct: 9 TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 190 --RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
R+RN+ SW+ MI+ YA NG + L+L+ +M G D TF+ V AC+S
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+++H + + F D+ + LI MYGKC ++ AR+VFD+++KR++ SW++MI Y
Sbjct: 226 GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVL 285
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGI 265
NG + L L++++ G K TF+ + AC+S +A+ +G ++ I++ G+ +
Sbjct: 286 NGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER--GLDSEV 343
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ + G L EA + M V W L
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAV-AWSTL 380
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +C ++K++ G+ VH + +V + L+ MY KC + ARKVF+ +
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 190 RKRNLSSWHLMISGYAANGQGAD----------------------------------GLM 215
+ R+ +W +I YA+NG G D +
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMK 429
Query: 216 LFEQMR-KTGPHPDKETFLVVFAACASAEAVKE-GFLYFEIMKNDYGIVPGIEHYIAIIK 273
+F +M G PD TF+ V ACAS + E L+ +I +++ + + +I
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESE--LESNVVVTNTLIN 487
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHGDVELEDRAEELLGDLDPSK 330
+ G L EAE E TV W A+ F+Q E D +E+ DL+ K
Sbjct: 488 MYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGRYAEALDLFQEM--DLEGVK 542
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +C S+ G+ +H + S L N L+ MY + + A+++F L
Sbjct: 112 TFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL 168
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ R+ +SW+ +I ++ +G + L +F++M K P+ T++ V + ++ E + EG
Sbjct: 169 QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGR 227
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ EI+ N G + A+I + G G EA E ++M V W +
Sbjct: 228 KIHAEIVAN--GFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS-WNVMIGCYV 284
Query: 309 IHGDVELEDRAEELLGDLD 327
++GD A EL LD
Sbjct: 285 LNGDFH---EALELYQKLD 300
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 208/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++++C + ++E GK++H S + +++ L+ MY K N A KVF +
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ SW+ MI+GY +G L +F+ M+ G D TF+ V AC A V+EG
Sbjct: 568 EERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGE 627
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF IM DY I EHY ++ + AG +A + + MPF + +W L ++
Sbjct: 628 KYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRV 687
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR-KKQSATN 348
H ++EL A E L L P+ A+ V K+ + KK++ +
Sbjct: 688 HRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747
Query: 349 MLEEKNRVSDYRSTDLYRG----EYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KNR+ + + D+ Y K++ L+ ++++ GY PDT YV HD++EE KE L
Sbjct: 748 WIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAIL 807
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIAYGLI+ PP P++I KNLRICGDCHN I+++S I R LIVRD+ RFHHF
Sbjct: 808 SQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHF 867
Query: 465 RDGKCSCGDYW 475
+ G CSCG YW
Sbjct: 868 KGGVCSCGGYW 878
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L + REA+ S+ G D S L CG L +G++VH S F
Sbjct: 76 LFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGF 135
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++DV + L++MY K + R +FD++ +N+ SW ++SGYA NG + + L Q
Sbjct: 136 LEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQ 195
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
M+ G +P+ TF V A A ++ G ++ I+KN +
Sbjct: 196 MQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L + + IE G +VH ++ + F + N LI MY K A VFD +
Sbjct: 208 FATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMV 267
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-EGF 249
R+ +W++MI GYAA G +G +F +MR G + F C+ +
Sbjct: 268 VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQ 327
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L+ ++KN Y I A++ + EA + V W A+
Sbjct: 328 LHCGVVKNGYEFAQDIR--TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H + + + K + L++ Y K N + +VF + +++ +W M++G A
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTR 484
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ +F Q+ K G P++ TF V AC+S+ A E
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVE 523
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E G+ +H + + F D + N L++MY KC LAR +FD +
Sbjct: 454 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 513
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++L SW +MI+GY +G G++ + F +MR +G PD+ +F+ + AC+ + + EG+
Sbjct: 514 PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW 573
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F +M+N+ I P EHY I+ +L AG+L +A +F++ MP EP +W AL +I
Sbjct: 574 GFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 633
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ DV+L ++ E + +L+P K + ++I +K +
Sbjct: 634 YHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCS 693
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K +V + + D K +K +M+E G+ P RY L D+ KE AL
Sbjct: 694 WIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMAL 753
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+G++S PP +R+ KNLR+CGDCH K MSK+V R++I+RD+ RFHHF
Sbjct: 754 CGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHF 813
Query: 465 RDGKCSCGDYW 475
+DG CSC +W
Sbjct: 814 KDGSCSCRGHW 824
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 53/262 (20%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
+ ++ ++ + C+ G +R A+E + Q + S+L C +LKSI+ G+R+H
Sbjct: 65 DCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIH 124
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTR------------------------------- 180
+++++ D L +KL+ MY C + R
Sbjct: 125 SIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFR 184
Query: 181 ------------------LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
ARK+FD+L R++ SW+ MISGY +NG GL LFEQM
Sbjct: 185 ESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLL 244
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G + D T + V A C++ + G L+ +K +G + + ++ + +G+L
Sbjct: 245 LGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNL 302
Query: 282 IEAEEFVERMPFEPTVEVWEAL 303
A + E M E +V W ++
Sbjct: 303 NSAIQVFETMG-ERSVVSWTSM 323
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ C N + +G+ +H ++F K++ LNN L++MY K N A +VF+ + +R
Sbjct: 256 SVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER 315
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW MI+GYA G + LF +M K G PD T + ACA ++ G
Sbjct: 316 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D+F+ ++L +C +E GK VH ++ + D+ ++N L++MY KC + A VF
Sbjct: 351 DIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVF 410
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+++ +++ SW+ MI GY+ N + L LF +M+ P+ T + ACAS A++
Sbjct: 411 SEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNSITMACILPACASLAALE 469
Query: 247 EGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
G ++ I++N + + + + A++ + G L A + +P E + W +
Sbjct: 470 RGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIA 526
Query: 306 FAQIHG 311
+HG
Sbjct: 527 GYGMHG 532
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 200/367 (54%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +L +++ G H L F D + N LI+MY KC AR+VF+++ + +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW+ MI GY +G G + L LF + G PD TF+ + ++C+ + V EG L+F+
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M D+ IVP +EH I ++ +LG AG + EA F+ MPFEP V +W AL + +IH ++
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 314 ELEDRAEELLGDLDPSK----AIVDKIPLPP-----------------RKKQSATNMLEE 352
EL + + + L P ++ I KK + +E
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V + D + K++ L +M+ GY + +V D++EE KE+ L YHS
Sbjct: 659 NGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHS 718
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+G+++ P+ + KNLR+CGDCH AIK M+ I RE+ VRD RFHHF++G
Sbjct: 719 EKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGT 778
Query: 469 CSCGDYW 475
C+CGD+W
Sbjct: 779 CNCGDFW 785
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C L + G+++H + V D+ L N L+ MY KC A + FD++
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN 374
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ S+ ++SG NG A L +F M+ +G PD T L V AC+ A++ GF
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ Y IV G A+I + G + A E RM V W A+
Sbjct: 435 -----SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS-WNAMIIG 488
Query: 307 AQIHG 311
IHG
Sbjct: 489 YGIHG 493
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL++C KS+ K++H+ + D + +KL +Y C LAR++FD++ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ +I YA NG + L+ M G P+K T+ V AC+ A+++G E
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG---VE 130
Query: 254 IMKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I + +G+ + A++ G L+EA+ M V W A+ ++G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV-AWNAMIAGCSLYG 189
Query: 312 DVELEDRAEELL------GDLDPSKAIVDKIP 337
L D A +L+ G S IV +P
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + G K++ GK +H +F V + L++MY KC ARK+FD + RN
Sbjct: 216 VLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRN 275
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
SW MI GY A+ + L LF+QM K P T V ACA + G
Sbjct: 276 EVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C L +IE G +H + DV + L++ Y KC A+++F + R+
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +W+ MI+G + G D + L QM++ G P+ T + V A+A+ G
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG 229
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 199/367 (54%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C L ++E+G L+ + F+ + L LI+MY KC A +VF +RK++
Sbjct: 253 VLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKD 312
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ ISG A +G LF QM K+G PD TF+ + AC A V EG YF
Sbjct: 313 IVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFN 372
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M+ + + P IEHY ++ +LG AG L EA + V+ MP E VW AL ++H D
Sbjct: 373 SMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDT 432
Query: 314 ELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM-----------------LEE 352
+L + + L L+PS + ++ I K + A + +E
Sbjct: 433 QLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEV 492
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V ++ D L Y K+ L ++ +GYVP T YVL DI+EE KE + HS
Sbjct: 493 DGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHS 552
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+GLIST P +R++KNLR+CGDCH AIK +S+ GRE+IVRDN RFH F DG
Sbjct: 553 EKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGS 612
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 613 CSCKDYW 619
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F LL +C L ++G ++H L+ + D +N L+ +YGKC A KVFD +
Sbjct: 111 FPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP 170
Query: 191 KRNLS--------------------------------------SWHLMISGYAANGQGAD 212
++N++ SW MI GYA+NG +
Sbjct: 171 EKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKE 230
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM-KNDYGIVPGIEHYIAI 271
L LF +M G PD + V ACA A++ G +M +N++ P + A+
Sbjct: 231 ALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TAL 288
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS 329
I + G + A E M + + VW A + + G V+ A L G ++ S
Sbjct: 289 IDMYAKCGRMDSAWEVFRGMR-KKDIVVWNAAISGLAMSGHVK---AAFGLFGQMEKS 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
S++ K VH L +D L NK++ NT + ++F Q ++ N+ ++ M
Sbjct: 20 FNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTM 79
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
I G N + + ++ MRK G PD TF + ACA K G L+ ++K
Sbjct: 80 IHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKA-- 137
Query: 260 GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G +++ + G G + A + + +P E V W A+
Sbjct: 138 GCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAI 180
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 207/366 (56%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
+ +C N+ S+E G + H T+ + + ++N L+ +YGKC + + ++F+++ R+
Sbjct: 375 ISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDE 434
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW M+S YA G+ + + LF++M + G PD T V +AC+ A V++G YFE+
Sbjct: 435 VSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFEL 494
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M N+YGIVP HY +I + +G + EA F+ MPF P W L + + G++E
Sbjct: 495 MINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLE 554
Query: 315 LEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATNMLEEK 353
+ A E L +LDP SK D + R +K+ + ++ K
Sbjct: 555 IGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWK 614
Query: 354 NRVSDYRSTD---LYRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
++ + + D Y + Y K++ L ++ + GY PDT +V HD++E K K L HSE
Sbjct: 615 GKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSE 674
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
RLAIA+GLI P +P+R+ KNLR+C DCHNA K +S + GRE++VRD RFH F+DG C
Sbjct: 675 RLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTC 734
Query: 470 SCGDYW 475
SCGD+W
Sbjct: 735 SCGDFW 740
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G +EAIE + D F S+L +CG L +I G+++H + +
Sbjct: 242 LAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDH 301
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + + LI+MY KC A+ VFD+++++N+ SW M+ GY G+ + + +F M++
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQR 361
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI----IKVLGSA 278
+G PD T +ACA+ +++EG + + I G+ HYI + + + G
Sbjct: 362 SGIDPDHYTLGQAISACANISSLEEGSQF-----HGKAITAGLIHYITVSNSLVTLYGKC 416
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
G + ++ M V + +AQ VE
Sbjct: 417 GDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVE 452
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 30/170 (17%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
G +A M +D S++ ++L + + +GK++H + F + + +
Sbjct: 117 GAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 176
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLS------------------------------SWH 198
L++MY K A+KVF L RN SW
Sbjct: 177 LLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWS 236
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
MI G A NG + + F +M+ G D+ F V AC A+ +G
Sbjct: 237 AMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDG 286
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ +S+ + C L + K +H ++RT + L+N ++ Y ++ AR+VFD
Sbjct: 4 NYYSAQIKQCIGLGASRHVKMIHGNIIRTLPH-PETFLHNNIVHAYALIRSSIYARRVFD 62
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ + NL SW+ ++ Y+ +G ++ FE++ P D T+ V+ + + V
Sbjct: 63 GIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKL----PDRDGVTWNVLIEGYSLSGLVGA 118
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF---VERMPFEPTVEV 299
+ M D+ + ++K+ S GH+ ++ V ++ FE + V
Sbjct: 119 AVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 173
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 200/367 (54%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +L +++ G H L F D + N LI+MY KC AR+VF+++ + +
Sbjct: 279 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 338
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW+ MI GY +G G + L LF + G PD TF+ + ++C+ + V EG L+F+
Sbjct: 339 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 398
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M D+ IVP +EH I ++ +LG AG + EA F+ MPFEP V +W AL + +IH ++
Sbjct: 399 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 458
Query: 314 ELEDRAEELLGDLDPSK----AIVDKIPLPP-----------------RKKQSATNMLEE 352
EL + + + L P ++ I KK + +E
Sbjct: 459 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 518
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V + D + K++ L +M+ GY + +V D++EE KE+ L YHS
Sbjct: 519 NGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHS 578
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+G+++ P+ + KNLR+CGDCH AIK M+ I RE+ VRD RFHHF++G
Sbjct: 579 EKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGT 638
Query: 469 CSCGDYW 475
C+CGD+W
Sbjct: 639 CNCGDFW 645
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 27/289 (9%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL++C KS+ K++H+ + D + +KL +Y C LAR++FD++ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ +I YA NG + L+ M G P+K T+ V AC+ A+++G E
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG---VE 130
Query: 254 IMKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I + +G+ + A++ G L+EA+ M V W A+ ++G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV-AWNAMIAGCSLYG 189
Query: 312 DVELEDRAEELL------GDLDPSKAIVDKIP-----LPPRK---KQSATNMLEEKNRVS 357
L D A +L+ G S IV +P L RK N + +
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIG 246
Query: 358 DYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
Y ++D + + + M+ +G PD +L + + ALQ+
Sbjct: 247 GYVASDCMKEALDIFR----MMQLSGIDPDLTTMLGVLPACSHLAALQH 291
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
ARK+FD + RN SW MI GY A+ + L +F M+ +G PD T L V AC+
Sbjct: 226 ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSH 285
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTV 297
A++ GF + Y IV G A+I + G + A E RM V
Sbjct: 286 LAALQHGFC-----SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV 340
Query: 298 EVWEALRNFAQIHG 311
W A+ IHG
Sbjct: 341 S-WNAMIIGYGIHG 353
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 212/373 (56%), Gaps = 36/373 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C ++ + ++G ++ + D + N +I MY KC ARK+FD
Sbjct: 528 WVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFD 587
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++L SW+ MI+GY+ +G G + +F+ M K G PD +++ V ++C+ + V+E
Sbjct: 588 FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQE 647
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G YF+++K D+ + PG+EH+ ++ +L AG+LIEA+ ++ MP +PT EVW AL +
Sbjct: 648 GKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSAC 707
Query: 308 QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSA 346
+ HG+ EL + A + L DLD + ++ KI KK
Sbjct: 708 KTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPG 767
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E KN+V +++ D+ + EK+ L ++ + GYV T + +I
Sbjct: 768 YSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVR-TESLRSEI------- 819
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+HSE+LA+A+G+++ P MP+ I+KNLRICGDCH IK++S + GRE ++RD RFH
Sbjct: 820 ---HHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFH 876
Query: 463 HFRDGKCSCGDYW 475
HF+ G CSCGDYW
Sbjct: 877 HFKGGSCSCGDYW 889
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 38/293 (12%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + +L + G+ REA+ + D ++S L +C L S+ GK++H +
Sbjct: 261 SWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S D + + ++E+Y KC + AR+VF LR RN SW ++I G+ G ++ L
Sbjct: 321 IRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESL 380
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACAS-----------AEAVKEGFLYFEIMKNDYGIVP 263
LF QMR D+ + + C++ + ++K G ++ N
Sbjct: 381 ELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN------ 434
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
++I + G+L AE M V L ++Q+ G++ +A E
Sbjct: 435 ------SLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQV-GNI---GKAREFF 484
Query: 324 GDLDPSKAIVDKIPLPPRKKQSA--------TNMLEEKNRVSDYRS-TDLYRG 367
+ I L + A + ML EK+ + D+ + L+RG
Sbjct: 485 DGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRG 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 43/264 (16%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G E++E Q + D F+ +++ C N + + +++H L S + V ++
Sbjct: 374 GCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVIS 433
Query: 167 NKLIEMYGKCCNTR-------------------------------LARKVFDQLRKRNLS 195
N LI MY KC N + AR+ FD + RN+
Sbjct: 434 NSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVI 493
Query: 196 SWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ M+ Y +G DGL ++ M + PD T++ +F CA A K G +I
Sbjct: 494 TWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLG---DQI 550
Query: 255 MKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ G++ A+I + G + EA + + + + V W A+ HG
Sbjct: 551 TGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVS-WNAMITGYSQHG- 608
Query: 313 VELEDRAEELLGDLDPSKAIVDKI 336
+ +A E+ D+ A D I
Sbjct: 609 --MGKQAIEIFDDMLKKGAKPDYI 630
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 39/208 (18%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + SCG L E+ ++ LL F D ++ +++M+ +C A K F Q+
Sbjct: 164 TFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQI 223
Query: 190 RK-------------------------------RNLSSWHLMISGYAANGQGADGLMLFE 218
+ R++ SW++M+S + +G+ + L +
Sbjct: 224 ERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAV 283
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVL 275
M G D T+ ACA ++ G L+ +++++ +P I+ Y+ A++++
Sbjct: 284 DMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS----LPCIDPYVASAMVELY 339
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G EA + TV W L
Sbjct: 340 AKCGCFKEARRVFSSLRDRNTVS-WTVL 366
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SCG L LLR +V +N ++ Y K + A ++F ++ +R+++S
Sbjct: 75 SCGALPD------ARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTS 128
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACAS 241
W+ ++SGY +G+ D + F MR++G P+ TF +C +
Sbjct: 129 WNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGA 174
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 209/379 (55%), Gaps = 38/379 (10%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +CG+ ++ +GK++H + + ++ L N LI+MY KC AR VF+ ++
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW MIS Y +G+G D + LF +++ +G PD F+ AAC+ A ++EG
Sbjct: 372 SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 431
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F++M + Y I P +EH ++ +LG AG + EA F++ M EP VW AL ++H
Sbjct: 432 CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLE--------------- 351
D ++ A + L L P ++ ++ I + + TN+
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASN 551
Query: 352 -EKNRV---------SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
E NR+ S +S ++YR ++ L +M+E GYVPD+ LHD++EE KE
Sbjct: 552 VEVNRIIHTFLVGDRSHPQSDEIYR----ELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Query: 402 KALQYHSERLAIAYGLISTP-----PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
L HSE+LAI + L++T +RI KNLRICGDCH A K++S+I RE+I+R
Sbjct: 608 THLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIR 667
Query: 457 DNKRFHHFRDGKCSCGDYW 475
D RFH FR G CSCGDYW
Sbjct: 668 DTNRFHVFRFGVCSCGDYW 686
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 129/311 (41%), Gaps = 28/311 (9%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLR 155
++V + S G E ++ G + D F +L +C +I +G+++H
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ + N L+ MYGKC AR V D++ +R++ SW+ ++ GYA N + D L
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
+ +M D T + A ++ E +Y + M G + + +I V
Sbjct: 228 VCREMESVKISHDAGTMASLLPAVSNTTT--ENVMYVKDMFFKMG-KKSLVSWNVMIGVY 284
Query: 276 GSAGHLIEAEEFVERMP---FEP-TVEV---------WEALRNFAQIHGDVELEDRAEEL 322
+EA E RM FEP V + AL +IHG +E ++L
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE----RKKL 340
Query: 323 LGDLDPSKAIVD---KIPLPPRKKQSATNMLEEKNRVSDYRSTDLY--RGEYEKMKGLNG 377
+ +L A++D K + + NM + ++ VS Y G L
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 378 QMREAGYVPDT 388
+++++G VPD+
Sbjct: 400 KLQDSGLVPDS 410
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LD+ +++++ + VH + + L KL+ Y + ARKVFD++
Sbjct: 44 LLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN+ ++MI Y NG +G+ +F M PD TF V AC+ + + G
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG- 159
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ + ++ + G G L EA ++ M V W +L
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS-WNSL 212
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 13/231 (5%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N + +F ++ K++L SW++MI Y N + + L+ +M G PD + V
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 238 ACASAEAVKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
AC A+ G Y E K ++P + A+I + G L +A + E M
Sbjct: 318 ACGDTSALSLGKKIHGYIERKK----LIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKN 354
V W A+ + G A L L S + D I + L E+
Sbjct: 374 DVVS-WTAMISAYGFSGR---GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 355 RVSDYRSTDLYR--GEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
R TD Y+ E + + + AG V + + D+ E E+
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV 480
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+SLL + ++ + G+++H L + F D ++N L+ MY +C A + FD+++
Sbjct: 449 FASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK 508
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ SW +ISG A +G L +F M G P+ T++ V +AC+ VKEG
Sbjct: 509 DHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE 568
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M+ D+G++P +EHY I+ +L +G + EA +F+ MP + VW+ L + + +
Sbjct: 569 HFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTY 628
Query: 311 GDVELEDRAEE--------------LLGDLDPSKAIVDKIPL-------PPRKKQSATNM 349
G+ E+ + A LL +L + D++ K++ +
Sbjct: 629 GNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSW 688
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ N + ++R+ D L Y K+ L ++++ GYVPDT VLHD+ EE KE+ L
Sbjct: 689 MDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLL 748
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE++A+A+GLI+T P+RI KNLR+C DCH+AIK +SK GRE+I+RD+ RFH +
Sbjct: 749 QHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMK 808
Query: 466 DGKCSCGDYW 475
DG CSCG+YW
Sbjct: 809 DGICSCGEYW 818
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
KV E +M D GY + SS++ +C L S+ +G+++H + V D ++ L
Sbjct: 229 KVVELFLHMLDDGFEPDGYSM-SSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGL 287
Query: 170 IEMYGKCCNTRL---ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGP 225
++MY K R ARKVF + + N+ SW +ISGY +G + +M LF +M
Sbjct: 288 VDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESI 347
Query: 226 HPDKETFLVVFAACAS 241
P+ T+ + ACA+
Sbjct: 348 RPNHITYSNLLKACAN 363
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 132 SSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+ LL S + +G+ +H LLR+ D + N L+ MY KC AR+VFDQ+
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
R+L SW M S A NG + L L +M + G P+ T AC E +
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163
Query: 249 --FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
L F + +G + A+I + G L+ A+ + + E T VW L
Sbjct: 164 GVVLGFVLKTGFWG--TDVSVGCALIDMFARNGDLVAAQRVFDGL-IERTSVVWTLL 217
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+L+T + DV + LI+M+ + + A++VFD L +R W L+I+ Y G +
Sbjct: 170 VLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASK 229
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI-----MKNDYGIVPGIEH 267
+ LF M G PD + + +AC +V+ G + + +D + G+
Sbjct: 230 VVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVD 289
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A +K+ S H A + + MP V W AL
Sbjct: 290 MYAKLKMERSMEH---ARKVFKTMP-RHNVMSWTAL 321
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S+LL +C NL + G+++H +L+TS +V + N L+ MY + ARK FDQL
Sbjct: 354 YSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNV-VGNALVSMYAESGCMEEARKAFDQL 412
Query: 190 RKRNLSS 196
+ N+ S
Sbjct: 413 YETNILS 419
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 215/395 (54%), Gaps = 29/395 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G++REA+ Q D F+ SLL +C +L ++ G+ +H + D+ L
Sbjct: 349 GRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLG 408
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC A VF + R++ +W MI+G A NG G L F M+ G
Sbjct: 409 TALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQ 468
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ T++ + AC+ + + EG LYFE M+ + I P IEHY +I +LG +G L EA +
Sbjct: 469 PNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMD 528
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVD----KIPLPPRK 342
V MP +P +W ++ + ++H D L A E L L+P + V I + R+
Sbjct: 529 LVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQ 588
Query: 343 KQSATN---MLEEKN--RVSDYRSTDLYRGEYEK-----------------MKGLNGQMR 380
+ A+ ++EE+ + + Y S + G+ K M+ + +++
Sbjct: 589 WEDASQIRRLMEERGVKKAAGYSSITV-AGQVHKFIVCDRTHPQIMEITAMMEEITRRLK 647
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GY P T + D+DEE KE AL HSE++AIA+GLIS P +PL IIKNLR+C DCH+
Sbjct: 648 SVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHS 707
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK++S+I RE+IVRD RFHHFRDG CSC D+W
Sbjct: 708 AIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 54/213 (25%)
Query: 89 LRGNAQLESLDVNLLSLCKEGKVREAIEYMG------QDASASAGYDVFSS--------- 133
+ G A+L LD + L + R I + G + A+ D F+S
Sbjct: 178 ISGLAKLGLLD-DAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPD 236
Query: 134 ------LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC----------- 176
LL +C LK + G+ +H+L+ + +L LI+MY KC
Sbjct: 237 EVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFD 296
Query: 177 ------------------C---NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
C + +AR +FDQ+ R+L +++ +I+GY G+ + L+
Sbjct: 297 ALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALL 356
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
LF QMR+ D T + + ACAS A+ +G
Sbjct: 357 LFMQMRRHDLRADNFTMVSLLTACASLGALPQG 389
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RN+ SW +ISGY+ G+ A+ + F M G PD+ T + + +ACA + + G
Sbjct: 200 RNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSL 259
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++ + G++ + +A+I + G + A E + + + W A+
Sbjct: 260 HKLV-GEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAM 310
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 197/371 (53%), Gaps = 53/371 (14%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +++L +C L +E GK+VH S + ++N L+ MY KC A KVFD +
Sbjct: 444 VIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 503
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ +W +I GYA NG+G D L E R
Sbjct: 504 EIQDVITWTALIVGYAQNGRGRDHAGLVEHGRS--------------------------- 536
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M+ YGI PG EHY +I +LG +G L+EA+E + +M +P VW+AL ++
Sbjct: 537 -YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRV 595
Query: 310 HGDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATN 348
HG+VEL +RA L +L+P A+ + L K+ +
Sbjct: 596 HGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCS 655
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E ++V + S D Y K+ + ++EAGYVPD + LHD+DEE KE L
Sbjct: 656 WIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGL 715
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+A+GL++ PP P+RI KNLRICGDCH A+K +S + R +I+RD+ FHHF
Sbjct: 716 AYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHF 775
Query: 465 RDGKCSCGDYW 475
R+G CSC DYW
Sbjct: 776 REGACSCSDYW 786
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 10/220 (4%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIE 145
P+R SL + C+ G EA+E Q + S+L C +E
Sbjct: 99 PIRSCITWSSL---ISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLE 155
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGY 204
GK++H + F + + L++MY KC A +F+ KRN W M++GY
Sbjct: 156 KGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGY 215
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVP 263
+ NG G + F MR G ++ TF + AC S A G ++ I+++ +G
Sbjct: 216 SQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANV 275
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ A++ + G L A +E M + V W ++
Sbjct: 276 FVGS--ALVDMYSKCGDLSNARRMLETMEVDDPVS-WNSM 312
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +CG++ + G +VH + S F +V + + L++MY KC + AR++ + +
Sbjct: 243 FPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETME 302
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF-----------AAC 239
+ SW+ MI G G G + L LF M D+ T+ V A
Sbjct: 303 VDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMS 362
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ VK GF ++++ N A++ + G+ A + E+M + V
Sbjct: 363 VHSLIVKTGFEAYKLVNN------------ALVDMYAKRGYFDYAFDVFEKMT-DKDVIS 409
Query: 300 WEAL 303
W +L
Sbjct: 410 WTSL 413
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +I Y ARK+F + R+ +W +ISGY G + L LF +M+ G
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYG----IVPGIEHYIAIIKVLGSAGHL 281
P++ T+ V C+ +++G ++ +K + +V G+ A K +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC------I 189
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+EAE E P + +W A+ +GD
Sbjct: 190 LEAEYLFELAPDKRNHVLWTAMVTGYSQNGD 220
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 200/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +S L +C ++ G+ ++ + S D +L +++MY KC A VFD L
Sbjct: 232 VATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWGVFDSL 291
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R L++W+ MI G+A +G+ D L LF QM G PD T L V ACA A V EG
Sbjct: 292 PARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGR 351
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
Y + + +GI P EHY ++ + G AG L EA++ ++ MP +P + V AL +I
Sbjct: 352 RYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALLGACKI 411
Query: 310 HGDVELEDRAEELLGDLDPSKA-----IVDKIPLPPR----------------KKQSATN 348
HGDV+L + + DLDP + + + + R K++ +
Sbjct: 412 HGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDERNVSKEAGRS 471
Query: 349 MLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++E ++R +L R Y + ++R GYVPDT LHD+ EE KE AL
Sbjct: 472 VIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKEAAL 531
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GL+ PR LRI KNLR+C DCH A K +S++ GRE++VRD RFHHF
Sbjct: 532 LCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVFGREIVVRDRSRFHHF 591
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 592 KDGMCSCKDYW 602
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
Query: 172 MYGKCCNTRL---ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
M G C L AR+VFD + RNL SW+ MISGY + D L +F++MR G +
Sbjct: 170 MVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGVEGN 229
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
AC A A+ G + ++ GI + A++ + G + EA
Sbjct: 230 GFVATSALVACTGAGALGRGREIYRWVEQS-GIEVDAKLATAVVDMYCKCGCVDEAWGVF 288
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+ +P + W + +HG D A EL ++ + D + L
Sbjct: 289 DSLPAR-GLTTWNCMIGGFAVHGRC---DDALELFHQMEAAGVAPDDVTL 334
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 200/367 (54%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +L +++ G H L F D + N LI+MY KC AR+VF+++ + +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW+ MI GY +G G + L LF + G PD TF+ + ++C+ + V EG L+F+
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M D+ IVP +EH I ++ +LG AG + EA F+ MPFEP V +W AL + +IH ++
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 314 ELEDRAEELLGDLDPSK----AIVDKIPLPP-----------------RKKQSATNMLEE 352
EL + + + L P ++ I KK + +E
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V + D + K++ L +M+ GY + +V D++EE KE+ L YHS
Sbjct: 659 NGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHS 718
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+G+++ P+ + KNLR+CGDCH AIK M+ I RE+ VRD RFHHF++G
Sbjct: 719 EKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGT 778
Query: 469 CSCGDYW 475
C+CGD+W
Sbjct: 779 CNCGDFW 785
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C L + G+++H + V D+ L N L+ MY KC A + FD +
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ S+ ++SG NG A L +F M+ +G PD T L V AC+ A++ GF
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ Y IV G A+I + G + A E RM V W A+
Sbjct: 435 -----SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS-WNAMIIG 488
Query: 307 AQIHG 311
IHG
Sbjct: 489 YGIHG 493
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL++C KS+ K++H+ + D + +KL +Y C LAR++FD++ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ +I YA NG + L+ M G P+K T+ V AC+ A+++G E
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG---VE 130
Query: 254 IMKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I + +G+ + A++ G L+EA+ M V W A+ ++G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV-AWNAMIAGCSLYG 189
Query: 312 DVELEDRAEELL------GDLDPSKAIVDKIP 337
L D A +L+ G S IV +P
Sbjct: 190 ---LCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + G K++ GK +H +F V + L++MY KC ARK+FD + RN
Sbjct: 216 VLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRN 275
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
SW MI GY + + L LF+QM K P T V ACA + G
Sbjct: 276 EVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C L +IE G +H + DV + L++ Y KC A+++F + R+
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +W+ MI+G + G D + L QM++ G P+ T + V A+A+ G
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG 229
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 212/367 (57%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+LD+C +L ++ GKRVH + R +V + +++MY KC A + F ++ + +
Sbjct: 72 VLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHD 131
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
SW M++ +A +G L F++M++ G P+ TF+ + +AC+ V+EG YF+
Sbjct: 132 TVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFD 191
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+M YGI P +HY ++ +LG AG+L EAE+F+ RMP P V ++L + + + DV
Sbjct: 192 LMTARYGIAPDAQHYACMVDLLGRAGYLDEAEDFLNRMPGAPHAAVLKSLLSACRSYKDV 251
Query: 314 ELEDR-AEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
+ +R A+ +L G + + I + +K + +E
Sbjct: 252 DRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEV 311
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+ RV ++ + D+ + K++ L+ M+EAGYVPDT VLHD+ EE KE+ L +HS
Sbjct: 312 EGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHS 371
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL++TP P+R+IKNLR+C DCH+A K++S I R ++ RD RFHHF +G
Sbjct: 372 EKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFENGV 431
Query: 469 CSCGDYW 475
CSCGDYW
Sbjct: 432 CSCGDYW 438
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
++ + K N LA ++F + + + W+ MI+ Y +G + LF+++ P+
Sbjct: 6 VLSAFAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIEPN 65
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
T + V ACAS A+++G I + D+G+ + AI+ + G L EA E
Sbjct: 66 SVTLMEVLDACASLAALRDGKRVHAIAR-DHGVDSEVAVATAIVDMYSKCGCLDEAVEAF 124
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVE 314
R+ TV L FAQ HG ++
Sbjct: 125 ARIERHDTVSWTAMLAAFAQ-HGHID 149
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 208/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +C +L + +G VHE + + +V L LI MY +C N AR+VFD ++
Sbjct: 215 FVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMK 274
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+ +W MISGY NG G+ + LF +MR+ G P+ TF+ V +ACA A V EG
Sbjct: 275 ERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRR 334
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQI 309
F ++ +Y +VPG+EH + ++ +LG AG L EA F+ E +P P + A+ ++
Sbjct: 335 LFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKM 394
Query: 310 HGDVELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATN 348
H + +L + E L G +D + + + + KKQ +
Sbjct: 395 HKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYS 454
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E + + D E Y + L + EAGYVP + V+H+++EE +E AL
Sbjct: 455 TVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYAL 514
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LAIA+GL+ T P+RI+KNLR+C DCH+AIK +S I RE+IVRD RFHHF
Sbjct: 515 RYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHF 574
Query: 465 RDGKCSCGDYW 475
+ G CSC DYW
Sbjct: 575 KVGSCSCLDYW 585
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S++ SC +L +++ G+ VH + F DV + L+ +YGKC + ARKVFD++R
Sbjct: 114 FTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIR 173
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W+ MISGY NG + + LF++M++TG PD TF+ V +ACA A G
Sbjct: 174 ERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCW 233
Query: 251 YFE-IMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E I+ N D +V G ++I + G++ +A E + M E V W A+
Sbjct: 234 VHEYIVGNGLDLNVVLG----TSLINMYIRCGNVSKAREVFDSMK-ERNVVAWTAM 284
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 217/371 (58%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +LL++CG+L ++++G ++ + V + + N LI M K + AR +F+ +
Sbjct: 468 YINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMV 527
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W++MI GY+ +G + L LF++M K P+ TF+ V +AC+ A V+EG
Sbjct: 528 QRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRR 587
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F + + GIVP +E Y ++ +LG AG L EAE + RMP +P +W L +I+
Sbjct: 588 FFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIY 647
Query: 311 GDVELEDRAEELLGDLDP--------------------SKAIVDKI--PLPPRKKQSATN 348
G++++ +RA E +P + A V K+ RK+Q T
Sbjct: 648 GNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCT- 706
Query: 349 MLEEKNRVSDYRSTDLYR---GE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E + ++ + D GE Y ++ L ++ GY+P T+ VLH++ E+ KE+A+
Sbjct: 707 WIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAI 766
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIAYG++S P P+RI KNLR+CGDCH+A K +SK+ GRE+I RD RFHHF
Sbjct: 767 SYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHF 826
Query: 465 RDGKCSCGDYW 475
++G CSCGDYW
Sbjct: 827 KNGVCSCGDYW 837
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 109 GKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G V+EA Q D + F +LD+C + +++GK H + FV D +
Sbjct: 141 GHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG 200
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L+ MY K + AR+VFD L KR++S++++MI GYA +G G LF +M++ G
Sbjct: 201 TALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFK 260
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P++ +FL + C++ EA+ G ++ + M G+V + A+I++ G + A
Sbjct: 261 PNRISFLSILDGCSTPEALAWGKAVHAQCMNT--GLVDDVRVATALIRMYMGCGSIEGAR 318
Query: 286 EFVERMPFEPTVEVWEALRNFAQ 308
++M V +R +A+
Sbjct: 319 RVFDKMKVRDVVSWTVMIRGYAE 341
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+LD C +++ GK VH + V DV + LI MY C + AR+VFD+++
Sbjct: 266 FLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK 325
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R++ SW +MI GYA N D LF M++ G PD+ T++ + ACAS+ +
Sbjct: 326 VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLARE 385
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++++ +G ++ A++ + G + +A + + M V W A+
Sbjct: 386 IHSQVVRAGFGTDLLVD--TALVHMYAKCGAIKDARQVFDAMSRRDVVS-WSAM 436
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++++C + + + + +H + + F D+ ++ L+ MY KC + AR+VFD + +R+
Sbjct: 370 IINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRD 429
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+ SW MI Y NG G + F M++ PD T++ + AC A+ G +Y
Sbjct: 430 VVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYT 489
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ +K D +V I A+I + G + A E M + V W + +HG+
Sbjct: 490 QAIKAD--LVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGN 546
Query: 313 ----VELEDR 318
++L DR
Sbjct: 547 AREALDLFDR 556
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ L C L+ +GK+V + + S ++ N LI+++ C N AR+ FD +
Sbjct: 64 YVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVE 123
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ + +W+ +I+GYA G + LF QM P TFL+V AC+S +K G
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLG 181
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 212/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L ++E G+ +H + + F D + N L++MY KC LAR +FD +
Sbjct: 327 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 386
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++L SW +MI+GY +G G++ + F +MR +G PD+ +F+ + AC+ + + EG+
Sbjct: 387 PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW 446
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F +M+N+ I P EHY I+ +L AG+L +A +F++ MP EP +W AL +I
Sbjct: 447 GFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 506
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ DV+L ++ E + +L+P K + ++I +K +
Sbjct: 507 YHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCS 566
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K +V + + D K +K +M+E G+ P RY L D+ KE AL
Sbjct: 567 WIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMAL 626
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+G++S PP +R+ KNLR+CGDCH K MSK+V R++I+RD+ RFHHF
Sbjct: 627 CGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHF 686
Query: 465 RDGKCSCGDYW 475
+DG CSC +W
Sbjct: 687 KDGSCSCRGHW 697
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 76/133 (57%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
+ ++ ++ + C+ G +R A+E + Q + S+L C +LKSI+ G+R+H
Sbjct: 65 DCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIH 124
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
+++++ D L +KL+ MY C + R R++FD++ + W+L+++GYA G
Sbjct: 125 SIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFR 184
Query: 212 DGLMLFEQMRKTG 224
+ L LF++MR+ G
Sbjct: 185 ESLSLFKRMRELG 197
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
++ LNN L++MY K N A +VF+ + +R++ SW MI+GYA G + LF +M
Sbjct: 258 ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME 317
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
K P+ T + ACAS A++ G ++ I++N + + + + A++ + G
Sbjct: 318 KEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGA 375
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L A + +P E + W + +HG
Sbjct: 376 LGLARLLFDMIP-EKDLVSWTVMIAGYGMHG 405
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ LL +C +L ++ GK +H L + F++DV + LI+MY K + + A KVF +++
Sbjct: 545 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 604
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ L+SW+ MI G+A G G + + +F +M+K G PD TF + +AC ++ + EG+ Y
Sbjct: 605 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 664
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M DY IVP +EHY ++ +LG AG+L EA + + MP +P +W AL +IH
Sbjct: 665 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHK 724
Query: 312 DVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNML 350
+++ + A + L L+P+ + + + + + + + +
Sbjct: 725 NLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWI 784
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ RV + S + + Y ++ L +M++ GYVPD V ++DE K+K L
Sbjct: 785 QINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLS 844
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
H+E+LAI YGLI P+R+IKN RIC DCH+A K +S + REL +RD RFHHFR+
Sbjct: 845 HTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFRE 904
Query: 467 GKCSCGDYW 475
GKCSC D+W
Sbjct: 905 GKCSCNDFW 913
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L + L + MGK H + + F DV + LI+MY K + A+ VFD ++
Sbjct: 374 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN 433
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RN+ +W+ ++SGY+ G D L L QM K G PD T+ + + A KE
Sbjct: 434 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAV 493
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
K+ G+ P + + A+I AG+ ++ +F +M
Sbjct: 494 LHQTKS-LGLTPNVVSWTALISGSSQAGNNRDSLKFFAQM 532
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +CG + ++ K++H + DV L N LI MY K LAR+VFD + RN
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
SSW+ MIS YAA G D LF ++ + PD T+ + + +E +
Sbjct: 300 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 359
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE---FVERMPFEPTVEVWEALRNFAQIH 310
M+ + G P ++++ + G L +E +V R F+ V V +L
Sbjct: 360 RMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI------ 412
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE 370
D+ +++ + L ++A+ D + N+ + VS Y ++G +E
Sbjct: 413 -DMYVKNHS------LTSAQAVFDNM--------KNRNIFAWNSLVSGYS----FKGMFE 453
Query: 371 KMKGLNGQMREAGYVPD 387
L QM + G PD
Sbjct: 454 DALRLLNQMEKEGIKPD 470
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+V+S L +C + I +G +H L F DV L L+ YG+C A +VF +
Sbjct: 134 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 193
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
+ W+ I + + G+ LF +M+ + + T + V AC A+
Sbjct: 194 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 250
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS----SWHLMISGYAANGQGADGLMLF 217
D+ N +I Y + A V Q + L+ SW +ISG + G D L F
Sbjct: 470 DLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFF 529
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
QM++ G P+ + + ACAS +++G
Sbjct: 530 AQMQQEGVMPNSASITCLLRACASLSLLQKG 560
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 208/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C ++ ++ +G VH+ + ++ DV+L LI+MY KC + + +VF + +
Sbjct: 208 SVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK 267
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W MI G A +G G D L LF +M G P++ TF+ V +C V +G YF
Sbjct: 268 DVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYF 327
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M +G+ P ++HY ++ +LG +GH+ EA++ + MPFEP +W AL +I+ +
Sbjct: 328 SSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKN 387
Query: 313 VELEDRAEELLGDLDPSK----AIVDKIPLPPRKKQSATNM-----------------LE 351
VE+ + A L LDP ++ I + M +E
Sbjct: 388 VEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIE 447
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQYH 407
+N + ++ S D +++ + G+M R+AGY P T VL DIDE++KE+AL H
Sbjct: 448 WQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEH 507
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GL++TP LRI KNLR C DCH+AIK+++ + R+LI+RD RFHHF +G
Sbjct: 508 SEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFSEG 567
Query: 468 KCSCGDYW 475
+CSC DYW
Sbjct: 568 RCSCKDYW 575
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 33/174 (18%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ----------- 209
+DV L N ++ Y AR+VFD +R+R++ SW+ MI GYA NG+
Sbjct: 104 RDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGM 163
Query: 210 --------------------GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
D L L+ +MR +PD T + V +AC+ A+ G
Sbjct: 164 DDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGA 223
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ ++++ G+ ++ A+I + G + + MP + V W ++
Sbjct: 224 EVHQFVESN-GVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK-DVLTWSSM 275
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 205/370 (55%), Gaps = 53/370 (14%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS L +C +L ++E G ++H L + F KD+ + N LI+MY KC + + AR VFD +
Sbjct: 446 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 505
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K++ SW+ MISGY+ +G ACA+A + +G
Sbjct: 506 KQDEVSWNAMISGYSMHG----------------------------LACANAGLLDQGQA 537
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M D+GI P IEHY ++ +LG GHL +A + ++ +PF+P+V VW AL IH
Sbjct: 538 YFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 597
Query: 311 GDVEL-------------EDRAEELLGD--------LDPSKAIVDKIPLPPRKKQSATNM 349
D+EL +D+A +L D ++ + KK+ +
Sbjct: 598 NDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSW 657
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V + D E + G L+ + ++AGY+P+ VL D+++E KE+ L
Sbjct: 658 IESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLW 717
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+++G+I TP P+RI+KNLRIC DCH AIK +SK+V RE++VRD RFHHF+
Sbjct: 718 VHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQ 777
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 778 EGLCSCGDYW 787
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+ +C L++ ++GK VH S + D+ + L+++Y K + AR F+++
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIP 302
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K+++ W MI+ YA + Q + + +F QMR+ P++ TF V ACA+ E + G
Sbjct: 303 KKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+++L ++ E+G +H + + + LI+ Y C +AR+VFD +
Sbjct: 141 VFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGI 200
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW M++ +A N + L LF QMR G P+ TF VF AC EA G
Sbjct: 201 LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVG 259
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 37/263 (14%)
Query: 112 REAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
+EA+E Q A F+S+L +C ++ + +G ++H + DV ++N L
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 382
Query: 170 IEMYGKCCNTRLARKVFDQLRKRN-LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+++Y KC + +F + RN ++ W+ +I G+ G G L LF M +
Sbjct: 383 MDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQAT 442
Query: 229 KETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ T+ ACAS A++ G ++ +K + I A+I + G + +A
Sbjct: 443 EVTYSSALRACASLAALEPGLQIHSLTVKTTFD--KDIVVTNALIDMYAKCGSIKDARLV 500
Query: 288 VERMPFEPTVEVWEALRNFAQIHG----DVELEDRAEELL-------------------- 323
+ M + V W A+ + +HG + L D+ +
Sbjct: 501 FDLMNKQDEVS-WNAMISGYSMHGLACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMV 559
Query: 324 ------GDLDPSKAIVDKIPLPP 340
G LD + ++D+IP P
Sbjct: 560 WLLGRGGHLDKAVKLIDEIPFQP 582
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYG 174
E++G + + +++ L C GK +H E+L+ + D+ N L+ MY
Sbjct: 26 EFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCL-DLFAWNILLNMYV 84
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
K A K+FD++ +RN S+ +I GYA + + + + LF ++ + G + F
Sbjct: 85 KSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTT 144
Query: 235 VFAACASAEAVKEGF 249
+ S + + G+
Sbjct: 145 ILKLLVSMDCGELGW 159
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 214/375 (57%), Gaps = 26/375 (6%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +SS+ + ++E GK VH + S + N +++MY K + ARKV
Sbjct: 251 ATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKV 310
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+++ ++L +W+ M++ +A G G + + FE+MRK+G + ++ TFL + AC+ V
Sbjct: 311 FERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLV 370
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
KEG YF+++K +Y + P IEHY+ ++ +LG AG L A F+ +MP EPT VW AL
Sbjct: 371 KEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLA 429
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQ 344
++H + ++ A + + LDP + + + KK+
Sbjct: 430 ACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKE 489
Query: 345 SATNMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
A + +E N V + + D R E Y+ ++ ++R+ GYVPD YVL +DE+ +
Sbjct: 490 PACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQER 549
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E LQYHSE++A+A+ LI P +RI+KN+RICGDCH+A K +SK+ RE++VRD R
Sbjct: 550 EANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNR 609
Query: 461 FHHFRDGKCSCGDYW 475
FHHF +G CSCGDYW
Sbjct: 610 FHHFSNGSCSCGDYW 624
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 95/180 (52%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + G +G ++H L + +DV + + L++MY +C +A VFD+L
Sbjct: 154 TFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKL 213
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+N SW+ +ISG+A G G LM+F +M++ G T+ +F+ A A+++G
Sbjct: 214 DSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGK 273
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K+ + + + ++ + +G +I+A + ER+ + V L FAQ
Sbjct: 274 WVHAHMVKSRQKLTAFVGN--TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ 331
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V+ + + +C K+++ +++H L +S F D L+N LI +Y KC + A KVFD++
Sbjct: 53 VYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKM 112
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF-AACASAEAVKEG 248
RK+++ SW +I+GYA N A+ + L M K P+ TF + AA A A++ G
Sbjct: 113 RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGG 172
Query: 249 FLYFEIMKNDY 259
++ +K D+
Sbjct: 173 QIHALAVKCDW 183
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 204/383 (53%), Gaps = 25/383 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M +DA SS+L C NL ++ G++VH+ + V L+ MY KC
Sbjct: 235 MVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCG 294
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A K+F ++R R++ +W+ MISGYA +G G + + LFE+M+ G P+ TF+ V
Sbjct: 295 DLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLT 354
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC G FE M+ YGI ++HY ++ +L AG L A + MPF+P
Sbjct: 355 ACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHP 414
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----------IVDKIPLPPRK---- 342
+ L N ++++ ++E + A L + +P A + ++ R
Sbjct: 415 SAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWM 474
Query: 343 ------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVL 392
K + +E + +RS D + +E++ L +M+ GYVPD + L
Sbjct: 475 KDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFAL 534
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+DE K + L HSE+LAIA+GL+ST P + LRI KNLR+CGDCH A K++SKI RE
Sbjct: 535 HDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIEDRE 594
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+I+RD RFHHFR G CSCGDYW
Sbjct: 595 IILRDTTRFHHFRSGHCSCGDYW 617
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 95 LESLDVNLLSLCKEGKVREA-IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
+ S + L L + G V EA ++ A S ++ S G++ + E E
Sbjct: 115 VTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAE------EC 168
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+ ++ L ++ Y + A + F+ + R+L SW+ +++GY N + D
Sbjct: 169 FEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDA 228
Query: 214 LMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
L +F+ M R P++ T V C++ A+ G
Sbjct: 229 LWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFG 264
>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
Length = 948
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 221/404 (54%), Gaps = 31/404 (7%)
Query: 102 LLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIE-MGKRVHELLRTS 157
+ +L + G R A+ M QD G + +L +C + +E ++VH LL
Sbjct: 546 IAALGRHGDPRGAVAMAARMQQDGWRPTGATMVG-VLAACAHAGMMEEAARKVHSLLVDG 604
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ--GAD-GL 214
F D E+ ++ MY K + + A FD++ ++ +W M+ Y G+ +D L
Sbjct: 605 GFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRAL 664
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
L M++ G PDK TF+ + ACA ++E YF+ MK DYG+VP +EHY+A++
Sbjct: 665 KLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDT 724
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL----GDLDP-- 328
+ G+L EAE+ + +P + +W AL + D R E++ LDP
Sbjct: 725 VARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLG 784
Query: 329 ------------SKAIVDKIPLPPRKKQSATNMLEEKNRVSDY----RSTDLYRGEYEKM 372
+K + + KK+ +M+ KN V + RS R Y ++
Sbjct: 785 TGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEV 844
Query: 373 KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNL 432
+ +++ GY+PDTRYVLHD+ E+ KE+ L YHSERLA+AYG ++TPP PLR+IKNL
Sbjct: 845 DRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNL 904
Query: 433 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHF-RDGKCSCGDYW 475
R+CGDCH A K+ +K++ RE+IVRDN+RFHHF +DG CSCGDYW
Sbjct: 905 RVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V + + +C ++ +E GK +H +D + L++MY +C + A VF ++
Sbjct: 475 VLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEI 534
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ + +W MI+ +G + + +M++ G P T + V AACA A ++E
Sbjct: 535 ERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAA 594
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+ D G E A++++ G + EA +++ P V+ W +
Sbjct: 595 RKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCR 653
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPL 338
G DRA +L + + DK+
Sbjct: 654 LGKYNASDRALKLARMMQQDGVMPDKVTF 682
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELL---RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
F ++LD+C NL ++E GK++ L + + + +I M+ + + LAR+ FD
Sbjct: 373 FITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFD 431
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +++++++ MI+GYA N Q + L +F++M + D V +ACAS ++E
Sbjct: 432 KISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEE 491
Query: 248 G-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
G L+ M D G+ A++ + G + +A + P W A+
Sbjct: 492 GKALHCSAM--DLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIE-RPDTIAWSAMIAA 548
Query: 307 AQIHGD 312
HGD
Sbjct: 549 LGRHGD 554
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 56/109 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++LDS L I GKR+H ++ +D + +++MY + + + A + FD++
Sbjct: 272 FVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRID 331
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ +++W ++I Y G + + E+M G P++ TF+ + C
Sbjct: 332 QPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTC 380
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 10/201 (4%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
D + +L C L+++ G RVH+ +R S + + N L+ MY N AR++FD
Sbjct: 64 DSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDG 123
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L N+ S+ ++ Y G + L + R D + A + G
Sbjct: 124 LGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLG 183
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE-PTVEV--WEALR 304
F + I + Y + G+ I++I + + G + A + +R P+ +V W +
Sbjct: 184 RFFHDTIRRCGYDLDAGVA--ISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKIL 241
Query: 305 NFAQIH----GDVELEDRAEE 321
H G ++L DR E
Sbjct: 242 AACNEHRDYIGALDLFDRMRE 262
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 6/178 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ + +++ G + + +G+ H+ +R + D + LI MY C A + FD+
Sbjct: 166 MLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRA 225
Query: 190 RKR----NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
R ++ SW +++ + L LF++MR+ G PD+ F+ V + +
Sbjct: 226 FLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDI 285
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+G M D + A++K+ G + +A +R+ +P V W L
Sbjct: 286 AQG-KRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRID-QPGVAAWTVL 341
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 202/371 (54%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C + E G+ +H + S F++ + +NN LI+ Y KC N +AR VFD +
Sbjct: 272 LTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNML 331
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+ SW MI+G A +G G + + LF +M ++ PD TF+ + AC+ A V G
Sbjct: 332 RRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCS 391
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M N YGI P IEHY ++ + G AG L +A +FV +MP P VW L IH
Sbjct: 392 YFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIH 451
Query: 311 GDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPRKKQSATNML 350
G++ L + + L +LDP A + + R K++ +
Sbjct: 452 GNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSM 511
Query: 351 EEKNR-----VSDYRSTDLYRGEYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKAL 404
E NR V+ + D+ ++K++ + ++R E GYVP+ VLHDI+ E KE ++
Sbjct: 512 IEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSV 571
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+A+G+ P +R++KNLRIC DCH +K++SK+ E++VRD RFH F
Sbjct: 572 SQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSF 631
Query: 465 RDGKCSCGDYW 475
G CSC DYW
Sbjct: 632 THGSCSCRDYW 642
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++++ N ++ Y K +LAR+VF ++ ++ SW MI G+A NG D F +
Sbjct: 200 IRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFRE 259
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+R+ G P++ + V +ACA A A + G + ++ G + I A+I G
Sbjct: 260 VRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKS-GFLQIISVNNALIDTYSKCG 318
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+L A + M V W A+ +HG E A L +++ S D I
Sbjct: 319 NLDMARLVFDNMLRRSAVS-WTAMIAGMAMHGYGE---EAIRLFNEMEESNIKPDSITF 373
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACA 240
AR++F +R ++ ++ +I G + + ++ L LF +M RK+ PD +F + A A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+ A+ G L + YG+ + +I + L+ A + + M EP + W
Sbjct: 118 NCRALTNG-LQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM-IEPNIVAW 175
Query: 301 EAL 303
A+
Sbjct: 176 NAI 178
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 206/370 (55%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+LL C L + GK +H A D+ + + L++MY KC +R VFD+L +R
Sbjct: 509 TLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRR 568
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGFLY 251
N+ +W+++I Y +G G + + LF++M G P++ TF+ AAC+ + V G
Sbjct: 569 NVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLEL 628
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM-PFEPTVEVWEALRNFAQIH 310
F M+ D+G+ P + + ++ VLG AG L EA + M P E V W +L ++H
Sbjct: 629 FHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLH 688
Query: 311 GDVELEDRAEELLGDLDPSKA--------------IVDK---IPLPPRK----KQSATNM 349
+VEL + A E L +L+P +A + DK + + R+ K+ +
Sbjct: 689 RNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSW 748
Query: 350 LEEKNRVSDY---RSTDLYRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + S+ E + M L +MR GY PDT VLHD+DE+ K L+
Sbjct: 749 IELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLR 808
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIA+GL+ PP +R+ KNLR+C DCH A K MSK+VGR++++RD +RFHHFR
Sbjct: 809 YHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFR 868
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 869 DGSCSCGDYW 878
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGK 148
G + + + + L + G+ EA+E + S D F+S L +C L+ + +G+
Sbjct: 243 GGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGR 302
Query: 149 RVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK--RNLSSWHLMISGYA 205
+H + L+ + + + + L++MY AR+VFD + + R L W+ MI GYA
Sbjct: 303 EMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYA 362
Query: 206 ANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAE 243
G + L LF +M + G P + T V ACA +E
Sbjct: 363 QAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE 401
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 32/256 (12%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRV 150
QL + + + G EA+E M +A + S +L +C + + +
Sbjct: 350 QLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAM 409
Query: 151 HELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
H + + + N L++MY + +AR++F + R++ SW+ +I+G G
Sbjct: 410 HGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHA 469
Query: 211 ADGLMLFEQMRKTGPH----------------PDKETFLVVFAACASAEAVKEGFLYFEI 254
A+ L +M+ P P+ T + + CA+ A G EI
Sbjct: 470 AEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARG---KEI 526
Query: 255 MKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ Y + +E IA+ + + G L + +R+P V W L +H
Sbjct: 527 --HGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP-RRNVITWNVLIMAYGMH 583
Query: 311 GDVELEDRAEELLGDL 326
G L D A L ++
Sbjct: 584 G---LGDEAVALFDEM 596
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 206/369 (55%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ +L +C +L + + G+ +H + + + D + N L++MY KC LA +FD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++L SW +MI+GY +G G + + LF QMR+ G D+ +F+ + AC+ + V EG+ +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F IM+++ I P +EHY I+ +L G LI+A F+E MP P +W AL +IH
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
DV+L ++ E + +L+P K + +I +K + +
Sbjct: 683 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Query: 351 EEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E K RV+ + + D E E ++ + +M E GY P T+Y L D +E KE+AL
Sbjct: 743 EIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 802
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A G+IS+ +R+ KNLR+CGDCH K MSK+ RE+++RD+ RFH F+D
Sbjct: 803 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 862
Query: 467 GKCSCGDYW 475
G CSC +W
Sbjct: 863 GHCSCRGFW 871
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+EG EA++ + DV++ ++L+ C + ++ GKRVHE ++ + D+
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N L++MY KC + + A VF ++R +++ SW+ +I GY+ N + L LF + +
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 225 PH-PDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
PD+ T V ACAS A +G ++ IM+N Y
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+ C + + I +G+ VH + + F ++ N L++MY KC + A+ VF ++ R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ S+ MI+GYA G + + LFE+M + G PD T V CA + EG
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 253 EIMK-NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E +K ND G + + A++ + G + EAE M + + W +
Sbjct: 421 EWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTI 469
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L K G +I + S+ D FS + S +L+S+ G+++H + S F +
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N L+ Y K ARKVFD++ +R++ SW+ +I+GY +NG GL +F QM
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
+G D T + VFA CA + + G
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLG 315
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 99 DVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
+ L C+ G + A++ + S+L C + KS++ GK V +R +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNG 124
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
FV D L +KL MY C + + A +VFD+++ W+++++ A +G + + LF+
Sbjct: 125 FVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYG 260
+M +G D TF V + +S +V G L+ I+K+ +G
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 227
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 216/393 (54%), Gaps = 27/393 (6%)
Query: 110 KVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
+ REA++ Q A+ S+L SC L ++E GK VH ++ V L
Sbjct: 306 RCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT 365
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
L++ Y KC + + +VF ++ +N+ SW ++I G A+NGQG L F M + P
Sbjct: 366 ALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEP 425
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ TF+ V +AC+ A V EG F M D+GI P IEHY ++ +LG AG + EA +F
Sbjct: 426 NDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQF 485
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKI------- 336
++ MP +P +W L ++H +VE+ + + + L L+P+ + ++ I
Sbjct: 486 IKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRW 545
Query: 337 --PLPPR--------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREA 382
L R KK +++E + ++ + D + Y ++ + Q++ A
Sbjct: 546 EDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSA 605
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GYVP+T D +E+ KE ++ +HSE+LAIA+GLI +PP +RI KNLR+C DCHNA
Sbjct: 606 GYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNAT 665
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SK+ RE++VRD RFHHF++G CSC DYW
Sbjct: 666 KLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G E ++ + +D S+L +CG L +E+G+ ++ + +
Sbjct: 202 KSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPT 261
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L++MY KC AR++FDQ+ +R++ +W MISGY+ + + L LF +M+K
Sbjct: 262 LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN 321
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P++ T + + ++CA A++ G +++F I K + + A++ G +
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT--VTLGTALMDFYAKCGSVES 379
Query: 284 AEEFVERMPFEPTVEVWEAL 303
+ E +MP + V W L
Sbjct: 380 SIEVFGKMPVK-NVLSWTVL 398
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L C L+++ G+++H L+ F + N LI MY C +AR+VFD++
Sbjct: 127 FPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMS 186
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+RN+ +W+ M +GY +G + + LF +M + D+ T + V AC
Sbjct: 187 ERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACG 236
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +F Q+ + + ++++MI G+ + ++LF++M + PD+ TF + C+
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+A+ EG ++ IMK +G +++ +I + + G + A + M E V W
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKN--TLIHMYANCGEVEVARRVFDEMS-ERNVRTW 193
Query: 301 EAL 303
++
Sbjct: 194 NSM 196
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 208/370 (56%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +I++G+ +H + R L LI+MY KC + A +VF+ +
Sbjct: 322 SVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMM 381
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++LSSW+ MI G+A +G+ LF +MRK G PD T + + +AC+ + + G
Sbjct: 382 HKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRH 441
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ + DY I P +EHY +I +LG AG EAEE + MP EP +W +L ++H
Sbjct: 442 IFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMH 501
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
G++EL + + L +++P + I + + KK +
Sbjct: 502 GNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSS 561
Query: 350 LEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D R Y ++ ++ + EAG+VPDT VL +++EE KE AL+
Sbjct: 562 IEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALR 621
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L ++KNLR+C +CH A K++SKI RE++ RD RFHHFR
Sbjct: 622 HHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFR 681
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 682 DGVCSCCDYW 691
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTS-AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+L +C SIE+G+ +H L+ F +++ N I +Y KC + +A +F+ L
Sbjct: 220 SVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC 279
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
+++ SW+ +I GY + L+LF++M ++G P+ T L V ACA A+ G ++
Sbjct: 280 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 339
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ I K G+ G ++I + G + A + M ++ W A+ +H
Sbjct: 340 HVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMH 398
Query: 311 G 311
G
Sbjct: 399 G 399
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK--------------- 175
F LL SC K+ E G+++H + D + LI MY +
Sbjct: 86 FPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSS 145
Query: 176 ------CC----------NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
C + R ARKVFD + +R++ SW+ MI+GY N + L LF++
Sbjct: 146 QRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKE 205
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M +T PD+ T + V +ACA + +++ G ++ + +G ++ A I + G
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
+ A E + + V W L
Sbjct: 266 DVEIASGLFEGLSCKDVVS-WNTL 288
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF+ ++ NL W+ M+ G A++ L ++ +M G P+ TF + +CA
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 242 AEAVKEGF-LYFEIMK 256
++ +EG ++ ++MK
Sbjct: 96 SKTFEEGRQIHAQVMK 111
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 210/371 (56%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SL+ + ++ + G+++H + + F D ++N L+ MY +C A + F++L
Sbjct: 452 TFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL 511
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ RN+ SW MISG A +G L LF M TG P+ T++ V +AC+ V+EG
Sbjct: 512 KDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGK 571
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M+ D+G++P +EHY ++ +L +G + EA EF+ MP + VW+ L +
Sbjct: 572 EYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRS 631
Query: 310 HGD-----------VELEDRAEE---LLGDLDPSKAIVDKIPLPPR-------KKQSATN 348
H + VELE R LL +L + D++ K++ +
Sbjct: 632 HDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691
Query: 349 MLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +N ++R+ D R + Y K+ L Q++ GYVPDT VLHD+ +E KE+ L
Sbjct: 692 WMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYL 751
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE++A+A+GLI+T P+RI KNLR+C DCH+AIK MSK RE+I+RD+ RFH
Sbjct: 752 LQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRM 811
Query: 465 RDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 812 KDGECSCGEYW 822
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 144 IEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMI 201
+ +G+ +H LLR +D + N L+ +Y +C AR VFD +R R++ SW M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
S A NG L+L +M ++G P+ T AC E + + G+
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 262 VPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + + A+I +L G L A + + + E TV VW L
Sbjct: 184 W-GTDVAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLL 225
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR---LARKVF 186
SS++ +C L S+ +G ++H L D ++ L++MY K + A KVF
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVF 315
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGPHPDKETFLVVFAACAS 241
+++ K ++ SW +ISGY +G + +M LF +M P+ T+ + +CAS
Sbjct: 316 ERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCAS 371
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + + LI+M + + ARKVFD L ++ + W L+IS Y + + LF
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEI-----MKNDYGIVPGIEHYIAIIKVLG 276
+ G PD+ T + +AC +V+ G + + +D + G+ A + G
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNI-G 305
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEAL 303
A + A + ERMP + W AL
Sbjct: 306 QA--MDYANKVFERMPKNDVIS-WTAL 329
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 212/372 (56%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L +C ++++G+ V + + V L + L+ MY +C AR FD+L+
Sbjct: 213 FVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYARCGLVSKARDWFDRLQ 272
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+ +W MI+GY +G G + + LF MR GP P+ TF+ V AACA A V EG
Sbjct: 273 ERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPNDVTFVAVLAACAHAGLVNEGRS 332
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQI 309
F+ MK YG+VP EHY +++ + G AG L +A +F+ + +P EP EVW A+ ++
Sbjct: 333 AFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIRDSIPGEPGPEVWTAMLGACKM 392
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR-KKQSATN 348
H + L E L L+P V + + R KKQ +
Sbjct: 393 HKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNVMIKRRLKKQIGYS 452
Query: 349 MLEEKNRVSDYR----STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++E +R S R Y+ ++ L ++ +AGYVP+T VLH+++EE +E AL
Sbjct: 453 LIELGGTSHLFRMGEKSHQQTREIYQYLEELIHRISDAGYVPETDSVLHELEEEEREVAL 512
Query: 405 QYHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+YHSE+LA+AYGL+ S+ P+R+IKNLRICGDCH AIK MS + RE+IVRD RFHH
Sbjct: 513 RYHSEKLAVAYGLMMSSGSTTPIRVIKNLRICGDCHLAIKFMSSVESREIIVRDKHRFHH 572
Query: 464 FRDGKCSCGDYW 475
F+DGKCSC +YW
Sbjct: 573 FKDGKCSCLEYW 584
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCG--NLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EAI + G+ +A+ + F+ + +L ++ G VH F D + L+
Sbjct: 92 EAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLLGFGSDRFVQTALV 151
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+Y KC +ARK+FD +R R++ +W+ MISGY NG + ++ +M+ PD
Sbjct: 152 VLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYREMQVAQVVPDSA 211
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFV 288
TF+ +ACA A A+ G E+ + + ++ A++ + G + +A ++
Sbjct: 212 TFVTTLSACAQAGALDLG---REVERRIVSDQMDVSVFLGSALVNMYARCGLVSKARDWF 268
Query: 289 ERMPFEPTVEVWEALRNFAQIHG 311
+R+ E V W ++ +HG
Sbjct: 269 DRLQ-ERNVVTWTSMIAGYGMHG 290
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 220/399 (55%), Gaps = 30/399 (7%)
Query: 107 KEGKVREAIEYMGQ----DASASAGYDVFSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVK 161
+ G+ EA+E Q D S L +C L ++ G+++H +LR
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+ + N LI+MY K + AR VFD + +RN SW +++GY +G+G + L +F +M+
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
K G PD TF+VV AC+ + V +G YF M D+G+VPG EHY ++ +L AG L
Sbjct: 574 KVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIP 337
EA E + MP +PT VW AL + +++ +VEL + A L +L D S ++ I
Sbjct: 634 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 693
Query: 338 LPPR-----------------KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLN 376
R KK+ + ++ + + + + D + + Y+ ++ L
Sbjct: 694 ANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 753
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
+++ GYVPD R+ LHD+D+E K L HSE+LA+AYG+++T P P+RI KNLR CG
Sbjct: 754 QRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACG 813
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH+A +S I+ E+IVRD+ RFHHF++G CSC YW
Sbjct: 814 DCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 37/267 (13%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +CG + S G VH ++ S F +V + N L+ MYG+C AR+VFD++R
Sbjct: 129 FPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMR 188
Query: 191 KR---NLSSWHLMISGYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVK 246
+R +L SW+ +++ Y G + +FE+M + G PD + + V ACAS A
Sbjct: 189 ERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWS 248
Query: 247 EGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
G + Y + G+ + A++ + G + EA + ERM + V W A
Sbjct: 249 RG-----KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS-WNA 302
Query: 303 L-RNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS 361
+ ++QI G D + + +KI R+++ N++ ++ Y
Sbjct: 303 MVTGYSQI--------------GRFDDALGLFEKI----REEKIELNVVTWSAVIAGYAQ 344
Query: 362 TDLYRGEYEKMKGLNGQMREAGYVPDT 388
L +E + QMR G P+
Sbjct: 345 RGL---GFEALDVFR-QMRLCGSEPNV 367
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 90 RGNAQLESLDVNLLSLCKEG---KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
RG L S + + + + G + + E M +D ++L +C ++ +
Sbjct: 190 RGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR 249
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK+VH S +DV + N +++MY KC A KVF++++ +++ SW+ M++GY+
Sbjct: 250 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQ 309
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
G+ D L LFE++R+ + T+ V A A E F M+ G P +
Sbjct: 310 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL-CGSEPNVV 368
Query: 267 HYIAIIKVLGSAGHLIEAEE 286
++++ AG L+ +E
Sbjct: 369 TLVSLLSGCALAGTLLHGKE 388
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
D+ + N LI+MY KC + + AR +FD + + R++ +W ++I G A +G+ + L LF Q
Sbjct: 408 DLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQ 467
Query: 220 MRKTGPH--PDKETFLVVFAACASAEAVKEG 248
M + P+ T ACA A++ G
Sbjct: 468 MLQPDNFVMPNAFTISCALMACARLGALRFG 498
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
++AS+ D+ S+L C +L S E+ +H+ L D +I MY
Sbjct: 23 STASSTTDLTSTLFHQCKSLASAEL---IHQQLLVQGLPHD---PTHIISMY---LTFNS 73
Query: 182 ARKVFDQLRKRNLSS-----WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
K LR+ + SS W+ +I G D L L+ +M++ G PD TF V
Sbjct: 74 PAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVL 133
Query: 237 AACASAEAVKEG 248
AC + + G
Sbjct: 134 KACGEIPSFRCG 145
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 225/413 (54%), Gaps = 28/413 (6%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGK 148
G+A++ S ++ + G REA + + + A ++SLLD+C NL S+ G+
Sbjct: 73 GDAKVVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGR 132
Query: 149 RVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
++H + ++ DV L ++ MY KC AR +FD++ ++N+ +W +I YA N
Sbjct: 133 KLHARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQN 192
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G + L LF +M + G + TF+ V AC+ A V + + YF MK++ + P H
Sbjct: 193 GDCSTALKLFWKMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTMKSERKLEPLPGH 252
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
Y I+ +LG AG L +AEE ++RM + +W L + HGD++L +RA E + +LD
Sbjct: 253 YGCIVDLLGRAGRLADAEELIQRMKAPQSGVLWTTLLGACKTHGDMKLAERAAERIRELD 312
Query: 328 PSKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYR 366
P A + ++ KK + + +E + ++ ++ + D
Sbjct: 313 PGSATPYVLLSNVYSEAGRWDLAASVRKRMDDMKVKKPAGKSWVEVRGKLHEFVAGDQSH 372
Query: 367 ---GEYE-KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
GE ++K L ++EAGY D LH+ +EE KE L YHSE+LA+ GL+ +P
Sbjct: 373 PKIGEIVLELKRLLALIKEAGYAADKSATLHNAEEEEKEGLLYYHSEKLAMVMGLLHSPR 432
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P++++KNLR+C DCH A K +SK+ R++++RD K+FHHF G+CSCGDYW
Sbjct: 433 GEPVQVVKNLRVCSDCHTAAKFISKVEDRQIVLRDTKQFHHFEHGRCSCGDYW 485
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M Q+ +A + S + +C L + G+++H L F D + N L++ Y KC
Sbjct: 1 MNQEGTAPNNH-TLSIAIAACSALVDLSRGRKIHASLEGCGFQADDHVKNTLMDFYTKCD 59
Query: 178 NTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
+ +KVF + + SW +I G G + F+ M G H D T+ +
Sbjct: 60 SLDDVKKVFRSMGGDAKVVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLL 119
Query: 237 AACASAEAVKEGF-LYFEIMKNDYGIVPG-IEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
AC++ ++ +G L+ I + G++ + +I+ + G L EA +R+ E
Sbjct: 120 DACSNLASLSQGRKLHARIA--ELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIG-E 176
Query: 295 PTVEVWEAL 303
+ W A+
Sbjct: 177 KNIVAWSAI 185
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 209/382 (54%), Gaps = 26/382 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A V ++ SC +L ++ MG++ HE + + ++ L +++MY +C N
Sbjct: 241 QAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNV 300
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A VF+QL ++++ W +I+G A +G L F +M K G P TF V AC
Sbjct: 301 EKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTAC 360
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ A V+ G FE MK D+G+ P +EHY ++ +LG AG L +AE+FV +MP +P +
Sbjct: 361 SHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPI 420
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM------ 349
W AL +IH +VE+ +R ++L ++ P + ++ I K + T M
Sbjct: 421 WRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKD 480
Query: 350 -----------LEEKNRVSDYRSTDLYRGEYEKMKGLN-----GQMREAGYVPDTRYVLH 393
+E +V ++ D E EK++ + +++ AGYV +T +
Sbjct: 481 KGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMF 540
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
DIDEE KE AL HSE+LAIAYG++ P+RI+KNLR+C DCH A K++SK+ EL
Sbjct: 541 DIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVEL 600
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
IVRD RFHHF++G CSC DYW
Sbjct: 601 IVRDRNRFHHFKEGTCSCMDYW 622
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L+ +C L++ MG + H F +D + N L+ MY + AR VF ++ + +
Sbjct: 123 LVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFD 182
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW MI+GY G LF++M P + T+ + + A ++ FE
Sbjct: 183 VVSWTCMIAGYHRCGDAKSARELFDRM----PERNLVTWSTMISGYARNNCFEKAVETFE 238
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLI---EAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ + G+V + +I G L +A E+V R + + A+ +
Sbjct: 239 ALQAE-GVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARC 297
Query: 311 GDVE 314
G+VE
Sbjct: 298 GNVE 301
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 225/394 (57%), Gaps = 30/394 (7%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
K + + +M Q + F+++L +C ++ ++E G VH + DV + + L
Sbjct: 1148 KAMDLVWFMMQKGQRLDSF-TFATVLSACASVATLERGMEVHACGIRACMESDVVVGSAL 1206
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++MY KC A + F+ + RN+ SW+ MISGYA +G G L LF +M G PD
Sbjct: 1207 VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 1266
Query: 230 ET-FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
L V +AC+ V+EGF +F+ M Y + P +EH+ ++ +LG AG L E +F+
Sbjct: 1267 VAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI 1326
Query: 289 ERMPFEPTVEVWEA-LRNFAQIHG-DVELEDRAEELLGDLDPSKAI-------------- 332
MP +P V +W L + +G + EL RA E+L +L+P A+
Sbjct: 1327 NSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEK 1386
Query: 333 ---VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
V K + KK++ + + K+ V + + D E Y+K++ LN +MR+
Sbjct: 1387 WEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRD 1446
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGY+P T+Y L D++ E KE+ L YHSE++A+A+ +++ +P+RI+KNLR+CGDCH+A
Sbjct: 1447 AGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSA 1505
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+SKIVGR++++RD+ RFHHF DGKCSCGDYW
Sbjct: 1506 FGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 27/240 (11%)
Query: 108 EGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
E V +A++Y + G F ++L + +L E+ ++H L+ D +
Sbjct: 1041 EASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAI 1100
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N L+ YGKC K+F ++ + R+ SW+ MISGY N + L M + G
Sbjct: 1101 GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKG 1160
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGH 280
D TF V +ACAS ++ G E+ + GI +E + A++ + G
Sbjct: 1161 QRLDSFTFATVLSACASVATLERG---MEV--HACGIRACMESDVVVGSALVDMYSKCGR 1215
Query: 281 LIEAEEFVERMPFEPTVEVW--------------EALRNFAQIHGDVELEDRAEELLGDL 326
+ A F E MP V W +AL+ F ++ D + D LLG L
Sbjct: 1216 IDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVL 1274
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 131 FSSLLDSC--GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFD 187
F S L +C ++G ++H L+ + + DV + N LI MYG C ++ AR VFD
Sbjct: 648 FGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 707
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP----HPDKETF-LVVFAACASA 242
++ RN SW+ +IS Y+ G LF M+K G P++ TF ++ AAC+S
Sbjct: 708 RIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSV 767
Query: 243 E 243
+
Sbjct: 768 D 768
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ F SL++ E + +H FV ++ L+N LI +Y + + A+K+FD+
Sbjct: 545 ETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDE 604
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ RNL +W +ISGY NG+ + F M + G P+ F AC
Sbjct: 605 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 655
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 129 DVFSSLLDSCGNLKSIEMGKR----VH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLAR 183
D + LL + +E G+R VH ++RT V + N L+ MY K A
Sbjct: 856 DSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADAC 915
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
VF+ + +++ SW+ +ISG N D F +MR+TG P T + ++CAS
Sbjct: 916 SVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLG 975
Query: 244 AVKEG 248
+ G
Sbjct: 976 WIMLG 980
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 7/206 (3%)
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
D + N+ + LD N C E E+ M + S + + + S+L SC +L I +
Sbjct: 925 DSVSWNSLISGLDQNE---CSE-DAAESFLRMRRTGSMPSNFTLISTL-SSCASLGWIML 979
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA- 205
G+++H DV ++N L+ +Y + KVF + + + SW+ +I +
Sbjct: 980 GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSD 1039
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
+ + + F +M + G + TF+ + +A +S ++ E + Y +
Sbjct: 1040 SEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSL-SLHEVSHQIHALVLKYCLSDDT 1098
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERM 291
A++ G G + E E+ RM
Sbjct: 1099 AIGNALLSCYGKCGEMNECEKIFARM 1124
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 209/369 (56%), Gaps = 28/369 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD--QLRK 191
++ +C L S +G+++H + +S D L N +++MY KC + A ++F+ +L +
Sbjct: 340 MVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGE 399
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++SSW+++ISGY +G G + L LF +M+ G P+ TF + +AC+ A + EG
Sbjct: 400 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKC 459
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M + P ++HY ++ +LG AG L EA ++++P P+ EVW AL +IHG
Sbjct: 460 FADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHG 518
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
+ EL + A L L+P + + + KK +A +++
Sbjct: 519 NTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVI 578
Query: 351 EEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E V + + D YR Y K++ L +M+ GYVPD VLHD++ E KE L Y
Sbjct: 579 EFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNY 638
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+G++ MP+++ KNLR+C DCH A K +S I GR++IVRD RFHHF+
Sbjct: 639 HSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQG 698
Query: 467 GKCSCGDYW 475
G+CSCGDYW
Sbjct: 699 GRCSCGDYW 707
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+ + G L M VH + F+ DV + N ++ MY KC N AR VFD++ +R
Sbjct: 238 SVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEER 297
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
N SW+ M+SGY NG+ D L LF QM+ + P+ T L++ +AC+
Sbjct: 298 NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSS--LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EAI+ G + F+ +L C + G+ VH + + F D+ +
Sbjct: 111 GRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE 170
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC A +VFD++ R++ W MI+ Y + LMLF +M++ G
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230
Query: 227 PDKETFLVVFAA 238
D+ T + V +A
Sbjct: 231 GDEITAISVASA 242
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV-ELNNKLIEMYGKCCNTRLARKVFDQL 189
+ LL C +L ++ K +H L T F+ +LI +Y K + AR +FD
Sbjct: 28 YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84
Query: 190 --------RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ N + M+ YA G+ + + L+ M++ G + T+ V CAS
Sbjct: 85 HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144
Query: 242 -AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
AV ++ ++++ +G +E A++ + G + +A E +RM V W
Sbjct: 145 ELGAVFGEVVHGQVVRTGFGSDLFVE--AALVDMYAKCGEIGDAHEVFDRMLIRDVV-CW 201
Query: 301 EAL 303
A+
Sbjct: 202 TAM 204
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 223/407 (54%), Gaps = 36/407 (8%)
Query: 101 NLLSLC-KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
++S C + G++ +A++Y + + + SLL + L ++E GKR+H + +
Sbjct: 236 TIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSL 295
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F L L++MY KC +R +FD++ +++ SW++MI G A +G G + L LF
Sbjct: 296 RFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALF 355
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
E+ G HP TF+ V AC+ A V EG +F++M + YGI P +EHY ++ +L
Sbjct: 356 EKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSR 415
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK----AIV 333
AG + +A E + RMP P +W ++ Q+HG +EL + L +DP+ +
Sbjct: 416 AGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQL 475
Query: 334 DKIPLPPRK-----------------KQSATNMLEEKNRVSDY--------RSTDLYRGE 368
+I RK K + +++E + RV + R+T++Y+
Sbjct: 476 ARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYK-- 533
Query: 369 YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
++ + ++ AGY + VLHDI+EE KE A++ HSERLAIA+GL+ T +RI
Sbjct: 534 --MLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKDGDCIRI 591
Query: 429 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IKNLR+CGDCH KI+S + RE+IVRD RFHHF+ G CSC DYW
Sbjct: 592 IKNLRVCGDCHEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 117 YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC 176
+M + A+ + +L +C N +I G +V + FVKDV + N LI +Y C
Sbjct: 122 HMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTC 181
Query: 177 CNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C A++VFD++ R++ SW+ MI G+ GQ + LF +M P D ++ +
Sbjct: 182 CRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEM----PEKDVISWGTI 237
Query: 236 FAACASAEAVKEGFLYFE 253
+ C +++ YF+
Sbjct: 238 ISGCVQNGELEKALDYFK 255
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 205/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +L +E GK++H + + N LI MY K N +A++VFD
Sbjct: 412 LAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPN 471
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+ + SW MI A +G G + + LFE+M G PD T++ V +AC V++G
Sbjct: 472 GKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGR 531
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
Y+ +M + I P + HY +I + G AG L EA F+E MP EP W +L +I
Sbjct: 532 KYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKI 591
Query: 310 HGDVELEDRAEELLGDLDPSK-------------------AIVDKIPLPPR--KKQSATN 348
H + +L A E L +DP A + + R +K+ +
Sbjct: 592 HKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGIS 651
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+ KN V + D+ + Y+ M + ++++ G++PDT VLHD++EE KE+ L
Sbjct: 652 WIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQIL 711
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LAIA+GL++TP LRI+KNLR+C DCH+AIK +SK+VGRE+IVRD RFHHF
Sbjct: 712 KYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHF 771
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 772 KDGSCSCRDYW 782
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 33/151 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK--------------- 175
+S+L +C NL+ + +GK++H + + + N LI MY K
Sbjct: 278 LASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNR 337
Query: 176 ------------------CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
N + AR++F++LR R++ +W MI GY NG D L LF
Sbjct: 338 TSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELF 397
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
M GP P+ T + + +S ++ G
Sbjct: 398 RLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 32/149 (21%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S++L SC +++++G+++H + V + L+ MY KC + +A+ VFD++
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 192 RNLSSWHL-------------------------------MISGYAANGQGADGLMLFEQM 220
+N+S+W+ MISGY+ G + L++F +M
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKM 265
Query: 221 -RKTGPHPDKETFLVVFAACASAEAVKEG 248
+ PD T + +ACA+ E + G
Sbjct: 266 LNEPSLKPDNFTLASILSACANLEKLNIG 294
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ F+ +L + +K G+ VH + V L N L+ Y K + R A VFD+
Sbjct: 11 EFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDE 70
Query: 189 LRKRNLSSWHLMISGYAANGQGA-------------------------------DGLMLF 217
+ ++ SW+ +ISGYA G + + +F
Sbjct: 71 MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLG 276
+M P + T V ++CA+ + + G ++ ++K G+ + +++ +
Sbjct: 131 AKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVK--LGLGSCVPVATSLLNMYA 188
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
G + A+ +RM + + W AL + G EL E + D D
Sbjct: 189 KCGDPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELAASQFEKMPDRD 238
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 216/383 (56%), Gaps = 27/383 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + Y ++S+L + L +++ G++VH + + V L N LI+MY KC +
Sbjct: 671 QREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSL 730
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAA 238
+R++FD + +R + SW+ M+ GY+ +G G + + LF+ M++ PD TFL V +
Sbjct: 731 TYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSG 790
Query: 239 CASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C+ G +++E++ G P IEHY ++ + G AG + EA EF+++MPFEPT
Sbjct: 791 CSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA 850
Query: 298 EVWEALRNFAQIHGDVEL-EDRAEELL--------------------GDLDPSKAIVDKI 336
+W +L ++H +V + E A LL G D + + + +
Sbjct: 851 AIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELM 910
Query: 337 PLPPRKKQSATNMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVL 392
K+ + +E + + ++D R E + K++ L+ +++EAGYVP+ VL
Sbjct: 911 KEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVL 970
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
+D+D+E KEK LQ HSE+LA+A+GLI TP P+RIIKNLRIC DCHN K +S++ GRE
Sbjct: 971 YDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGRE 1030
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+ +RD RFHH G CSCGDYW
Sbjct: 1031 VSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 101 NLLSLCKEGKVREAIEYMGQDA--SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
+L +LC +++EA+ MG GYD S+L C + +I G+RVH + +
Sbjct: 451 DLKTLCSNRQLKEALLEMGIQGLEVEFQGYD---SVLTECISQTAIREGQRVHAHMIKTC 507
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+ V L +LI +Y KC AR+V D++ +RN+ SW MISGY+ G ++ L LF
Sbjct: 508 YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 567
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKV 274
+M +G P++ TF V +C S+ + G ++ I E +I +++ +
Sbjct: 568 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLV-----IKTSFESHIFVGSSLLDM 622
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELED 317
AG + EA + +P V + +AQ+ D E D
Sbjct: 623 YAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 665
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+++L SC + ++G+++H L+ ++F + + + L++MY K AR+VFD L
Sbjct: 580 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 639
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ S +ISGYA G + L LF ++++ G + T+ V A + A+ G
Sbjct: 640 PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 699
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ +++ +++ ++I + G L + + MP E TV W A+
Sbjct: 700 QVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYS 756
Query: 309 IHG 311
HG
Sbjct: 757 KHG 759
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 205/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +L +E GK++H + + N LI MY K N +A++VFD
Sbjct: 412 LAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPN 471
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+ + SW MI A +G G + + LFE+M G PD T++ V +AC V++G
Sbjct: 472 GKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGR 531
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
Y+ +M + I P + HY +I + G AG L EA F+E MP EP W +L +I
Sbjct: 532 KYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKI 591
Query: 310 HGDVELEDRAEELLGDLDPSK-------------------AIVDKIPLPPR--KKQSATN 348
H + +L A E L +DP A + + R +K+ +
Sbjct: 592 HKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGIS 651
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+ KN V + D+ + Y+ M + ++++ G++PDT VLHD++EE KE+ L
Sbjct: 652 WIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQIL 711
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LAIA+GL++TP LRI+KNLR+C DCH+AIK +SK+VGRE+IVRD RFHHF
Sbjct: 712 KYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHF 771
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 772 KDGSCSCRDYW 782
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 33/151 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK--------------- 175
+S+L +C NL+ + +GK++H + + + N LI MY K
Sbjct: 278 LASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNR 337
Query: 176 ------------------CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
N + AR++F++LR R++ +W MI GY NG D L LF
Sbjct: 338 TSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELF 397
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
M GP P+ T + + +S ++ G
Sbjct: 398 RLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 32/149 (21%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S++L SC +++++G+++H + V + L+ MY KC + +A+ VFD++
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 192 RNLSSWHL-------------------------------MISGYAANGQGADGLMLFEQM 220
+N+S+W+ MISGY+ G + L +F +M
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKM 265
Query: 221 -RKTGPHPDKETFLVVFAACASAEAVKEG 248
+ PD T + +ACA+ E + G
Sbjct: 266 LNEPSLKPDNFTLASILSACANLEKLNIG 294
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ F+ +L + +K G+ VH + V L N L+ Y K + R A VFD+
Sbjct: 11 EFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDE 70
Query: 189 LRKRNLSSWHLMISGYAANGQGA-------------------------------DGLMLF 217
+ ++ SW+ +ISGYA G + + +F
Sbjct: 71 MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLG 276
+M P + T V ++CA+ + + G ++ ++K G+ + +++ +
Sbjct: 131 AKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVK--LGLGSCVPVATSLLNMYA 188
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
G + A+ +RM + + W AL + G EL E + D D
Sbjct: 189 KCGDPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELAASQFEKMPDRD 238
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 216/383 (56%), Gaps = 27/383 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + Y ++S+L + L +++ G++VH + + V L N LI+MY KC +
Sbjct: 204 QREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSL 263
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAA 238
+R++FD + +R + SW+ M+ GY+ +G G + + LF+ M++ PD TFL V +
Sbjct: 264 TYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSG 323
Query: 239 CASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C+ G +++E++ G P IEHY ++ + G AG + EA EF+++MPFEPT
Sbjct: 324 CSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA 383
Query: 298 EVWEALRNFAQIHGDVEL-EDRAEELL--------------------GDLDPSKAIVDKI 336
+W +L ++H +V + E A LL G D + + + +
Sbjct: 384 AIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELM 443
Query: 337 PLPPRKKQSATNMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVL 392
K+ + +E + + ++D R E + K++ L+ +++EAGYVP+ VL
Sbjct: 444 KEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVL 503
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
+D+D+E KEK LQ HSE+LA+A+GLI TP P+RIIKNLRIC DCHN K +S++ GRE
Sbjct: 504 YDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGRE 563
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+ +RD RFHH G CSCGDYW
Sbjct: 564 VSLRDKNRFHHIVGGTCSCGDYW 586
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
GYD S+L C + +I G+RVH + + + V L +LI +Y KC AR+V
Sbjct: 12 GYD---SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVL 68
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D++ +RN+ SW MISGY+ G ++ L LF +M +G P++ TF V +C S+ +
Sbjct: 69 DEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQ 128
Query: 247 EGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
G ++ I E +I +++ + AG + EA + +P V
Sbjct: 129 LGRQIHSLV-----IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183
Query: 303 LRNFAQIHGDVELED 317
+ +AQ+ D E D
Sbjct: 184 ISGYAQLGLDEEALD 198
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+++L SC + ++G+++H L+ ++F + + + L++MY K AR+VFD L
Sbjct: 113 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 172
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ S +ISGYA G + L LF ++++ G + T+ V A + A+ G
Sbjct: 173 PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 232
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ +++ +++ ++I + G L + + MP E TV W A+
Sbjct: 233 QVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYS 289
Query: 309 IHG 311
HG
Sbjct: 290 KHG 292
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 207/370 (55%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +C +L + +G VHE + +V L LI MY +C N AR+VFD ++
Sbjct: 215 FVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 274
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+ +W MISGY NG G+ + LF +MR+ G P+ TF+ V +ACA A V EG
Sbjct: 275 ERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRR 334
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
FE M+ +Y +VP +EH++ ++ +LG AG L EA F++ + EP +W A+ ++H
Sbjct: 335 VFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMH 394
Query: 311 GDVELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSATNM 349
+ L + E L G +D + + D + KKQ +
Sbjct: 395 KNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYST 454
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ + + D E Y + L + REAGYV + V+H+++EE +E AL
Sbjct: 455 IDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALG 514
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIA+GL+ T +RI+KNLR+C DCH+AIK +S I RE+IVRD RFHHF+
Sbjct: 515 YHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFK 574
Query: 466 DGKCSCGDYW 475
+G CSC DYW
Sbjct: 575 NGSCSCLDYW 584
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 14/179 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC---CNTRLARKVFD 187
F+S++ SC +L ++ G+ +H + + F DV + L+ YGKC CN ARKVFD
Sbjct: 114 FTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCN---ARKVFD 170
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++R R++ +W+ MISGY NG + + LF++M++ G P+ TF+ V +ACA A
Sbjct: 171 KMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFIL 230
Query: 248 GFLYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G E D +V G ++I + G++ +A E + M E V W A+
Sbjct: 231 GCWVHEYAVGNGLDLNVVLG----TSLINMYTRCGNVSKAREVFDSMK-ERNVVAWTAM 284
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 206/369 (55%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ +L +C +L + + G+ +H + + + D + N L++MY KC LA +FD +
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 411
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++L SW +MI+GY +G G + + LF QMR+ G D+ +F+ + AC+ + V EG+ +
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 471
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F IM+++ I P +EHY I+ +L G LI+A F+E MP P +W AL +IH
Sbjct: 472 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 531
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
DV+L ++ E + +L+P K + +I +K + +
Sbjct: 532 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 591
Query: 351 EEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E K RV+ + + D E E ++ + +M E GY P T+Y L D +E KE+AL
Sbjct: 592 EIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 651
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A G+IS+ +R+ KNLR+CGDCH K MSK+ RE+++RD+ RFH F+D
Sbjct: 652 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 711
Query: 467 GKCSCGDYW 475
G CSC +W
Sbjct: 712 GHCSCRGFW 720
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+EG EA++ + DV++ ++L+ C + ++ GKRVHE ++ + D+
Sbjct: 223 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 282
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N L++MY KC + + A VF ++R +++ SW+ +I GY+ N + L LF + +
Sbjct: 283 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 342
Query: 225 PH-PDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY 259
PD+ T V ACAS A +G ++ IM+N Y
Sbjct: 343 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 379
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+ C + + I +G+ VH + + F ++ N L++MY KC + A+ VF ++ R
Sbjct: 150 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 209
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ S+ MI+GYA G + + LFE+M + G PD T V CA + EG
Sbjct: 210 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 269
Query: 253 EIMK-NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E +K ND G + + A++ + G + EAE M + + W +
Sbjct: 270 EWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTI 318
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L K G +I + S+ D FS + S +L+S+ G+++H + S F +
Sbjct: 19 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 78
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N L+ Y K ARKVFD++ +R++ SW+ +I+GY +NG GL +F QM
Sbjct: 79 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 138
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
+G D T + VFA CA + + G
Sbjct: 139 SGIEIDLATIVSVFAGCADSRLISLG 164
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 209/369 (56%), Gaps = 28/369 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD--QLRK 191
++ +C L S +G+++H + +S D L N +++MY KC + A ++F+ +L +
Sbjct: 309 MVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGE 368
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++SSW+++ISGY +G G + L LF +M+ G P+ TF + +AC+ A + EG
Sbjct: 369 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKC 428
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M + P ++HY ++ +LG AG L EA ++++P P+ EVW AL +IHG
Sbjct: 429 FADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHG 487
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
+ EL + A L L+P + + + KK +A +++
Sbjct: 488 NTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVI 547
Query: 351 EEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E V + + D YR Y K++ L +M+ GYVPD VLHD++ E KE L Y
Sbjct: 548 EFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNY 607
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+G++ MP+++ KNLR+C DCH A K +S I GR++IVRD RFHHF+
Sbjct: 608 HSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQG 667
Query: 467 GKCSCGDYW 475
G+CSCGDYW
Sbjct: 668 GRCSCGDYW 676
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
AR VFD++ +RN SW+ M+SGY NG+ D L LF QM+ + P+ T L++ +AC+
Sbjct: 256 ARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSS--LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EAI+ G + F+ +L C + G+ VH + + F D+ +
Sbjct: 111 GRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE 170
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC A +VFD++ R++ W MI+ Y + LMLF +M++ G
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230
Query: 227 PDKETFLVVFAACASA----EAVKEGFLYFEIMKNDYGI 261
D+ T + V +A A+ L F+ M+ GI
Sbjct: 231 GDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGI 269
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 215/396 (54%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G A+E+ + + A A F S + SC +L ++ G+++H L + K V
Sbjct: 144 QNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVP 203
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MY +C + +V + +L MIS Y +G G + LF+QM G
Sbjct: 204 VMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAG 263
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ TFL + AC+ + EG FE+M YG+ P ++HY I+ +LG +G L EA
Sbjct: 264 AEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 323
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI------------ 332
E+ + MP +P +W+ L + + ++ +R E + +LDP +
Sbjct: 324 EDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATS 383
Query: 333 -----VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQM 379
V K+ R +K+ + +E K ++ + + D R E ++ + ++
Sbjct: 384 SRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRI 443
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R+ GY PD V HD+++E KE +L +HSE+LAIA+ +S P +P+R++KNLR+C DCH
Sbjct: 444 RQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCH 503
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK+MSK++GRE++VRD RFHHF+DGKCSCGDYW
Sbjct: 504 VAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SL C L+ + G++VH + S +D+ + + L MY +C R L
Sbjct: 69 LGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALP 128
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ S + ISG NG L F MR G + TF+ +C+ A+ +G
Sbjct: 129 SLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG 186
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI Y K + ARK+FD++ RN+++W+ M++G +G + L F MR+ G
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 227 PDKETFLVVFAACASAEAVKEG 248
PD+ +F CA V G
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSG 85
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 199/370 (53%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+LL C L + GK +H A D+ + + L++MY KC LAR VFD+L +R
Sbjct: 492 TLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRR 551
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGFLY 251
N+ +W+++I Y +G G + L LF++M G P++ TF+ AAC+ + V G
Sbjct: 552 NVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLEL 611
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM-PFEPTVEVWEALRNFAQIH 310
F+ MK DYG P + ++ VLG AG L EA + M P E V W + ++H
Sbjct: 612 FQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLH 671
Query: 311 GDVELEDRAEELLGDLDPSKA--------IVDKIPLPPRK-------------KQSATNM 349
+V+L A E L +L+P +A I L K+ +
Sbjct: 672 RNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSW 731
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + + + E + M L +MR GYVPDT VLHD+DE K L+
Sbjct: 732 IELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLR 791
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIA+GL+ PP +R+ KNLR+C DCH A K +S++VGRE+++RD +RFHHFR
Sbjct: 792 YHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFR 851
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 852 DGTCSCGDYW 861
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGK 148
G L + + + L + G+ EA++ + + D F+S L +C L+ + +G+
Sbjct: 221 GVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGR 280
Query: 149 RVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYA 205
VH +L+ + + + L++MY AR+VFD + R L W+ MI GYA
Sbjct: 281 EVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYA 340
Query: 206 ANGQGAD--GLMLFEQMR-KTGPHPDKETFLVVFAACASAE 243
+G G D + LF +M + G P + T V ACA +E
Sbjct: 341 QHG-GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSE 380
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 69 SSNEQEPKTGTGHSQNTND--PLRGNAQLESLDVNLLSLCKEGKV-REAIEY---MGQDA 122
+SNEQ H++ D P G QL + + + G + EAIE M +A
Sbjct: 307 ASNEQ-----VSHARRVFDMVPEHGR-QLGMWNAMICGYAQHGGMDEEAIELFSRMEAEA 360
Query: 123 SASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
+ + +L +C + + VH + + + N L++MY + A
Sbjct: 361 GCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEA 420
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
+F + R++ SW+ +I+G G ++ L +M+ ET L
Sbjct: 421 HTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETML 471
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 206/377 (54%), Gaps = 35/377 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQL 189
F + +C NL S GK+ H L S + + +NN L+ MY KC N + ARK+F ++
Sbjct: 347 FVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRM 406
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N + + +I+GYA +G G + L LFEQM P T + + +ACA V+EG
Sbjct: 407 PQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGK 466
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MK+ +GI P EHY +I +LG AG L EAE ++ MPF P W AL +
Sbjct: 467 KYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRK 526
Query: 310 HGDVELEDRAEELLGDLDPSKAI----VDKIPLPPRK-----------------KQSATN 348
+G++EL ++A L+P+ A+ + + RK K+ +
Sbjct: 527 YGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCS 586
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKGLNG-------QMREAGYVPDTRYVLHDID---EE 398
+E RV + + D + ++K ++ +M+ AGYVPD R+ D E+
Sbjct: 587 WIELNKRVHVFVAED---NSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQ 643
Query: 399 AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
KE L +HSE+LA+A+GL+ T PL ++KNLRICGDCHNAIK MS I R++ VRD
Sbjct: 644 EKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDA 703
Query: 459 KRFHHFRDGKCSCGDYW 475
RFH F DG+CSCGDYW
Sbjct: 704 YRFHCFEDGRCSCGDYW 720
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-CNTRLARKV 185
D+F+ S+L + ++ + G + H + F K+ + + LI+MY KC +RKV
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299
Query: 186 FDQLRKRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
F+++ +L W+ MISGY+ N + + L F QM++ G PD +F+ +AC++ +
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSS 359
Query: 245 VKEGFLYFEI-MKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+G + + MK++ +P + + A++ + G+L +A + +RMP TV +
Sbjct: 360 PSQGKQFHALAMKSE---IPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNS 416
Query: 302 ALRNFAQIHG 311
+ +AQ HG
Sbjct: 417 IIAGYAQ-HG 425
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 31/142 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-------------- 176
F +L SC K + GK +H + S L+N I +Y KC
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70
Query: 177 -----------------CNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
+A +FDQ+ + +L S++ +I+ YA G L LF +
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 220 MRKTGPHPDKETFLVVFAACAS 241
MR+ G D TF V AC +
Sbjct: 131 MREMGLVMDGFTFSGVITACCN 152
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FS ++ +C N + + +++H L +S F V + N L+ Y K A VF+ +
Sbjct: 142 TFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGM 199
Query: 190 RK--RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ R+ SW+ MI Y + +G L L+ M G D T V + E +
Sbjct: 200 GEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSG 259
Query: 248 GFLY 251
G +
Sbjct: 260 GLQF 263
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 201/370 (54%), Gaps = 26/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR- 190
S +L +CG L ++E GK H + DV L LI+MY KC + A VF L
Sbjct: 172 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 231
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ +W MISG A +G + + LF +M G P+ TFL VF AC V EG
Sbjct: 232 NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD 291
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y M DY I+P I+HY ++ + G AG + EA V+ MP EP V VW AL + +++H
Sbjct: 292 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 351
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
GD+E + A + L +L+P+ + + D + KK ++
Sbjct: 352 GDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL 411
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKALQ 405
+E + ++ D E ++ + ++ E GYV +T+ VL D+DEE KE AL
Sbjct: 412 IEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALS 471
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+AYG + T P P+RI+KNLRIC DCH AIK++SK+ RE+IVRD RFHHF
Sbjct: 472 LHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFT 531
Query: 466 DGKCSCGDYW 475
G CSC DYW
Sbjct: 532 QGLCSCRDYW 541
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ F LL S + + +G+ VH + D + LI MY +AR +F
Sbjct: 64 FHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFA 123
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH---PDKETFLVVFAACASAEA 244
+ +RN+ SW MI+GY GQ + L LF +M+ G + P++ T V AAC A
Sbjct: 124 VMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGA 183
Query: 245 VKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
++ G Y + +V G A+I + G + +A + V W
Sbjct: 184 LEHGKWAHAYIDKCGMPVDVVLG----TALIDMYAKCGSVEKATWVFSNLGPNKDVMAWS 239
Query: 302 ALRNFAQIHGDVE 314
A+ + +HG E
Sbjct: 240 AMISGLAMHGLAE 252
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 197/373 (52%), Gaps = 33/373 (8%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L SC ++++G+ VH + N L+ MY K AR VFD +
Sbjct: 153 AAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAKTGALHDARAVFDAMPA 212
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R +W +I GYA NG+G L ++ M ++G PD TF+ + AC+ A V G +
Sbjct: 213 RCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLFACSHAGLVDAGRDH 272
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M DYGI PG +HY ++ +LG AG L EA + + R E VW++L ++H
Sbjct: 273 FRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLLGACRVHR 332
Query: 312 DVELEDRAEELLGDLDPSKAI--------------------------VDKIPLPPRKKQS 345
+ EL +RA E++ LDP+ A+ I P
Sbjct: 333 NAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALMKARGITKEPGCSWV 392
Query: 346 ATNMLEEKNRVSDY---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
N + V D R+ ++YR K++ + ++R GYVPDT + L D E +E+
Sbjct: 393 GVNGVTHLFHVEDRGHPRAAEIYR----KVEEMTERIRAEGYVPDTDWALQDEAPEGRER 448
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L YHSERLA+A+GL++ P P+R+ KNLR+CGDCH AIK+++K GR +I+RD FH
Sbjct: 449 GLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKAYGRVIILRDANCFH 508
Query: 463 HFRDGKCSCGDYW 475
H +DG+CSCGDYW
Sbjct: 509 HMKDGECSCGDYW 521
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 201/370 (54%), Gaps = 26/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-R 190
S +L +CG L ++E GK H + DV L LI+MY KC + A VF L
Sbjct: 203 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 262
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ +W MISG A +G + + LF +M G P+ TFL VF AC V EG
Sbjct: 263 NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD 322
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y M DY I+P I+HY ++ + G AG + EA V+ MP EP V VW AL + +++H
Sbjct: 323 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 382
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
GD+E + A + L +L+P+ + + D + KK ++
Sbjct: 383 GDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL 442
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKALQ 405
+E + ++ D E ++ + ++ E GYV +T+ VL D+DEE KE AL
Sbjct: 443 IEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALS 502
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+AYG + T P P+RI+KNLRIC DCH AIK++SK+ RE+IVRD RFHHF
Sbjct: 503 LHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFT 562
Query: 466 DGKCSCGDYW 475
G CSC DYW
Sbjct: 563 QGLCSCRDYW 572
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ F LL S + + +G+ VH + D + LI MY C N AR+VFD
Sbjct: 64 FHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFD 123
Query: 188 QLRK-------------------------------RNLSSWHLMISGYAANGQGADGLML 216
++ + RN+ SW MI+GY GQ + L L
Sbjct: 124 EIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALAL 183
Query: 217 FEQMRKTGPH---PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
F +M+ G + P++ T V AAC A++ G + + G+ + A+I
Sbjct: 184 FREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHG-KWAHAYIDKCGMPVDVVLGTALID 242
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G + +A + V W A+ + +HG E
Sbjct: 243 MYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAE 283
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 202/365 (55%), Gaps = 27/365 (7%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLS 195
C ++ G+ VH + S D +L +++MY KC A +VF+ L + L+
Sbjct: 241 CTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLT 300
Query: 196 SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
+W+ MI G+A +G+G D L LF +M + G PD T + V ACA A + EG YF +
Sbjct: 301 TWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYV 360
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
YGI P +EHY ++ + G AG L EA++ ++ MP EP V V AL ++IHGDV+L
Sbjct: 361 PQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDL 420
Query: 316 EDRAEELLGDLDPSKA-----IVDKIPLPPR----------------KKQSATNMLEEKN 354
+ + +LDP + + + + R K++ +++E +
Sbjct: 421 GEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQG 480
Query: 355 RVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQYHSER 410
V +++ L E++ + M R GYVPDTR VLH I EE KE L YHSE+
Sbjct: 481 EVCEFQCGGLCHPRAEEVYAMASDMMRKIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEK 540
Query: 411 LAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCS 470
LAIA+GL+ T P +RI KNLR+C DCH A K +S++ R+++VRD RFHHF+DG+CS
Sbjct: 541 LAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCS 600
Query: 471 CGDYW 475
C DYW
Sbjct: 601 CKDYW 605
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FD + +RNL SW+ M+SGY + D L +F++MR G + AC
Sbjct: 184 ARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTG 243
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT-VEVW 300
A A+ G ++ GI + A++ + G + EA E +P + W
Sbjct: 244 AGALARGREVHRWVEQS-GIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTW 302
Query: 301 EALRNFAQIHG 311
+ +HG
Sbjct: 303 NCMIGGFAVHG 313
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 196/370 (52%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ LL++ + ++ G +H + V + N LI MY KC + VF +R
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR 390
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ MI GY+ +G G L+LF+ M G P+ TF+ V +ACA V EGF
Sbjct: 391 NRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFY 450
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + + + PG+EHY ++ VL AG L EAE F+ + V W L N IH
Sbjct: 451 YLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
+ L + E + +DP + ++ + R KK+ +
Sbjct: 511 RNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSW 570
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N V + S E Y K++ L +++ GYVP+ VLHD+++E KE L
Sbjct: 571 IEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLN 630
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIAYGL+ P P+R+IKNLRIC DCH A+K++SK+ R +IVRD RFHHFR
Sbjct: 631 YHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFR 690
Query: 466 DGKCSCGDYW 475
DG C+C D+W
Sbjct: 691 DGTCTCTDHW 700
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 80 GHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDS 137
G+ N ND N+ L +L + G++ EA+E +G+ +D + S++
Sbjct: 184 GNIDNDNDAFCYNSVLNAL-------VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGL 236
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG ++ + +G +VH L DV + + L++M+GKC + ARKVFD L+ RN+ W
Sbjct: 237 CGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVW 296
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ Y NG+ + L L M + G ++ TF V+ A A A++ G
Sbjct: 297 TSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG 347
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 139 GNLKSIEMGKRVHELL----RTSAFVKDVELN----NKLIEMYGKCCNTRLARKVFDQLR 190
N K++ GK +H L ++S E N N LI +Y KC RLAR +FD++
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ S+++++ GY +G+ + + LF+ M + P++ F V +ACA + V EG
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEG 140
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 217/398 (54%), Gaps = 29/398 (7%)
Query: 107 KEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
K GK EA+ E M + +S S+L +C +L ++E GK +H +
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + + L+ MYG+C + ++VFD++ R++ SW+ +IS Y +G G + +FE+M
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
G P TF+ V AC+ V+EG FE M D+GI P IEHY ++ +LG A L
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----------- 331
EA + V+ M EP +VW +L +IHG+VEL +RA L L+P A
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYA 499
Query: 332 ---IVDKIPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNG 377
+ D++ + +K +E + ++ + S D + E++ L
Sbjct: 500 EAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAE 559
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
M+E GY+P T+ VL++++ E KE+ + HSE+LA+A+GLI+T P+RI KNLR+C D
Sbjct: 560 DMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCED 619
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CH K +SK + +E++VRD RFH F++G CSCGDYW
Sbjct: 620 CHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLCKEGK+++AI + Q++S S + L+ CG+ S+ RVH + + +D
Sbjct: 55 SLCKEGKLKQAIRVLSQESSPSQ--QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDP 112
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI MY + ARKVFD+ RKR + W+ + G G + L L+ +M +
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 224 GPHPDKETFLVVFAACASAEA 244
G D+ T+ V AC ++E
Sbjct: 173 GVESDRFTYTYVLKACVASEC 193
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H L + V + L++MY + A VF + RN+ SW MI+ YA
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 207 NGQGADGLMLF-EQMRKT-GPHPDKETFLVVFAACASAEAVKEGFLY--FEIMKNDYGIV 262
NG+ + L F E MR+T P+ T + V ACAS A+++G L + + + I+
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
P I A++ + G G L + +RM + V W +L + +HG
Sbjct: 321 PVIS---ALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 200/367 (54%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L SC L ++E+G L+ + F+ + L LI+MY KC A +VF +RK++
Sbjct: 316 VLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKD 375
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
W+ ISG A +G D L LF QM K+G PD+ TF+ + AC A V+EG YF
Sbjct: 376 RVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFN 435
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M+ + + P IEHY ++ +LG AG L EA + ++ MP E VW AL ++H D
Sbjct: 436 SMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDT 495
Query: 314 ELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSATNM-----------------LEE 352
+L + + L L+P + ++ I K + A + +E
Sbjct: 496 QLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEV 555
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V + D L Y K+ L ++ AGYVP T +VL DI+EE KE + HS
Sbjct: 556 DGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHS 615
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GLIST P + ++KNLR+CGDCH AIK +S+I GRE+IVRDN RFH F DG
Sbjct: 616 EKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGL 675
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 676 CSCKDYW 682
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK REAI+ + D FS +L +C + G+ + E + + V++V +
Sbjct: 188 GKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVA 247
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++ YGKC N AR VFD + ++N+ SW MI GYA+NG + L LF +M G
Sbjct: 248 TALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLK 307
Query: 227 PDKETFLVVFAACASAEAVKEG 248
PD + V +CA A++ G
Sbjct: 308 PDCYAMVGVLCSCARLGALELG 329
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C + E+G ++H L+ + D + LI +Y KC A KVFD +
Sbjct: 111 FPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N +SW ISGY G+ + + +F ++ + G PD + + V +AC ++ G
Sbjct: 171 DKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEW 230
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E + + G+V + A++ G G++ A + M E + W ++
Sbjct: 231 IDEYITEN-GMVRNVFVATALVDFYGKCGNMERARSVFDGM-LEKNIVSWSSM 281
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K +H L +D L NK++ NT + ++ DQ ++ N+ ++ MI G N
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ + ++ MRK G PD TF V ACA
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACA 119
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/407 (37%), Positives = 228/407 (56%), Gaps = 29/407 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-EL 153
S +V + + G +EA+E Q A Y S+L + L ++E+GK VH
Sbjct: 226 SWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYA 285
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+R + V DV L + LI+MY KC + A +VF+ L KRN+ +W +I+G A +G+ D
Sbjct: 286 VRNNIGVDDV-LGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDT 344
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
L FE M + G P T++ + +AC+ A V EG +F+ M G+ P IEHY ++
Sbjct: 345 LDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVD 404
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-- 331
+LG AG L E+EE + MP +P +W+AL ++HG+VE+ R E L +L P +
Sbjct: 405 LLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGS 464
Query: 332 ---------------IVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKM 372
V K+ L + +K + +E + ++ D + +K+
Sbjct: 465 YVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKI 524
Query: 373 KGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
+ +M GY P+T VL ++DEE KE +L YHSE++AIA+GLIST P+ PLRI
Sbjct: 525 HSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRI 584
Query: 429 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLRIC DCH++IK++SKI R++IVRD KRFHHF +G CSC DYW
Sbjct: 585 TKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV L N +I+ Y + +AR +FD++ +R++ SW++MI+GYA +G + + +F +M+
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P+ T + V A + A++ G +++ ++N+ G+ + A+I + G
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGS--ALIDMYAKCGS 309
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ +A + E +P + V W + +HG
Sbjct: 310 IEKALQVFEGLP-KRNVVTWSTIIAGLAMHG 339
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHL 199
K+++ K++H + +A ++D +L+ + L ARK+F + + N S++
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNT 81
Query: 200 MISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+I + + D L++F E + P+ TF VF AC AE ++EG
Sbjct: 82 LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREG 131
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 213/396 (53%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K ++ EA+E + + D S+L +C + + MGK +H + D+
Sbjct: 557 KNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLA 616
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N L++MY KC L+R VFD + +++ SW+ MI +G G + L LFE+M +
Sbjct: 617 RTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSM 676
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD TF V +AC+ + V+EG F M D+ + P EHY ++ + AG L EA
Sbjct: 677 VKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEA 736
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----------IVD 334
F++RMP EPT W+A +++ +VEL + + L ++DP+ + +
Sbjct: 737 YGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTA 796
Query: 335 KIPLPPRK-----------KQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQM 379
K+ K K + NRV + + D E +K+ L ++
Sbjct: 797 KLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKI 856
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ AGY PDT YVLHDID+E K ++L HSE+LA+A+G+++ + +R+ KNLRICGDCH
Sbjct: 857 KAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCH 916
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
NAIK MS +VG ++VRD+ RFHHF++G CSC D+W
Sbjct: 917 NAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C LK ++ GK +H V+DV + L+ +Y C R A+ VFD +
Sbjct: 347 SSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPH 406
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ +W+ + S Y G GL +F +M G PD T L + AC+ + +K G
Sbjct: 407 RNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L+ ++ GK +H V+DV + N L+ +Y KC R A+ VFD + R
Sbjct: 449 SILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHR 508
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++SW+ +++ Y N + GL +F QM + D+ T+ VV C ++E F
Sbjct: 509 EVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIF 568
Query: 253 EIMKN 257
M+
Sbjct: 569 RKMQT 573
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L C +L+ ++ GK +H + V+DV +++ + Y KC R A+ VFD +
Sbjct: 145 SSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPH 204
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
R++ +W+ + S Y G GL +F +M G PD T + +AC+ + +K G +
Sbjct: 205 RDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAI 264
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +K +G+V + A++ + S + EA+ + MP + W +L
Sbjct: 265 HGFALK--HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVI-TWNSL 314
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S +L +C +L+ ++ GK +H V++V ++N L+ +Y C R A+ VFD +
Sbjct: 246 SCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPH 305
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RN+ +W+ + S Y G GL +F +M G PD + AC+ + +K G
Sbjct: 306 RNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KT 364
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+G+V + A++ + + + EA+ + MP V W +L
Sbjct: 365 IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVV-TWNSL 415
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF ++ +C + K+ H+ + DV + N I YGKC AR+VFD L
Sbjct: 42 VFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDL 101
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ +W+ + + Y G GL +F +M + T + C+ + +K G
Sbjct: 102 VARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGK 161
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +++ +G+V + A + + EA+ + MP V W +L
Sbjct: 162 EIHGFVVR--HGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVV-TWNSL 213
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 215/396 (54%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G A+E+ + + A A F S + SC +L ++ G+++H L + K V
Sbjct: 252 QNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVP 311
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MY +C + +V + +L MIS Y +G G + LF+QM G
Sbjct: 312 VMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAG 371
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ TFL + AC+ + EG FE+M YG+ P ++HY I+ +LG +G L EA
Sbjct: 372 AEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 431
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI------------ 332
E+ + MP +P +W+ L + + ++ +R E + +LDP +
Sbjct: 432 EDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATS 491
Query: 333 -----VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQM 379
V K+ R +K+ + +E K ++ + + D R E ++ + ++
Sbjct: 492 SRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRI 551
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R+ GY PD V HD+++E KE +L +HSE+LAIA+ +S P +P+R++KNLR+C DCH
Sbjct: 552 RQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCH 611
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK+MSK++GRE++VRD RFHHF+DGKCSCGDYW
Sbjct: 612 VAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SL C L+ + G++VH + S +D+ + + L MY +C R L
Sbjct: 177 LGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALP 236
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ S + ISG NG L F MR G + TF+ +C+ A+ +G
Sbjct: 237 SLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG 294
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N LI Y K + ARK+FD++ RN+++W+ M++G +G + L F M
Sbjct: 106 RNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 165
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ G PD+ +F CA V G
Sbjct: 166 RREGMQPDEYGLGSLFRCCAGLRDVVSG 193
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 101 NLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV 160
+++ LC G+V+EA+ ++ S +FS + +C +++ + +++H TS
Sbjct: 19 DIIRLCSTGRVKEALHRRFREGLWSEP-GLFSHIFRAC---QALPLLRQLHAFAATSGAA 74
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
D N L+ Y + AR +F+++ KRN+ SW+++I GY NG LF++M
Sbjct: 75 ADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEM 134
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
P + T+ + A ++ +E +F M+ + G+ P
Sbjct: 135 ----PARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE-GMQP 172
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 217/416 (52%), Gaps = 34/416 (8%)
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSI 144
DP+ NA + + G+ REA+ Q S+L +C +L ++
Sbjct: 207 DPIAWNAMISGY-------VQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGAL 259
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
+ G+ H + + + L LI+MY KC N A +VF ++++N+ +W I G
Sbjct: 260 DQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGL 319
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
A NG G L LF M++ P++ TF+ V C+ V+EG +FE M YGI P
Sbjct: 320 AMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPR 379
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE--- 321
+EHY ++ + G AGHL EA F+ MP P V W AL N +I+ ++E+ + A
Sbjct: 380 LEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIV 439
Query: 322 -----------LLG-------DLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD 363
LL D D + + + +KQ +++E V ++ D
Sbjct: 440 ELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGD 499
Query: 364 LYRGEYEKMKGLNGQ----MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIS 419
Y +++ + G+ ++ +GYV +T V DI+EE KE AL HSE++AIA+GLIS
Sbjct: 500 KSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLIS 559
Query: 420 TPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P +P+RI+KNLR+C DCH+A K++SK RE++VRD RFHHFRDG+CSC YW
Sbjct: 560 LSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ ++ K + ARK+FD++ ++ +W+ MISGY GQ + L LF M+
Sbjct: 176 DLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQ 235
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+ G ++ + + V +AC+ A+ +G Y E K + G A+I +
Sbjct: 236 REGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLG----TALIDMYAKC 291
Query: 279 GHLIEAEEFVERMPFEPTVEVWEA 302
G++ +A E M E V W +
Sbjct: 292 GNMNKAMEVFWGMK-EKNVYTWSS 314
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 215/396 (54%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA++ + D F+ S+ +C N+ +E G++VH + + D
Sbjct: 325 QNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAP 384
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L + +++MY KC N AR +FD+ +N++ W M+ YA++GQG + LFE+M
Sbjct: 385 LASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEK 444
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T + V +AC+ V EG LYF+ M+ +YGIVP IEHY I+ + G +G L +A
Sbjct: 445 MTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA 504
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
+ F+E VW+ L + ++H E A E L L+ A
Sbjct: 505 KNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATN 564
Query: 332 ------IVDKIPLPPRK--KQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
++ + RK KQ + + KN V + + D + Y ++ L ++
Sbjct: 565 NKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERL 624
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E GY T V+HD+++E +E AL++HSE+LAIA+G+ISTP PLRI KNLR+C DCH
Sbjct: 625 KEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCH 684
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK +S GRE++VRD RFHHF+D CSC D+W
Sbjct: 685 EAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 27/263 (10%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIE 145
PLR ++ L+ + G +A+ ++ + A A ++ +S+ G L +
Sbjct: 205 PLRDTTSWNTIISGLM---RSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPD 261
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL----RKRNLSSWHLMI 201
+G+++H + +A D + + L++MY KC A VFD R N + W M+
Sbjct: 262 LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFA-WSTMV 320
Query: 202 SGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
+GY NG+ + L LF +M + G D+ T V AACA+ V++G + +G
Sbjct: 321 AGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQG-------RQVHGC 373
Query: 262 VPGIEHYI------AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
V + + + AI+ + G+L +A +R + VW ++ HG +
Sbjct: 374 VEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR-ACTKNIAVWTSMLCSYASHGQGRI 432
Query: 316 EDRAEELLGDLDPSKAIVDKIPL 338
A EL + K ++I L
Sbjct: 433 ---AIELFERMTAEKMTPNEITL 452
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A M + A+ V ++++ C + +E GKRVH + + DV L N +++MY
Sbjct: 98 AFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMY 157
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
KC AR+VF + +R+ SW++ I +G + LF++
Sbjct: 158 AKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDE 203
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACA 240
AR VFD+ R W L ISG A G+ ADG+ F +M G P+ V CA
Sbjct: 64 ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 241 SAEAVKEG 248
V+ G
Sbjct: 124 GMGDVESG 131
>gi|302771608|ref|XP_002969222.1| hypothetical protein SELMODRAFT_91949 [Selaginella moellendorffii]
gi|300162698|gb|EFJ29310.1| hypothetical protein SELMODRAFT_91949 [Selaginella moellendorffii]
Length = 445
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 204/371 (54%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
F+++LD+C + ++ G +H + S F ++ L+ MYGKC R AR +FD +
Sbjct: 75 FAAVLDACASHSTLSDGAAIHASILESGFAISTVVSTGLVNMYGKCGRLREARAIFDAIA 134
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+R+L W MI+ YA G+G + F+ M G D+ F+ V AC+ A ++ G
Sbjct: 135 FRERDLVLWTSMIAAYAQWGRGEAAIEAFQSMLLDGIAADEVVFISVLCACSHAGLLELG 194
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF ++ DY + G+ HY I +LG AG L EAE +ERMPF+P W AL +
Sbjct: 195 CQYFASIEPDYRVAIGVHHYACAIDLLGKAGWLDEAESLIERMPFDPDGACWTALLAACK 254
Query: 309 IHGDVELEDRAEELLGDLDPSKA-------------------IVDKIPLPPRKKQSATNM 349
+H D + +RA E LDP A ++ RK +
Sbjct: 255 LHKDGDRAERASERAMALDPDSAAPYALLVKIQGGGEASEQTTRRRLERGVRKLVPGCSS 314
Query: 350 LEEKNRVSDYRS--TDLYRGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ ++RV ++ + D R YE+++ L + EAGYVPDT V+ +DE KE+ +
Sbjct: 315 IVVRDRVHEFTAGAMDHPRAAEIYEELERLRAPLAEAGYVPDTGVVIQAVDEREKERIVL 374
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+GL++TP PLR++ NLR+C DCH+A+K ++ I RE++VRD RFH F
Sbjct: 375 AHSEKLAVAFGLLATPANSPLRVVNNLRMCSDCHSAMKFIASITRREIVVRDLIRFHRFD 434
Query: 466 D-GKCSCGDYW 475
+ G+CSCGDYW
Sbjct: 435 EQGRCSCGDYW 445
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI Y AR + + + + SW +I+ YAA G + ++LF M G
Sbjct: 10 NSLIMAYAHSGFVGEARNLLFAMPQWDPVSWTTVIAAYAAVGDSKEAVILFRMMDLEGIP 69
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
D F V ACAS + +G ++ I+++ + I + ++ + G G L EA
Sbjct: 70 ADGVAFAAVLDACASHSTLSDGAAIHASILESGFAISTVVS--TGLVNMYGKCGRLREAR 127
Query: 286 EFVERMPF-EPTVEVWEAL 303
+ + F E + +W ++
Sbjct: 128 AIFDAIAFRERDLVLWTSM 146
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 209/386 (54%), Gaps = 26/386 (6%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E G+D+ + LL +C +L +++ G++V + ++++ N LI MY +
Sbjct: 212 EMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLR 271
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C A +VF ++++ +W MISG AANG G D + +FE+M ++ PD++TF V
Sbjct: 272 CGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGV 331
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFE 294
+AC+ + V EGF +F++M+ +YG+ P + HY I+ ++G AG L EA EFV M
Sbjct: 332 LSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVA 391
Query: 295 PTVEVWEALRNFAQIHGDVELEDRA--------EELLGD----LDPSKAIVDKIPLPPRK 342
P +W L +IHG V+L +R + GD L+ A+ + + +
Sbjct: 392 PDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIR 451
Query: 343 K---------QSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTR 389
K +E V ++ + D YE + + Q+R AGYVP+
Sbjct: 452 KLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVS 511
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
LHD+D E KE AL YHSE+LAIA+ L+ TP P+R+ KNLR+C DCHN K+ S I
Sbjct: 512 SELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIY 571
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
R +IVRD RFHHF+ GKCSC DYW
Sbjct: 572 RRIVIVRDRTRFHHFQGGKCSCNDYW 597
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
S+ +++H + ++D L L+ Y + ARK+FD++ R+ +W+++I+
Sbjct: 136 SLAHARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLIT 195
Query: 203 GYAANGQGADGLMLFEQMR--KTGPHPDKETFLVVFAACASAEAVKEG 248
YA N + D L LFE+MR + PD T +++ AC+S A+ G
Sbjct: 196 CYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFG 243
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 207/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CG++ ++ MGK +HE + + D++L L++MY KC + + +VF+ + R
Sbjct: 273 SVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR 332
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W MI G A +G G L F +M P+ TF+ V +AC+ V EG+ YF
Sbjct: 333 DVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYF 392
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M Y + P IEHY ++ +LG AG L EA E ++ MPF P VW AL +I+ +
Sbjct: 393 TSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKN 452
Query: 313 VELEDRAEELLGDLDP-------------SKAI-VDKIPLPPR-------KKQSATNMLE 351
VE+ + A L +L+P S+A DK+ R +K ++ +E
Sbjct: 453 VEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIE 512
Query: 352 EKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N V ++ + D E +K + + +++ GY P T VL D DE+ KE AL +H
Sbjct: 513 VDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHH 572
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL+ST P +RI+KNLR+C DCH AIK++S+ R +IVRD RFHHF +G
Sbjct: 573 SEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNG 632
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 633 SCSCKDYW 640
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N +I + + A+K+FD+ +R+L SW MI+ YA Q + L LF +M
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
+ PDK T + V +AC A+ G + E ++ +
Sbjct: 260 QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN 297
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 200/370 (54%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ L +S L ++ +G ++H S +V + N LI MY K + A+ VF +
Sbjct: 21 MAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMT 80
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ +W+ +I+G++ +G G + L +F+ M TG P+ TF+ V ACA + V EGF
Sbjct: 81 CCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFY 140
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF + + IVPG+EHY I+ +L +G L EAE F+ V W L N +H
Sbjct: 141 YFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVH 200
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
+ + E L L+P + ++ + R KK+ +
Sbjct: 201 KHYDKGKKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSW 260
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
LE +N + S D+ E YE +K L ++R GYVPD VLHDI++E K L
Sbjct: 261 LEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLS 320
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYGL+ TP P+R+IKNLR+C DCH AIK++SK+ R ++VRD RFHHF+
Sbjct: 321 YHSEKLAVAYGLMKTPSGAPIRVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQ 380
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 381 NGYCSCGDYW 390
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 214/372 (57%), Gaps = 30/372 (8%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C L +++G+ +H + S ++ + + L++MYGKC A +VF ++ +
Sbjct: 327 SSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQ 386
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQM---RKTGPHPDKETFLVVFAACASAEAVKEG 248
RNL +W+ MI GYA G + L +F++M ++T P + T + V AC+ KEG
Sbjct: 387 RNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAP--NYITLVNVLTACSRGGLTKEG 444
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ F+ MK +GI P IEHY ++ +L AG A + ++ MP P++ VW AL +
Sbjct: 445 YELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCK 504
Query: 309 IHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLEE------------ 352
+HG EL A E L +LDP + ++ + + AT++ +E
Sbjct: 505 MHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGR 564
Query: 353 -----KNRVSDYRST----DLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
KN V +++ D+ R + L GQM+ AGY+PDT+Y L+D++EE KE
Sbjct: 565 SWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESE 624
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LA+A+GLI PP +P+RI+KNLRIC DCH A K +S I GRE+IVRDN FHH
Sbjct: 625 VFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHH 684
Query: 464 FRDGKCSCGDYW 475
F++ +CSC DYW
Sbjct: 685 FKNYECSCKDYW 696
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 108 EGKVREAIE-YMG-QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
+G+ E +E Y G + A + ++C + ++ +G++ + + F KDV +
Sbjct: 200 DGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSV 259
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N +++ YGKC AR VFD + RN SW M+ YA NG + ++ R+ G
Sbjct: 260 SNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGE 319
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P V CA + G + I I A++ + G G + +AE
Sbjct: 320 EPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSC-IDSNIFVASALVDMYGKCGGIEDAE 378
Query: 286 EFVERMPFEPTVEVWEAL 303
+ MP + + W A+
Sbjct: 379 QVFFEMP-QRNLVTWNAM 395
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 147 GKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G ++H L LR D ++ ++MY K LAR++FD++ RN+ +W+ +++
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+G+ + + + +R G P+ + F ACA + G
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLG 241
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 209/386 (54%), Gaps = 26/386 (6%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E G+D+ + LL +C +L +++ G++V + ++++ N LI MY +
Sbjct: 226 EMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLR 285
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C A +VF ++++ +W MISG AANG G D + +FE+M ++ PD++TF V
Sbjct: 286 CGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGV 345
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFE 294
+AC+ + V EGF +F++M+ +YG+ P + HY I+ ++G AG L EA EFV M
Sbjct: 346 LSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVA 405
Query: 295 PTVEVWEALRNFAQIHGDVELEDRA--------EELLGD----LDPSKAIVDKIPLPPRK 342
P +W L +IHG V+L +R + GD L+ A+ + + +
Sbjct: 406 PDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIR 465
Query: 343 K---------QSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTR 389
K +E V ++ + D YE + + Q+R AGYVP+
Sbjct: 466 KLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVS 525
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
LHD+D E KE AL YHSE+LAIA+ L+ TP P+R+ KNLR+C DCHN K+ S I
Sbjct: 526 SELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIY 585
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
R +IVRD RFHHF+ GKCSC DYW
Sbjct: 586 RRIVIVRDRTRFHHFQGGKCSCNDYW 611
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
S+ +++H + ++D L L+ Y + ARK+FD++ R+ +W+++I+
Sbjct: 150 SLAHARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLIT 209
Query: 203 GYAANGQGADGLMLFEQMR--KTGPHPDKETFLVVFAACASAEAVKEG 248
YA N + D L LFE+MR + PD T +++ AC+S A+ G
Sbjct: 210 CYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFG 257
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 202/372 (54%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+ +L +C + E GK +H + + F+ +NN LI+ Y KC N +AR VF +
Sbjct: 269 LTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMP 328
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ SW +I+G A +G G + + LF +M ++G PD TF+ + AC+ + V+EG
Sbjct: 329 VARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGC 388
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F MKN YGI P IEHY ++ + G A L +A EF+ MP P +W L I
Sbjct: 389 GLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSI 448
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
HG++E+ + + L ++DP +I + KK +
Sbjct: 449 HGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWS 508
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKA 403
M+E + + + ++ +EK++ + ++R EAGY P R VLHDI+EE KE +
Sbjct: 509 MIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDS 568
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LA A+G+ P LRI+KNLR+CGDCH +K++SK+ E+IVRD RFH
Sbjct: 569 VSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHS 628
Query: 464 FRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 629 FKDGFCSCRDYW 640
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+++ N ++ Y K LAR+VF ++ R+ SW MI G+A NG + F +
Sbjct: 197 VRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRE 256
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+ + ++ + V +ACA A A + G L+ + K + V + + A+I
Sbjct: 257 LLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNN--ALIDTYSKC 314
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
G++ A + MP ++ W ++ +HG E A +L +++ S D I
Sbjct: 315 GNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGE---EAIQLFHEMEESGVRPDGITF 371
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 36/160 (22%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L + N + + G ++H F + + LI MY +C ++ AR+VFD++
Sbjct: 106 FAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMS 165
Query: 191 K-------------------------------RNLSSWHLMISGYAANGQGADGLMLFEQ 219
+ RNL+SW+ M++GYA G+ +F +
Sbjct: 166 EPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYE 225
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYF-EIMKND 258
M P D+ ++ + A E F +F E+++ +
Sbjct: 226 M----PLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREE 261
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 205/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+LL +C +L +++ G H F D + N +I+MY KC ++R++FD+++ R
Sbjct: 418 ALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR 477
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ MI GY +G + L LF++++ G PD T + V +AC+ + V EG +F
Sbjct: 478 DIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWF 537
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M ++ I P + HYI ++ +L AG+L EA F++RMPF P V +W AL + H +
Sbjct: 538 SSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKN 597
Query: 313 VELEDRAE---ELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRST------- 362
+E+ ++ +LLG ++ + + R Y+ +
Sbjct: 598 IEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVE 657
Query: 363 -----DLYRGEYE----------KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
++ G ++ K++ L QM++ GY D+ +VLHD++EE KE+ L YH
Sbjct: 658 ISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYH 717
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE++AIA+G+++T P + + KNLRIC DCH+AIK ++ + RE+ VRD RFHHF+DG
Sbjct: 718 SEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDG 777
Query: 468 KCSCGDYW 475
C+C D+W
Sbjct: 778 ICNCQDFW 785
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 10/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +C L ++ GK++H + S D + N LI MY KC A D++
Sbjct: 315 LATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMI 374
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ S+ +ISG NG L++F QM+ +G P ET + + AC+ A++ G
Sbjct: 375 AKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG-- 432
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ Y +V G + AII + G + + E +RM + W +
Sbjct: 433 ---TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIIS-WNTMIIG 488
Query: 307 AQIHG 311
IHG
Sbjct: 489 YGIHG 493
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A + S+L + G ++ GK +H + F +V L L++MY KC
Sbjct: 202 QQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLL 261
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAA 238
ARK+F+ + K+N W MI GY + +D L L++ M G +P T + A
Sbjct: 262 FYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRA 321
Query: 239 CASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
CA +K G L+ ++K+ + + + ++I + G + A F++ M + TV
Sbjct: 322 CAQLTDLKRGKKLHCHMIKSGMDLDTTVGN--SLISMYAKCGIMDNAVGFLDEMIAKDTV 379
Query: 298 E 298
Sbjct: 380 S 380
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
F LL +C +L+++++G+ +H D+ ++ L+ MY KC + A+ +F+ +
Sbjct: 110 FPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSIS 169
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R++ +W+ MI+ ++ + A + QM++ G P+ T + + A A+ +G
Sbjct: 170 HQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQG 229
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+LAR VFDQ+ K ++ W++MI YA +G + L+ M + G P TF + AC
Sbjct: 58 QLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKAC 117
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEP-T 296
+S +A++ G L I + + + ++ Y+ A++ + GHL +A+ + +
Sbjct: 118 SSLQALQLGRL---IHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174
Query: 297 VEVWEAL 303
+ W A+
Sbjct: 175 IVAWNAM 181
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 215/374 (57%), Gaps = 32/374 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS L +C +L S+++G +VH L + K V ++N LI+MY KC + + A+ VF+++
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++SW+ +ISGY+ +G G L + + M+ P+ TFL V + C++A + +G
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
FE M D+GI P +EHY ++++LG +G L +A + +E +P+EP+V +W A+ + +
Sbjct: 572 CFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQ 631
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
+ E R+ E + ++P + +V + + KK+ +
Sbjct: 632 NNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSW 691
Query: 350 LEEKNRV-------SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+E + V SD+ L G E LN + AGYVPD VL D+D+E K+K
Sbjct: 692 IEHQGDVHYFSVGLSDHPDMKLINGMLE---WLNMKATRAGYVPDRNAVLLDMDDEEKDK 748
Query: 403 ALQYHSERLAIAYGLISTP-PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L HSERLA+AYGL+ P R + I+KNLRIC DCH+A+K++S IV R+L++RD RF
Sbjct: 749 RLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRF 808
Query: 462 HHFRDGKCSCGDYW 475
HHF G CSCGD+W
Sbjct: 809 HHFHAGVCSCGDHW 822
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 105 LCKEGKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C+ G EA++ ++A SS+L+ C K +G+++H L+ F D
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ ++N LI++Y KC A K+F +L +N SW+ +I GY G+G +F + +
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
+ TF ACAS ++ G
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLG 468
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L + L + + K VH + + +V D + L+++Y + + A KVF+++
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
K ++ W MI+ + NG + + LF +MR+ P++ T + CA
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 3/180 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+S L +L E+ +H + + + + LI Y C + AR VF+ +
Sbjct: 148 VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI 207
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+++ W ++S Y NG D L L MR G P+ TF A A
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAK 267
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ +I+K Y + P + + ++++ G + +A + MP V + F Q
Sbjct: 268 GVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 210/371 (56%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +C +L S++MGK + E + ++ F D ++ LI M+ KC + A VF+++
Sbjct: 88 LATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFERIS 147
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF 249
++L++W MI+GYA +G + L LF +M + PD F + AC+ V++G
Sbjct: 148 DKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVEDGL 207
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+ M+ D+GIVP +EHY+ ++ +LG AG A + + MP + +VW +
Sbjct: 208 KFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSACTK 267
Query: 310 HGDVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPRK--KQSATN 348
H ++EL + A L ++P +A V + + R K +
Sbjct: 268 HCNLELGELAARKLLYMNPGSHANYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAPGWS 327
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E V + + D + Y+K++ +N ++ EAGYVP+T V+HD++ E KE+AL
Sbjct: 328 QVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLEREEKEEAL 387
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+ HSERLAIA+GLIST LRI+KN R C DCH+A+K +SKI GR LIVRD RFHHF
Sbjct: 388 KVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRDGSRFHHF 447
Query: 465 RDGKCSCGDYW 475
GKC+C D+W
Sbjct: 448 ESGKCTCKDFW 458
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L+N L+ MY KC + ARKVFD + + W +I GY G A+ L+LF+++ KT
Sbjct: 21 LDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGYPAEALLLFKKLLKTA 80
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ T + +ACA ++ G E + ++ G + ++I + G + +A
Sbjct: 81 IKPNGATLATILSACADLGSLDMGKEIEEYILSN-GFQSDRQVQTSLIHMFSKCGSIGKA 139
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLG 324
ER+ + + W ++ N IHG AEE LG
Sbjct: 140 ISVFERIS-DKDLAAWSSMINGYAIHG------MAEEALG 172
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 201/371 (54%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L + ++ +++ G ++H L + DV + LI+MYGKC A +F ++
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ W+ +IS +G G L LF+ MR G D TF+ + +AC+ + V E
Sbjct: 515 QETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQW 574
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ M+ +Y I P ++HY ++ + G AG+L +A V MP + +W L +IH
Sbjct: 575 CFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIH 634
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLEEKNRVSDYRST---- 362
G+ EL A + L ++D ++ I K + A + R R T
Sbjct: 635 GNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVK-VRSLARDRGLRKTPGWS 693
Query: 363 ---------DLYRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
Y G YE+++ LN +M+ GYVPD +VL D++E+ KE+ L
Sbjct: 694 SVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEIL 753
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAI +G+ISTPP+ P+RI KNLR+CGDCHNA K +SKI RE+IVRD+ RFHHF
Sbjct: 754 TSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHF 813
Query: 465 RDGKCSCGDYW 475
+DG CSCGDYW
Sbjct: 814 KDGICSCGDYW 824
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SL G L +G+ VH ++R D+ + N L+ MY K + AR VF+QL
Sbjct: 354 SLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS 413
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF- 249
R++ SW+ +I+GYA NG ++ + + M + P++ T++ + A + A+++G
Sbjct: 414 RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473
Query: 250 LYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ ++KN ++ ++A +I + G G L +A +P E +V W A+ +
Sbjct: 474 IHGRLIKN----CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSL 528
Query: 308 QIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
IHG E +A +L D+ D I
Sbjct: 529 GIHGHGE---KALQLFKDMRADGVKADHITF 556
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 79 TGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLD 136
H + P+R + S + + C+ G V EA+ + + + D SS+L
Sbjct: 200 VAHKVFVDMPVR---DVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLP 256
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
C + G VH + DV ++N LI MY K + A++VFD + R+L S
Sbjct: 257 ICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVS 316
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
W+ +I+ Y N L F++M G PD T +
Sbjct: 317 WNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVV 353
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 107 KEGKVREAIEYMGQDASASA---GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G+ R++++ + + S S + F +L +C +L G+++H + F DV
Sbjct: 126 RRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDV 182
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ LI +Y + +A KVF + R++ SW+ MISG+ NG A+ L + ++M+
Sbjct: 183 YVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTE 242
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAG 279
D T + CA + V G ++ + Y I G+E + A+I + G
Sbjct: 243 EVKMDTVTVSSMLPICAQSNDVVGG-----VLVHLYVIKHGLESDVFVSNALINMYSKFG 297
Query: 280 HLIEAEEFVERMPFEPTVEVWEAL 303
L +A+ + M V W ++
Sbjct: 298 RLQDAQRVFDGMEVRDLVS-WNSI 320
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ + SC N I + K++H LL +DV L +L+ +Y + L+ F ++
Sbjct: 54 FNLVFRSCTN---INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACAS 241
++N+ SW+ M+S Y G+ D + + E + +G PD TF V AC S
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS 162
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 209/371 (56%), Gaps = 30/371 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-K 191
S L +C NL +++ GK +H +R + L LI+MY KC A VF + + K
Sbjct: 415 SALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVK 474
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R + W+ MI G+A +G+ + + +FE+M+ P+K TF+ + AC+ VKEG Y
Sbjct: 475 RKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSY 534
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
FE+M +DYGI P IEHY ++ +L +GHL ++EE + MP P V +W AL N +I+
Sbjct: 535 FELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYK 594
Query: 312 DVELEDRAEELLGDLDPS----KAIVDKIPLPPRKKQSATNMLEEKN-------RVSDYR 360
D+E R ++ ++DP+ ++ I + + M+ EKN ++ +
Sbjct: 595 DMERGYRIGRIIKEIDPNHIGCNVLLGNI-YSTSGRWNEARMVREKNEINSDRKKIPGFS 653
Query: 361 STDL----------------YRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAKEKA 403
S +L R Y + + +++ AGYVP+ VL D D EE KE A
Sbjct: 654 SIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETA 713
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GL++T P P+RI+KNLR+CGDCH A K +SK+ R +IVRD R+HH
Sbjct: 714 LSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHH 773
Query: 464 FRDGKCSCGDY 474
F+DG CSC DY
Sbjct: 774 FKDGICSCKDY 784
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 8/212 (3%)
Query: 106 CKEGK-VREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C G VRE + +VF ++L+ G +E + V + SA +D
Sbjct: 288 CGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFD----SAVDRD 343
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
N +I Y N LA+++FD++ +R++ SW +I+GY G + L F +M +
Sbjct: 344 FYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQ 403
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
+ P++ T + AAC++ A+ +G ++ D I ++I + G +
Sbjct: 404 SEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCGEID 462
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A + V W A+ +HG E
Sbjct: 463 SASSVFHEHKVKRKVWPWNAMIGGFAMHGKPE 494
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SSL+D C KSI K+ H L T+A + + NK ++ T A K+FDQ+
Sbjct: 182 LSSLIDLC---KSINQIKQTHANLITTAQITLPVIANKFLKNVALASLT-YAHKLFDQIP 237
Query: 191 KRNLSSWHLMISGYAANGQG-ADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +L ++ MI ++ + D + +F + R +G P++ +F+ F AC + V+EG
Sbjct: 238 QPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREG 297
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S L C + +++ G+++H + + D+ + + L++MY KC A VFD L
Sbjct: 635 TLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL 694
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ SW+ +I GY+ +GQG L FE M G PD+ TF+ V +AC+ ++EG
Sbjct: 695 VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGK 754
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F + YGI P IEHY ++ +LG AG E E F+E M V +WE + ++
Sbjct: 755 KHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKM 814
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIP-----LPPR--KKQSATN 348
HG++E +RA L +L+P +K + D + + R KK+ +
Sbjct: 815 HGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCS 874
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + S D R + K++ L+ ++ GY P+T +VLH++ + K++ L
Sbjct: 875 WVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELL 934
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSERLA+A+ L+ST R +RI KNLRICGDCH+ +K +S+I +EL+VRD FHHF
Sbjct: 935 FYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHF 994
Query: 465 RDGKCSCGDYW 475
++G CSC ++W
Sbjct: 995 KNGSCSCQNFW 1005
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 110 KVREAIE----YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
K+ E +E + G D + +S +L +C + + GK +H + S D L
Sbjct: 106 KIPETVEKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHL 165
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N L+ +Y KC + A KVF ++ +R++ SW +I+G+ A G G+ + LF +MR+ G
Sbjct: 166 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV 225
Query: 226 HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
++ T+ AC+ ++ G ++ E +K G + A++ + G ++ A
Sbjct: 226 EANEFTYATALKACSMCLDLEFGKQVHAEAIK--VGDFSDLFVGSALVDLYAKCGEMVLA 283
Query: 285 EEFVERMPFEPTVEVWEALRN-FAQIHGDVE 314
E MP + V W AL N FAQ+ GD E
Sbjct: 284 ERVFLCMPKQNAVS-WNALLNGFAQM-GDAE 312
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L SC +L +++GK+VH + ++ + + L++MY K A +F++L
Sbjct: 534 TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
KR+L +W ++++GYA +GQG + F QM++ G P++ T + C+ + G
Sbjct: 594 IKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 652
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 87 DPLRGNAQLESLDVN-----LLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCG 139
D L+ ++E DV + L ++G+ REA E + + + F+ SL+ +
Sbjct: 383 DALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAAT 442
Query: 140 NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
+L + G+ +H + F D + N L+ MY K + + +VF+ R+L SW+
Sbjct: 443 DLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNA 502
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKN 257
++SG+ N GL +F QM G +P+ TF+ + +C+S V G ++ +I+KN
Sbjct: 503 LLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN 561
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+++ L +C +E GK+VH E ++ F D+ + + L+++Y KC LA +VF
Sbjct: 231 TYATALKACSMCLDLEFGKQVHAEAIKVGDF-SDLFVGSALVDLYAKCGEMVLAERVFLC 289
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ K+N SW+ +++G+A G L LF +M + + K T V CA++ ++ G
Sbjct: 290 MPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG 349
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S++L C N ++ G+ VH L D ++ L++MY KC A KVF ++
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRI 391
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ SW +I+ GQ + +F++MR +G P++ T + +A A G
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSA-----ATDLGD 446
Query: 250 LYF 252
LY+
Sbjct: 447 LYY 449
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 212/372 (56%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L +C ++++G+ V + + V L + L+ MY +C AR FD+L+
Sbjct: 213 FVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYARCGLVSKARDWFDRLQ 272
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN+ +W MI+GY +G G + + LF MR+ GP P+ TF+ V AACA A V EG
Sbjct: 273 ERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPNDVTFVAVLAACAHAGLVNEGRN 332
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQI 309
F+ MK YG+VP EHY +++ + G AG L +A +F+ + +P EP EVW A+ ++
Sbjct: 333 AFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFICDSIPEEPGPEVWTAMLGACKM 392
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR-KKQSATN 348
H + L E L L+P V + + R KKQ +
Sbjct: 393 HKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNVMIKRRLKKQIGYS 452
Query: 349 MLEEKNRVSDYR----STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++E +R S R Y ++ L ++ +AGYVP+T VLH+++EE +E AL
Sbjct: 453 LIELGGTSHLFRMGEKSHQQTREIYRYLEELIHRISDAGYVPETDSVLHELEEEEREVAL 512
Query: 405 QYHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+YHSE+LA+AYGL+ S+ P+R+IKNLRICGDCH AIK MS + RE+IVRD RFHH
Sbjct: 513 RYHSEKLAVAYGLMMSSGSTAPIRVIKNLRICGDCHLAIKFMSSVESREIIVRDKHRFHH 572
Query: 464 FRDGKCSCGDYW 475
F+DGKCSC +YW
Sbjct: 573 FKDGKCSCLEYW 584
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCG--NLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EAI + G+ +A+ + F+ + +L ++ G VH F D + L+
Sbjct: 92 EAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLLGFGSDRFVQTALV 151
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+Y KC +ARK+FD +R R++ +W+ MISGY NG + ++ +M+ PD
Sbjct: 152 VLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYREMQVAQVVPDSA 211
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFV 288
TF+ +ACA A A+ G E+ + + ++ A++ + G + +A ++
Sbjct: 212 TFVATLSACAQAGALDLG---REVERRIVSDQMDVSVFLGSALVNMYARCGLVSKARDWF 268
Query: 289 ERMPFEPTVEVWEALRNFAQIHG 311
+R+ E V W ++ +HG
Sbjct: 269 DRLQ-ERNVVTWTSMIAGYGMHG 290
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 207/370 (55%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L C + +++ G+++H + + D+ + + L++MY KC A VFD L
Sbjct: 395 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 454
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ SW+ +I GY+ +GQG L FE M G PD+ TF+ V +AC+ ++EG
Sbjct: 455 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 514
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F + YGI P IEHY ++ +LG AG E E F+E M V +WE + ++H
Sbjct: 515 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMH 574
Query: 311 GDVELEDRAEELLGDLDP--------------SKAIVDKIP-----LPPR--KKQSATNM 349
G++E +RA L +L+P +K + D + + R KK+ +
Sbjct: 575 GNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSW 634
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +V + S D R + K++ L+ ++ GY P+T +VLH++ + K++ L
Sbjct: 635 VEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLF 694
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLA+A+ L+ST R +RI KNLRICGDCH+ +K +S+I +EL+VRD FHHF+
Sbjct: 695 YHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFK 754
Query: 466 DGKCSCGDYW 475
+G CSC ++W
Sbjct: 755 NGSCSCQNFW 764
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L +C + + GK +H + S D L N L+ +Y KC + A KVF ++
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ SW +I+G+ A G G+ GL +F QM G +P+ TF+ + +C+S V G
Sbjct: 254 ERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312
Query: 250 LYFEIMKN 257
++ +I+KN
Sbjct: 313 VHAQIVKN 320
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L SC +L +++GK+VH + ++ + + L++MY K A +F++L
Sbjct: 294 FISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI 353
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
KR+L +W ++++GYA +GQG + F QM++ G P++ T + C+ + G
Sbjct: 354 KRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+F+SL+ + +L G+ +H + F D+ ++N + MY K + + F +
Sbjct: 92 IFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAM 151
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
NL+S + ++SG+ G + Q+ G P+ TF+ + CAS + EG
Sbjct: 152 MIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGK 211
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +++K+ GI P + +++ V G A + +P E V W AL
Sbjct: 212 AIHGQVIKS--GINPDSHLWNSLVNVYAKCGSANYACKVFGEIP-ERDVVSWTAL 263
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 214/401 (53%), Gaps = 36/401 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G REA+ + + D V +L +C ++E GK VH L+ ++
Sbjct: 186 QAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLF 245
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L++MY KC +LA VF++++ +N+ +W MI G A +G+G++ +MLF QM +G
Sbjct: 246 FGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSG 305
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD F+ V AC A V +G F+ M YGI P IEHY ++ +L G L EA
Sbjct: 306 IRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEA 365
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPP 340
+E +++MP EP +W AL + H +VE + + L+P K+ ++ I
Sbjct: 366 KEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAAS 425
Query: 341 RKKQSA---TNMLEEK----------------------NRVSDYRSTDLYRGEYEKMKGL 375
+ SA +++ EK +S R D+ YE +
Sbjct: 426 GRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYE----I 481
Query: 376 NGQMR-EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
+ ++R E GY+PD + VL DI+EE KE AL HSE+LAIA+ LIS MP+RI KNLR+
Sbjct: 482 DTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNLRV 541
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
C DCH+ K++SK+ GRE++VRD RFH F++G CSC DYW
Sbjct: 542 CHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
LLRT+A V D N LI Y + AR +FD++ RN SW M++GY G G +
Sbjct: 134 LLRTAAAV-DASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGRE 192
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAII 272
L +F +M+ PD + V AACA A+++G +K +GI + A++
Sbjct: 193 ALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKA-HGIKINLFFGTALV 251
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ G + A + ERM ++ V W + +HG
Sbjct: 252 DMYSKCGEVQLAMDVFERMQYK-NVLAWTTMIKGLAMHG 289
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 204/365 (55%), Gaps = 27/365 (7%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLS 195
C ++ G+ VH + S D +L +++MY KC A +VF+ L + L+
Sbjct: 241 CTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLT 300
Query: 196 SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIM 255
+W+ MI G+A +G+G D L LF +M + G PD T + V ACA A + EG YF +
Sbjct: 301 TWNCMIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYV 360
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
YGI P +EHY ++ + G AG L EA++ ++ MP EP V V AL ++IHGDV+L
Sbjct: 361 PQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDL 420
Query: 316 EDRAEELLGDLDPSKA-----IVDKIPLPPR----------------KKQSATNMLEEKN 354
+ + +LDP + + + + R K++ +++E +
Sbjct: 421 GEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQG 480
Query: 355 RVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSER 410
V +++ L R E Y + + ++R GYVPDTR VLH I EE KE L YHSE+
Sbjct: 481 EVCEFQCGGLCHPRAEEVYAMARDMMREIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEK 540
Query: 411 LAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCS 470
LAIA+GL+ T P +RI KNLR+C DCH A K +S++ R+++VRD RFHHF+DG+CS
Sbjct: 541 LAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCS 600
Query: 471 CGDYW 475
C DYW
Sbjct: 601 CKDYW 605
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FD + +RNL SW+ M+SGY + D L +F++MR G + AC
Sbjct: 184 ARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTG 243
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT-VEVW 300
A A+ G ++ GI + A++ + G + EA E +P + W
Sbjct: 244 AGALARGREVHRWVEQS-GIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTW 302
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+ +HG E A +L G ++ D + L
Sbjct: 303 NCMIGGFAVHGRGE---DALKLFGRMEREGVAPDDVTL 337
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 207/373 (55%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S+L +C +L +++ GK +H + + + ++ LI+MY KC AR+VFD L
Sbjct: 292 VLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGL 351
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR+L +W MISG + +G GA+ L F +M G PD T L V C+ + V+EG
Sbjct: 352 HKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGL 411
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M +GIVP +EHY +I +LG AG L A E ++ MP EP V W AL + +I
Sbjct: 412 SIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRI 471
Query: 310 HGDVELEDRAEELLGDLDPSK-----AIVDKIPLPPRKKQSATNM--------------- 349
HGDV+L +R + +L P ++ + + +S T +
Sbjct: 472 HGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGC 531
Query: 350 --LEEKNRVSDYRSTD-LYRGEYEKMKGLNGQMR----EAGYVPDTRYVLHDIDEEAKEK 402
+E V ++ + D L+ E K LN +R E GYVP T+ VL D++EE KE+
Sbjct: 532 SWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQ 591
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
A+ +HSE+LA+A+GL+ST +RI KNLR C DCH+A+K +S + RE++VRD RFH
Sbjct: 592 AVSWHSEKLAVAFGLLST-QEGTIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFH 650
Query: 463 HFRDGKCSCGDYW 475
FR G CSC DYW
Sbjct: 651 TFRYGNCSCTDYW 663
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 119 GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN 178
G + + + F LL +L I K++H + T ++ L LI Y C N
Sbjct: 46 GTSSFSLPSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRN 102
Query: 179 TRLARKVFDQLRKRNLS-SWHLMISGYAANGQGADGLMLFEQMRKTG--PHPDKETFLVV 235
AR VFDQ + W+LMI Y+ + L LF QM G DK TF V
Sbjct: 103 LSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFV 162
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIV--PGIEHYI----AIIKVLGSAGHLIEAEEFVE 289
F AC+ ++ G+ +N +G+V G E I +++ + +++A+ +
Sbjct: 163 FTACSRHPTLR-GY-----GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFD 216
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK 330
MP + V W ++ + G++ RA EL D+ P +
Sbjct: 217 EMP-QRDVITWTSVVKGYAMRGELV---RARELF-DMMPGR 252
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIE-MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
SA F+ + +C ++ G+ VH ++ + D+ + N L+ MY A
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDA 211
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
++VFD++ +R++ +W ++ GYA G+ LF+ M P + ++ V+ A
Sbjct: 212 KRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMM----PGRNDVSWAVMVAGYVGH 267
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
E F M + P + ++ +L + HL
Sbjct: 268 RFYNEALQCFNDMLCHDEVKP---NEAVLVSILSACAHL 303
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 211/394 (53%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G ++A++ Q S + D ++ +L +C L ++++G L+ + F+ + L
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC + A ++F ++K++ W+ M+ G + NG LF + K G
Sbjct: 355 TALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR 414
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD+ TF+ + C V EG +F MK + + P IEHY ++ +LG AG L EA +
Sbjct: 415 PDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ 474
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------------------ 328
+ MP +P VW AL ++H D L ++ + L +L+P
Sbjct: 475 LINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHR 534
Query: 329 ---SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMRE 381
++ I + +K A + +E V ++ D L Y K+ L +++
Sbjct: 535 WEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKA 594
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
G+VP T +VL DI+EE KE L YHSE+LA+A+GLI++PP +R++KNLR+CGDCH+A
Sbjct: 595 VGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDA 654
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++SKI RE+I+RD RFH F DG CSC DYW
Sbjct: 655 IKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G REAI + D FS +L +C L G+ + + S ++V +
Sbjct: 194 GHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC N A +F + ++++ SW MI GYA NG L LF QM+
Sbjct: 254 TSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLK 313
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIM-KNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD T + V +ACA+ A+ G +M +N++ P + A+I + G + +A
Sbjct: 314 PDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAW 371
Query: 286 EFVERMPFEPTVEVWEAL 303
E M + V VW A+
Sbjct: 372 EIFTAMKKKDRV-VWNAM 388
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C + +G ++H LL + + DV + L+ +Y KC N A KVFD + +N
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW +I+GY ++G + + F+++ + G PD + + V AACA G + +
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWID 238
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+D G+ + +++ + G+L A MP E + W +
Sbjct: 239 RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTM 287
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 176 CC-----NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
CC +T ++ VF Q+++ N+ W+ MI G + D + L+ MR G P+
Sbjct: 56 CCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNF 115
Query: 231 TFLVVFAACASAEAVKEGF 249
T V ACA V+ G
Sbjct: 116 TIPFVLKACARKLDVRLGL 134
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 201/387 (51%), Gaps = 27/387 (6%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E + +D+ + S+L +C L ++E G+++HEL + + L MY K
Sbjct: 293 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 352
Query: 176 CCNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
C + AR FD+L + +NL +W+ MI+ YA+ G G + F +M + G PD TF
Sbjct: 353 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 412
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
+ + C+ + V G YF M Y I P +EHY + +LG AG L EA + V MP
Sbjct: 413 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 472
Query: 294 EPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-----------------VDKI 336
+W +L + H ++E+ + A L L+P VDK+
Sbjct: 473 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 532
Query: 337 PLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT 388
+ KK + +E + + D + Y ++ L +M+ AGY PDT
Sbjct: 533 RAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDT 592
Query: 389 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKI 448
YVLHDI EE KE L HSE+LA+A+G+++TP LR+ KNLRICGDCH A+ +S+I
Sbjct: 593 SYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEI 652
Query: 449 VGRELIVRDNKRFHHFRDGKCSCGDYW 475
GRE+IVRD RFHHF+ G CSCGDYW
Sbjct: 653 YGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 112 REAIEYMGQDASASAG-YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
R Y + G Y F +L S L S+ MGK VH L+ D+ + LI
Sbjct: 154 RTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLI 213
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+YGKC A KVFD + R++SSW+ +++GY +G L +FE+M P +
Sbjct: 214 ILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERM----PWRNIV 269
Query: 231 TFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE---- 285
++ + + + + ++ L+ E++K D G+ P +++ I+ VL + L E
Sbjct: 270 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRP---NWVTIMSVLPACAQLSTLERGRQ 326
Query: 286 --EFVERMPFEPTVEVWEAL 303
E RM V AL
Sbjct: 327 IHELACRMGLNSNASVLIAL 346
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 219/399 (54%), Gaps = 30/399 (7%)
Query: 107 KEGKVREAIEYMGQ----DASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVK 161
+ G +A+E + + D S L +C +L ++ +GK++H LR
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+ ++N LI+MY KC + AR VFD + +N +W +++GY +G G + L +F++MR
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ G D T LVV AC+ + + +G YF MK +G+ PG EHY ++ +LG AG L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIP 337
A +E MP EP VW A + +IHG VEL + A E + +L D S ++ +
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 338 LPPRKKQSAT---NMLEEK--------NRVSDYR-STDLYRGE---------YEKMKGLN 376
+ + T +++ K + V + +T + G+ Y+ +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
++++ GYVP+T + LHD+D+E K+ L HSE+LA+AYG+++TP +RI KNLR+CG
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH A MS+I+ ++I+RD+ RFHHF++G CSC YW
Sbjct: 812 DCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + +CG + S+ G+ H L + F+ +V + N L+ MY +C + ARKVFD++
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS 241
++ SW+ +I YA G+ L +F +M + G PD T + V CAS
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C +L + +GK++H TS ++++ + N L++MY KC A VF + +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ M++GY+ G+ D + LFE+M++ D T+ + A E
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
M + GI P I+++ S G L+ +E
Sbjct: 354 RQMLSS-GIKPNEVTLISVLSGCASVGALMHGKE 386
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 20/216 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHEL-------LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
S+L C ++ ++ GK +H LR + + + N+LI+MY KC AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 186 FDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACAS 241
FD L ++R++ +W +MI GY+ +G L L +M P+ T ACAS
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
A++ G ++ ++N VP +I + G + +A + M + V W
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSN-CLIDMYAKCGSISDARLVFDNMMAKNEV-TW 547
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
+L +HG EE LG D + I K+
Sbjct: 548 TSLMTGYGMHG------YGEEALGIFDEMRRIGFKL 577
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 214/372 (57%), Gaps = 28/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L +C ++ ++E G VH + +V + + L++MY KC A + F+ +
Sbjct: 663 LATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMP 722
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN+ SW+ MISGYA +G G L LF QM++ G PD TF+ V +AC+ V EGF
Sbjct: 723 VRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFE 782
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F+ M Y + P IEH+ ++ +LG AG + + EEF++ MP P +W +
Sbjct: 783 HFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRA 842
Query: 311 G--DVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSAT 347
+ EL RA ++L +L+P A+ V++ L R KK++
Sbjct: 843 NSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGC 902
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ + K+ V + + D E Y+K+K + +MR+ GYVP+T+Y L+D++ E KE+
Sbjct: 903 SWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEEL 962
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAIA+ +++ +P+RIIKNLR+CGDCH A K +S IV R++I+RD+ RFHH
Sbjct: 963 LSYHSEKLAIAF-VLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHH 1021
Query: 464 FRDGKCSCGDYW 475
F G CSC DYW
Sbjct: 1022 FDGGICSCQDYW 1033
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYA 205
G+++H L+ + D + N L+ YGKC +F ++ +R+ SW+ MISGY
Sbjct: 577 GRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI 636
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
NG + L M + G D T V +ACAS ++ G E+ + I +
Sbjct: 637 HNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERG---MEV--HACAIRACL 691
Query: 266 EHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
E + A++ + G + A F E MP + W ++ + HG
Sbjct: 692 EAEVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHG 740
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 136 DSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS 195
DSC ++E ++H + + DV N L+ ++ + N A+K+FD++ ++NL
Sbjct: 51 DSC----TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLV 106
Query: 196 SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
SW ++SGYA NG + MLF + G P+ AC
Sbjct: 107 SWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRAC 150
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 133 SLLDSCGNL--KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-CNTRLARKVFDQL 189
S L +C L +++G +H L+ S + D+ L+N L+ MY C + AR+VF+++
Sbjct: 145 SALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEI 204
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH----PDKETFL-VVFAACA 240
+ + +SW+ +IS Y G LF M++ P++ TF +V AC+
Sbjct: 205 KMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACS 260
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 125 SAGYDVFSSLLDSCGNLK-SIEMGKRVHELLRTSAFVKD-VELNNKLIEMYGKCCNTRLA 182
++ Y V S NLK G+ VH L +A V + + N L+ +Y KC A
Sbjct: 350 ASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNA 409
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
R +F + ++ SW+ +ISG N + + + F MR+ G P K + + ++CAS
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL 469
Query: 243 EAVKEG 248
+ G
Sbjct: 470 GWIMLG 475
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 85 TNDPLRGNAQLESLDVNLLSLCKEGKVREAI---EYMGQDASASAGYDVFSSLLDSCGNL 141
+ D + N+ + LD N + EA+ M ++ + + V S+L SC +L
Sbjct: 418 SKDTVSWNSIISGLDHN-------ERFEEAVACFHTMRRNGMVPSKFSVISTL-SSCASL 469
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
I +G+++H DV ++N L+ +Y + +KVF + + + SW+ I
Sbjct: 470 GWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFI 529
Query: 202 SGYAANGQGA-DGLMLFEQMRKTGPHPDKETFL 233
A + + F +M + G P++ TF+
Sbjct: 530 GALATSEASVLQAIKYFLEMMQAGWKPNRVTFI 562
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SL+D CG +M R+ + S+FVKD+ + + L+ + + A+ +F+Q+
Sbjct: 257 VACSLVD-CGLTLLEQMLARIEK----SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQM 311
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN + + ++ G A QG + +F++M+ + ++ V+ +A +KEG
Sbjct: 312 DDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEG 369
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 208/374 (55%), Gaps = 26/374 (6%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y S+L + +L +++ GK +H + F+ + ++N L++MY +C + A K+F
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFT 521
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ RNL W MIS Y +G G + LF +M+ PD TFL + AC+ + V E
Sbjct: 522 CTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNE 581
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G + EIMK +Y + P EHY ++ +LG L EA + V+ M EPT EVW AL
Sbjct: 582 GKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGAC 641
Query: 308 QIHGDVELEDRAEELLGDLD---PSKAI--------------VDKIPLPPR----KKQSA 346
+IH + E+ + A E L +LD P + V+++ + + K
Sbjct: 642 RIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPG 701
Query: 347 TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM-REAGYVPDTRYVLHDIDEEAKE 401
+ +E N++ + S D E Y+K+ + ++ RE GYV T++VLH++ EE K
Sbjct: 702 CSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKV 761
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+ L HSERLAIAYGL++T P+R+ KNLR+CGDCH+ ++S+ RELIVRD RF
Sbjct: 762 QMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRF 821
Query: 462 HHFRDGKCSCGDYW 475
HHF+DG CSCGD+W
Sbjct: 822 HHFKDGMCSCGDFW 835
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F LL +CG ++ + G +H L V + N L+ +Y KC + ARK+FD++
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 191 KRN-LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN + SW+ +IS Y+ NG + L LF +M K G + TF AC + +K G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 119 GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN 178
G D A+ + S+L +C L + K +H + D L N +I++YG+C
Sbjct: 357 GMDVDAT----MIGSILLACRGLNCLGKIKEIHGYTIRGG-LSDPVLQNTIIDVYGECGI 411
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
A ++F+ + +++ SW MIS Y NG L +F M++TG PD T + + +A
Sbjct: 412 IDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSA 471
Query: 239 CASAEAVKEG 248
S +K+G
Sbjct: 472 VCSLSTLKKG 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MYGKC + A +FD++ +R++ +W+ M+ GY +NG+ L ++ +MR G D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 232 FLVVFAACASAE 243
F V+ AC E
Sbjct: 61 FPVLLKACGIVE 72
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAF 159
L + G EA+E+ +A D S S++ + G L + GK +H + F
Sbjct: 233 LTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGF 292
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++ + N LI+MY KCC + FD + ++L SW +GYA N L L Q
Sbjct: 293 DSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQ 352
Query: 220 MRKTGPHPDKETFLVVFAAC 239
++ G D + AC
Sbjct: 353 LQMEGMDVDATMIGSILLAC 372
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++ L +C + I++G ++H + S V DV + N L+ MY + A +F L
Sbjct: 163 FAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLE 222
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA---------- 240
+++ +W+ M++G+ NG ++ L F ++ PD+ + + + A
Sbjct: 223 GKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKE 282
Query: 241 -SAEAVKEGF 249
A A+K GF
Sbjct: 283 IHAYAIKNGF 292
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 201/387 (51%), Gaps = 27/387 (6%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
E + +D+ + S+L +C L ++E G+++HEL + + L MY K
Sbjct: 256 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 315
Query: 176 CCNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
C + AR FD+L + +NL +W+ MI+ YA+ G G + F +M + G PD TF
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
+ + C+ + V G YF M Y I P +EHY + +LG AG L EA + V MP
Sbjct: 376 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 435
Query: 294 EPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-----------------VDKI 336
+W +L + H ++E+ + A L L+P VDK+
Sbjct: 436 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 495
Query: 337 PLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT 388
+ KK + +E + + D + Y ++ L +M+ AGY PDT
Sbjct: 496 RAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDT 555
Query: 389 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKI 448
YVLHDI EE KE L HSE+LA+A+G+++TP LR+ KNLRICGDCH A+ +S+I
Sbjct: 556 SYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEI 615
Query: 449 VGRELIVRDNKRFHHFRDGKCSCGDYW 475
GRE+IVRD RFHHF+ G CSCGDYW
Sbjct: 616 YGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y F +L S L S+ MGK VH L+ D+ + LI +YGKC A KVFD
Sbjct: 134 YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFD 193
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ R++SSW+ +++GY +G L +FE+M P + ++ + + + + ++
Sbjct: 194 NMTIRDVSSWNALLAGYTKSGCIDAALAIFERM----PWRNIVSWTTMISGYSQSGLAQQ 249
Query: 248 GF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE------EFVERMPFEPTVEVW 300
L+ E++K D G+ P +++ I+ VL + L E E RM V
Sbjct: 250 ALSLFDEMVKEDSGVRP---NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVL 306
Query: 301 EAL 303
AL
Sbjct: 307 IAL 309
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 210/370 (56%), Gaps = 27/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C +L +E GK++H ++ D + LI+ YGKC +T +AR VF+ L
Sbjct: 351 LSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLL 410
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++ S + MI YA NG G + L LF M+ TG P+ T+L V +AC +A ++EG
Sbjct: 411 EVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCH 470
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F +N I +HY ++ +LG AG L EAE + ++ V +W L + +IH
Sbjct: 471 IFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVV-IWRTLLSACRIH 529
Query: 311 GDVELEDRAEELLGDLDP-------------------SKAIVDKIPLPPR--KKQSATNM 349
GDVE+ R + DL P SK I K + KK A +
Sbjct: 530 GDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSW 589
Query: 350 LEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ + + + + D +R EK++ L +++E GYVPDTR+VL D+DEE K ++L
Sbjct: 590 VDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLY 649
Query: 406 YHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LA+A+ L S +RI+KNLR+CGDCH +K +SKIVGR++I RD KRFHHF
Sbjct: 650 YHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHF 709
Query: 465 RDGKCSCGDY 474
R+G CSCGDY
Sbjct: 710 RNGLCSCGDY 719
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AS S ++SSL+ C +KSI ++ F L NKLI+ Y KC +
Sbjct: 72 ASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVVY 129
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
ARKVFD++ R++ +W+ MI+ Y NG+ + + ++++M G PD+ TF VF A +
Sbjct: 130 ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSD 189
Query: 242 AEAVKEG 248
V EG
Sbjct: 190 LGLVHEG 196
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFV 160
S + G+ +EAI+ + D FSS+ + +L + G+R H + + V
Sbjct: 151 SYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV 210
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+V + + L++MY K R AR V DQ+ +++ + +I GY+ +G+ + L +F M
Sbjct: 211 SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM 270
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K G ++ T V C + E + G L
Sbjct: 271 TKKGIEANEYTLSSVLVCCGNLEDLTSGRL 300
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 207/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ LL +C +L ++ GK +H L + F++DV + LI+MY K + + A KVF +++
Sbjct: 1040 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 1099
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ L+SW+ MI G+A G G + + +F +M+K G PD TF + +AC ++ + EG+ Y
Sbjct: 1100 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 1159
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M DY IVP +EHY ++ +LG AG+L EA + + MP +P +W AL +IH
Sbjct: 1160 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHK 1219
Query: 312 DVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNML 350
++ + A + L L+P+ + + + + + + + +
Sbjct: 1220 NLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWI 1279
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ RV + S + + Y ++ L +M++ GYVPD V ++DE K+K L
Sbjct: 1280 QINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLS 1339
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
H+E+LAI YGLI P+R+IKN RIC DCH+A K +S + REL +RD RFHHFR+
Sbjct: 1340 HTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFRE 1399
Query: 467 GKCSCGDYW 475
GKCSC D+W
Sbjct: 1400 GKCSCNDFW 1408
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +CG + ++ K++H + DV L N LI MY K LAR+VFD + RN
Sbjct: 781 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 840
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
SSW+ MIS YAA G D LF ++ + PD T+ + + +E +
Sbjct: 841 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 900
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE---FVERMPFEPTVEVWEALRNFAQIH 310
M+ + G P ++++ + G L +E +V R F+ V V +L
Sbjct: 901 RMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI------ 953
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE 370
D+ +++ + L ++A+ D + N+ + VS Y ++G +E
Sbjct: 954 -DMYVKNHS------LXSAQAVFDNM--------KNRNIFAWNSLVSGYS----FKGMFE 994
Query: 371 KMKGLNGQMREAGYVPD 387
L QM + G PD
Sbjct: 995 DALRLLNQMEKEGIKPD 1011
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L + L + MGK H + + F DV + LI+MY K + A+ VFD ++
Sbjct: 915 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKN 974
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN+ +W+ ++SGY+ G D L L QM K G PD T+ + + A ++ F+
Sbjct: 975 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM 1033
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+V+S L +C + I +G +H L F DV L L+ YG+C A +VF +
Sbjct: 675 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 734
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
+ W+ I + + G+ LF +M+ + + T + V AC A+
Sbjct: 735 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 218/399 (54%), Gaps = 35/399 (8%)
Query: 109 GKVREAIEYMGQ-DASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
GK +EA+E + S +A D S L +C L ++++G +H ++ + L
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHL 407
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
LI+MY KC + + A VF + ++++ W MI+G A +G G D + LF +M++
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKV 467
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ TF + AC+ V+EG +F M+ YG++PG++HY ++ +LG AG L EA
Sbjct: 468 KPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAV 527
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS---------------- 329
E +E+MP P VW AL IH +V L ++A L +L+P
Sbjct: 528 ELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAG 587
Query: 330 --------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNG 377
+ ++ + L KK+ + +E V ++ D + Y K+ +
Sbjct: 588 KWDRVSGLRKLMRDVGL---KKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVA 644
Query: 378 QMREAGYVPDTRYVLHDIDEE-AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
++ GYVP+ ++L ++EE KE+AL HSE+LAIA+GLIST P+RI+KNLR+CG
Sbjct: 645 RLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCG 704
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH+ K++SK+ RE+++RD RFHHFR+G CSC DYW
Sbjct: 705 DCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L+ + L+ + GK H ++ DV + N LI Y KC L +VF +
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIP 198
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ SW+ MI+ + G + L LF++M P+ T + V +ACA + G +
Sbjct: 199 RRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRW 258
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ I +N G + + A++ + G + +A+ ++MP + V L +A+I
Sbjct: 259 VHSYIERNRIGESLTLSN--AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIP 337
G+ D ++ I D +P
Sbjct: 317 --------------GEYDAAQGIFDAMP 330
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 39/206 (18%)
Query: 78 GTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLL 135
G G+ N P R S+ + + + G EA+E + + + + +L
Sbjct: 188 GLGYRVFVNIPRRDVVSWNSM---ITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVL 244
Query: 136 DSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLS 195
+C E G+ VH + + + + L+N +++MY KC + A+++FD++ ++++
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304
Query: 196 SW-------------------------------HLMISGYAANGQGADGLMLFE--QMRK 222
SW + +IS Y G+ + L LF Q+ K
Sbjct: 305 SWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSK 364
Query: 223 TGPHPDKETFLVVFAACASAEAVKEG 248
T PD+ T + +ACA A+ G
Sbjct: 365 TA-KPDEVTLVSTLSACAQLGAMDLG 389
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQL 189
SL+D C K + K++H ++LRT F D ++LI L A++VFDQ+
Sbjct: 40 SLIDQCSETKQL---KQIHAQMLRTGLFF-DPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAV--- 245
NL +W+ +I YA++ L++F +M P PDK TF + A + E +
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 246 --KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
G + ++ +D I+ + H+ A LG
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELG 188
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 206/372 (55%), Gaps = 28/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L++CGNL SI K V L + F +VE+ N L+ GKC + F +
Sbjct: 553 FTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMA 612
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N SW+ I+ A +G G G+ LF+ M+ G T + V ++C+ A V +G+
Sbjct: 613 VKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYS 672
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF-EPTVEVWEALRNFAQI 309
YF M DYG EHY +I +L AG L AEEFV+R+PF + +V W L ++
Sbjct: 673 YFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKL 732
Query: 310 HGDVELEDRAEELLGDLDPSK--------------------AIVDK--IPLPPRKKQSAT 347
HGD+E RA + + L+P A V K + L P KK+
Sbjct: 733 HGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGP-KKEPGL 791
Query: 348 NMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E K R+ ++R D + +++ LN +M+ AG+V D + V++D+ + KE
Sbjct: 792 SWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESL 851
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GLIST PLRI+KNLR+C DCH+A K +S +VGRE++VRD RFHH
Sbjct: 852 LCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHH 911
Query: 464 FRDGKCSCGDYW 475
FR G CSC D+W
Sbjct: 912 FRGGACSCEDFW 923
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ ++CG+ S+E GK +H LL S + + N L+ MY + + AR++FD + R
Sbjct: 454 TVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTR 513
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW M+ ++ G + L +F + G P++ TF V AC + ++ L
Sbjct: 514 NVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLV- 572
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ ++ G +E ++ LG G L E F + M + V A+ AQ HG+
Sbjct: 573 QACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQ-HGN 631
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 121 DASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNT 179
D SA A F++L+ C L + G+R+H L LR V D L +L+ MY KC +
Sbjct: 35 DGSADA--STFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDF-LGARLLAMYCKCGSP 91
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR VF ++ +++ +W +I A +G + LF +M+ G P+ T++ V AC
Sbjct: 92 EEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC 151
Query: 240 ASAEAVKE--------GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
V G L +++ A++ G G L A + +
Sbjct: 152 GHPWEVDTIRARVEACGSLELDVIVA-----------TAVMNAYGKCGDLDSAWGVFDGI 200
Query: 292 PFEPTVEVWEALRNFAQIH--GDVELEDRAEELLGDLDPSKA 331
VW A+ + H GD LE + LG + P+K
Sbjct: 201 LVRDAA-VWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKG 241
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + ++ YGKC + A VFD + R+ + W+ MIS A+ QG + L LF QMR
Sbjct: 173 DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMR 232
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G P+K T + AC + E + G + A++ + G G +
Sbjct: 233 LGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQ-TALVNMYGKFGKV 291
Query: 282 IEAEEFVERMPFEPTVEVWEAL 303
+AEE ER+ E V W A+
Sbjct: 292 DDAEEIFERIQ-ERDVVSWNAM 312
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L++C + + R+H R A D + L+ MYGK A ++F+++++R++
Sbjct: 247 LNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDV 306
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
SW+ M++ A NG F +M G P + T++ + AC A +K G
Sbjct: 307 VSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHG 360
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 209/375 (55%), Gaps = 34/375 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L++ GNL SI K V L + F+ +VE+ N L+ GKC + K F +
Sbjct: 208 FTAVLNASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMP 267
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N SW+ I+ A +G G G+ LF+ M+ G T + V ++C+ A V +G+
Sbjct: 268 VQNQVSWNSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYS 327
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF-EPTVEVWEALRNFAQI 309
YF M DYG+ EHY +I +L AG L AEEFV+R+PF + +V W L ++
Sbjct: 328 YFLNMHVDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKL 387
Query: 310 HGDVELEDRAEELLGDLDPS-------------------------KAIVDKIPLPPRKKQ 344
HGD+E RA + + L+P K++VD P KK+
Sbjct: 388 HGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVDLGP----KKE 443
Query: 345 SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ +E K R+ ++R D + +++ LN +M+ AG+V DT+ V++D+ + K
Sbjct: 444 PGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTKAVVYDLQAKEK 503
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E L HSE+LAIA+GLIST PLRI+KNLR+C DCH+A K +S +VGRE++VRD R
Sbjct: 504 ESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYR 563
Query: 461 FHHFRDGKCSCGDYW 475
FHHFR G CSC D+W
Sbjct: 564 FHHFRGGACSCEDFW 578
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIE-MYGKCCNTRLARKVFDQLRKRN 193
L++C + + G R+H R D + L+ MY + + AR++FD + RN
Sbjct: 110 LNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRN 169
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW M+ ++ G + L +F + G P+ TF V A + +++ L +
Sbjct: 170 VISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAAKL-VQ 228
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++ G + +E ++ LG G L E +F MP + V A+ AQ HG+
Sbjct: 229 ACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQ-HGN 286
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 1/142 (0%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + ++ YGKC + AR +FD++ R+ + W+ MIS + QG + L L QMR
Sbjct: 36 DVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMR 95
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G P K T + AC + EG + G + + + G L
Sbjct: 96 LDGVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSL 155
Query: 282 IEAEEFVERMPFEPTVEVWEAL 303
+A E + M + W A+
Sbjct: 156 EDAREIFDAMTTRNVIS-WTAM 176
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 211/383 (55%), Gaps = 27/383 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q S+ Y ++SLL + L +++ GK+VH + V L N LI+MY KC N
Sbjct: 204 QREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNL 263
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAA 238
ARK+F+ + R + SW+ M+ GY+ +G+G + + LF+ MR+ PD TFL V +
Sbjct: 264 NYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSG 323
Query: 239 CASAEAVKEGFLYF-EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C+ +G F E+M I GIEHY +I +LG AG + EA E +++MPFEPT
Sbjct: 324 CSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTA 383
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM---- 349
+W +L ++H + + + L +++P A I+ + + + N+
Sbjct: 384 AIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELM 443
Query: 350 -------------LEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVL 392
+E + + ++D E K++ L + +E+GYVPD VL
Sbjct: 444 MEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVL 503
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
+D+DEE KEK L HSE+LA+A+GLIST +PLR+IKNLRIC DCHN K +SK+ GR+
Sbjct: 504 YDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQ 563
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+ +RD RFHH G CSCGDYW
Sbjct: 564 VSIRDKNRFHHVAGGICSCGDYW 586
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+D ++ LL+ C N +++ G+RVH + + ++ V L+ +LI +Y KC AR VFD
Sbjct: 10 FDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFD 69
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++R+RN+ SW MISGY+ G ++ L LF QM ++ P++ TF V ++C +
Sbjct: 70 EMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFEL 129
Query: 248 GF-LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
G ++ I K +Y E++I +++ + AG + EA E +P V
Sbjct: 130 GRQIHSHIFKRNY------ENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 303 LRNFAQIHGDVE 314
+ +AQ+ D E
Sbjct: 184 ISGYAQLGLDEE 195
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L SC E+G+++H + + + + + L++MY K AR VF+ L
Sbjct: 114 FATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ S +ISGYA G + L LF ++++ G + T+ + A + A+ G
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQ 233
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +++ + +++ ++I + G+L A + MP TV W A+
Sbjct: 234 VHSHVLRCELPFYVVLQN--SLIDMYSKCGNLNYARKIFNNMPVR-TVISWNAMLVGYSK 290
Query: 310 HG 311
HG
Sbjct: 291 HG 292
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ LL +C +L ++ GK +H L + F++DV + LI+MY K + + A KVF +++
Sbjct: 765 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 824
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ L+SW+ MI G+A G G + + +F +M+K G PD TF + +AC ++ + EG+ Y
Sbjct: 825 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 884
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M DY IVP +EHY ++ +LG AG+L EA + + MP +P +W AL +IH
Sbjct: 885 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHK 944
Query: 312 DVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNML 350
+++ + A + L L+P+ + + + + + + + +
Sbjct: 945 NLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWI 1004
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ RV + S + + Y ++ L +M++ GYVPD V ++DE K+K L
Sbjct: 1005 QINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLS 1064
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
H+E+LAI YGLI P+R+IKN RIC DCH+A K +S + REL +RD RFHHFR+
Sbjct: 1065 HTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFRE 1124
Query: 467 GKCSCGDYW 475
GKCSC D+W
Sbjct: 1125 GKCSCNDFW 1133
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
S L + MGK H + + F DV + LI+MY K + A+ VFD ++ RN+ +
Sbjct: 634 SISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFA 693
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
W+ ++SGY+ G D L L QM K G PD T+ + + A KE +F M+
Sbjct: 694 WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQ 753
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ G++P +++ S L + +E
Sbjct: 754 QE-GVMPNSASITCLLRACASLSLLQKGKE 782
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+V+S L +C + I +G +H L F DV L L+ YG+C A +VF +
Sbjct: 524 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 583
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ W+ I + + G+ LF +M+ + + T + V A S
Sbjct: 584 MPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASIS 636
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 217/396 (54%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ +A++ + D F+ S++ +C + +E+G++VH ++ DV
Sbjct: 613 QNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVF 672
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L + +I+MY KC + A +F+Q + RN+ W MISG A +GQG + + LFE M G
Sbjct: 673 LGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEG 732
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ +F+ V AC+ A ++EG YF +M+ YGI PG EH+ ++ + G AG L E
Sbjct: 733 ITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEI 792
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
+EF+ VW + + ++H ++E+ + L +L+P A
Sbjct: 793 KEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATE 852
Query: 332 --------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
I + KK + + ++ KN+V + D + Y + L G++
Sbjct: 853 HRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRL 912
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+E GY D V+ D+++E ++ L YHSE+LAIAYG+IST P P+R++KNLR+C DCH
Sbjct: 913 KEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCH 972
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
N IK S+++GRE+I+RD RFHHF+ G CSC DYW
Sbjct: 973 NFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 31/242 (12%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
L + G R A+E + + +A ++ FS L +L + +GK++H + + D
Sbjct: 495 LMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDD 554
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNL---------------SSWHLMISGYAAN 207
+ N LI+MY KC A +F L + + SW M+SGY N
Sbjct: 555 GFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQN 614
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G+ D L F M + DK T V +ACASA ++ G + +G + I H
Sbjct: 615 GRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELG-------RQVHGYIQKIGH 667
Query: 268 YI------AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
+ +II + G L +A + + V +W ++ + +HG R E
Sbjct: 668 GLDVFLGSSIIDMYVKCGSLNDAWLIFNQAK-DRNVVLWTSMISGCALHGQGREAVRLFE 726
Query: 322 LL 323
L+
Sbjct: 727 LM 728
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N L+ +Y K N A K+F+++ + ++ SW ++ISG+A G AD L LF +M+ G
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383
Query: 226 HPDKETFLVVFAACAS 241
P++ T +V +C+S
Sbjct: 384 CPNQFTLSIVLKSCSS 399
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 120 QDASASAGYDVFSSLLDSCG-NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN 178
QD S +L SC N+ +GK +H + + D LNN +++ Y KC
Sbjct: 379 QDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRC 438
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
A K+F + +++ SW++M+S Y G + LF Q+
Sbjct: 439 FGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL 480
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 201/361 (55%), Gaps = 31/361 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ +C +L ++ +GK++H + S F +V + + L++MY KC N R AR +FD++
Sbjct: 300 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 359
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW MI GYA +G D + LF++M G P+ F+ V AC+ A V E +
Sbjct: 360 LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWK 419
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M DY I+PG+EHY A+ +LG G L EA EF+ M EPT VW L ++H
Sbjct: 420 YFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 479
Query: 311 GDVELEDRAEELLGDLDPSK--AIV---------------DKIPLPPR----KKQSATNM 349
++EL ++ + L +DP A V K+ + R KK+ A +
Sbjct: 480 KNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSW 539
Query: 350 LEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E KN+V + + D Y E +K L QM GYV DT VLHD++EE K L
Sbjct: 540 IEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLC 599
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAI +G+ISTP +R+ KNLR+C DCH A K +SKIVGRE++ F+ F
Sbjct: 600 SHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV------FYFFL 653
Query: 466 D 466
D
Sbjct: 654 D 654
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L ++ GK +H + + DV + + LI+MY KC + +VF L
Sbjct: 199 LSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 258
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ + SW+ +I+G NG +GL F+QM P+ +F + ACA + G
Sbjct: 259 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 318
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I+++ + I A++ + G++ A ++M V W A+ +
Sbjct: 319 LHGYIIRSRFDGNVFIAS--ALVDMYAKCGNIRTARWIFDKMELYDMVS-WTAMIMGYAL 375
Query: 310 HG 311
HG
Sbjct: 376 HG 377
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 183 RKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF---LVVFA 237
RKVF+ + KR++ SW+ +ISG A NG D LM+ +M PD T L +FA
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFA 207
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 196/370 (52%), Gaps = 33/370 (8%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L SC ++++G+ VH + N L+ MY K R AR VFD + R
Sbjct: 155 LSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCT 214
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W +I GYA NG+G L ++ M ++G PD TF+ + AC+ A V G +F
Sbjct: 215 ITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRS 274
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M YGI PG +HY ++ +LG AG L EA + + R E VW++L ++H + E
Sbjct: 275 MVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLLGACRVHQNAE 334
Query: 315 LEDRAEELLGDLDPSKAI--------------------------VDKIPLPPRKKQSATN 348
L +RA E++ LDP+ A+ + P N
Sbjct: 335 LAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGDVARIRALMKARGVTKEPGCSWVGVN 394
Query: 349 MLEEKNRVSDY---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ V D R+ ++YR K++ + ++R GYVPDT + L D E +++ L
Sbjct: 395 GITHLFHVEDRDHPRAAEIYR----KVEEMTERIRVEGYVPDTDWALQDEVPEWRQRGLA 450
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLA+A+GL++ P P+R+ KNLR+CGDCH AIK+++K+ GRE+I+RD FHH +
Sbjct: 451 YHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKVYGREIILRDANCFHHMK 510
Query: 466 DGKCSCGDYW 475
DG+CSCGDYW
Sbjct: 511 DGECSCGDYW 520
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 163 VELNNKLIEMYGKCCNTRLARK--VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+ + N L++ Y + + A VFD++ +R++ +W +++G A G + + M
Sbjct: 80 LHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGM 139
Query: 221 RKTGPHPDKETFLVVFAACAS-----------AEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
+G PD+ ++CA+ A AV+ G F ++N
Sbjct: 140 VASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVEN------------ 187
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+++ + G L +A + MP T+ W AL
Sbjct: 188 SLVSMYAKTGALRDARAVFDAMPARCTI-TWTAL 220
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 209/384 (54%), Gaps = 26/384 (6%)
Query: 117 YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC 176
Y +D+ A + S ++ C L S+E K+ H L + D+ N L++ Y K
Sbjct: 308 YEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKW 367
Query: 177 CNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF 236
A VF+++R++N+ SW+ +I+GY +GQG + + +FEQM + G P+ TFL V
Sbjct: 368 GRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVL 427
Query: 237 AACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
+AC+ + + G+ F M D+ + P HY ++++LG G L EA E + PF+PT
Sbjct: 428 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPT 487
Query: 297 VEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK---------------------AIVDK 335
+W L ++H ++EL A E L ++P K ++
Sbjct: 488 TNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQT 547
Query: 336 IPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYV 391
+ + A +E K + + D + YEK+ + ++ GYV + + +
Sbjct: 548 LKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKAL 607
Query: 392 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGR 451
L D+DEE +++ L+YHSE+LAIA+GLI+TP PL+I + R+CGDCH+AIK ++ + GR
Sbjct: 608 LPDVDEE-EQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGR 666
Query: 452 ELIVRDNKRFHHFRDGKCSCGDYW 475
E++VRD RFHHFRDG CSCGDYW
Sbjct: 667 EIVVRDASRFHHFRDGSCSCGDYW 690
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYDV----FSSLLDSCGNLKSIEMGKRVHEL 153
+ + L LC + REA+E G+DV + +L+ +C L+SI KRV
Sbjct: 85 IQIEKLVLCN--RYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNY 142
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+ S F D+ + N+++ ++ KC ARK+FD++ +++++SW MI G+ +G ++
Sbjct: 143 MVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEA 202
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAII 272
LF M + TF + A A V+ G ++ +K G + A+I
Sbjct: 203 FGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVS--CALI 260
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G + +A ++MP E T W ++ +HG E
Sbjct: 261 DMYSKCGSIEDAHCVFDQMP-EKTTVGWNSIIASYALHGYSE 301
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 8/188 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++++ + L +++G+++H D ++ LI+MY KC + A VFDQ+
Sbjct: 220 TFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQM 279
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC---ASAEAVK 246
++ W+ +I+ YA +G + L + +MR +G D T +V C AS E K
Sbjct: 280 PEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAK 339
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ D IV A++ G + +A RM + + W AL
Sbjct: 340 QAHAALVRRGYDTDIVAN----TALVDFYSKWGRMEDAWHVFNRMRRKNVIS-WNALIAG 394
Query: 307 AQIHGDVE 314
HG E
Sbjct: 395 YGNHGQGE 402
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 208/383 (54%), Gaps = 27/383 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + Y ++S+L + L +++ GK+VH L S V L N LI+MY KC N
Sbjct: 252 QREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNL 311
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAA 238
AR++FD L +R + SW+ M+ GY+ +G+G + L LF M + PD T L V +
Sbjct: 312 TYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSG 371
Query: 239 CASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C+ +G +++++ + P +HY ++ +LG AG + A EFV++MPFEP+
Sbjct: 372 CSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSA 431
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRK----------- 342
+W L +H ++++ + L ++P A I+ + +
Sbjct: 432 AIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLM 491
Query: 343 ------KQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVL 392
K+ + +E + + ++D E K++ L+ + +EAGYVPD VL
Sbjct: 492 LKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVL 551
Query: 393 HDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
HD+DEE KEK L HSE+LA+ +GLI+TP +P+R+IKNLRIC DCHN K SKI GRE
Sbjct: 552 HDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGRE 611
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
+ +RD RFH GKCSCGDYW
Sbjct: 612 VSLRDKNRFHRIVGGKCSCGDYW 634
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 108 EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
+ ++REA+ +M + ++++L+ C ++I G+RVH + + ++ V L
Sbjct: 39 DTRLREALLHMALRG-LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRT 97
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
+LI Y KC + R AR VFD + +RN+ SW MIS Y+ G + L LF QM ++G P
Sbjct: 98 RLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEP 157
Query: 228 DKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLI 282
++ TF V +C + G ++ I+K +Y E ++ +++ + G +
Sbjct: 158 NEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNY------EAHVYVGSSLLDMYAKDGKIH 211
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
EA + +P V + +AQ+ D E
Sbjct: 212 EARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L SC +G+++H + + V + + L++MY K AR +F L
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ S +ISGYA G + L LF ++++ G + T+ V A + A+ G
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281
Query: 250 LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
++ +++++ VP Y+ ++I + G+L A + + E TV W A+
Sbjct: 282 VHNHLLRSE---VPS---YVVLQNSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAMLV 334
Query: 306 FAQIHGD 312
HG+
Sbjct: 335 GYSKHGE 341
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 211/377 (55%), Gaps = 37/377 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C NL + G++VH L+ F V ++N LI+MY KC + A+ +F ++
Sbjct: 177 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 236
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R R++ SW +I G A +GQ L L+++M G P++ TF+ + AC+ V +G
Sbjct: 237 RHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGR 296
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M DYGI P ++HY ++ +LG +G L EAE + MPF P W AL + +
Sbjct: 297 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 356
Query: 310 HGDVELEDR-AEELLGDL---DPSKAIVDKIPLPPRKKQSAT---NMLEEKNRVSD---- 358
G ++ R A+ L+ DPS I L SA+ + E + ++ D
Sbjct: 357 QGQGQMGVRIADHLVSSFKPKDPSTYI-----LLSNIYASASLWGKVSEARRKLGDMEVR 411
Query: 359 ----YRSTDL-------YRGE---------YEKMKGLNGQMR-EAGYVPDTRYVLHDIDE 397
Y S ++ Y GE + +K L +MR GYVPDT ++LHD+DE
Sbjct: 412 KDPGYSSVEVRKETEVFYAGETSHALKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDE 471
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 457
+ KEK L +HSER A+AYGL+ P P+RI+KNLR+CGDCH +K +S+I RE+IVRD
Sbjct: 472 QEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRD 531
Query: 458 NKRFHHFRDGKCSCGDY 474
R+HHF+ GKCSC D+
Sbjct: 532 ATRYHHFKGGKCSCNDF 548
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFS+L+ +C NL SI++GK+VH S + D + + L++MY KC A+ VFD +
Sbjct: 44 VFSALVKACANLGSIKLGKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSI 103
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
R +N SW M+SGYA +G+ + L LF ++
Sbjct: 104 RVKNTISWTAMVSGYAKSGRKEEALELFRRL 134
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 206/372 (55%), Gaps = 30/372 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-K 191
S L +C NL +++ GK +H + + L +I+MY KC A +VF + + K
Sbjct: 252 SALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVK 311
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ + W+ MI G+A +G + + +FEQM+ P+K TF+ + AC+ V+EG LY
Sbjct: 312 QKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLY 371
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F +M +DY I P IEHY ++ +L +G L EAE+ + MP P V +W AL N +I+
Sbjct: 372 FRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYK 431
Query: 312 DVELEDRAEELLGDLDPSK----AIVDKIPLPPRKKQSATNMLEEKNRVSDYR------- 360
D+E R ++ +DP+ ++ I + + +L EKN +S R
Sbjct: 432 DMERGYRIGRIIKGMDPNHIGCHVLLSNI-YSTSGRWNEARILREKNEISRDRKKIPGCS 490
Query: 361 STDL----------------YRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAKEKA 403
S +L R Y + + +++ AGYVP+ +LHDID EE KE A
Sbjct: 491 SIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETA 550
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GL++T P+RI+KNLR+CGDCH A K +SK+ R +IVRD R+HH
Sbjct: 551 LSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHH 610
Query: 464 FRDGKCSCGDYW 475
F DG CSC DYW
Sbjct: 611 FEDGICSCKDYW 622
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D+ N LI Y N LA+++FD +R+R++ SW +I+GY G + L F +M
Sbjct: 179 RDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKM 238
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIA-IIKVLGSA 278
+ GP P++ T + AAC++ A+ +G +++ I K G + E +A II +
Sbjct: 239 LQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGK---GEIKMNERLLASIIDMYAKC 295
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + A + V +W A+ +HG
Sbjct: 296 GEIESASRVFFEHKVKQKVWLWNAMIGGFAMHG 328
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y SL+DSC KS++ K+ H L T+A + NKL+++ C + A K+FD
Sbjct: 16 YSRLVSLIDSC---KSMQQIKQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFD 71
Query: 188 QLRKRNLSSWHLMISGYAANGQGA-DGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAV 245
Q+ + +L ++ MI ++ + + L++F + + G P++ +F+ F+AC + V
Sbjct: 72 QIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGV 131
Query: 246 KEG 248
+EG
Sbjct: 132 QEG 134
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 211/393 (53%), Gaps = 27/393 (6%)
Query: 110 KVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
K REA+E G+ F+S L+SC L+ IE GK +H +
Sbjct: 329 KHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGG 388
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
L+ MY KC A VF + ++N+ SW+ +I G A +G G L LF QM + G P
Sbjct: 389 SLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDP 448
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
D T + +AC+ + +++ +F + IEHY +++ VLG G L EAE
Sbjct: 449 DGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAV 508
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE--------------LLGDLDPSKAIV 333
V MP + VW AL + + H +++L RA LL +L S +
Sbjct: 509 VMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRW 568
Query: 334 DKIPLPPRK-------KQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREA 382
++ L RK K+ ++ L K + + S D L Y+K++ L +++E
Sbjct: 569 AEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKEL 628
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GYVPD ++ LHD++ E KE+ L YHSERLAIA+GL+ST + ++KNLR+CGDCHNAI
Sbjct: 629 GYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAI 688
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K+M+KIV RE++VRD+ RFH F++G CSCGDYW
Sbjct: 689 KLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 80 GHSQN--TNDPLRGNAQLESLDV-----NLLSLCKEGKVREAI----EYMGQDASASAGY 128
G+ N +D L+ Q+ S DV + L GK +A+ + + S+G
Sbjct: 190 GYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSG- 248
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
V L + + + +G ++H + + + D ++ L+ Y C A +VF
Sbjct: 249 -VLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFG 307
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +++ W +++GY N + + L +F +M + P++ +F +C E ++
Sbjct: 308 EVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIER 367
Query: 248 G 248
G
Sbjct: 368 G 368
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 161 KDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+DV N +I +G C N R+ A ++F Q+ R++ SW MI+G NG+ L+LF
Sbjct: 179 RDVAAWNAMI--HGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFR 236
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMK-NDYGIVPGIEHYIAIIKVLG 276
M +G + +A A A + G ++ + K D+ + +++ V
Sbjct: 237 DMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDW----HFDEFVSASLVTF 292
Query: 277 SAG-HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK 335
AG +EA V +V +W AL +G + A E+ G++ +D
Sbjct: 293 YAGCKQMEAACRVFGEVVYKSVVIWTALLTG---YGLNDKHREALEVFGEMMR----IDV 345
Query: 336 IPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG---------QMREAGYVP 386
+P + S T+ L + D + KM +G + GYV
Sbjct: 346 VP----NESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVS 401
Query: 387 DTRYVLHDIDEE 398
D YV I+E+
Sbjct: 402 DAVYVFKGINEK 413
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 207/375 (55%), Gaps = 40/375 (10%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C +L + ++G ++ + D + N +I MY KC ARKVFD
Sbjct: 524 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFD 583
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++ SW+ MI+GY+ +G G + +F+ + K G PD +++ V + C+ + V+E
Sbjct: 584 FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQE 643
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G YF++MK + I PG+EH+ ++ +LG AGHL EA++ ++ MP +PT EVW AL +
Sbjct: 644 GKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 703
Query: 308 QIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSA 346
+IHG+ EL + A + + +LD S ++ KI KK
Sbjct: 704 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPG 763
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYV--PDTRYVLHDIDEEAK 400
+ +E N+V +++ D+ + +K+ L ++ GYV TR +H
Sbjct: 764 YSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIH------- 816
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
HSE+LA+A+GL++ P MP+ I+KNLRICGDCH IK++S + GRE ++RD R
Sbjct: 817 ------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVR 870
Query: 461 FHHFRDGKCSCGDYW 475
FHHF G CSCGDYW
Sbjct: 871 FHHFNGGSCSCGDYW 885
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-EL 153
S ++ + +L + G+VREA++ + S D ++S L +C L S+ GK++H ++
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 316
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+R + D + + L+E+Y K + A+ VF+ L RN +W ++ISG+ G +
Sbjct: 317 IRNLPHI-DPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 375
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ LF QMR D+ + + C S
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCS 403
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G E++E Q + D F+ +L+ C + + +G+++H L S ++ V ++
Sbjct: 370 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 429
Query: 167 NKLIEMYGKC-------------------------------CNTRLARKVFDQLRKRNLS 195
N LI MY KC N AR+ FD + ++N+
Sbjct: 430 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 489
Query: 196 SWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ M+ Y +G DGL +++ M + PD T++ +F CA A K G +I
Sbjct: 490 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLG---DQI 546
Query: 255 MKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ G++ A+I + G ++EA + + + + V W A+ HG
Sbjct: 547 IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVS-WNAMITGYSQHG- 604
Query: 313 VELEDRAEELLGDL 326
+ +A E+ D+
Sbjct: 605 --MGKQAIEIFDDI 616
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A ++FD + +R++ SW++M+S + +G+ + L + M+ G
Sbjct: 228 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIE 283
D T+ ACA +++ G L+ ++++N +P I+ Y+ A++++ +G E
Sbjct: 288 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRN----LPHIDPYVASALVELYAKSGCFKE 343
Query: 284 AE 285
A+
Sbjct: 344 AK 345
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 208/369 (56%), Gaps = 27/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+G+ +H+ +R V++N LI+MY KC + A VF + R
Sbjct: 244 SVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W +M+ YA +G G + + +FE+M+K G PD TFL V AC+ + V EG YF
Sbjct: 304 DKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF 363
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ +YGIV GI+HY + +L +G L A +F++ +P +PT +W L + HGD
Sbjct: 364 DSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGD 422
Query: 313 VELEDRAEELLGDLDPSKA---IVDKIPLPPRKKQSATNM------------------LE 351
V++ R E + +LD S ++ + NM +E
Sbjct: 423 VDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIE 482
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLH-DIDEEAKEKALQY 406
N V ++ + D ++ + + Q++ GYVP+T +V H ++ EE K +L+Y
Sbjct: 483 IDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRY 542
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI++GL++T P LRI+KNLR+C DCH+ K++S + R +I+RD RFHHF D
Sbjct: 543 HSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 602
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 603 GVCSCGDYW 611
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C + ++ E G++ H + + + + LI MY +C + R AR +FD++
Sbjct: 141 FVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMD 200
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ S++ MI+ + + L+LF +M+ G P T + V +ACA A++ G
Sbjct: 201 GECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELG 258
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 207/375 (55%), Gaps = 40/375 (10%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C +L + ++G ++ + D + N +I MY KC ARKVFD
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFD 563
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++ SW+ MI+GY+ +G G + +F+ + K G PD +++ V + C+ + V+E
Sbjct: 564 FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G YF++MK + I PG+EH+ ++ +LG AGHL EA++ ++ MP +PT EVW AL +
Sbjct: 624 GKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 683
Query: 308 QIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSA 346
+IHG+ EL + A + + +LD S ++ KI KK
Sbjct: 684 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPG 743
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYV--PDTRYVLHDIDEEAK 400
+ +E N+V +++ D+ + +K+ L ++ GYV TR +H
Sbjct: 744 YSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIH------- 796
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
HSE+LA+A+GL++ P MP+ I+KNLRICGDCH IK++S + GRE ++RD R
Sbjct: 797 ------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVR 850
Query: 461 FHHFRDGKCSCGDYW 475
FHHF G CSCGDYW
Sbjct: 851 FHHFNGGSCSCGDYW 865
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-EL 153
S ++ + +L + G+VREA++ + S D ++S L +C L S+ GK++H ++
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+R + D + + L+E+Y K + A+ VF+ L RN +W ++ISG+ G +
Sbjct: 297 IRNLPHI-DPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 355
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ LF QMR D+ + + C S
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCS 383
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G E++E Q + D F+ +L+ C + + +G+++H L S ++ V ++
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 409
Query: 167 NKLIEMYGKC-------------------------------CNTRLARKVFDQLRKRNLS 195
N LI MY KC N AR+ FD + ++N+
Sbjct: 410 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 469
Query: 196 SWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ M+ Y +G DGL +++ M + PD T++ +F CA A K G +I
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLG---DQI 526
Query: 255 MKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ G++ A+I + G ++EA + + + + V W A+ HG
Sbjct: 527 IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVS-WNAMITGYSQHG- 584
Query: 313 VELEDRAEELLGDL 326
+ +A E+ D+
Sbjct: 585 --MGKQAIEIFDDI 596
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A ++FD + +R++ SW++M+S + +G+ + L + M+ G
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIE 283
D T+ ACA +++ G L+ ++++N +P I+ Y+ A++++ +G E
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRN----LPHIDPYVASALVELYAKSGCFKE 323
Query: 284 AE 285
A+
Sbjct: 324 AK 325
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 204/372 (54%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS++ SC L S+ G+ VH + ++ +++ LI+MY KC AR VF+ +
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN+ SW+ MI G A NG D L LFE M + PD TF+ + +AC +++G
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ + N +G+ P ++HY ++ +LG G + +A ++ M +P +W L +
Sbjct: 444 EYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICST 503
Query: 310 HGDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATN 348
GD+ + A L +LDP+ A+ + + KK + +
Sbjct: 504 KGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFS 563
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E N V + S D E YEK+ L G+++E G+ P+T VLHD+ E+ K K++
Sbjct: 564 WIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSI 623
Query: 405 QYHSERLAIAYGLISTPPRM-PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+HSE+LA+A+GLI P + P+RIIKN+RIC DCH +K S+I+GR++I+RD+ RFHH
Sbjct: 624 CFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHH 683
Query: 464 FRDGKCSCGDYW 475
F GKCSC D W
Sbjct: 684 FSTGKCSCNDNW 695
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L++ L + GK++H + F+ +V + N L +MY KC AR +FD L K+
Sbjct: 160 SILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKK 219
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
NL SW+LMISGYA NGQ + L QMR +G PD+ T + AA V E
Sbjct: 220 NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEA 275
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKL 169
+R++++ + ++A++ + ++ L+ C I KR+ + F D L+N+L
Sbjct: 7 LRQSVDLLCSRSTATS--EAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQL 64
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ +Y K R A+ +FD++ KR+ SW+ ++S YA +G + F++M P D
Sbjct: 65 LHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRM----PFRDS 120
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
++ A + +E F+ M+ + G P I+ +L ++ L++
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQRE-GFEPT---EYTIVSILNASAQLLD------ 170
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQS--AT 347
LR QIHG + + + LG++ A+ D +Q+
Sbjct: 171 -------------LRYGKQIHGSIIVRN----FLGNVFIWNALTDMYAKCGEIEQARWLF 213
Query: 348 NMLEEKNRVSDYRSTDLY--RGEYEKMKGLNGQMREAGYVPD 387
+ L +KN VS Y G+ EK GL QMR +G++PD
Sbjct: 214 DCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+R S + D + +I Y +C AR+VF + +++++ W M+ GYA NG+ D
Sbjct: 247 MRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDA 306
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI---- 269
L+LF +M PD T V ++CA ++ G + I+ G+ + +
Sbjct: 307 LLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-----QAVHGKSILAGLNNNLLVSS 361
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A+I + G + +A MP V W A+
Sbjct: 362 ALIDMYSKCGFIDDARSVFNLMPTRNVVS-WNAM 394
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 204/372 (54%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS++ SC L S+ G+ VH + ++ +++ LI+MY KC AR VF+ +
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RN+ SW+ MI G A NG D L LFE M + PD TF+ + +AC +++G
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ + N +G+ P ++HY ++ +LG G + +A ++ M +P +W L +
Sbjct: 444 EYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICST 503
Query: 310 HGDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATN 348
GD+ + A L +LDP+ A+ + + KK + +
Sbjct: 504 KGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFS 563
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E N V + S D E YEK+ L G+++E G+ P+T VLHD+ E+ K K++
Sbjct: 564 WIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSI 623
Query: 405 QYHSERLAIAYGLISTPPRM-PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+HSE+LA+A+GLI P + P+RIIKN+RIC DCH +K S+I+GR++I+RD+ RFHH
Sbjct: 624 CFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHH 683
Query: 464 FRDGKCSCGDYW 475
F GKCSC D W
Sbjct: 684 FSTGKCSCNDNW 695
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L++ L + GK++H + F+ +V + N L +MY KC AR +FD L K+
Sbjct: 160 SILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKK 219
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
NL SW+LMISGYA NGQ + L QMR +G PD+ T + AA V E
Sbjct: 220 NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEA 275
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKL 169
+R++++ + ++A++ + ++ L+ C I KR+ + F D L+N+L
Sbjct: 7 LRQSVDLLCSRSTATS--EAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQL 64
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+ +Y K R A+ +FD++ KR++ SW+ ++S YA +G + F++M P D
Sbjct: 65 LHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRM----PFRDS 120
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
++ A + +E F+ M+ + G P I+ +L ++ L +
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQRE-GFEPT---EYTIVSILNASAQLSD------ 170
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQS--AT 347
LR QIHG + + + LG++ A+ D +Q+
Sbjct: 171 -------------LRYGKQIHGSIIVRN----FLGNVFIWNALTDMYAKCGEIEQARWLF 213
Query: 348 NMLEEKNRVSDYRSTDLY--RGEYEKMKGLNGQMREAGYVPD 387
+ L +KN VS Y G+ EK GL QMR +G++PD
Sbjct: 214 DCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+R S + D + +I Y +C AR+VF + +++++ W M+ GYA NG+ D
Sbjct: 247 MRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDA 306
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI---- 269
L+LF +M PD T V ++CA ++ G + I+ G+ + +
Sbjct: 307 LLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-----QAVHGKSILAGLNNNLLVSS 361
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A+I + G + +A MP V W A+
Sbjct: 362 ALIDMYSKCGFIDDARSVFNLMPTRNVVS-WNAM 394
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 208/380 (54%), Gaps = 28/380 (7%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
A A +S+L +C L +E+G++VH + + +D+ LNN L++MY KC +
Sbjct: 209 ADFVADQSTLTSVLRACTGLALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLED 266
Query: 182 ARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
A +F ++ ++++ SW MI+G A NG AD L LFE M+ GP P+ T L V AC+
Sbjct: 267 ANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACS 326
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
A V +G+ YF+ MK +GI PG EHY II +LG AG L EA + + M EP W
Sbjct: 327 HAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTW 386
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLP 339
L ++H +V+L A + + LDP+ A + K+
Sbjct: 387 RILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTR 446
Query: 340 PRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMK----GLNGQMREAGYVPDTRYVLHDI 395
KK + +E +V + D E++K L ++ GYVPDT +VL D+
Sbjct: 447 GVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDL 506
Query: 396 DEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
+ E E +LQYHSE+LAI +GL+S P + + I KNLRICGDCH K++S++ R +++
Sbjct: 507 EGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVI 566
Query: 456 RDNKRFHHFRDGKCSCGDYW 475
RD R+HHFR G CSCGDYW
Sbjct: 567 RDPIRYHHFRGGVCSCGDYW 586
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C L ++ +++H + DV + + LI+ Y K A VF+++
Sbjct: 120 YSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMI 176
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+L W+ +I G+A N G + L L+++M++ D+ T V AC ++ G
Sbjct: 177 TGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQ 236
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++K D ++ A++ + G L +A RM E V W +
Sbjct: 237 VHVHVLKYDQDLILN----NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTM 286
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 125 SAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
SA +S L+ C +++ + VHE + ++ + L N LI MY K AR
Sbjct: 13 SADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARN 72
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+FD++ RN+ SW MIS Y+ + L M + G P+ T+ V AC
Sbjct: 73 LFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC 127
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 208/369 (56%), Gaps = 27/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+G+ +H+ +R V++N LI+MY KC + A VF + R
Sbjct: 244 SVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W +M+ YA +G G + + +FE+M+K G PD TFL V AC+ + V EG YF
Sbjct: 304 DKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF 363
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ +YGIV GI+HY + +L +G L A +F++ +P +PT +W L + HGD
Sbjct: 364 DSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGD 422
Query: 313 VELEDRAEELLGDLDPSKA---IVDKIPLPPRKKQSATNM------------------LE 351
V++ R E + +LD S ++ + NM +E
Sbjct: 423 VDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIE 482
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLH-DIDEEAKEKALQY 406
N V ++ + D ++ + + Q++ GYVP+T +V H ++ EE K +L+Y
Sbjct: 483 IDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRY 542
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI++GL++T P LRI+KNLR+C DCH+ K++S + R +I+RD RFHHF D
Sbjct: 543 HSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 602
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 603 GVCSCGDYW 611
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C + ++ E G++ H + + + + LI MY +C + R AR +FD++
Sbjct: 141 FVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMD 200
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ S++ MI+ + + L+LF +M+ G P T + V +ACA A++ G
Sbjct: 201 GECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELG 258
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 211/367 (57%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+LD+C +L ++ GKRVH + R +V + +++MY KC A + F ++ + +
Sbjct: 3 VLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHD 62
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
SW M++ +A +G L F++M++ G P+ TF+ + +AC+ V+EG YF+
Sbjct: 63 TVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFD 122
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+M YGI P +HY ++ +LG AG+L EAE F+ RMP P V ++L + + + DV
Sbjct: 123 LMTARYGIAPDAQHYACMVDLLGRAGYLDEAEGFLNRMPGAPHAAVLKSLLSACRSYKDV 182
Query: 314 ELEDR-AEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
+ +R A+ +L G + + I + +K + +E
Sbjct: 183 DRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEV 242
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+ RV ++ + D+ + K++ L+ M++AGYVPDT VLHD+ EE KE+ L +HS
Sbjct: 243 EGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLWHS 302
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL++TP P+R+IKNLR+C DCH+A K++S I R ++ RD RFHHF +G
Sbjct: 303 EKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFENGV 362
Query: 469 CSCGDYW 475
CSCGDYW
Sbjct: 363 CSCGDYW 369
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 211/394 (53%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G ++A++ Q S + D ++ +L +C L ++++G L+ + F+ + L
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC + A ++F +++++ W+ M+ G + NG LF + K G
Sbjct: 355 TALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR 414
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD+ TF+ + C V EG +F MK + + P IEHY ++ +LG AG L EA +
Sbjct: 415 PDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ 474
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP------------------ 328
+ MP +P VW AL ++H D L ++ + L +L+P
Sbjct: 475 LINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHR 534
Query: 329 ---SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMRE 381
++ I + +K A + +E V ++ D L Y K+ L +++
Sbjct: 535 WEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKA 594
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
G+VP T +VL DI+EE KE L YHSE+LA+A+GLI++PP +R++KNLR+CGDCH+A
Sbjct: 595 VGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDA 654
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++SKI RE+I+RD RFH F DG CSC DYW
Sbjct: 655 IKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G REAI + D FS +L +C L G+ + + S ++V +
Sbjct: 194 GHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC N A +F + ++++ SW MI GYA NG L LF QM+
Sbjct: 254 TSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLK 313
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIM-KNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD T + V +ACA+ A+ G +M +N++ P + A+I + G + +A
Sbjct: 314 PDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAW 371
Query: 286 EFVERMPFEPTVEVWEAL 303
E M + V VW A+
Sbjct: 372 EIFTAMKRKDRV-VWNAM 388
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C + +G ++H LL + + DV + L+ +Y KC N A KVFD + +N
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW +I+GY ++G + + F+++ + G PD + + V AACA G + +
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG-EWID 238
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+D G+ + +++ + G+L A MP E + W +
Sbjct: 239 RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTM 287
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 176 CC-----NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
CC +T ++ VF Q+++ N+ W+ MI G + D + L+ MR G P+
Sbjct: 56 CCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNF 115
Query: 231 TFLVVFAACASAEAVKEGF 249
T V ACA V+ G
Sbjct: 116 TIPFVLKACARKLDVRLGL 134
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 208/369 (56%), Gaps = 27/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+G+ +H+ +R V++N LI+MY KC + A VF + R
Sbjct: 244 SVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W +M+ YA +G G + + +FE+M+K G PD TFL V AC+ + V EG YF
Sbjct: 304 DKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF 363
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ +YGIV GI+HY + +L +G L A +F++ +P +PT +W L + HGD
Sbjct: 364 DSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGD 422
Query: 313 VELEDRAEELLGDLDPSKA---IVDKIPLPPRKKQSATNM------------------LE 351
V++ R E + +LD S ++ + NM +E
Sbjct: 423 VDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIE 482
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLH-DIDEEAKEKALQY 406
N V ++ + D ++ + + Q++ GYVP+T +V H ++ EE K +L+Y
Sbjct: 483 IDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRY 542
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI++GL++T P LRI+KNLR+C DCH+ K++S + R +I+RD RFHHF D
Sbjct: 543 HSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 602
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 603 GVCSCGDYW 611
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIE 145
N LRG A+ C E R + M ++ A Y F SLL +C + ++ E
Sbjct: 103 NTLLRGYARGGWG-----GGCAEEAARVFVRMM-EEGVAPDTY-TFVSLLKACASARAGE 155
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
G++ H + + + + LI MY +C + R AR +FD++ + S++ MI+
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASV 215
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ + L+LF +M+ G P T + V +ACA A++ G
Sbjct: 216 RSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELG 258
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 182 ARKVFDQLRKRNLSSWH-LMISGYAANGQ----GADGLMLFEQMRKTGPHPDKETFLVVF 236
AR+VFD++ W+ ++ GYA G + +F +M + G PD TF+ +
Sbjct: 86 ARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLL 145
Query: 237 AACASAEAVKEGFLYFEIMKNDYGI---VPGIEH-YIA--IIKVLGSAGHLIEAEEFVER 290
ACASA A +EG + +G+ EH Y+A +I + G + A +R
Sbjct: 146 KACASARAGEEG-------RQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDR 198
Query: 291 MPFEPTV 297
M E V
Sbjct: 199 MDGECVV 205
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 216/385 (56%), Gaps = 30/385 (7%)
Query: 118 MGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
MGQ A A Y+VF+ S + + NL I+ GK+VH + + E+ N LI +YGK
Sbjct: 539 MGQ---AGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGK 595
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C + A+ +F ++ RN SW+ +I+ + +G+G + L LF+QM++ G P+ TF+ V
Sbjct: 596 CGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGV 655
Query: 236 FAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
AAC+ V+EG YF+ M N YG+ P +HY ++ +LG AG L A FV+ MP
Sbjct: 656 LAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITA 715
Query: 296 TVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-----------SKAIVDKIP------- 337
+W L + ++H ++E+ + A + L +L+P + A+ K
Sbjct: 716 NAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRK 775
Query: 338 -LPPR--KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRY 390
+ R +K+ + +E KN V + D L Y+ + LN ++ + GY +
Sbjct: 776 MMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPN 835
Query: 391 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
+ H+ ++E K+ HSE+LA+A+GL++ PP +PLR+IKNLR+C DCH+ +K S++
Sbjct: 836 LFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTR 895
Query: 451 RELIVRDNKRFHHFRDGKCSCGDYW 475
RE+++RD RFHHF G CSCGDYW
Sbjct: 896 REIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C IE+G+++H L + F D+ ++ LI+MY K ARK+ + L
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR++ SW MI+GY + + L F++M+ G PD +ACA +A+++G
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L +C K G+ +H + AF + + N LI +Y + +LA +VF +
Sbjct: 146 VLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDM 205
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +++ +ISG+A G G L +F++M+ +G PD T + AACAS +++G
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKG 264
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C ++ ++ GK++H L + D L+++Y KC + A +F+ +
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+LM+ Y A +F QM+ TG HP++ T+ + C ++ G
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELG 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S +C +K++ G ++H + S + D+ + N L+ +Y +C + A +F ++
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ +W+ +ISG+ + LM+F +M + G + TF+ +A A+ +K+G
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +K G E A+I + G G + +A+ M V W +
Sbjct: 570 VHGRAVKT--GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQ 626
Query: 310 HG 311
HG
Sbjct: 627 HG 628
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D + N LI++Y K AR+VF +L R+ SW M+SGYA +G G + L+ QM
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMH 136
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
T P V +AC + +G ++ ++ K + + + A+I + G
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN--ALIALYLGFGS 194
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQI-HGDVELEDRAEELLGDLDPSKAIV 333
AE M F V + AQ HG+ L+ E L L P V
Sbjct: 195 FKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTV 248
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 210/373 (56%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F SL+ + ++ + G+R+H L + F D + N L+ MY +C A +VFD++
Sbjct: 458 TFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
N+ SW MISG A +G A L LF M G P+ T++ V +AC+ A VKEG
Sbjct: 518 NDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGK 577
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F +M+ +G++P +EHY ++ +LG +G + +A +F+ MP + VW+ L +
Sbjct: 578 EHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKT 637
Query: 310 HGDVELEDRAEE--------------LLGDLDPSKAIVDKIPLPPRKKQSATNMLEEK-- 353
H ++++ + A LL +L + D++ R N+++EK
Sbjct: 638 HNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVA-RIRSLMRDKNLMKEKGL 696
Query: 354 ------NRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
N + ++R+ D + Y K++ L +++ GYVPDT VLHD+ +E KE
Sbjct: 697 SWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELC 756
Query: 404 LQYHSERLAIAYGLIS-TPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSE++A+A+GLIS T P+RI KNLR+C DCH+A+K +SK GRE+I+RD+ RFH
Sbjct: 757 LLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFH 816
Query: 463 HFRDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 817 RMKDGECSCGEYW 829
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL---ARKVF 186
SS+L +C L S +G+++H L D ++ L++MY K N + AR+VF
Sbjct: 257 TLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVF 316
Query: 187 DQLRKRNLSSWHLMISGYAANG-QGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+++ K N+ +W ++SGY G Q ++LF +M G P+ T+ + ACA+
Sbjct: 317 NRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACAN 372
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 144 IEMGKRVH-ELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHL 199
I +G+ + LLRT + ++ D + N L+ +Y KC AR VFD + R+L SW
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY 259
M S + NG A+ L LF + + G P+ F CA+ +A L+
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPN------AFTLCAATQACFASELFHLAGGAVL 176
Query: 260 GIVPGIEHY-------IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQIHG 311
G+V + + A+I + G L+ + + FE TV VW L +AQ
Sbjct: 177 GLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGL-FERTVVVWTLLITRYAQ--- 232
Query: 312 DVELEDRAEELLGDL 326
D A EL D+
Sbjct: 233 -SGYSDEAVELFLDM 246
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + LI+M+ K + R+VFD L +R + W L+I+ YA +G + + LF M
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDML 247
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEI-----MKNDYGIVPGIEHYIAIIKVLG 276
+ G PD+ T + +AC + + G + +++D + G+ + +
Sbjct: 248 ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGL---VDMYAKSH 304
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ L A E RMP + V W AL
Sbjct: 305 NGQSLHNAREVFNRMP-KHNVMAWTAL 330
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SS+L +C NL + G+++H S + N L+ MY + + AR FDQL
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
++N+ S+ SG +G G Q+ + TF + +A AS + +G
Sbjct: 422 YEKNMVSF----SG-NLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQ 476
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
L+ +K +G I + +++ + G+L++A + + M + V W ++ +
Sbjct: 477 RLHALSLKAGFGSDRAIGN--SLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLA 533
Query: 309 IHGDVELEDRAEELLGDL 326
HG RA EL D+
Sbjct: 534 KHG---YAARALELFHDM 548
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 220/376 (58%), Gaps = 36/376 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS +L++C ++ ++E G +H S DV + + L++MY KC A K+F+ +
Sbjct: 688 FSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT 747
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+RN SW+ MISGYA +G G + +FE+M ++ PD TF+ V +AC+ A V+ G
Sbjct: 748 QRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLE 807
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YFE+M D+GI+P IEHY +I +LG AG + + +E+++RMP EP +W + +
Sbjct: 808 YFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQS 866
Query: 311 GD---VELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEE--KNRVSDYRSTD-- 363
D ++L A +L +++P + + +AT M E+ K R + ++T+
Sbjct: 867 KDGSNIDLGREASRVLLEIEPQNPVNYVL---ASNFHAATGMWEDTAKARTAMRQATEKK 923
Query: 364 ---------------LYRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
G+ YEK+ L +R AGYVP T Y L+D++EE
Sbjct: 924 EAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEEN 983
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KE+ L YHSE+LAIA+ +++ P+RI+KNLR+CGDCH A + +S+++ R++I+RD+
Sbjct: 984 KEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVCGDCHIAFRYISQMISRQIILRDSI 1042
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF+DGKCSCGDYW
Sbjct: 1043 RFHHFKDGKCSCGDYW 1058
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +LL + L +E+GK+VH + ++D ++N LI Y K + +F +
Sbjct: 586 FINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMS 645
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ SW+ MISGY NG + + M +G D TF ++ ACAS A++ G
Sbjct: 646 DRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGM 705
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLK 142
D + N + +LD N G EA+ + M Q + + + + SSL SC LK
Sbjct: 444 TDRISWNTIISALDQN-------GNCEEAVMHYSLMRQSCISPSNFALISSL-SSCAGLK 495
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+ G++VH D ++N L++MYG+C KVF+ + + + SW+ M+
Sbjct: 496 LLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM- 554
Query: 203 GYAANGQG--ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
G A+ Q ++ + +F M + G P+K TF+ + AA + ++ G
Sbjct: 555 GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELG 602
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ L N L+ Y K A +VFD++ +RN SW ++SGY +G + +F M
Sbjct: 95 DLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAML 154
Query: 222 K---TGPHPDKETFLVVFAACASAEAVKEGF---LYFEIMKNDYGIVPGIEHYIAIIKVL 275
+ G P TF + AC + GF ++ + K +Y + + A+I +
Sbjct: 155 REVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCN--ALISMY 212
Query: 276 GS--AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
GS G I A+ + P + W AL + GDV
Sbjct: 213 GSCTVGPPILAQRVFDGTPIRDLI-TWNALMSVYAKKGDV 251
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 97 SLDVNLLSLCKEGKVREAIE-YMGQDASASAGYDVFSSLLDSCGNL----KSIEMGKRVH 151
+L+ ++ L ++ EA++ ++G + D + LL + + + +G+ VH
Sbjct: 343 TLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVH 402
Query: 152 -ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
+LRT + ++N L+ MY KC A K+F + + SW+ +IS NG
Sbjct: 403 GHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNC 462
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +M + MR++ P + ++CA + + G
Sbjct: 463 EEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAG 500
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 131 FSSLLDSC--GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR--LARKVF 186
F +LL +C G + +VH L+ + + + + N LI MYG C LA++VF
Sbjct: 168 FGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVF 227
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP----HPDKETF 232
D R+L +W+ ++S YA G A LF+ M++ P + TF
Sbjct: 228 DGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTF 277
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 194/355 (54%), Gaps = 26/355 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H L FV + L + L++MY +C +R VF+ +R ++L W MI+ Y
Sbjct: 639 GKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGM 698
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
+G G + LF +M PD F+ V AC+ + + EG + E MK +Y + P E
Sbjct: 699 HGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPE 758
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
HY+ ++ +LG A HL EA +FV+ M EPT EVW AL QIH + EL + A + L ++
Sbjct: 759 HYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEM 818
Query: 327 DPSK----AIVDKIPLPPR-----------------KKQSATNMLEEKNRVSDYRSTDLY 365
DP +V + R KK + +E N+V + + D
Sbjct: 819 DPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKS 878
Query: 366 RGE----YEKMKGLNGQM-REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIST 420
+ Y K+ + ++ +E GYV T++VLH+ EE K + L HSERLAIAYG+++T
Sbjct: 879 HPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTT 938
Query: 421 PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P LRI KNLR+CGDCHN K++SK REL++RD RFHHF+ G CSCGD W
Sbjct: 939 PEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
F +L +CG LK G VH L +V V + N ++ MY KC + AR++FD++
Sbjct: 219 FPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 278
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
K ++ SW+ MIS Y++NGQ + L LF +M+K P+ TF+ AC + +K+G
Sbjct: 279 EKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM 338
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
F++ ++K+ Y I + + A+I + G + EA M T+ L F Q
Sbjct: 339 FIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ 396
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 101 NLLSLCKEGKVREAIE-----YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELL 154
+L +CK G V EA + + Q S + + +SS+L+ CG+ K++ G++VH ++
Sbjct: 82 SLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMI 141
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
++A V L+ +L+ MYGKC A K+FD + + + +W+ MI Y NG+ L
Sbjct: 142 TSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSL 201
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACA-------SAE----AVKEGFLYFEIMKNDYGIVP 263
L+ +MR +G D TF + AC AE A+KEG++ + N
Sbjct: 202 ELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVAN------ 255
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+I+ + L A + +RMP + V W ++
Sbjct: 256 ------SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 289
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 109 GKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EA+ G Q AS + F + L +C + I+ G +H + S++ +V +
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI MY + A +F + + SW+ M+SG+ NG + L + +MR G
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416
Query: 227 PDKETFLVVFAACA 240
PD + + AA A
Sbjct: 417 PDLVAVISIIAASA 430
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 37/290 (12%)
Query: 22 NSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGH 81
+S I + H+ LKSS + + A N + RF K +
Sbjct: 331 SSFIKQGMFIHATVLKSSYYINVFVA----NALIAMYARFGKMGE---------AANIFY 377
Query: 82 SQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCG 139
+ + D + N+ L N G EA+++ + A D+ + S++ +
Sbjct: 378 NMDDWDTISWNSMLSGFVQN-------GLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 430
Query: 140 NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
+ G ++H + D+++ N L++MY K C+ + +FD++ +++ SW
Sbjct: 431 RSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 490
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE---AVKEGFLYFEIMK 256
+I+G+A NG + L LF +++ G D + AC+ + +VKE
Sbjct: 491 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE--------I 542
Query: 257 NDYGIVPGIEHYI---AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ Y I G+ + I+ V G G++ A E + F+ V W ++
Sbjct: 543 HSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSM 591
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 219/397 (55%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA+E + + D F S+L +C L S+++G +HE + + +V
Sbjct: 186 QNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVV 245
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L+ M+ +C + AR VFD + + N+ SW MISGY +G G + + +F +M+ G
Sbjct: 246 LATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACG 305
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T++ V +ACA A + EG L F MK +YG+VPG+EH++ ++ + G G L EA
Sbjct: 306 VVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEA 365
Query: 285 EEFVERMPFEPTV-EVWEALRNFAQIHGDVELEDRAEE---------------------L 322
+FV + E V VW A+ ++H + +L E L
Sbjct: 366 YQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYAL 425
Query: 323 LGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
G +D +++ + + KKQ + ++ +NR + D E Y + L +
Sbjct: 426 AGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWR 485
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
++AGY P +H+++EE +E AL+YHSE+LA+A+GL+ T + LRI+KNLRIC DC
Sbjct: 486 CKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDC 545
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H+AIK +S ++ RE+IVRD RFHHFR+G CSC DYW
Sbjct: 546 HSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S++ +C +L + +G VH + S + + + L+ Y K C R+ARKVFD++
Sbjct: 111 FTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W+ MISGY NG ++ + +F +MR++G PD TF+ V +AC+ ++ G
Sbjct: 171 QRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCW 230
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
E + GI + +++ + G + A + M E V W A+ + +H
Sbjct: 231 LHECIVGT-GIRMNVVLATSLVNMFSRCGDVGRARAVFDSMN-EGNVVSWTAMISGYGMH 288
Query: 311 G 311
G
Sbjct: 289 G 289
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 219/399 (54%), Gaps = 30/399 (7%)
Query: 107 KEGKVREAIEYMGQ----DASASAGYDVFSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVK 161
+ G+ EA+E Q D S L +C L ++ G+++H +LR
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+ + N LI+MY K + AR VFD + +RN SW +++GY +G+G + L +F +M+
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
K PD TF+VV AC+ + V +G YF M D+G+VPG EHY ++ +L AG L
Sbjct: 593 KVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDKIP 337
EA E + MP +PT VW AL + +++ +VEL + A L +L D S ++ I
Sbjct: 653 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 712
Query: 338 LPPR-----------------KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLN 376
R KK+ + ++ + + + + D + + Y+ ++ L
Sbjct: 713 ANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 772
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
+++ GYVPD R+ LHD+D+E K L HSE+LA+AYG+++T P P+RI KNLR CG
Sbjct: 773 QRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACG 832
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH+A +S I+ E+IVRD+ RFHHF++G CSC YW
Sbjct: 833 DCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +CG + S G VH ++ S F +V + N L+ MYG+C AR+VFD++R
Sbjct: 148 FPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMR 207
Query: 191 KR---NLSSWHLMISGYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVK 246
+R +L SW+ +++ Y G + +FE+M + G PD + + V ACAS A
Sbjct: 208 ERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWS 267
Query: 247 EGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
G + Y + G+ + A++ + G + EA + ERM + V W A
Sbjct: 268 RG-----KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS-WNA 321
Query: 303 L-RNFAQI 309
+ ++QI
Sbjct: 322 MVTGYSQI 329
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 90 RGNAQLESLDVNLLSLCKEG---KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEM 146
RG L S + + + + G + + E M +D ++L +C ++ +
Sbjct: 209 RGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR 268
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK+VH S +DV + N +++MY KC A KVF++++ +++ SW+ M++GY+
Sbjct: 269 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQ 328
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
G+ D L LFE++R+ + T+ V A A E F M G P +
Sbjct: 329 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL-CGSEPNVV 387
Query: 267 HYIAIIKVLGSAGHLIEAEE 286
++++ SAG L+ +E
Sbjct: 388 TLVSLLSGCASAGTLLHGKE 407
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN---------NKLIEMYGKCCNTRLAR 183
SLL C + ++ GK H ++ +++ N N LI+MY KC + + AR
Sbjct: 391 SLLSGCASAGTLLHGKETH--CHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAAR 448
Query: 184 KVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH--PDKETFLVVFAAC 239
+FD + + R++ +W ++I G A +G+ + L LF QM + P+ T AC
Sbjct: 449 AMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC 508
Query: 240 ASAEAVKEG 248
A A++ G
Sbjct: 509 ARLGALRFG 517
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 214/397 (53%), Gaps = 30/397 (7%)
Query: 107 KEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++G EA+E Q + S+L C L S++ G++VH L F DV
Sbjct: 308 RKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVY 367
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + L+ MY KC A+ VFD+ +++ W+ +ISGYA++G G + L +F +M +G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSG 427
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+K T + + AC+ ++EG FE M++ + + P +EHY + +LG AG + +A
Sbjct: 428 TMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKA 487
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPP 340
E + M +P VW AL + H ++L + A + L +++P A ++ I
Sbjct: 488 MELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASR 547
Query: 341 RKKQSATNM---LEEKNRVSDYRSTD----------LYRGEYEK----------MKGLNG 377
K M + KN VS + RG ++ +G
Sbjct: 548 SKWGDVAEMRKNMRTKN-VSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDG 606
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+REAGY PD +VLHD+DEE K +L HSERLA+AYGL+ P +P+R++KNLR+CGD
Sbjct: 607 LLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGD 666
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDY 474
CH AIK++SK+ RE+I+RD RFHHF +G+CSC DY
Sbjct: 667 CHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 120/265 (45%), Gaps = 42/265 (15%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL---------- 154
LC+EG+V EA E D +++++ G K +++ +++ E++
Sbjct: 182 LCREGRVDEAREIF--DEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTS 239
Query: 155 -----RTSAFVKDVE------------LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
S ++D E N +I G+ AR+VFDQ+ R+ ++W
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATW 299
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMK 256
MI Y G + L LF QM++ G P + + + + CA+ +++ G ++ +++
Sbjct: 300 RGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 257 NDY-GIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ G V Y+A ++ + G L++A+ +R P + + +W ++ + HG
Sbjct: 360 CQFDGDV-----YVASVLMTMYVKCGELVKAKLVFDRFPSKDII-MWNSIISGYASHG-- 411
Query: 314 ELEDRAEELLGDLDPSKAIVDKIPL 338
L + A ++ ++ S + +K+ L
Sbjct: 412 -LGEEALKVFHEMPLSGTMPNKVTL 435
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
ARK FD LR + + SW+ ++SGY ANG + +F++M P + ++ + +
Sbjct: 36 ARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEM----PERNIVSWNGLVSGYIK 91
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
++E FEIM + + A++K G ++EAE RMP
Sbjct: 92 NRMIEEARNVFEIMPER-----NVVSWTAMVKGYVQEGMVVEAELLFWRMP 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 161 KDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
KDV + +I G C R+ AR++FD++R+RN+ +W MI+GY N + LFE
Sbjct: 170 KDVVASTNMIG--GLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFE 227
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M P + ++ + + +++ +FE+M I A+I LG
Sbjct: 228 VM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN-----AMIVALGEV 278
Query: 279 GHLIEAEEFVERM 291
G +++A ++M
Sbjct: 279 GEIVKARRVFDQM 291
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 198/367 (53%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L +S L ++ +G ++H S +V + N LI MY K + A+ VF + N
Sbjct: 331 LFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCN 390
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W+ +I+G++ +G G + L +F+ M TG P+ TF+ V ACA + V EGF YF
Sbjct: 391 IITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFN 450
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ + IVPG+EHY I+ +L +G L EAE F+ V W L N +H
Sbjct: 451 HLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHY 510
Query: 314 ELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNMLEE 352
+ + E L L+P + ++ + R KK+ + LE
Sbjct: 511 DKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEI 570
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+N + S D+ E YE +K L ++R GYVPD VLHDI++E K L YHS
Sbjct: 571 RNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHS 630
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+AYGL+ TP P+ +IKNLR+C DCH AIK++SK+ R ++VRD RFHHF++G
Sbjct: 631 EKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGC 690
Query: 469 CSCGDYW 475
CSCGDYW
Sbjct: 691 CSCGDYW 697
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++ C +LK I +GK+VH + S DV + + +I+MYGKC N R FD+L+
Sbjct: 227 YVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQ 286
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ SW +I+ Y N + L LF +M P++ T V+F + A A+ G
Sbjct: 287 SRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLG 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 134 LLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELN--NKLIEMYGKCCNTRLARKVFDQLR 190
LL + K+++ G+ +H L T+ +D ++N N LI +Y KC +ARK+FD +
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACAS-------- 241
+RN+ SW +++GY NG + LF++M K P++ ++C S
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGKQ 144
Query: 242 --AEAVKEGFLYFEIMKN 257
A+K G + + +KN
Sbjct: 145 CHGYALKSGLEFHQYVKN 162
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ + SC + +E GK+ H S + N LI++Y KC + A ++ +
Sbjct: 126 VIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTV 184
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
++ ++L+++G + A+ + + + + G + T++ +F CAS + + G
Sbjct: 185 PGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGK 244
Query: 249 FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ +++K+D + YI +II + G G+++ F +R+ V W ++
Sbjct: 245 QVHAQMLKSDI----DCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVS-WTSI 296
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 200/376 (53%), Gaps = 33/376 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHEL----LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F +L +C L ++++GK VH LR S+ + L LI+MY KC A +V
Sbjct: 366 TFLGILHACACLGALDLGKWVHAYIDKNLRNSS---NASLWTSLIDMYAKCGCIEAAERV 422
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACASAEA 244
F + RNL+SW+ M+SG+A +G L LF +M G PD TF+ V +AC A
Sbjct: 423 FRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGL 482
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
V G YF M DYGI P ++HY +I +L A EAE ++ M EP +W +L
Sbjct: 483 VDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLL 542
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKK 343
+ + HG VE + E L L+P A I ++ KK
Sbjct: 543 SACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKK 602
Query: 344 QSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEA 399
+E V ++ D + E Y+ + ++ + E G+VP+T VL+D+DEE
Sbjct: 603 VPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEW 662
Query: 400 KEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 459
KE AL HSE+LAI++GLI T P +RI+KNLR+CG+CH+A K++SKI RE+I RD
Sbjct: 663 KEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRN 722
Query: 460 RFHHFRDGKCSCGDYW 475
RFHHF+DG CSC D W
Sbjct: 723 RFHHFKDGFCSCNDCW 738
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 6/222 (2%)
Query: 107 KEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EAI Y Q+A+ +L +CG+ +S E+GK + +R + F +++
Sbjct: 240 QSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQ 299
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L N LI+MY KC T +AR++FD + ++++ SW+ MI GY+ + L LFE M ++
Sbjct: 300 LTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSN 359
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TFL + ACA A+ G + + + ++I + G IEA
Sbjct: 360 VKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG-CIEA 418
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
E V R + W A+ + +HG E RA L ++
Sbjct: 419 AERVFRSMHSRNLASWNAMLSGFAMHGHAE---RALALFSEM 457
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD++ +++ SW+ MISGY +G+ + ++ F +M++ P+K T +VV +AC
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGH 275
Query: 242 AEAVKEG 248
+ + G
Sbjct: 276 TRSGELG 282
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 37/263 (14%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD- 187
+ +LL+ C N+ + K++H L+ + V + +KLI + L A +F+
Sbjct: 31 YLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEE 87
Query: 188 --QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
Q K N+ W+ +I GY+ + L LF +M G P+ TF +F +C A+A
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 246 KEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
EG L+ +K P + + ++I + S G + A R+ F+ + + +A+
Sbjct: 148 HEGKQLHAHALKLALHFNPHV--HTSVIHMYASVGEMDFA-----RLVFDKS-SLRDAVS 199
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDL 364
A I G V G LD ++ + D+IP+ +A +S Y +
Sbjct: 200 FTALITGYVS--------QGCLDDARRLFDEIPVKDVVSWNAM--------ISGYVQS-- 241
Query: 365 YRGEYEKMKGLNGQMREAGYVPD 387
G +E+ +M+EA +P+
Sbjct: 242 --GRFEEAIVCFYEMQEANVLPN 262
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 205/373 (54%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLK-SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
FSS+L+ C S+ GK+ H S + +++ L+ MY K N A +VF +
Sbjct: 100 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 159
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+++L SW+ MISGYA +GQ L +F++M+K D TF+ VFAAC A V+EG
Sbjct: 160 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 219
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF+IM D I P EH ++ + AG L +A + +E MP +W + +
Sbjct: 220 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 279
Query: 309 IHGDVEL-------------EDRAEELL--------GDLDPSKAIVDKIPLPPRKKQSAT 347
+H EL ED A +L GD + + KK+
Sbjct: 280 VHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGY 339
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E KN+ + RS L Y K++ L+ ++++ GY PDT YVL DID+E KE
Sbjct: 340 SWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV 399
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLAIA+GLI+TP PL IIKNLR+CGDCH IK+++KI RE++VRD+ RFHH
Sbjct: 400 LAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHH 459
Query: 464 F-RDGKCSCGDYW 475
F DG CSCGD+W
Sbjct: 460 FSSDGVCSCGDFW 472
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH + + + + + L++ Y K A KVF + +++ +W M++GYA G+
Sbjct: 19 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 78
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+ +F ++ K G P++ TF + CA+ A
Sbjct: 79 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 113
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 32/374 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS L +C +L S+E+G +VH L + K V ++N LI+MY KC + ++A+ VF+++
Sbjct: 452 FSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEME 511
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++SW+ +ISGY+ +G G L +F+ M+ + P+ TFL V + C++A + +G
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQD 571
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
FE M D+GI P +EHY ++++ G +G L +A +E +P+EP+V +W A+ + +
Sbjct: 572 CFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQ 631
Query: 311 GDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNM 349
+ E R+ E + ++P +I + KK+ +
Sbjct: 632 YNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSW 691
Query: 350 LEEKNRV-------SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+E + V SD+ L G E LN + AGYVPD VL D+D+E K+K
Sbjct: 692 IEHQGDVHFFSVGSSDHPDMKLINGMLE---WLNMKATRAGYVPDRNAVLLDMDDEEKDK 748
Query: 403 ALQYHSERLAIAYGLISTP-PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L HSERLA+AYGL+ P R + I+KNLRIC DCH+A+K++S IV R+L++RD RF
Sbjct: 749 RLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRF 808
Query: 462 HHFRDGKCSCGDYW 475
HHF G CSC D+W
Sbjct: 809 HHFHAGVCSCDDHW 822
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 62 VKKQRNPSSNEQEPKTGTGHSQ------NTNDPLRGNAQLESLDVNLLSL-----CKEGK 110
V Q + E +P+ G G Q + +D + ++ DV S C+ G
Sbjct: 269 VHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 111 VREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
+A++ ++ SS+L+ C K +G+++H L+ F DV ++N
Sbjct: 329 CNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNA 388
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI++Y KC A K+F +L +N+ SW+ +I GY G+G L +F + +
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVT 448
Query: 229 KETFLVVFAACASAEAVKEG 248
+ TF ACAS +++ G
Sbjct: 449 EVTFSSALGACASLASMELG 468
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 13/185 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+S L +L E+ +H + + + + LI Y C + AR VF+ +
Sbjct: 148 VFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGI 207
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ W ++S Y NG D L L +M G P+ TF A ++ G
Sbjct: 208 LCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA-----SIGLGA 262
Query: 250 LYF------EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+F +I+K Y + P + + ++++ G + +A + MP V +
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 304 RNFAQ 308
F Q
Sbjct: 321 ARFCQ 325
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
+ + MG D Y ++L S G L + K VH + + + D + L+++
Sbjct: 233 QLLSRMGMDGFMPNNYTFDTALKASIG-LGAFHFAKSVHGQILKTCYELDPRVGVGLLQL 291
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
Y + + A KVF+++ K ++ W MI+ + NG + +F +MR+ P++ T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTL 351
Query: 233 LVVFAACA 240
+ CA
Sbjct: 352 SSILNGCA 359
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 214/387 (55%), Gaps = 26/387 (6%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
++ Y +D+ FS ++ C L S+E K+ H L F D+ N L+++Y
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLY 378
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
K A+ VFD + +N+ SW+ +I+GY +G+G + + +FE+M G P+ TFL
Sbjct: 379 SKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFL 438
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
V +AC+ + G+ FE M D+ I P HY +I++LG G L EA ++ PF
Sbjct: 439 AVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPF 498
Query: 294 EPTVEVWEALRNFAQIHGDVELEDRAEELL---------------------GDLDPSKAI 332
+PTV +W AL ++H + EL A E L G L+ + A+
Sbjct: 499 KPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAV 558
Query: 333 VDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT 388
+ + + A + +E K + + S D + Y+K+ L ++ + GYVP
Sbjct: 559 IQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQX 618
Query: 389 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKI 448
+++L D+DE+ +E+ L YHSE+LAIA+GLI+T PL+I+++ RICGDCH+AIK+++ +
Sbjct: 619 KFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALV 677
Query: 449 VGRELIVRDNKRFHHFRDGKCSCGDYW 475
RE++VRD RFHHF+DG CSCGDYW
Sbjct: 678 TRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLAR 183
+ AG +F +++ + L I G+++H + DV + LI+MY KC + A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC---A 240
VFDQ+ ++ W+ +I+GYA +G + L ++ +MR +G D TF ++ C A
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLA 347
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
S E K+ + ++++ +G+ I A++ + G + +A+ + MP + + W
Sbjct: 348 SLEHAKQA--HAGLVRHGFGL--DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVIS-W 402
Query: 301 EAL 303
AL
Sbjct: 403 NAL 405
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
E E + + + + + +L+ +C LKSI K+V + S D L N+++ M
Sbjct: 116 ELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLM 175
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ KC AR++FD++ ++N+ SW+ +I G G + LF M + F
Sbjct: 176 HVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMF 235
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ + A A + G L+ +K G+ + A+I + G + +A+ ++M
Sbjct: 236 VTMIRASAGLGLIFAGRQLHSCSLKT--GVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293
Query: 292 PFEPTVEVWEALRNFAQIHG 311
P E T W ++ +HG
Sbjct: 294 P-EKTTVGWNSIIAGYALHG 312
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 208/381 (54%), Gaps = 26/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+D+ + + S ++ C L S+E K+ H L F D+ N L++ Y K
Sbjct: 312 RDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRM 371
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR VF+++R +N+ SW+ +I+GY +GQG + + +FEQM + G P TFL V +AC
Sbjct: 372 EDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSAC 431
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + + G+ F MK D+ + P HY +I++LG L EA + PF+PT +
Sbjct: 432 SYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANM 491
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSK---------------------AIVDKIPL 338
W AL ++H ++EL A E L ++P K I+ +
Sbjct: 492 WAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKK 551
Query: 339 PPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHD 394
+ A + +E K + + D + Y+K+ L ++ + GY + +L D
Sbjct: 552 KGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPD 611
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+DEE +++ L+YHSE+LAIA+GLI+TP PL+I + R+CGDCH+AIK+++ + GRE++
Sbjct: 612 VDEE-EQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIV 670
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFHHFR+G CSCGDYW
Sbjct: 671 VRDASRFHHFRNGSCSCGDYW 691
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 39/347 (11%)
Query: 5 VSIQQHAANSMIISSNFNSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKK 64
+++ H + + ++ S+F +S S+ +S ++ LC P ++ ++ +K
Sbjct: 3 IALSPHKSQTSLLGSSFPGNLS------SLGCCFASKMRFLC---NPFSRICCSSSMDQK 53
Query: 65 QRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKE-------GKVREAIEY 117
+ PK N P+ + Q+ + LC + + REA+E
Sbjct: 54 LK--------PKPKKVEYMERNVPVLEDTQIRKTSPS--GLCSQIEKLVVCNRHREAMEL 103
Query: 118 MGQDASASAGYDV----FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
GY V + +L+ +C L+SI KRV + S F D+ + N+++ M+
Sbjct: 104 FEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMH 163
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
KC ARK+FD++ +++++SW M+ G G ++ LF M K TF
Sbjct: 164 VKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFA 223
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERM 291
+ A A V+ G +I G +H++ A+I + G + +A ++M
Sbjct: 224 TMIRASAGLGLVQVG---KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQM 280
Query: 292 PFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
P E T W ++ +HG E A L ++ S VD +
Sbjct: 281 P-EKTTVGWNSIIASYALHGYSE---EALSLYFEMRDSGTTVDHFTI 323
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++++ + L +++GK++H D ++ LI+MY KC + A VFDQ+
Sbjct: 221 TFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQM 280
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC---ASAEAVK 246
++ W+ +I+ YA +G + L L+ +MR +G D T +V C AS E K
Sbjct: 281 PEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAK 340
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + +++ +G I A++ G + +A RM + + W AL
Sbjct: 341 QA--HAALVR--HGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVIS-WNAL 392
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 202/372 (54%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L++C ++ ++E GK V E + D + ++ +YGKC AR++FD +
Sbjct: 371 FVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVC 430
Query: 191 KR-NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R ++ W+ MI+ YA GQ + L LF +M G PD +F+ + AC+ +G
Sbjct: 431 SRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGK 490
Query: 250 LYFEIMKNDY-GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF M +Y + I+H+ + +LG G L EAEEF+E++P +P W +L +
Sbjct: 491 SYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACR 550
Query: 309 IHGDVELEDRAEELLGDLDPSKAI-----------------VDKI----PLPPRKKQSAT 347
H D++ L L+P A V K+ KK+
Sbjct: 551 NHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGV 610
Query: 348 NMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + D+ + D R E++ L+ QM+E GYVPDT+ VLH +DE+ KE+
Sbjct: 611 STIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERL 670
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLAIA GLISTP PLR+ KNLR+C DCH A K++SKI GR+++VRD RFH
Sbjct: 671 LFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHL 730
Query: 464 FRDGKCSCGDYW 475
F+DGKCSC DYW
Sbjct: 731 FKDGKCSCQDYW 742
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ SLL +C + + + +G+ +H+ + K+V + N L+ MY KC + AR VFD++
Sbjct: 263 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 322
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM---RKTGP----HPDKETFLVVFAACASAE 243
+R++ SW +IS Y A+ LF+QM K G PD F+ + ACA
Sbjct: 323 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 382
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A+++G + E G+ A++ + G G + EA + + P V++W A+
Sbjct: 383 ALEQGKMVSE-QAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAM 441
Query: 304 ----RNFAQIHGDVELEDRAE 320
F Q H ++L R E
Sbjct: 442 IAVYAQFGQSHEALKLFWRME 462
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 89/158 (56%), Gaps = 15/158 (9%)
Query: 109 GKVREAIEY------MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
G V EA+ + +G A+ SA ++L +C + ++ G+ +H + S F +
Sbjct: 139 GNVWEALRHFRFMLLLGIKATKSA----MVTILSACSSPALVQDGRMIHSCIALSGFESE 194
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQM 220
+ + N ++ MYG+C ARKVFD + + R++ SW++M+S Y N +G D + L+++M
Sbjct: 195 LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM 254
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
+ PDK T++ + +AC+SAE V G + + + ND
Sbjct: 255 Q---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVND 289
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A+E M QD F + L SCG+ +S+ G R+H+++ S D +++N L+ MY
Sbjct: 45 ALERMRQDGVRPDAV-TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMY 103
Query: 174 GKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
KC + A++VF ++ R RN+ SW +M +A +G + L F M G K
Sbjct: 104 KKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAM 163
Query: 233 LVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFV 288
+ + +AC+S V++G + + + G E + A++ + G G + EA +
Sbjct: 164 VTILSACSSPALVQDGRMIHSCIA-----LSGFESELLVANAVMTMYGRCGAVEEARKVF 218
Query: 289 ERMPFEPTVEVWEALRN 305
+ M EALR+
Sbjct: 219 DAMD--------EALRD 227
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY C + A+ FD L +RNL SW +++ +A +GQ + L E+MR+ G PD T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 232 FLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
F+ +C E++++G ++ ++ + I P + + A++ + G L A+ +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAK 118
Query: 291 MPFEPTVEVWEALRNFAQIHGDV 313
M V W + +HG+V
Sbjct: 119 MERTRNVISWSIMAGAHALHGNV 141
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 218/400 (54%), Gaps = 36/400 (9%)
Query: 108 EGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
+G+V E + + Q + +++L C + ++ GK +H + S DV L
Sbjct: 255 QGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPL 314
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N L++MY KC KVFD++ ++L+SW+ M++G++ NGQ + L LF++M + G
Sbjct: 315 LNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGI 374
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ TF+ + + C+ + EG F + D+G+ P +EHY ++ +LG +G EA
Sbjct: 375 EPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEAL 434
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS---------------- 329
E +P P+ +W +L N +++G+V L + E L +++P+
Sbjct: 435 SVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAG 494
Query: 330 -----KAIVDKIPLPPRKKQSATNMLEEKNRV--------SDYRSTDLYRGEYEKMKG-L 375
K + + + L KK + + ++ K+++ SD+R + EY+K+ L
Sbjct: 495 MWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCS----AEYKKIWNEL 550
Query: 376 NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
+ ++ GYVP+T VLHDI+EE K + HSERLA + LI+T MP+RI KNLR+C
Sbjct: 551 SNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVC 610
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH+ +K +SK+ R +++RD RFHHF +G CSC DYW
Sbjct: 611 VDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQD----ASASAGYDVFSSLLDSCGNLKSIEMGKRVH-E 152
+ L SLCK G + +A+ + + S L +C + +S+E G+++H
Sbjct: 36 FNSTLKSLCKWGNLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLH 95
Query: 153 LLRT-SAFVKDVELNNKLIEMYGKCCNTRLARKVF--DQLRKRNLSSWHLMISGYAANGQ 209
LLR+ + +++ L KLI +Y C AR+VF D + W M GY+ NG
Sbjct: 96 LLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGF 155
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHY 268
+ L+L+ M P F + AC+ + G ++ +I+K+D G + +
Sbjct: 156 SHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNN 215
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ + G E + E MP + V W L
Sbjct: 216 -ALLGLYVEIGCFDEVLKVFEEMP-QRNVVSWNTL 248
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
G FS L +C +L + +G+ +H ++++ D +NN L+ +Y + KV
Sbjct: 174 GNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKV 233
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+++ +RN+ SW+ +I+G+A G+ + L F M++ G T + CA A+
Sbjct: 234 FEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTAL 293
Query: 246 KEG 248
G
Sbjct: 294 HSG 296
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 214/387 (55%), Gaps = 26/387 (6%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
++ Y +D+ FS ++ C L S+E K+ H L F D+ N L+++Y
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLY 378
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
K A+ VFD + +N+ SW+ +I+GY +G+G + + +FE+M G P+ TFL
Sbjct: 379 SKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFL 438
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
V +AC+ + G+ FE M D+ I P HY +I++LG G L EA ++ PF
Sbjct: 439 AVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPF 498
Query: 294 EPTVEVWEALRNFAQIHGDVELEDRAEELL---------------------GDLDPSKAI 332
+PTV +W AL ++H + EL A E L G L+ + A+
Sbjct: 499 KPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAV 558
Query: 333 VDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT 388
+ + + A + +E K + + S D + Y+K+ L ++ + GYVP
Sbjct: 559 IQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQD 618
Query: 389 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKI 448
+++L D+DE+ +E+ L YHSE+LAIA+GLI+T PL+I+++ RICGDCH+AIK+++ +
Sbjct: 619 KFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALV 677
Query: 449 VGRELIVRDNKRFHHFRDGKCSCGDYW 475
RE++VRD RFHHF+DG CSCGDYW
Sbjct: 678 TRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M QD S AG +F +++ + L I G+++H + DV + LI+MY KC
Sbjct: 223 MWQDFS-DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCG 281
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ A+ VFDQ+ ++ W+ +I+GYA +G + L ++ +MR +G D TF ++
Sbjct: 282 SIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIR 341
Query: 238 AC---ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
C AS E K+ + ++++ +G+ I A++ + G + +A+ + MP +
Sbjct: 342 ICARLASLEHAKQA--HAGLVRHGFGL--DIVANTALVDLYSKWGRIEDAKHVFDMMPHK 397
Query: 295 PTVEVWEAL 303
+ W AL
Sbjct: 398 NVIS-WNAL 405
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
E E + + + + + +L+ +C LKSI K+V + S D L N+++ M
Sbjct: 116 ELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLM 175
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ KC AR++FD++ ++N+ SW+ +I G G + LF M + F
Sbjct: 176 HVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMF 235
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ + A A + G L+ +K G+ + A+I + G + +A+ ++M
Sbjct: 236 VTMIRASAGLGLIFAGRQLHSCSLKT--GVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293
Query: 292 PFEPTVEVWEALRNFAQIHG 311
P E T W ++ +HG
Sbjct: 294 P-EKTTVGWNSIIAGYALHG 312
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 218/390 (55%), Gaps = 27/390 (6%)
Query: 113 EAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+A+ + + A A Y+VF+ S + + NL I+ GK+VH + + E+ N LI
Sbjct: 531 QALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALI 590
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+YGKC + A+ +F ++ RN SW+ +I+ + +G+G + L LF+QM++ G P+
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDV 650
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
TF+ V AAC+ V+EG YF+ M N YG+ P +HY ++ +LG AG L A FV+
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDE 710
Query: 291 MPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-----------SKAIVDKIP-- 337
MP +W L + ++H ++E+ + A + L +L+P + A+ K
Sbjct: 711 MPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANR 770
Query: 338 ------LPPR--KKQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYV 385
+ R +K+ + +E KN V + D L Y+ + LN ++ + GY
Sbjct: 771 DQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYK 830
Query: 386 PDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIM 445
+ + H+ ++E K+ HSE+LA+A+GL++ PP +PLR+IKNLR+C DCH+ +K
Sbjct: 831 QENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFT 890
Query: 446 SKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
S++ RE+++RD RFHHF G CSCGDYW
Sbjct: 891 SEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C IE+G+++H L + F D+ ++ LI+MY K ARK+ + L
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR++ SW MI+GY + + L F++M+ G PD +ACA +A+++G
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L +C K G+ +H + AF + + N LI +Y + +LA +VF +
Sbjct: 146 VLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDM 205
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +++ +ISG+A G G L +F++M+ +G PD T + AACAS +++G
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKG 264
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C ++ ++ GK++H L + D L+++Y KC + A +F+ +
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ W+LM+ Y A +F QM+ TG HP+K T+ + C ++ G
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELG 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S +C +K++ G ++H + S + D+ + N L+ +Y +C + A +F ++
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ +W+ +ISG+ + LM+F +M + G + TF+ +A A+ +K+G
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +K G E A+I + G G + +A+ M V W +
Sbjct: 570 VHGRAVKT--GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQ 626
Query: 310 HG 311
HG
Sbjct: 627 HG 628
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D + N LI++Y K AR+VF +L R+ SW M+SGYA G G + L+ QM
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
T P V +AC + +G ++ ++ K + + + A+I + G
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN--ALIALYLGFGS 194
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQI-HGDVELEDRAEELLGDLDPSKAIV 333
AE M F V + AQ HG+ L+ E L L P V
Sbjct: 195 FKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTV 248
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 203/369 (55%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L + G L S+ GK VH L F + + + L++MY C + A KVF+ ++ +
Sbjct: 572 SILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK 631
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W MI+ +G G + LF++M +TG PD +FL + AC+ ++ V EG Y
Sbjct: 632 DMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYL 691
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++M + Y + P EHY ++ +LG +G EA EF++ MP +P VW +L ++H +
Sbjct: 692 DMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKN 751
Query: 313 VELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNMLE 351
EL A L +L+P +K + +I +K A + +E
Sbjct: 752 HELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIE 811
Query: 352 EKNRVSDYRSTDLYRGEYE----KMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKALQY 406
N V + + D + E K+ + ++R E GY DTR VLHD+ EE K L
Sbjct: 812 IGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHR 871
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAI++GLI+T P MPLRI KNLR+CGDCH K++SK+ R+++VRD RFHHF
Sbjct: 872 HSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSG 931
Query: 467 GKCSCGDYW 475
G CSCGD+W
Sbjct: 932 GSCSCGDFW 940
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L++C L++I + K++H + + D+ + N++I++YG+C + K+F+ +
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETV 527
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE-- 247
++++ +W MI+ YA +G + L+LF +M+ T PD + + A ++ +
Sbjct: 528 EQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGK 587
Query: 248 ---GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
GFL + IV +++ + G L A + + + V +W A+
Sbjct: 588 EVHGFLIRRNFHMEEAIVS------SLVDMYSGCGSLSGALKVFNAVKCKDMV-LWTAMI 640
Query: 305 NFAQIHG 311
N +HG
Sbjct: 641 NATGMHG 647
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 101 NLLSLCKEGKVREAIEYM-GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+L LCKEG +R+A+ + Q S + + +LD K++ G +VH +
Sbjct: 30 SLKQLCKEGNLRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGS 89
Query: 160 VK--DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
++ D L KL+ MYGKC AR +FD + R + SW+ +I Y ++G + L ++
Sbjct: 90 LEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVY 149
Query: 218 EQMR---KTGPHPDKETFLVVFAA 238
MR +G PD T V A
Sbjct: 150 RAMRLSAASGVAPDGCTLASVLKA 173
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 14/237 (5%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EAIE++ + D SL + G+L + GK VH D +
Sbjct: 343 QNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQ 402
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MY KC + VFD++R ++ SW +I+ YA + + + L +F + +K G
Sbjct: 403 VGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEG 462
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA---IIKVLGSAGHL 281
D + AC+ E + + Y I G+ + II + G G +
Sbjct: 463 IKVDPMMIGSILEACSGLETI-----LLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEV 517
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+ + E + + + W ++ N + + L + A L ++ + D + L
Sbjct: 518 YHSLKMFETVE-QKDIVTWTSMIN---CYANSGLLNEALVLFAEMQSTDVQPDSVAL 570
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L C L + +G+ +H L S +++ N L+ MY KC A +VF ++ +++
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKD 330
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
SW+ M+S Y NG A+ + +M + G PD + + +A
Sbjct: 331 YISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSA 375
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
S C+ V A+ A G +S+L + G G VH L +
Sbjct: 141 SACEALGVYRAMRLSAASGVAPDGC-TLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ N LI MY KC A +VF+ + R+++SW+ MISG NG L LF M++
Sbjct: 200 FVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR 259
Query: 223 TGPHPDKETFLVVFAAC 239
+ T + V C
Sbjct: 260 AVLSMNSYTTVGVLQVC 276
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 216/394 (54%), Gaps = 27/394 (6%)
Query: 109 GKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ REA++ ++ Q +L +C +L+ ++ G+ VH + V L
Sbjct: 223 GRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLG 282
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC N A +VF +++RN+ +W I G A NG G + L LF M++ G
Sbjct: 283 TALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQ 342
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TF+ V C+ V+EG +F+ M+N YGI P +EHY ++ + G AG L EA
Sbjct: 343 PNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALN 402
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGD-----------VELEDR---AEELLGDL------ 326
F+ MP P V W AL + +++ + VELED+ A LL ++
Sbjct: 403 FINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKN 462
Query: 327 -DPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMRE 381
+ ++ + KK +++E V ++ D Y+ K++ ++ +R
Sbjct: 463 WESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRL 522
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
+GYV +T VL DI+EE KE AL HSE++AIA+GLIS +P+R++ NLRIC DCHN
Sbjct: 523 SGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNV 582
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SKI RE+IVRD RFHHF+DG+CSC DYW
Sbjct: 583 AKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 31/149 (20%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG---------------- 174
F+ L+ +C L++ G VH + F D + L+ MY
Sbjct: 115 FTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAV 174
Query: 175 ---------------KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
KC + ARK+FD++ +R+ +W+ MI+GYA G+ + L +F
Sbjct: 175 EPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHL 234
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M+ G ++ + ++V +AC + + G
Sbjct: 235 MQMEGVKLNEVSMVLVLSACTHLQVLDHG 263
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 202/363 (55%), Gaps = 25/363 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++++GK +H +R + + L N L +MY KC A+ VF ++ +R
Sbjct: 296 SVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER 355
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW ++I G A G + F +M + G P+ +F+ + AC A V +G YF
Sbjct: 356 DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYF 415
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++M YGI P IEHY ++ +L AG L +AE + MP +P V VW AL +I+ D
Sbjct: 416 DMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKD 475
Query: 313 VELEDRAE----EL-----------------LGDLDPSKAIVDKIPLPPRKKQSATNMLE 351
E +R EL +G LD + + ++ K + +E
Sbjct: 476 AERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIE 535
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N V ++ D + Y ++ L +M+ AGY P T V+H+IDEE KE AL H
Sbjct: 536 INNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTH 595
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLI+T +RI+KNLR+C DCH+AIKI+SKIV RE++VRD RFHHF+DG
Sbjct: 596 SEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDG 655
Query: 468 KCS 470
KCS
Sbjct: 656 KCS 658
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK----CCNTRL---- 181
F+S+L +C L + G++VH + ++ + N L+++Y K C +L
Sbjct: 129 TFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM 188
Query: 182 -----------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
AR VFD + ++NL SW MISGYA G + LFE
Sbjct: 189 VVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFE 248
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M P + ++ + A A E + F M+++ G+ P + + ++ VL +
Sbjct: 249 NM----PMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAP---NDVTLVSVLSAC 301
Query: 279 GHL--IEAEEFVERMPFEPTVEV 299
HL ++ +++ R +EV
Sbjct: 302 AHLGALDLGKWIHRFIRRNKIEV 324
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 203/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S++ +C +L +++ GK VH +R + +V L L++MY KC A +VF+ +
Sbjct: 438 ILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM 497
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ +SSW+ +I G A NG L +F +M+ G P++ TF+ V AC V EG
Sbjct: 498 EEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGR 557
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M +GI P ++HY ++ +LG AG L EAE+ +E MP P V W AL +
Sbjct: 558 CHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKK 617
Query: 310 HGDVELEDRAEELLGDLDP--------------SKA-IVDKIPLPPRKKQSAT------N 348
HGD E+ +R L +L P SK D + + KQ +
Sbjct: 618 HGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCS 677
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKAL 404
++E V ++ + D K++G+ +M + GY PDT V DIDEE KE L
Sbjct: 678 LIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTL 737
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GL++ P P+RI+KNLRIC DCH A K++SK RE++VRD RFH+F
Sbjct: 738 FRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYF 797
Query: 465 RDGKCSCGDYW 475
++G CSC DYW
Sbjct: 798 KEGACSCMDYW 808
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 38/241 (15%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG--------------- 174
V S+L +C +L ++ GK +H L+ V L N LI MY
Sbjct: 306 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGS 365
Query: 175 ----------------KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
KC + AR +FD + ++++ SW +ISGYA + ++ L LF
Sbjct: 366 HNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFH 425
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M+ PD+ + V +AC A+ +G +++ I KN G+ + ++ +
Sbjct: 426 EMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKN--GLKVNVILGTTLLDMYMK 483
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
G + A E M E V W AL ++G VE R+ ++ ++ + I ++I
Sbjct: 484 CGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE---RSLDMFSEMKNNGVIPNEIT 539
Query: 338 L 338
Sbjct: 540 F 540
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+++ +N +I + GK A K+F+++ ++++ SW +ISGY NG + L++F +M
Sbjct: 236 RNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM 295
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV--PGIEHYI----AIIKV 274
G D+ + V +ACA VK G K +G+V GIE Y+ A+I +
Sbjct: 296 NANGMRLDEVVVVSVLSACAHLSIVKTG-------KMIHGLVIRMGIESYVNLQNALIHM 348
Query: 275 LGSAGHLIEAEEF 287
+G +++A++
Sbjct: 349 YSGSGEIMDAQKL 361
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
+ + L +C NLK R+ + + F+ D ++L++ L + ++FD
Sbjct: 43 ILETHLHNCHNLKQF---NRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFD 99
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ N W+ M+ Y + L+L++ M K PD T+ +V ACA
Sbjct: 100 RIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA 152
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 223/416 (53%), Gaps = 38/416 (9%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIE-YMGQDASASAGYDV-FSSLLDSCGNLKSIEMGK 148
G L S +V + K EA+E Y G +A V +S+L +CG+ ++ +GK
Sbjct: 271 GKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGK 330
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H + + ++ L N LI+MY KC AR VF+ ++ R++ SW MIS Y +G
Sbjct: 331 KIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSG 390
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+G D + LF +M+ +G PD F+ AAC+ A ++EG F++M + Y I P +EH
Sbjct: 391 RGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 450
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
++ +LG AG + EA +F++ MP EP VW AL ++H + ++ A + L L P
Sbjct: 451 ACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAP 510
Query: 329 SKA----IVDKIPLPPRKKQSATNMLE----------------EKNRV---------SDY 359
++ ++ I + + TN+ E NR+ S
Sbjct: 511 EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHP 570
Query: 360 RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIS 419
+S ++YR ++ L +M+E GYVPD+ LHD++EE KE L HSE+LAI + L++
Sbjct: 571 QSAEIYR----ELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMN 626
Query: 420 TP---PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCG 472
T +RI KNLRICGDCH A K++S+I RE+I+RD RFH FR G CSC
Sbjct: 627 TEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 28/311 (9%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLR 155
++V + S G RE I+ G S D F +L +C +I +GK++H
Sbjct: 109 INVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSAT 168
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ + N L+ MYGKC AR V D++ +R++ SW+ +++GYA N + D L
Sbjct: 169 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALE 228
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
+ +M D T + A ++ E +Y + M G + + +I V
Sbjct: 229 VCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMG-KKSLVSWNVMIGVY 285
Query: 276 GSAGHLIEAEEFVERMP---FEP-TVEV---------WEALRNFAQIHGDVELEDRAEEL 322
+EA E M FEP V + AL +IHG +E ++L
Sbjct: 286 MKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE----RKKL 341
Query: 323 LGDLDPSKAIVD---KIPLPPRKKQSATNMLEEKNRVSDYRSTDLY--RGEYEKMKGLNG 377
+ +L A++D K R + NM + ++ VS Y G L
Sbjct: 342 IPNLLLENALIDMYAKCGCLDRARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFS 400
Query: 378 QMREAGYVPDT 388
+M+++G VPD+
Sbjct: 401 KMQDSGLVPDS 411
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LD+ +LK++ + VH + + + L KL+ Y + ARKVFD++
Sbjct: 45 MLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEI 101
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
+RN+ ++MI Y NG +G+ +F M PD TF V AC+ +
Sbjct: 102 PERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCS 154
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 203/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ +L +C G++VH + S + L+ MY KC + A +VF+ +
Sbjct: 271 TYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAM 330
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K +L SW +ISGYA NGQ + L F+ ++G PD TF+ V +ACA A V +G
Sbjct: 331 AKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGL 390
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F +K Y I +HY +I +L +G AE+ + M +P +W +L +I
Sbjct: 391 EIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRI 450
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATN 348
H +V L RA E L +++P S + D++ R K A++
Sbjct: 451 HKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASS 510
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E RV + D + Y +K L +M E GYV D +VLHD+++E KE+ +
Sbjct: 511 WIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDI 570
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSERLA+A+G+I+TP P+++ KNLRICGDCH AIK++S+IV R++IVRD+ RFHHF
Sbjct: 571 GYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHF 630
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 631 KDGICSCRDYW 641
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D L + L +MY KC AR+VFD++ R+ SW M+ Y G+G +G LF M
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 222 KT-GPHPDKETFLVVFAACA 240
+T G P++ T+ V ACA
Sbjct: 261 RTRGVRPNEFTYAGVLRACA 280
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 206/370 (55%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +I++G+ +H + + + L LI+MY KC + A +VF+ +
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+LSSW+ MI G+A +G+ LF +MR PD TF+ + +AC+ + + G
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ 425
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ M DY + P +EHY +I +LG +G EAEE + MP EP +W +L + H
Sbjct: 426 IFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKH 485
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPP-----------------RKKQSATNM 349
G++EL + + L ++P S ++ I KK +
Sbjct: 486 GNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSS 545
Query: 350 LEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D R Y ++ ++ Q+ EAG+ PDT VL +++EE KE AL+
Sbjct: 546 IEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALR 605
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE++ RD RFHHFR
Sbjct: 606 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFR 665
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 666 DGVCSCCDYW 675
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 8/222 (3%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S + + + G+ EA+E + + D S++ +C SIE+G++VH +
Sbjct: 163 SWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWV 222
Query: 155 RTS----AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
F +++ N LI++Y KC + A +F+ L +++ SW+ +I GY
Sbjct: 223 DDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLY 282
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI 269
+ L+LF++M ++G P+ T L V ACA A+ G +++ I K G+
Sbjct: 283 KEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRT 342
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++I + G + A + M + ++ W A+ +HG
Sbjct: 343 SLIDMYAKCGDIEAAHQVFNSMLYR-SLSSWNAMIFGFAMHG 383
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 31/149 (20%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK--------------- 175
F LL SC K+ E G+++H + D ++ LI MY +
Sbjct: 67 FPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASS 126
Query: 176 -----CCNT-----------RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
C R ARKVFD++ +R++ SW+ MI+GY NG+ + L LF++
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M +T PD+ T + V +ACA + +++ G
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELG 215
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF+ +++ NL W+ M+ G+A++ L ++ +M G P+ +F + +CA
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 242 AEAVKEG 248
++A +EG
Sbjct: 77 SKAFEEG 83
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 204/372 (54%), Gaps = 33/372 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++++G+ +H+ +R V+++ L++MY KC + A VF + R
Sbjct: 239 SVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESR 298
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W +MI YA +G G + + LFE+M+K G PD TFL + AC+ + V EG YF
Sbjct: 299 DRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYF 358
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ MK D+GIVPGI+HY + +L +G L A +F++ +P PT +W L + HGD
Sbjct: 359 DDMK-DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGD 417
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRST---------- 362
VEL R E + +LD S D + + T EE NRV S
Sbjct: 418 VELGKRVFERILELDDSHG-GDYVIF--SNLCANTGYWEEMNRVRKLMSDKGVVKVPGCS 474
Query: 363 ---------DLYRGEYEKMKGLNG---------QMREAGYVPDTRYVLH-DIDEEAKEKA 403
+ + G+ K Q++ GY+PDT +V H ++ EE K +
Sbjct: 475 SIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAIS 534
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L+YHSE+LAIA+GL++T P LR++KNLR+C DCH+ K +S + R +I+RD RFHH
Sbjct: 535 LKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHH 594
Query: 464 FRDGKCSCGDYW 475
F G CSCGDYW
Sbjct: 595 FERGICSCGDYW 606
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C ++ E G++ H + + LI MY +C + R AR F +
Sbjct: 136 FVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRAD 195
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ S++ MI+ + + + L+LF +M+ G +P T + V +ACA A++ G
Sbjct: 196 GDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRW 255
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ ++ G+ ++ A++ + G L +A + M
Sbjct: 256 LHDYVRK-LGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGM 295
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 205/372 (55%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLK-SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L+ C S+ GK+ H S + +++ L+ MY K N A +VF +
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+++L SW+ MISGYA +GQ L +F++M+K D TF+ VFAAC A V+EG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+IM D I P EH ++ + AG L +A + +E MP +W + ++
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 310 HGDVEL-------------EDRAEELL--------GDLDPSKAIVDKIPLPPRKKQSATN 348
H EL ED A +L GD + + KK+ +
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN+ + RS L Y K++ L+ ++++ GY PDT YVL DID+E KE L
Sbjct: 737 WIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVL 796
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+GLI+TP PL IIKNLR+CGDCH IK+++KI RE++VRD+ RFHHF
Sbjct: 797 AQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHF 856
Query: 465 -RDGKCSCGDYW 475
DG CSCGD+W
Sbjct: 857 SSDGVCSCGDFW 868
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 102 LLSLCKEGKVREA------IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLR 155
L ++G+ +EA I +G + S +FSS+L L G+++H
Sbjct: 65 LFGFSRDGRTQEAKRLFLNIHRLGMEMDCS----IFSSVLKVSATLCDELFGRQLHCQCI 120
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
F+ DV + L++ Y K N + RKVFD++++RN+ +W +ISGYA N + L
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 216 LFEQMRKTGPHPDKETFLVVFAACA 240
LF +M+ G P+ TF A
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLA 205
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G +VH ++ + K + ++N LI +Y KC N R AR +FD+ +++ +W+ MISGYAA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS-----------AEAVKEGFLYFEIM 255
NG + L +F MR + +F V CA+ VK GFL+ + +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 256 KN----DYGIVPGIEHYIAIIKVLGSAGHLI 282
+ Y + + + K +G G+++
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S++ C NLK + +++H + F+ D + L+ Y KC A ++F ++
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
N+ SW MISG+ N + + LF +M++ G P++ T+ V+ A
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH + + + + + L++ Y K A KVF + +++ +W M++GYA G+
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+ +F ++ K G P++ TF + CA+ A
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 206/386 (53%), Gaps = 28/386 (7%)
Query: 118 MGQDAS-ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC 176
M QD S + S+L +C ++E G+R+H+ + + L MY KC
Sbjct: 304 MLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKC 363
Query: 177 CNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
+ AR FD + + +NL +W+ MI+ YA++G G + + +FE M + G PD TF+
Sbjct: 364 YSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMG 423
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
+ + C+ + + G +F M + + P +EHY ++ +LG AG L+EA+E + +MP +
Sbjct: 424 LLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQ 483
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS---------------------KAIV 333
VW AL + H ++E+ + A L L+P K +
Sbjct: 484 AGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLR 543
Query: 334 DKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTR 389
+ KK + +E + + D + Y+ ++ L +++ AGY+PDT
Sbjct: 544 ALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTS 603
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
+VLHDI EE KE L HSE+LAIA+GL++T P + LR+ KNLRICGDCH A K +SKI
Sbjct: 604 FVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIY 663
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
RE+IVRD RFH F+DG CSCGDYW
Sbjct: 664 EREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 33/148 (22%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL---- 189
+L SC +L + MG+ VH D + LI+MY KC ARK+FD++
Sbjct: 187 VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRD 246
Query: 190 ---------------------------RKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
RN+ SW MISGY NG L LF++M +
Sbjct: 247 MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQ 306
Query: 223 TGPH--PDKETFLVVFAACASAEAVKEG 248
G P+ T + V ACA + A++ G
Sbjct: 307 DGSEMKPNWVTIVSVLPACAQSAALERG 334
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 220/404 (54%), Gaps = 32/404 (7%)
Query: 102 LLSLC-KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSA 158
LLS C + GK EA + + + D+ + SL+ +C +L +++ GK H +
Sbjct: 379 LLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRG 438
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+ + N LI+MY KC L+R+VFD++ R++ SW+ MI+GY +G G + LF
Sbjct: 439 LALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFL 498
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M+ G PD TF+ + AAC+ + V EG +F+ M + YGI+P +EHYI ++ +L
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 558
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------- 331
G L EA +F++ MP + V VW AL +IH +++L + ++ L P
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618
Query: 332 ----------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD----LYRGEYEK 371
I+ K+ KK + +E + + D R Y +
Sbjct: 619 NIFSAAGRFDEAAEVRIIQKV--KGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHE 676
Query: 372 MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKN 431
+ + +++ GY DT +VL D++EE KEKAL YHSE+LAIA+G++S + + KN
Sbjct: 677 LDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKN 736
Query: 432 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LR+CGDCH AIK M+ + R +IVRD RFHHF++G+CSCG++W
Sbjct: 737 LRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S L C +L + MG ++H L+ S D+ +N L+ MY K A FD++
Sbjct: 311 ASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV 370
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ S+ ++SG NG+ + ++F++M+ PD T + + AC+ A++ G
Sbjct: 371 KDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG--- 427
Query: 252 FEIMKNDYG--IVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
K +G I+ G+ +I I + G + + + ++MP V W +
Sbjct: 428 ----KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVS-WNTMIA 482
Query: 306 FAQIHG 311
IHG
Sbjct: 483 GYGIHG 488
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +L +C L + G+ +H + D+ ++ LI++Y +C AR VF ++
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161
Query: 190 RKRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ M++GYA +G + L + G P+ T + + A A+ +G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
Query: 249 F------LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
L + +N+ ++ G A++ + L+ A MP V W A
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIG----TALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSA 276
Query: 303 L 303
L
Sbjct: 277 L 277
>gi|302780141|ref|XP_002971845.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
gi|300160144|gb|EFJ26762.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
Length = 383
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 207/372 (55%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQ 188
++SLLD+C NL S+ G+++H + ++ DV L ++ MY KC AR +FD+
Sbjct: 12 TYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDR 71
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ ++N+ +W +I YA NG + L LF +M + G + TF+ V AC+ A V +
Sbjct: 72 IGEKNIVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVSVLYACSHAGLVDDA 131
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ YF M ++ + P HY I+ +LG AG L +AEE ++RM + +W L +
Sbjct: 132 YYYFTTMMSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQRMKAPHSGVLWTTLLGACK 191
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
HGD+ L +RA E + +LDP A + ++ KK +
Sbjct: 192 THGDMMLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAASVRKRMDNMKVKKPAGK 251
Query: 348 NMLEEKNRVSDYRSTDLYR---GEYE-KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + ++ ++ + D GE ++K L ++EAGY D LH+ +EE KE
Sbjct: 252 SWVEVRGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKSATLHNAEEEEKEGL 311
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L YHSE+LAI GL+ +P P++++KNLR+C DCH A K +SK+V R++++RD K+FHH
Sbjct: 312 LYYHSEKLAIVMGLLHSPRGEPVQVVKNLRVCSDCHAAAKFISKVVDRQIVLRDTKQFHH 371
Query: 464 FRDGKCSCGDYW 475
F G+CSCGDYW
Sbjct: 372 FEHGRCSCGDYW 383
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 220/404 (54%), Gaps = 32/404 (7%)
Query: 102 LLSLC-KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSA 158
LLS C + GK EA + + + D+ + SL+ +C +L +++ GK H +
Sbjct: 379 LLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRG 438
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+ + N LI+MY KC L+R+VFD++ R++ SW+ MI+GY +G G + LF
Sbjct: 439 LALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFL 498
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
M+ G PD TF+ + AAC+ + V EG +F+ M + YGI+P +EHYI ++ +L
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 558
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------- 331
G L EA +F++ MP + V VW AL +IH +++L + ++ L P
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618
Query: 332 ----------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTD----LYRGEYEK 371
I+ K+ KK + +E + + D R Y +
Sbjct: 619 NIFSAAGRFDEAAEVRIIQKV--KGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHE 676
Query: 372 MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKN 431
+ + +++ GY DT +VL D++EE KEKAL YHSE+LAIA+G++S + + KN
Sbjct: 677 LDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKN 736
Query: 432 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LR+CGDCH AIK M+ + R +IVRD RFHHF++G+CSCG++W
Sbjct: 737 LRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S L C +L + MG ++H L+ S D+ +N L+ MY K A FD++
Sbjct: 311 ASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV 370
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ S+ ++SG NG+ + ++F++M+ PD T + + AC+ A++ G
Sbjct: 371 KDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG--- 427
Query: 252 FEIMKNDYG--IVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
K +G I+ G+ +I I + G + + + ++MP V W +
Sbjct: 428 ----KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVS-WNTMIA 482
Query: 306 FAQIHG 311
IHG
Sbjct: 483 GYGIHG 488
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +L +C L + G+ +H + D+ ++ LI++Y +C AR VF ++
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161
Query: 190 RKRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ M++GYA +G + L + G P+ T + + A A+ +G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
Query: 249 F------LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
L + +N+ ++ G A++ + L+ A MP V W A
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIG----TALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSA 276
Query: 303 L 303
L
Sbjct: 277 L 277
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 214/383 (55%), Gaps = 47/383 (12%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKC------CNTRLARKV 185
S++D C +L ++E+G+ + + L + V +DV + + ++ M KC C AR
Sbjct: 541 SVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMP 600
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEA 244
D +++L +W+ MI+ YA +G G L LF M+ ++ PD TF+ V + C+ A
Sbjct: 601 DD---RKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGL 657
Query: 245 VKEGFLYFEIMKNDYGIVPG-IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
V++G F + + GI +EHY ++ VLG G+L EAE+F+ +MP VW +L
Sbjct: 658 VEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 717
Query: 304 RNFAQIHGDVELEDRAEELLGDL----------------------DPSKAIVDKIPLPPR 341
+GD+E +RA +L D + D +
Sbjct: 718 LGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVK 777
Query: 342 KKQSATNMLEEKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLH 393
K+ + + KNRV ++ +S ++Y E E++KGL +REAGYVPDTR VLH
Sbjct: 778 KRAPGKSSIVVKNRVHEFFARDRSHPQSDEIY-AELERLKGL---IREAGYVPDTRLVLH 833
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
D++EE KE+ L YHSE+LAIA+GLIS P R +R+IKNLR+C DCH A K ++++ RE+
Sbjct: 834 DVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREI 893
Query: 454 IVRDNKRFHHF-RDGKCSCGDYW 475
VRD RFHHF +DG+CSCGDYW
Sbjct: 894 AVRDCNRFHHFGKDGECSCGDYW 916
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L SCG+ S+ + + +H + F+ DV + L+ MYG+C + + VF+ +
Sbjct: 236 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 295
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF-AACASA------E 243
RN SW+ MI+ +A G + ++ +M++ G P+K TF+ AAC+S+
Sbjct: 296 VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGES 355
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A G++ ++ D ++ G A++ + GS G + A + +P + V W A+
Sbjct: 356 AALHGWIACAGLEGD--VMVG----TALVTMYGSTGAIDRARAAFDAIPAKNIVS-WNAM 408
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKR--VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F + L + + S ++G+ +H + + DV + L+ MYG AR FD
Sbjct: 337 FVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDA 396
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +N+ SW+ M++ Y NG+ + + LF M++ P+K ++L V C +
Sbjct: 397 IPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARS- 455
Query: 249 FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEA 284
++ E++ N G+ E IA ++++ +G L EA
Sbjct: 456 -IHAEVVGN--GLFAQ-ESSIANGVVRMFARSGSLEEA 489
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH+ +R S +D+ + L++ YGKC A +VF +++ +L W+ I A N +
Sbjct: 153 VHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDE 212
Query: 210 GAD-GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
D L+L +M G P++ +F+ + ++C ++ + G + +
Sbjct: 213 RPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLA-RSIHARVEELGFLGDVVVA 271
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
A++ + G G + E+ E M V W A+ FAQ
Sbjct: 272 TALVTMYGRCGSVDESIAVFEAMAVRNHVS-WNAMIAAFAQ 311
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ + LL C + G+++H + ++ L N L++MY KC + A F
Sbjct: 25 ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSA 84
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMR---KTGPHPDKETFLVVFAACASAE 243
LR R +++W+ +I AA A L+ +M+ + P++ T + V A AS +
Sbjct: 85 LRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGD 139
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 3/198 (1%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLR 155
S + L + G+ REA+E S + S L G + + + +H E++
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVS-YLAVLGCCEDVSEARSIHAEVVG 462
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
F ++ + N ++ M+ + + A FD ++ SW+ ++ +A +
Sbjct: 463 NGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAIT 522
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
F M+ G PDK T + V CA ++ G + + + + A++ ++
Sbjct: 523 AFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMV 582
Query: 276 GSAGHLI-EAEEFVERMP 292
G + E E RMP
Sbjct: 583 AKCGSSVDECERLFARMP 600
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 217/398 (54%), Gaps = 29/398 (7%)
Query: 107 KEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
K GK EA+ E M + +S S+L +C +L ++E G+ +H +
Sbjct: 260 KNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSI 319
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + + L+ MYG+C + ++VFD++ R++ SW+ +IS Y +G G + +FE+M
Sbjct: 320 LPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLA 379
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
G P TF+ V AC+ V+EG FE M D+GI P +EHY ++ +LG A L
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLD 439
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----------- 331
EA + V+ M EP +VW +L +IHG+VEL +RA L L+P A
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYA 499
Query: 332 ---IVDKIPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNG 377
+ D++ + +K +E + ++ + S D + E++ L
Sbjct: 500 EAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAE 559
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
M+E GY+P T+ VL++++ E KE+ + HSE+LA+A+GLI+T P+RI KNLR+C D
Sbjct: 560 DMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCED 619
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CH K +SK + +E++VRD RFH F++G CSCGDYW
Sbjct: 620 CHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLCKEGK+++A+ + Q++S S + L+ CG+ S+ G RVH + + +D
Sbjct: 55 SLCKEGKLKQALRVLSQESSPSQ--QTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDP 112
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI MY + ARKVFD+ RKR + W+ + G G + L L+ +M +
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 224 GPHPDKETFLVVFAACASAEAVKE 247
G D+ T+ V AC ++E +
Sbjct: 173 GVESDRFTYTYVLKACVASECTAD 196
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H L + V + L++MY + A VF+ + RN+ SW MI+ YA
Sbjct: 201 GKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAK 260
Query: 207 NGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKEGFLY--FEIMKNDYGIV 262
NG+ + L F +M P+ T + V ACAS A+++G L + + + I+
Sbjct: 261 NGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSIL 320
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
P I A++ + G G L + +RM + V W +L + +HG
Sbjct: 321 PVIS---ALVTMYGRCGKLDVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 201/366 (54%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L + L +E GK VH +++ S + + L++MY KC +AR+VFD +R+R++
Sbjct: 286 LSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDV 345
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ MI G AA+G G D + LFE+ G P TF+ V C+ + V EG YF++
Sbjct: 346 FAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKL 405
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ Y I P +EHY ++ +LG AG + EA E +E M P +W + + + HG V+
Sbjct: 406 IVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVD 465
Query: 315 LEDRAEELLGDLDPSKA----IVDKIPLPPRK-----------------KQSATNMLEEK 353
L L +LDP+ + ++ I K K + +++E
Sbjct: 466 LGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEAH 525
Query: 354 NRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
+V + D Y + Y+ + +N ++ EAGYVPD VLHDI EE K A++ HSE
Sbjct: 526 GKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSE 585
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
RLAIAYG I P+RI+KNLR+CGDCH K+++ + RE+IVRD RFHH ++GKC
Sbjct: 586 RLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDGSRFHHMKEGKC 645
Query: 470 SCGDYW 475
SC DYW
Sbjct: 646 SCLDYW 651
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+DV N+++ Y + +AR+VFD++ R+ SW ++ GY + L +F
Sbjct: 210 VRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRN 269
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M + G P++ + +A A ++ G +++ G+ + A++ + G
Sbjct: 270 MVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRS-GMPVCMNVGAALVDMYAKCG 328
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG----DVELEDR 318
+ A E + M V W A+ HG VEL +R
Sbjct: 329 CVAVAREVFDGMR-RRDVFAWNAMICGLAAHGLGRDAVELFER 370
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGY 204
+G VH L + D+ + N L+ YG + R+VFD+L R R++ +W+ +++GY
Sbjct: 164 LGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGY 223
Query: 205 AANGQGADGLMLFEQM 220
G +F++M
Sbjct: 224 VRAGMMTVAREVFDEM 239
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 214/391 (54%), Gaps = 26/391 (6%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
K E M ++ + Y + S+L +C + +++ G R+H L + F ++ + L
Sbjct: 290 KALETFFCMLEEGARPNDYTIVSAL-SACAKIGALDAGLRIHNYLSGNGFKLNLVIGTAL 348
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++MY KC N A KVF + +++ L W +MI G+A +G L FE M+ TG PD
Sbjct: 349 VDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDS 408
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
FL V AC+ + V EG +F+ M+ Y I P ++HY ++ +LG AG L EA +F+
Sbjct: 409 VVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIR 468
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP---------SKAI-------- 332
MP P VW AL + H +VE+ + A + L L+P S A
Sbjct: 469 AMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDD 528
Query: 333 VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGY 384
+++ + R K + +E +++ + + D Y K+ ++ RE GY
Sbjct: 529 AERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGY 588
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
+ VLH+I+EE KE+AL YHSE+LA+A+G++ST P +RI+KNLR+C DCH+ +K
Sbjct: 589 TKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKY 648
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
SK+ RE+I+RD KRFHHF DG CSCGDYW
Sbjct: 649 ASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
KD N LI + K + A+++F ++ ++N+ SW M++G++ NG L F M
Sbjct: 239 KDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCM 298
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ G P+ T + +ACA A+ G + + G + A++ + G+
Sbjct: 299 LEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN-GFKLNLVIGTALVDMYAKCGN 357
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ AE+ E + +W + IHG
Sbjct: 358 IEHAEKVFHETK-EKGLLIWSVMIWGWAIHG 387
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 226/410 (55%), Gaps = 36/410 (8%)
Query: 100 VNLLSLCKEGKVREAIEYMGQ-------DASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
+N +C GK +EA++ + + S S++L +CG L ++E GK VH
Sbjct: 165 INGYVMC--GKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHS 222
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGA 211
+ D+ L LI+MY KC + A++VFD L K+++ ++ MI A G
Sbjct: 223 YIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTD 282
Query: 212 DGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA 270
+ +F +M + +P+ TF+ + AC + +G YF++M ++GI P I+HY
Sbjct: 283 ECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGC 342
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-- 328
++ + G +G + EAE F+ MP EP V +W +L + +++ GD++ + A + L +LDP
Sbjct: 343 MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMN 402
Query: 329 -------------------SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE- 368
K I ++ + KK + +E + V ++ D + E
Sbjct: 403 SGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQES 462
Query: 369 ---YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMP 425
Y ++ + ++REAGYV DT+ VL D++E+ KE AL YHSE+LAIA+ L+ T P P
Sbjct: 463 ERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTP 522
Query: 426 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+RIIKNLRICGDCH +K++SK+ RE++VRD RFHHF DG CSC D+W
Sbjct: 523 VRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN----- 178
S + F LL S N + +G+R H + KD + L+ MY C +
Sbjct: 57 VSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSAL 116
Query: 179 --------------------------TRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
ARK+FD++ +RN+ SW +I+GY G+ +
Sbjct: 117 RIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKE 176
Query: 213 GLMLFEQMRKTGPH-----PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
L LF +M+ P+ P+K T V +AC A+++G + + YG+ I
Sbjct: 177 ALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQG-KWVHSYIDKYGVEIDIVL 235
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
A+I + G L A+ + + + V+ + A+ ++G L D ++ ++
Sbjct: 236 GTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYG---LTDECFQVFSEMT 292
Query: 328 PSKAI 332
S I
Sbjct: 293 TSNNI 297
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 222/395 (56%), Gaps = 29/395 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G++REA+ D F+ +LL +C +L +++ G+ +H + D+ L
Sbjct: 351 GQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLG 410
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC A VF ++ KR++ +W MI+G A NG G L F QMR G
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQ 470
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ +++ V AC+ + + EG LYF+ M+ Y I P IEHY +I +LG +G L EA +
Sbjct: 471 PNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMD 530
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK----AIVDKIPLPPRK 342
V+ MP +P +W ++ + ++H ++L A E L L+P + + I + R+
Sbjct: 531 LVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQ 590
Query: 343 KQSATN--MLEEKNRV---SDYRSTDLYRGEYEK-----------------MKGLNGQMR 380
++A+ ML E+ +V + Y S + G+ K ++ ++ +++
Sbjct: 591 WENASKIRMLMEERQVKKTAGYSSITV-AGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 649
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GY P T + D+DEE KE+AL HSE+LAIA+GLI+ P +P+ I KNLR+C DCH+
Sbjct: 650 SLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHS 709
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK++S++ RE+IVRD RFHHFR+G CSC D+W
Sbjct: 710 AIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 32/148 (21%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC---------------- 176
++L +C LK +E+G+ +H L+ L LI+MY KC
Sbjct: 244 AVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRG 303
Query: 177 -------------C---NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
C + +AR +FD++ R++ +++ M++GY +GQ + L+LF M
Sbjct: 304 PRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSM 363
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ D T + + ACAS A+++G
Sbjct: 364 RRHDLRVDNFTVVNLLTACASLGALQQG 391
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 32/182 (17%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML-------- 216
++N LI MY + AR+ FD++ ++ +W ++ISG A G D +L
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRD 203
Query: 217 -----------------------FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
F+ M G PD+ T + V +ACA + ++ G
Sbjct: 204 VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELG-RSLH 262
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
++ + G+ +A+I + G A++ + + P + W A+ + HG V
Sbjct: 263 LLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHV 322
Query: 314 EL 315
++
Sbjct: 323 DV 324
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 221/406 (54%), Gaps = 27/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S +V + + G EAI Q ++ Y S+L + + ++E+GK +H
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ D L + L++MY KC + A +VF+ L KRN +W +I +A +G+ D +
Sbjct: 297 GKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAI 356
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
+ F M K G P+ ++ + +AC+ A V+EG +F M G+ P IEHY ++ +
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--- 331
LG AGHL EAEE + MP EP +W+AL ++H ++++ +R E L +L P +
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSY 476
Query: 332 --------------IVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMK 373
V ++ L + +K + +E + ++ D + ++++
Sbjct: 477 VALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQ 536
Query: 374 GLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
+ G+M R GY P+T V + DE+ + +ALQYHSE++A+A+GLIST P+ PL+I+
Sbjct: 537 AMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIV 596
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLRIC DCH ++K++S I R++IVRD KRFH F G CSC DYW
Sbjct: 597 KNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 97/240 (40%), Gaps = 67/240 (27%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-------------- 176
F S+L +C + GK++H L+ F +D + + L+ MY C
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 177 ------CNTRL---------------------------ARKVFDQLRKRNLSSWHLMISG 203
C L A+ +FD++ +R++ SW++MISG
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISG 244
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIV 262
YA NG + + LF++M+ + P+ T + V A A A++ G +++ KN
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK---- 300
Query: 263 PGIEHYIAIIKVLGSA--------GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
I I VLGSA G + EA + E +P + W A+ +HG E
Sbjct: 301 ------IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAI-TWSAIIGAFAMHGRAE 353
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 210/377 (55%), Gaps = 35/377 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F +++D C ++ +G+ VH ++ R+ A +V + N LI MYGKC + ARKVFD
Sbjct: 262 FVTVVDVCADIAVFGIGREVHGVIDARSEA---NVCVGNALINMYGKCASPDEARKVFDA 318
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-----GPHPDKETFLVVFAACASAE 243
++++++ +W+ MI+ Y NG G L ++++M+++ G D TF+ V AC+ A
Sbjct: 319 MQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAG 378
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
VK+ + M DYG P +I +LG AG L EAEEF+ MP+ P +W L
Sbjct: 379 LVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTIL 438
Query: 304 RNFAQIHGDVELEDRAEELLGDLDPSK-----AIVDKIPLPPRK---------------- 342
H DVE RA + + L P+ A+ + L R
Sbjct: 439 LGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRGVF 498
Query: 343 KQSATNMLEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE 398
K + + +E + ++ + D R YE+++ + G +RE GYVPD + VLH+ E
Sbjct: 499 KMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAARE 558
Query: 399 AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
AKEK +HSERLAIA+G+IS+P LRI+KNLR+C DCH+A KI+SK GR++IVRD
Sbjct: 559 AKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDA 618
Query: 459 KRFHHFRDGKCSCGDYW 475
RFH FR+G CSC DYW
Sbjct: 619 NRFHEFRNGSCSCEDYW 635
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+R+A++ + +D S S +V + L CG+ +I GKR+H + F L N L+
Sbjct: 41 LRDAVQLL-EDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLV 99
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
EMYGKC + + A+ VF +RN+ SW +M++ +A NG D L L E M G P+
Sbjct: 100 EMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSI 159
Query: 231 TFLVVFAACASAEAVKEG 248
TF+ + A A+ + G
Sbjct: 160 TFIELLGAVAALSWLDRG 177
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F LL + L ++ G+ +H + F+ D+ + N LI MY KC + A VF+ L
Sbjct: 161 FIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLT 220
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
R++ +W +++ YA NG D L +F M G P + TF+ V CA
Sbjct: 221 SRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCA 270
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 221/406 (54%), Gaps = 27/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S +V + + G EAI Q ++ Y S+L + + ++E+GK +H
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ D L + L++MY KC + A +VF+ L KRN +W +I +A +G+ D +
Sbjct: 297 GKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAI 356
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
+ F M K G P+ ++ + +AC+ A V+EG +F M G+ P IEHY ++ +
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--- 331
LG AGHL EAEE + MP EP +W+AL ++H ++++ +R E L +L P +
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSY 476
Query: 332 --------------IVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMK 373
V ++ L + +K + +E + ++ D + ++++
Sbjct: 477 VALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQ 536
Query: 374 GLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
+ G+M R GY P+T V + DE+ + +ALQYHSE++A+A+GLIST P+ PL+I+
Sbjct: 537 AMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIV 596
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLRIC DCH ++K++S I R++IVRD KRFH F G CSC DYW
Sbjct: 597 KNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 51/232 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-------------- 176
F S+L +C + GK++H L+ F +D + + L+ MY C
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 177 ------CNTRL---------------------------ARKVFDQLRKRNLSSWHLMISG 203
C L A+ +FD++ R++ SW++MISG
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISG 244
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIV 262
YA NG + + LF++M+ + P+ T + V A A A++ G +++ KN I
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEID 304
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A++ + G + +A + E +P + W A+ +HG E
Sbjct: 305 DVLGS--ALVDMYSKCGSIDKALQVFETLPKRNAI-TWSAIIGAFAMHGRAE 353
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+S+LD+C L ++ GK +H+ ++ DV N L+ MY KC +T AR VF+
Sbjct: 285 TFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDC 344
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ +W ++S Y+ GQ L +++M G PD TF +F AC+ + EG
Sbjct: 345 GLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGL 404
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
LYF M+ D+ IVP HY +I +LG G L EAEE V MP+ P V W L + ++
Sbjct: 405 LYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKV 464
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
+GD+++ RA + + +L+P + + I K +
Sbjct: 465 YGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKS 524
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
M+E + R+ ++ D L + +++ ++ Q+ AGY PDT+ VL D++EE K + L
Sbjct: 525 MIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELL 584
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSER+A+ GL+++ L I+KNLRIC DCH+ K++SK++ R+++VRD+ RFH F
Sbjct: 585 LFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIF 644
Query: 465 RDGKCSCGDYW 475
+ G CSCGDYW
Sbjct: 645 QRGSCSCGDYW 655
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 130 VFSSLLDSCGNLKS--IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ ++L SC +L +E GK +H F D+ + N LI MY KC + + A VF+
Sbjct: 85 TYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFE 144
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +NL S+ MI Y + + L+++M G PD + A C + ++E
Sbjct: 145 KMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPT---IRE 201
Query: 248 G 248
G
Sbjct: 202 G 202
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N L+ MYG+ A+ VFD +R ++L+S++ MI+ +A G+ + L+ +M
Sbjct: 220 SNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNL 279
Query: 226 HPDKETFLVVFAACASAEAVKEG 248
P+ TF V AC+ A+ EG
Sbjct: 280 EPNLWTFTSVLDACSKLGALTEG 302
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
K+ L N L+ YG+C + A F ++ ++N S+ +M+ Y N L LF++
Sbjct: 15 KETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKS 74
Query: 221 RKTGPHPDKETFLVVFAACA 240
++ T++ V +CA
Sbjct: 75 INEELQQNQATYVTVLKSCA 94
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 221/413 (53%), Gaps = 31/413 (7%)
Query: 94 QLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVH 151
L S + L C+ +A + + + G F+ SLL N+ SI G+++H
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
+ + + N LI MY KC + A +VF+ + RN+ SW MI+G+A +G
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
L F QM + G P++ T++ + +AC+ V EG+ +F M D+ I P +EHY +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA 331
+ +L AG L +A EF+ MPF+ V VW ++H + EL A + +LDP++
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 332 I----VDKIPLPPRKKQSATNM---LEEKNRVSDYRST---------DLYRGE------- 368
+ I K + +T M ++E+N V + + Y G+
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 369 --YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE----KALQYHSERLAIAYGLISTPP 422
Y+++ L +++ GYVPDT VLH ++EE E + L HSE++A+A+GLIST
Sbjct: 738 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 797
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+R+ KNLR+CGDCHNA+K +S + GRE+++RD RFHHF+DGKCSC DYW
Sbjct: 798 SRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A++ M +D FSSLL SC + +GK VH L D L N LI +Y
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 174 GKCCNTRLARKVFDQLR---KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
K ++ A VF+ +R KR++ SW M++ Y NG+ D + +F + + G P+
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDY 167
Query: 231 TFLVVFAACASAEAVKEG 248
+ V AC++++ V G
Sbjct: 168 CYTAVIRACSNSDFVGVG 185
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 102 LLSLCKE-GKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSA 158
+++ C + G REAI + + D F SS+ +C L+++ +GK++H S
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 159 FVKDVELNNKLIEMYGKCC---NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA-DGL 214
V DVE + L++MY KC + RKVFD++ ++ SW +I+GY N A + +
Sbjct: 300 LVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 215 MLFEQMRKTG-PHPDKETFLVVFAACAS 241
LF +M G P+ TF F AC +
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 131 FSSLLDSCGNLKSIEMGK-RVHELLRTSAFVKDVELNNKLIEMYGKCCNT-RLARKVFDQ 188
+++++ +C N + +G+ + L++T F DV + LI+M+ K N+ A KVFD+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ + N+ +W LMI+ G + + F M +G DK T VF+ACA E + G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSA-GHLIEAEEFVERMPFEPTVEVWEAL 303
L+ +++ G+V +E + + SA G + + + +RM + +V W AL
Sbjct: 289 KQLHSWAIRS--GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTAL 342
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS +CGNL +GK+V + + N +I M+ K A++ F+ L
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++NL S++ + G N L ++ + TF + + A+ ++++G
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 220/396 (55%), Gaps = 30/396 (7%)
Query: 102 LLSLC-KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSA 158
+++C + G A+EY + + + +D F+ S+L +CG L S+++G+ +++ R
Sbjct: 181 FIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEE 240
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
++ + N ++M+ KC +T AR +FD +++RN+ SW MI GYA NG + L LF
Sbjct: 241 IECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFT 300
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK--NDYGIVPGIEHYIAIIKVLG 276
M+ G P+ TFL V +AC+ A V EG YF +M ND + P EHY ++ +LG
Sbjct: 301 MMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLG 360
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----- 331
+G L EA EF+++M EP +W AL +H D+ L + ++L + P
Sbjct: 361 RSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420
Query: 332 ------------IVDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDLY----RGEYEK 371
VDK+ RK K +A + +E ++ + D+ + YEK
Sbjct: 421 LSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEK 480
Query: 372 MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKN 431
+ + ++R GYVPDT V HD++ E KE +L +HSE+LAIA+GLI+ P+R++KN
Sbjct: 481 LDEILKKIRNMGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKN 540
Query: 432 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
LR C DCH K +S++ RE+I+RD RFHHFR+G
Sbjct: 541 LRTCDDCHVFSKFVSRLTSREIIMRDKNRFHHFRNG 576
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 35/256 (13%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIE---MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
K++H ++ + F + L +L+E + G C AR+VFD++ K + W+ + GY
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMC---YARQVFDEMPKPRIFLWNTLFKGY 84
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDY---G 260
N + ++L+++MR G PD+ T+ V A + + G L+ ++KN + G
Sbjct: 85 VRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLG 144
Query: 261 IVPGIEHYIAIIKV--LGSAGHLIEAEEFVERMPFEPTVEVWE-------ALRNFAQIHG 311
IV E + +K L SA L E+ + + + + + V AL F ++
Sbjct: 145 IV-ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCA 203
Query: 312 DVELEDRAEEL--------LGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR--- 360
D D + LG LD + I D+ RK++ N++ E R+ +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLDIGEEIYDR----ARKEEIECNIIVENARLDMHLKCG 259
Query: 361 STDLYRGEYEKMKGLN 376
ST+ R ++ MK N
Sbjct: 260 STEAARVLFDDMKQRN 275
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 216/398 (54%), Gaps = 28/398 (7%)
Query: 106 CKE-GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C E G+ EA+E Q SS+L +C +++ MGK +H + V D
Sbjct: 376 CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD 435
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L+ MY KC + L+R VFD +R++++ +W+ MI A +G G + L LF++M
Sbjct: 436 LTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLL 495
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
+ P+ TF V + C+ + V+EG F M D+ + P HY ++ + AG L
Sbjct: 496 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLN 555
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------- 328
EA +F++ MP EPT W AL +++ +VEL + + L +++P
Sbjct: 556 EAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILV 615
Query: 329 -----SKAIVDKIPLPPR--KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNG 377
S+A +I + R K + L+ N+V + D E +K+ L
Sbjct: 616 TAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVE 675
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+M+ AGY PDT YVL DID+E K ++L HSE+LA+A+G+++ + +R+ KNLRICGD
Sbjct: 676 KMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGD 735
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CHNAIK MSK+VG ++VRD+ RFHHF++G CSC D W
Sbjct: 736 CHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C LK ++ GK +H V ++ + + L+ +Y KC + R AR VFD +
Sbjct: 269 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 328
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ SW+ +++ Y N + G LF +M + G D+ T+ V C +E
Sbjct: 329 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 388
Query: 252 FEIMK 256
F M+
Sbjct: 389 FRKMQ 393
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 104 SLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
+L G EAI+ Q+ VF + +C K VH+ +
Sbjct: 138 ALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMS 197
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + N LI YGKC AR+VFD L R++ SW + S Y G G+ +F +M
Sbjct: 198 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 257
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
+G P+ T + ACA + +K G
Sbjct: 258 WSGVKPNPMTVSSILPACAELKDLKSG 284
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 209/371 (56%), Gaps = 31/371 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E+G+ VH+ +R V+++ LI+MY KC + A VF + +
Sbjct: 239 SVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESK 298
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W +MI YA +G G + + LFE+M+K G PD TFL V AC+ + V EG YF
Sbjct: 299 DRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYF 358
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ MK D+GIVPGI+HY + +L +G L A +F++ +P PT +W L + HGD
Sbjct: 359 DDMK-DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGD 417
Query: 313 VELEDRAEELLGDLDPSKA--------------------IVDKIPLPPRK---KQSATNM 349
EL R E + LD S +V K L K K +
Sbjct: 418 FELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRK--LMSEKGVVKVPGCSS 475
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLN----GQMREAGYVPDTRYVLH-DIDEEAKEKAL 404
+E N V ++ + D + ++ + + Q++ GYVP+T +V H ++ EE K +L
Sbjct: 476 IEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISL 535
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSE+LAIA+GL++T P LR++KNLR+C DCH+ K++S + R +I+RD RFHHF
Sbjct: 536 KYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHF 595
Query: 465 RDGKCSCGDYW 475
+G CSCGDYW
Sbjct: 596 EEGICSCGDYW 606
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL +C ++ E G++ H L + LI MY +C + R AR +F
Sbjct: 136 FVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTD 195
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ S++ MI+ + + + L+LF +M+ G P T + V +ACA A++ G
Sbjct: 196 GGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRW 255
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ ++ G+ ++ A+I + G L +A + + M
Sbjct: 256 VHDYVRK-IGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGM 295
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 182 ARKVFDQLRKRNLSSWH-LMISGYA-----ANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
AR+VFD++ + W+ ++ GYA ++ + A + +F +M + G PD TF+ +
Sbjct: 80 ARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSL 139
Query: 236 FAACASAEAVKEG 248
ACA+A A +EG
Sbjct: 140 LKACAAARAGEEG 152
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 209/373 (56%), Gaps = 32/373 (8%)
Query: 134 LLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ +C N+ S G++VH L L+ + +NN LI MY KC N R A+ +FD + +
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEH 408
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N S++ MI+GYA +G G L LF++M + G P TF+ V AACA V++G +YF
Sbjct: 409 NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYF 468
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+MK +GI P H+ +I +LG AG L EAE +E +PF+P W AL +IHG+
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGN 528
Query: 313 VELEDRAEELLGDLDP--------------------SKAIVDKIPLPPR--KKQSATNML 350
VEL +A L LDP A V K+ + R KK+ + +
Sbjct: 529 VELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKL-MRDRGVKKKPGCSWI 587
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEA----KEK 402
E R+ + + D + +K++ +M ++ GY P+ R L D+ +E
Sbjct: 588 EVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEEL 647
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSE+LA+++GL+ST P+ + KNLRIC DCHNAIK +S++V RE+ VRD+ RFH
Sbjct: 648 RLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFH 707
Query: 463 HFRDGKCSCGDYW 475
F+DG+CSCG YW
Sbjct: 708 CFKDGQCSCGGYW 720
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-ARKV 185
D+F+ S+L + N++ + G + H L S + ++ + + LI++Y KC L RKV
Sbjct: 239 DIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKV 298
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGAD-GLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
FD++ +L W+ MISGY+ +D L F Q++ G PD + + V +AC++ +
Sbjct: 299 FDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSS 358
Query: 245 VKEG------FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
+G L +I N + A+I + G+L +A+ + MP TV
Sbjct: 359 PSQGRQVHGLALKLDIPSNRISVNN------ALIAMYSKCGNLRDAKTLFDTMPEHNTVS 412
Query: 299 VWEALRNFAQIHG 311
+ +AQ HG
Sbjct: 413 YNSMIAGYAQ-HG 424
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L +C + + GK +H L S L+N + +Y KC AR+VFD
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ S++ +IS YA LF++M P PD ++ + AA A + F
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAFQ 126
Query: 251 YFEIMKNDY 259
F M+ +
Sbjct: 127 LFLEMREAF 135
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 206/373 (55%), Gaps = 36/373 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C +L + ++G ++ + D + N +I MY KC ARKVFD
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFD 563
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++ SW+ MI+GY+ +G G + +F+ + K G PD +++ V + C+ + V+E
Sbjct: 564 FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G YF++MK + I PG+EH+ ++ +LG AGHL EA++ ++ MP +PT EVW AL +
Sbjct: 624 GKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSAC 683
Query: 308 QIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSA 346
+IHG+ EL + A + + +LD S ++ KI KK
Sbjct: 684 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPG 743
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E N+V +++ D+ + +K+ L ++ GYV +
Sbjct: 744 YSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYV-----------RTDSPR 792
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+GL+S P MP+ I+KNLRICGDCH IK++S + GRE ++RD RFH
Sbjct: 793 SEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFH 852
Query: 463 HFRDGKCSCGDYW 475
HF G CSCGDYW
Sbjct: 853 HFNGGSCSCGDYW 865
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + +L + G+VREA++ + S D ++S L +C L S+ GK++H +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ D + + L+E+Y KC + A+ VF+ L RN +W ++I+G+ +G + +
Sbjct: 297 IRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESV 356
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACAS 241
LF QMR D+ + + C S
Sbjct: 357 ELFNQMRAELMTLDQFALATLISGCCS 383
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G E++E Q + D F+ +L+ C + + +G+++H L S ++ V
Sbjct: 348 QHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407
Query: 165 LNNKLIEMYGKCCNTRL-------------------------------ARKVFDQLRKRN 193
++N LI MY KC N + AR+ FD + +N
Sbjct: 408 VSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKN 467
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W+ M+ Y +G DGL ++ M + PD T++ +F CA A K G
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLG---D 524
Query: 253 EIMKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+I+ G++ A+I + G ++EA + + + + V W A+ H
Sbjct: 525 QIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVS-WNAMITGYSQH 583
Query: 311 GDVELEDRAEELLGDL 326
G + +A E+ D+
Sbjct: 584 G---MGKQAIEIFDDI 596
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
DV ++L+D ++++ R+ ++ + N ++ Y K A ++FD
Sbjct: 174 DVAAALVDMFVRCGTVDLASRLFVRIKEPT----IFCRNSMLVGYVKTYGVDHALELFDS 229
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +R++ SW++M+S + +G+ + L + M+ G D T+ ACA +++ G
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 249 -FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
L+ ++++N +P I+ Y+ A++++ G EA+ + V +
Sbjct: 290 KQLHAQVIRN----LPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG 345
Query: 306 FAQIHG----DVELEDRAEELLGDLD 327
F Q HG VEL ++ L LD
Sbjct: 346 FLQ-HGCFTESVELFNQMRAELMTLD 370
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 206/367 (56%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +L ++ G+ + + + + +V + LI+MY KC A K+F +R +N
Sbjct: 249 VLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKN 308
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W+++ISGYA NG+G L F +M PD+ TFL V AC V EG YF
Sbjct: 309 VYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFT 368
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK ++G+ P IEHY ++ +LG AG L EA++ ++ M +P +W L +IHG++
Sbjct: 369 SMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNI 428
Query: 314 ELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEE 352
+L + A + L +L+P+ + + + +K + +E
Sbjct: 429 QLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEI 488
Query: 353 KNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
N V ++ ++ + +E+ + +N +++ AGYV DT +DI+EE KE +L YHS
Sbjct: 489 DNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHS 548
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL+ +P + LRI+KNLRIC DCH KI+SK+ R++ VRD RFHHF G
Sbjct: 549 EKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGA 608
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 609 CSCKDYW 615
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L S L E+GK +H + F +V ++ L+ MYG C + AR+VFD++
Sbjct: 145 FPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIP 204
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN+ SW+ +I+GY N + +F +M+ G P + T + V ACA A+ +G
Sbjct: 205 DRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRW 264
Query: 251 ---YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
Y + + + G A+I + G + EAE+ + M + V W L
Sbjct: 265 IDDYIDHNRLRLNVFVG----TALIDMYAKCGVVDEAEKIFKAMRVK-NVYTWNVL 315
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 215/401 (53%), Gaps = 27/401 (6%)
Query: 102 LLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
L + G+ REA+ Q A + S+L +C + ++E G VH + +
Sbjct: 228 LTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGM 287
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V L L++MY KC ++ +VF+ +R+RN+ +W +SG A NG G + L LF++
Sbjct: 288 RVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKR 347
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M G P+ TF+ V C+ A V+EG F+ MK+ + + P +EHY ++ + G AG
Sbjct: 348 MESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAG 407
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL----DPSKAIVDK 335
L +A +F+ MP EP VW AL N ++IH +V+L A L ++ D + ++
Sbjct: 408 RLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSN 467
Query: 336 IPLPPR-----------------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKG 374
I KK + +E +V ++ +S Y+ +
Sbjct: 468 IYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAE 527
Query: 375 LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRI 434
++ ++R GY +T+ VL DI+EE KE A+ HSE+LA+A+GLI+ P +RI+KNLR+
Sbjct: 528 MSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRV 587
Query: 435 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
C DCH+ K++SK+ RE+++RD RFHHF+ G CSC DYW
Sbjct: 588 CKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + +R+ +W+ M++GY G+ + L LF++M+K G + T + V ACA
Sbjct: 209 ARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQ 268
Query: 242 AEAVKEGF 249
A++ G
Sbjct: 269 MGALERGM 276
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 213/382 (55%), Gaps = 45/382 (11%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNKLIEMYGKC------CNTRLARKV 185
S++D C +L ++E+G+ + + L + V +DV + + ++ M KC C AR
Sbjct: 545 SVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMP 604
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEA 244
D +++L +W+ MI+ YA +G G L LF M+ ++ PD TF+ V + C+ A
Sbjct: 605 DD---RKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGL 661
Query: 245 VKEGFLYFEIMKNDYGIVPG-IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
V++G F + + GI +EHY ++ VLG G+L EAE+F+ +MP VW +L
Sbjct: 662 VEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 721
Query: 304 RNFAQIHGDVELEDRAEELLGDL----------------------DPSKAIVDKIPLPPR 341
+GD+E +RA +L D + D +
Sbjct: 722 LGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVK 781
Query: 342 KKQSATNMLEEKNRVSDY----RS---TDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHD 394
K+ + + KNRV ++ RS +D E E++KGL +REAGYVPDTR VLHD
Sbjct: 782 KRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGL---IREAGYVPDTRLVLHD 838
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
++EE KE+ L YHSE+LAIA+GLIS P R +R+IKNLR+C DCH A K ++++ RE+
Sbjct: 839 VEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIA 898
Query: 455 VRDNKRFHHF-RDGKCSCGDYW 475
VRD RFHHF +DG+CSCGDYW
Sbjct: 899 VRDCNRFHHFGKDGECSCGDYW 920
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L SCG+ S+ + + +H + F+ DV + L+ MYG+C + + VF+ +
Sbjct: 240 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 299
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVF-AACASA------E 243
RN SW+ MI+ +A G + ++ +M++ G P+K TF+ AAC+S+
Sbjct: 300 VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGES 359
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A G++ ++ D ++ G A++ + GS G + A + +P + V W A+
Sbjct: 360 AALHGWIACAGLEGD--VMVG----TALVTMYGSTGAIDRARAAFDAIPAKNIVS-WNAM 412
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKR--VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F + L + + S ++G+ +H + + DV + L+ MYG AR FD
Sbjct: 341 FVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDA 400
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +N+ SW+ M++ Y NG+ + + LF M++ P+K ++L V C +
Sbjct: 401 IPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARS- 459
Query: 249 FLYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEA 284
++ E++ N G+ E IA ++++ +G L EA
Sbjct: 460 -IHAEVVGN--GLFAQ-ESSIANGVVRMFARSGSLEEA 493
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
SI + VH+ +R S +D+ + L++ YGKC A +VF +++ +L W+ I
Sbjct: 150 SIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIM 209
Query: 203 GYAANGQGAD-GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGI 261
A N + D L+L +M G P++ +F+ + ++C ++ + G
Sbjct: 210 ACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLA-RSIHARVEELGF 268
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
+ + A++ + G G + E+ E M V W A+ FAQ
Sbjct: 269 LGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS-WNAMIAAFAQ 315
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ + LL C + G+++H + ++ L N L++MY KC + A F
Sbjct: 25 ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSA 84
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMR---KTGPHPDKETFLVVFAACASAE 243
LR R +++W+ +I AA A L+ +M+ + P+K T + V A AS +
Sbjct: 85 LRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGD 139
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 3/198 (1%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLR 155
S + L + G+ REA+E S + S L G + + + +H E++
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVS-YLAVLGCCEDVSEARSIHAEVVG 466
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
F ++ + N ++ M+ + + A FD ++ SW+ ++ +A +
Sbjct: 467 NGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAIT 526
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
F M+ G PDK T + V CA ++ G + + + + A++ ++
Sbjct: 527 AFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMV 586
Query: 276 GSAGHLI-EAEEFVERMP 292
G + E E RMP
Sbjct: 587 AKCGSSVDECERLFARMP 604
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 201/372 (54%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L++C ++ ++E GK V E + D + ++ +YGKC R++FD +
Sbjct: 458 FVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVC 517
Query: 191 KR-NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R ++ W+ MI+ YA GQ + L LF +M G PD +F+ + AC+ +G
Sbjct: 518 SRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGK 577
Query: 250 LYFEIMKNDY-GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF M +Y + I+H+ + +LG G L EAEEF+E++P +P W +L +
Sbjct: 578 SYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACR 637
Query: 309 IHGDVELEDRAEELLGDLDPSKAI-----------------VDKI----PLPPRKKQSAT 347
H D++ L L+P A V K+ KK+
Sbjct: 638 NHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGV 697
Query: 348 NMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + D+ + D R E++ L+ QM+E GYVPDT+ VLH +DE+ KE+
Sbjct: 698 STIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERL 757
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLAIA GLISTP PLR+ KNLR+C DCH A K++SKI GR+++VRD RFH
Sbjct: 758 LFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHL 817
Query: 464 FRDGKCSCGDYW 475
F+DGKCSC DYW
Sbjct: 818 FKDGKCSCQDYW 829
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SLL +C + + + +G+ +H+ + K+V + N L+ MY KC + AR VFD++
Sbjct: 349 TYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKM 408
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM---RKTGP----HPDKETFLVVFAACASA 242
+R++ SW +IS Y A+ LF+QM K G PD F+ + ACA
Sbjct: 409 EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADV 468
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
A+++G + E G+ A++ + G G + E + + P V++W A
Sbjct: 469 SALEQGKMVSE-QAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNA 527
Query: 303 L----RNFAQIHGDVELEDRAE 320
+ F Q H ++L R E
Sbjct: 528 MIAVYAQFGQSHEALKLFWRME 549
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
++ LL C +++ G+++H L ++ + ++ L N ++ MY C + A+ FD
Sbjct: 45 TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L +RNL SW +++ +A +GQ + L E+MR+ G PD TF+ +C E++++G
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164
Query: 249 F-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ ++ + I P + + A++ + G L A+ +M V W +
Sbjct: 165 IRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAH 222
Query: 308 QIHGDV 313
+HG+V
Sbjct: 223 ALHGNV 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 109 GKVREAIEY------MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
G V EA+ + +G A+ SA ++L +C + ++ G+ +H + S F +
Sbjct: 226 GNVWEALRHFRFMLLLGIKATKSA----MVTILSACSSPALVQDGRLIHSCIALSGFESE 281
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQM 220
+ + N ++ MYG+C ARKVFD + + R++ SW++M+S Y N +G D + L+++M
Sbjct: 282 LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM 341
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
+ DK T++ + +AC+SAE V G + + + ND
Sbjct: 342 Q---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVND 376
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A+E M QD F + L SCG+ +S+ G R+H+++ S D +++N L+ MY
Sbjct: 132 ALERMRQDGVRPDAV-TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMY 190
Query: 174 GKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
KC + A++VF ++ R RN+ SW +M +A +G + L F M G K
Sbjct: 191 KKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAM 250
Query: 233 LVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFV 288
+ + +AC+S V++G L + + G E + A++ + G G + EA +
Sbjct: 251 VTILSACSSPALVQDGRLIHSCIA-----LSGFESELLVANAVMTMYGRCGAVEEARKVF 305
Query: 289 ERMPFEPTVEVWEALRN 305
+ M EALR+
Sbjct: 306 DAMD--------EALRD 314
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 205/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E GK VH +R + L L++ Y KC A + F+ + +
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N +W +I G A NG+G + L LF MRK P TF+ V AC+ + V+EG +F
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M DYGI P EHY ++ +LG AG + EA +F+ MP EP +W AL + +H +
Sbjct: 446 DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKN 505
Query: 313 VELEDRAEELLGDLDPS-------------------KAIVDKIPLPPR--KKQSATNMLE 351
VE+ + A + + L+PS A + + + R +K +++E
Sbjct: 506 VEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIE 565
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++ + D + Y+K++ + +++ AGY+P+T V ++DE KE ++ +H
Sbjct: 566 LDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHH 625
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL+ P +R+ KNLR+C DCH+A K++SK+ RE++VRD RFHHF+DG
Sbjct: 626 SEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDG 685
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 686 TCSCNDYW 693
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G E +E +D S++ +CG + ++GK V E + V++
Sbjct: 197 KNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN 256
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L LI+MY KC AR++FD ++ R++ +W MISGY Q + L LF +M+
Sbjct: 257 LMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE 316
Query: 225 PHPDKETFLVVFAACASAEAVKEGFL---YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P+ T + V +ACA A++ G Y + I+ G A++ G +
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG----TALVDFYAKCGCI 372
Query: 282 IEAEEFVERMPFEPTVEVWEAL 303
+A E E MP + + W AL
Sbjct: 373 DDAVEAFESMPVKNS-WTWTAL 393
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 2/182 (1%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AS + L SC + ++++G+ + + D + + LI MY C +
Sbjct: 113 ASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAA 172
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A+ +FD + + + W+ +I+ Y NG + + +F+ M + G D+ T + V AC
Sbjct: 173 AQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGR 232
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
K G E + ++ G+V A+I + G L +A + M V W
Sbjct: 233 IGDAKLGKWVAEYV-DEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVV-AWS 290
Query: 302 AL 303
A+
Sbjct: 291 AM 292
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 208/368 (56%), Gaps = 26/368 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C N+ +++G+ VH + F + L I+MY KC + A+ +F+ + R
Sbjct: 315 SALLACSNIGFLKLGRSVHGFI-VRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDR 373
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L W+ MI+ A+G+G D L LF++M +TG PD TF + +A + + V+EG L+F
Sbjct: 374 DLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF 433
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M N + I P +HY+ ++ +L +G + EA + + M EPTV +W AL + +
Sbjct: 434 GCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKK 493
Query: 313 VELEDRAEELLGDLDPSK----AIVDKIPLPPRK-----------------KQSATNMLE 351
+EL + + + +L P A+V + +K K + +E
Sbjct: 494 LELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIE 553
Query: 352 EKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+ + D + E K+ L+ +MR+ GY+P T +V HD++EE KE+ L YH
Sbjct: 554 IRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYH 613
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL++T P L IIKNLR+CGDCH+AIK +SKI RE++VRD KRFHHF+DG
Sbjct: 614 SEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDG 673
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 674 VCSCRDYW 681
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 7/184 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ +C +++ MG VH L DV L++MY K +A +VF +
Sbjct: 211 VMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLM 270
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
RN SW MISG+A NGQ + L LF M+ +G PD + AC++ +K G
Sbjct: 271 VHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F + + D+ + G A I + G L A+ M + + +W A+
Sbjct: 331 SVHGFIVRRFDFNCILG----TAAIDMYSKCGSLASAQMLFN-MISDRDLILWNAMIACC 385
Query: 308 QIHG 311
HG
Sbjct: 386 GAHG 389
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L +C L + G+ V + + + DV + + L+ +Y + A KVFD++
Sbjct: 111 FTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+ +W M++G+ + GQ D + ++ +MR+ G D+ + V AC +A V+ G
Sbjct: 171 RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 203/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L ++E GK VH + + + N LI MYG+C ++VFD ++KR
Sbjct: 287 SVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKR 346
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ +IS Y +G G + +FE M G P TF+ V AC+ A V+E + F
Sbjct: 347 DVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILF 406
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M N Y I P +EHY ++ +LG A L EA E ++ M F+P VW +L +IH +
Sbjct: 407 ESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCN 466
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNMLE 351
VEL +RA +L +L+P A ++ I R +K + + +E
Sbjct: 467 VELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIE 526
Query: 352 EKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
K ++ S + Y + E++ L +++ GYVP T V +D+DEE KE+ + H
Sbjct: 527 VKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGH 586
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
S +LA+A+GLI+T +RI NLR+C DCH +K +SK RE+++RD RFH F+DG
Sbjct: 587 SGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDG 646
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 647 VCSCGDYW 654
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLC+ G +++A++ + + + + F L++SC S+ G VH L S +D
Sbjct: 52 SLCRGGNLKQAVQLLCCEPNPTK--KTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDP 109
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI MY + A KVFD+ R++ + W+ + A +G D L+L+ QM
Sbjct: 110 YLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWI 169
Query: 224 GPHPDKETFLVVFAACASAE 243
G ++ T+ V AC +E
Sbjct: 170 GIPSNRFTYTYVLKACVVSE 189
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H + + V + L+++Y + A VF + +N+ SW MI+ YA
Sbjct: 198 GKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAK 257
Query: 207 NGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
N L LF+ M P+ T + V ACAS A++ G L + Y + G
Sbjct: 258 NEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLV-----HAYVLRRG 312
Query: 265 IEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ + ++ L G G + + + M + W +L + +HG
Sbjct: 313 LDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVIS-WNSLISIYGMHG 362
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 207/367 (56%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +L + GK +HE + + +V + LI+MY KC KVF+++R++N
Sbjct: 196 VLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKN 255
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W+++ISGYA NGQG L F +M PD+ TFL V AC V EG F
Sbjct: 256 VYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFM 315
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK +G+ P IEHY ++ +LG AG L EA E ++ M EP +W AL ++HG+
Sbjct: 316 SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
Query: 314 ELEDRAEELLGDLDPSK-----------------AIVDKI----PLPPRKKQSATNMLEE 352
+L + + L +L+P+ A V K+ L +K + +E
Sbjct: 376 KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEI 435
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
N V ++ +++ + E+E ++ L +++E GYV T L+DI++E KE ++ YHS
Sbjct: 436 NNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHS 495
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL+++P LRI+KNLRIC DCH K++S + R ++VRD RFHHF +G
Sbjct: 496 EKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGF 555
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 556 CSCRDYW 562
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L + L +GK +H ++ F+ DV + L+ +Y C + A ++FD++
Sbjct: 92 FPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMP 151
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-- 248
+RN +W+ +I+GY N + + F M G P + T +VV +AC+ A +G
Sbjct: 152 ERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKW 211
Query: 249 ---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
F+Y ++ + G A+I + G + E E+ E + E V W L +
Sbjct: 212 IHEFIYHNRLR--LNVFVG----TALIDMYAKCGAVYEVEKVFEEIR-EKNVYTWNVLIS 264
Query: 306 FAQIH--GDVELEDRAEELLGDLDPSKA 331
++ GD L+ + L+ + P +
Sbjct: 265 GYAMNGQGDAALQAFSRMLMENFKPDEV 292
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 193/355 (54%), Gaps = 26/355 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H L FV + L + L++MY +C +R VF+ +R ++L W MI+ Y
Sbjct: 603 GKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGM 662
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
+G G + LF +M PD F+ V AC+ + + EG + E MK +Y + P E
Sbjct: 663 HGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPE 722
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
HY ++ +LG A HL EA +FV+ M EPT EVW AL QIH + EL + A + L ++
Sbjct: 723 HYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEM 782
Query: 327 DPSK----AIVDKIPLPPR-----------------KKQSATNMLEEKNRVSDYRSTDLY 365
DP +V + R KK + +E N+V + + D
Sbjct: 783 DPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKS 842
Query: 366 RGE----YEKMKGLNGQM-REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIST 420
+ Y K+ + ++ +E GYV T++VLH+ EE K + L HSERLAIAYG+++T
Sbjct: 843 HPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTT 902
Query: 421 PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P LRI KNLR+CGDCHN K++SK REL++RD RFHHF+ G CSCGD W
Sbjct: 903 PEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
F +L +CG LK G VH L +V V + N ++ MY KC + AR++FD++
Sbjct: 183 FPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 242
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
K ++ SW+ MIS Y++NGQ + L LF +M+K P+ TF+ AC + +K+G
Sbjct: 243 EKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM 302
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
F++ ++K+ Y I + + A+I + G + EA M T+ L F Q
Sbjct: 303 FIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ 360
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 101 NLLSLCKEGKVREAIE-----YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELL 154
+L +CK G V EA + + Q S + + +SS+L+ CG+ K++ G++VH ++
Sbjct: 46 SLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMI 105
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
++A V L+ +L+ MYGKC A K+FD + + + +W+ MI Y NG+ L
Sbjct: 106 TSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSL 165
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACA-------SAE----AVKEGFLYFEIMKNDYGIVP 263
L+ +MR +G D TF + AC AE A+KEG++ + N
Sbjct: 166 ELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVAN------ 219
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+I+ + L A + +RMP + V W ++
Sbjct: 220 ------SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 253
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 37/290 (12%)
Query: 22 NSKISHSISAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGH 81
+S I + H+ LKSS + + A N + RF K +
Sbjct: 295 SSFIKQGMFIHATVLKSSYYINVFVA----NALIAMYARFGKMGE---------AANIFY 341
Query: 82 SQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCG 139
+ + D + N+ L N G EA+++ + A D+ + S++ +
Sbjct: 342 NMDDWDTISWNSMLSGFVQN-------GLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 394
Query: 140 NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
+ G ++H + D+++ N L++MY K C+ + +FD++ +++ SW
Sbjct: 395 RSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 454
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE---AVKEGFLYFEIMK 256
+I+G+A NG + L LF +++ G D + AC+ + +VKE
Sbjct: 455 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE--------I 506
Query: 257 NDYGIVPGIEHYI---AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ Y I G+ + I+ V G G++ A E + F+ V W ++
Sbjct: 507 HSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSM 555
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 109 GKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EA+ G Q AS + F + L +C + I+ G +H + S++ +V +
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI MY + A +F + + SW+ M+SG+ NG + L + +MR G
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380
Query: 227 PDKETFLVVFAACA 240
PD + + AA A
Sbjct: 381 PDLVAVISIIAASA 394
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 208/370 (56%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +I++G+ +H + R L LI+MY KC + A++VFD +
Sbjct: 341 SILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSML 400
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+LSSW+ MI G+A +G+ +F +MRK G PD TF+ + +AC+ + + G
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRH 460
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M DY ++P +EHY +I + G +G EAE+ + M EP +W +L ++H
Sbjct: 461 IFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMH 520
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
G+VEL + + L ++P S ++ I KK +
Sbjct: 521 GNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSS 580
Query: 350 LEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D + R Y ++ + + EAG+VPDT VL +++EE KE AL+
Sbjct: 581 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALR 640
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHHFR
Sbjct: 641 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFR 700
Query: 466 DGKCSCGDYW 475
DG+CSC DYW
Sbjct: 701 DGECSCNDYW 710
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D ++L +C SIE+G++VH + F ++++
Sbjct: 214 GNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIV 273
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI++Y KC A +F L +++ SW+ +I GY + L+LF+ M ++G
Sbjct: 274 NALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEK 333
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T L + +ACA A+ G +++ I K G+ ++I + G + A+
Sbjct: 334 PNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQ 393
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
+ + M ++ W A+ +HG
Sbjct: 394 QVFDSM-LNRSLSSWNAMIFGFAMHG 418
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 36/185 (19%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-------- 181
F LL SC + + G+++H + F D+ ++ LI MY + N RL
Sbjct: 105 TFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQ--NGRLEDAQKVXD 162
Query: 182 -------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
A K+FD++ +++ SW+ ISGYA G + L L
Sbjct: 163 KSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALEL 222
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F++M KT PD+ T + V +ACA + +++ G + ND+G ++ A+I +
Sbjct: 223 FKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWI-NDHGFGXNLKIVNALIDLYS 281
Query: 277 SAGHL 281
G L
Sbjct: 282 KCGEL 286
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCC------NTRLARKV 185
SLL C L+S+ + +H ++++T + L+ KL+E C A V
Sbjct: 7 SLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALS-KLLE---XCVLSPHFDGLPYAISV 59
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD +++ L W+ M G+A + L L+ M G P+ TF + +CA + A
Sbjct: 60 FDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAF 119
Query: 246 KEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
KEG L+ +++K +G + + ++I + G L +A++ ++ V +
Sbjct: 120 KEGQQLHGQVLK--FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALIT 177
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDL 364
+A G ++ + + D+IP+ +++ +S Y T
Sbjct: 178 GYAS--------------RGXIESAHKMFDEIPVK--------DVVSWNAXISGYAET-- 213
Query: 365 YRGEYEKMKGLNGQMREAGYVPD 387
G Y++ L +M + PD
Sbjct: 214 --GNYKEALELFKKMMKTNVRPD 234
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 199/366 (54%), Gaps = 23/366 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C ++E GK VH + D L L++MY KC LA +VF LR R
Sbjct: 179 SVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRAR 238
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGFLY 251
N +W+ MI+G A NG A L +F QM G PD+ TF+ V AC+ A V G +
Sbjct: 239 NTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEH 298
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F + YG+ +EHY ++ +L +GHL EA + + MP +P V VW AL ++H
Sbjct: 299 FYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHK 358
Query: 312 DVELEDRA-----------EELLGDLDPSKAIVDKIPLPPRKKQS-------ATNMLEEK 353
+V++ + LL +L + + + R +S + +E
Sbjct: 359 NVKMAENVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMD 418
Query: 354 NRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
+ ++ S D Y+ K+ + G+M++ GYV +T V +DI++E KE+AL YHSE
Sbjct: 419 GSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSE 478
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
+LAIA+GLI PP +RI+KNLR C DCH+ K++SKI RE++VRD RFHHFR G C
Sbjct: 479 KLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARFHHFRGGAC 538
Query: 470 SCGDYW 475
SC D+W
Sbjct: 539 SCNDFW 544
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+VF+++ +R+L SW+ MISG N + L LF M + G P++ T + V +AC
Sbjct: 127 ARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTG 186
Query: 242 AEAVKEG 248
A A++ G
Sbjct: 187 AGALETG 193
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H + F+ NN I+ Y AR+VFD + +R+ S++ MI GYA +G
Sbjct: 33 LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVV-FAACASAEAVKEGF 249
LFE R P P T +V F E+ + F
Sbjct: 93 VGSAQRLFE--RVLAPTPVTWTSMVAGFCRAGDVESARRVF 131
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 200/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C +L +++ GK H + + V L L++MY KC N A KVF ++ ++
Sbjct: 247 SVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEK 306
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W I G A NG G L LF M+ G P++ TF+ V C+ V EG +F
Sbjct: 307 NVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHF 366
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ MK D+GI P +EHY ++ + G AG L EA F+ MP +P W AL N +++ +
Sbjct: 367 DSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKN 426
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+EL + A L G+ D + + K +++E
Sbjct: 427 MELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVME 486
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQ----MREAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++ S D Y+ ++ + G+ ++ AGYV T VL DI+EE KE AL H
Sbjct: 487 VNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKH 546
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE++AIA+GL S +P+RI+KNLRIC DCH+ K++SKI RE+IVRD RFHHF+DG
Sbjct: 547 SEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDG 606
Query: 468 KCSCGDYW 475
+CSC D+W
Sbjct: 607 ECSCKDFW 614
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ ++ KC + AR +FD + +R+ SW+ MI+GYA GQ + L LF+ M+
Sbjct: 175 DLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQ 234
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
G ++ + + V AC A+ +G
Sbjct: 235 MDGVKVNEVSMISVVTACTHLGALDQG 261
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 226/410 (55%), Gaps = 36/410 (8%)
Query: 100 VNLLSLCKEGKVREAIEYMGQ-------DASASAGYDVFSSLLDSCGNLKSIEMGKRVHE 152
+N +C GK +EA++ + +A S++L +CG L ++E GK VH
Sbjct: 166 INGYVMC--GKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA 223
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGA 211
+ D+ L LI+MY KC + A++VF+ L K+++ ++ MI A G
Sbjct: 224 YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
Query: 212 DGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA 270
+ LF +M + +P+ TF+ + AC + EG YF++M ++GI P I+HY
Sbjct: 284 ECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGC 343
Query: 271 IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-- 328
++ + G +G + EAE F+ MP EP V +W +L + +++ GD++ + A + L +LDP
Sbjct: 344 MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMN 403
Query: 329 -------------------SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEY 369
K I ++ + K + +E + V ++ D + E
Sbjct: 404 SGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQES 463
Query: 370 EKMKGLNGQ----MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMP 425
E++ + + +REAGYV DT+ VL D++E+ KE AL YHSE+LAIA+ L+ T P P
Sbjct: 464 ERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTP 523
Query: 426 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+RIIKNLRICGDCH +K++SK+ RE++VRD RFHHFRDG CSC D+W
Sbjct: 524 VRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 40/245 (16%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-- 181
S + F LL S N + +G+R H + KD + L+ MY C + R
Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 182 -----------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
ARK+FD++ +RN+ SW +I+GY G+ +
Sbjct: 118 RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE 177
Query: 213 GLMLFEQMRKTGPH-----PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
L LF +M+ P+ P++ T V +AC A+++G + + Y + I
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVL 236
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLD 327
A+I + G L A+ + + V+ + A+ ++G L D +L ++
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG---LTDECFQLFSEMT 293
Query: 328 PSKAI 332
S I
Sbjct: 294 TSDNI 298
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 206/386 (53%), Gaps = 28/386 (7%)
Query: 118 MGQDAS-ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC 176
M QD S + S+L +C ++E G+R+H+ + + L MY KC
Sbjct: 230 MLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKC 289
Query: 177 CNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
+ AR FD + + +NL +W+ MI+ YA++G G + + +FE M + G PD TF+
Sbjct: 290 YSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMG 349
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
+ + C+ + + G +F M + + P +EHY ++ +LG AG L+EA+E + +MP +
Sbjct: 350 LLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQ 409
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS---------------------KAIV 333
VW AL + H ++E+ + A L L+P K +
Sbjct: 410 AGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLR 469
Query: 334 DKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTR 389
+ KK + +E + + D + Y+ ++ L +++ AGY+PDT
Sbjct: 470 ALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTS 529
Query: 390 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIV 449
+VLHDI EE KE L HSE+LAIA+GL++T P + LR+ KNLRICGDCH A K +SKI
Sbjct: 530 FVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIY 589
Query: 450 GRELIVRDNKRFHHFRDGKCSCGDYW 475
RE+IVRD RFH F+DG CSCGDYW
Sbjct: 590 EREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 33/148 (22%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL---- 189
+L SC +L + MG+ VH D + LI+MY KC ARK+FD++
Sbjct: 113 VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRD 172
Query: 190 ---------------------------RKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
RN+ SW MISGY NG L LF++M +
Sbjct: 173 MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQ 232
Query: 223 TGPH--PDKETFLVVFAACASAEAVKEG 248
G P+ T + V ACA + A++ G
Sbjct: 233 DGSEMKPNWVTIVSVLPACAQSAALERG 260
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 214/372 (57%), Gaps = 29/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
V +LL +C +L +++GK +H +LRT D + +I+MY KC + A+ +FD+
Sbjct: 308 VVGALL-ACSDLGLLKLGKSIHGFILRTLEL--DRMVGTAVIDMYSKCGSLSSAQMLFDK 364
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R+L SW++MI+ A+G+G D L LF++M++ PD TF + +A + + V+EG
Sbjct: 365 VVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEG 424
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+F M N+YGI PG +H + I+ +L +G + EA V + +PT+ + AL +
Sbjct: 425 KFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCL 484
Query: 309 IHGDVELEDRAEELLGDLDPSK----AIVDKIPLPPR-----------------KKQSAT 347
+ +EL + E + +L P A+V + + KK
Sbjct: 485 NNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGC 544
Query: 348 NMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + + + +S +R + + L+ +MR+ GY+P T +V HD++E KE+
Sbjct: 545 SSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQL 604
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSERLA A+GL++T P L +IKNLR+CGDCH+AIK MSKI RE++VRD KRFHH
Sbjct: 605 LSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHH 664
Query: 464 FRDGKCSCGDYW 475
F+DG CSCGDYW
Sbjct: 665 FKDGACSCGDYW 676
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L +C L + G+ V + + + D+ + + ++ +Y KC A KVFD++R
Sbjct: 106 FTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMR 165
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA-----EAV 245
KR+ +W M++G+ GQ + ++ +MR+ G D+ + V ACA+ A
Sbjct: 166 KRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGAS 225
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
G+L M+ D I +++ + G +A E MP V W AL +
Sbjct: 226 VHGYLLRHAMQMDVVI------STSLVDMYAKNGLFDQARRVFELMPHRNDVS-WSALIS 278
Query: 306 FAQIHGDVELEDRAEELLG 324
+G+ A+E LG
Sbjct: 279 QLAQYGN------ADEALG 291
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ +C MG VH L A DV ++ L++MY K AR+VF+ +
Sbjct: 206 VIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELM 265
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN SW +IS A G + L LF M+ +G HP+ + AC+ +K G
Sbjct: 266 PHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLG 324
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 211/382 (55%), Gaps = 27/382 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+D+ + FS ++ C L S+ K+VH L + F DV N L++ Y K
Sbjct: 326 RDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKV 385
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR VFD++ RN+ SW+ +I+GY +G G + + +FE+M + G P+ TFL V +AC
Sbjct: 386 DDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSAC 445
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + + G+ F+ M D+ + P H+ +I++LG G L EA + + PF+PT +
Sbjct: 446 SISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANM 505
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPL 338
W AL ++HG++EL A E L ++P K + +
Sbjct: 506 WAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKR 565
Query: 339 PPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTR-YVLH 393
+ A + +E N+ + S D + + EK+ G L + + GYVP+ + ++L
Sbjct: 566 KGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLP 625
Query: 394 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGREL 453
D+DE +EK YHSE+LAIAYGL++T + PL+I+++ RIC DCH+ IK+++ I RE+
Sbjct: 626 DVDEN-EEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREI 684
Query: 454 IVRDNKRFHHFRDGKCSCGDYW 475
++RD RFHHFRDG CSCGDYW
Sbjct: 685 VIRDASRFHHFRDGSCSCGDYW 706
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
G F++++ + L+ I G+++H + +D+ ++ LI+MY KC + A V
Sbjct: 231 CGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCV 290
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS-AEA 244
FD++ + + W+ +I+GYA +G + L L+ +MR +G D TF ++ C+ A
Sbjct: 291 FDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASV 350
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ ++ +++N +G+ + A++ G + +A +RM + W AL
Sbjct: 351 ARAKQVHASLVRNGFGL--DVVANTALVDFYSKWGKVDDARHVFDRMSCRNIIS-WNAL 406
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 5/211 (2%)
Query: 103 LSLCKEGK-VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
L LCK+ + E E + GY + +L+++C LKSI KR+ + + F
Sbjct: 106 LVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEP 165
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D + N+++ M+ KC A ++FD++ RN SW +ISGY +G + LF MR
Sbjct: 166 DQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMR 225
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
+ TF + A A E + G L+ +K G+ I A+I + G
Sbjct: 226 EEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKA--GLGQDIFVSCALIDMYSKCGS 283
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L +A + MP + T+ W ++ +HG
Sbjct: 284 LEDAHCVFDEMP-DKTIVGWNSIIAGYALHG 313
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 209/368 (56%), Gaps = 26/368 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C N+ +++G+ VH + F + L I+MY KC + A+ +F+ + R
Sbjct: 315 SALLACSNIGFLKLGRSVHGFI-VRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDR 373
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L W+ MI+ A+G+G D L LF++M +TG PD TF + +A + + V+EG L+F
Sbjct: 374 DLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF 433
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M N + I P +HY+ ++ +L +G + EA + + M EPTV +W AL + +
Sbjct: 434 GRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKK 493
Query: 313 VELEDRAEELLGDLDPSK----AIVDKIPLPPRK----KQSATNMLEEKNRVSDYRSTDL 364
+EL + + + +L P A+V + +K +Q M + ++ S+
Sbjct: 494 LELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIE 553
Query: 365 YRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
RG K+ L+ +MR+ GY+P T +V HD++EE KE+ L YH
Sbjct: 554 IRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYH 613
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GL++T P L IIKNLR+CGDCH+AIK +SKI RE++VRD KRFHHF+DG
Sbjct: 614 SERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDG 673
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 674 VCSCRDYW 681
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 7/184 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ +C +++ MG VH L DV L++MY K +A +VF +
Sbjct: 211 VMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLM 270
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
RN SW MISG+A NGQ + L LF M+ +G PD + AC++ +K G
Sbjct: 271 VHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F + + D+ + G A I + G L A+ M + + +W A+
Sbjct: 331 SVHGFIVRRFDFNCILG----TAAIDMYSKCGSLASAQMLFN-MISDRDLILWNAMIACC 385
Query: 308 QIHG 311
HG
Sbjct: 386 GAHG 389
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L +C L + G+ V + + + DV + + L+ +Y + A KVF ++
Sbjct: 111 FTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+ +W M++G+ + GQ D + ++ +MR+ G D+ + V AC +A V+ G
Sbjct: 171 RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 216/398 (54%), Gaps = 28/398 (7%)
Query: 106 CKE-GKVREAIEYM--GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C E G+ EA+E Q SS+L +C +++ MGK +H + V D
Sbjct: 290 CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD 349
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L+ MY KC + L+R VFD +R++++ +W+ MI A +G G + L LF++M
Sbjct: 350 LTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLL 409
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
+ P+ TF V + C+ + V+EG F M D+ + P HY ++ + AG L
Sbjct: 410 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLN 469
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP-------------- 328
EA +F++ MP EPT W AL +++ +VEL + + L +++P
Sbjct: 470 EAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILV 529
Query: 329 -----SKAIVDKIPLPPR--KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG----LNG 377
S+A +I + R K + L+ N+V + D E +K+ L
Sbjct: 530 TAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVE 589
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+M+ AGY PDT YVL DID+E K ++L HSE+LA+A+G+++ + +R+ KNLRICGD
Sbjct: 590 KMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGD 649
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CHNAIK MSK+VG ++VRD+ RFHHF++G CSC D W
Sbjct: 650 CHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C LK ++ GK +H V ++ + + L+ +Y KC + R AR VFD +
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 242
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ SW+ +++ Y N + G LF +M + G D+ T+ V C +E
Sbjct: 243 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 302
Query: 252 FEIMK 256
F M+
Sbjct: 303 FRKMQ 307
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 104 SLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
+L G EAI+ Q+ VF + +C K VH+ +
Sbjct: 52 ALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMS 111
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + N LI YGKC AR+VFD L R++ SW + S Y G G+ +F +M
Sbjct: 112 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 171
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
+G P+ T + ACA + +K G
Sbjct: 172 WSGVKPNPMTVSSILPACAELKDLKSG 198
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 207/367 (56%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +L + GK +HE + + +V + LI+MY KC KVF+++R++N
Sbjct: 196 VLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKN 255
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W+++ISGYA NGQG L F +M PD+ TFL V AC V EG F
Sbjct: 256 VYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFM 315
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK +G+ P IEHY ++ +LG AG L EA E ++ M EP +W AL ++HG+
Sbjct: 316 SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
Query: 314 ELEDRAEELLGDLDPSK-----------------AIVDKI----PLPPRKKQSATNMLEE 352
+L + + L +L+P+ A V K+ L +K + +E
Sbjct: 376 KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEI 435
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
N V ++ +++ + E+E ++ L +++E GYV T L+DI++E KE ++ YHS
Sbjct: 436 NNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHS 495
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL+++P LRI+KNLRIC DCH K++S + R ++VRD RFHHF +G
Sbjct: 496 EKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGF 555
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 556 CSCRDYW 562
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++L + L +GK +H ++ F+ DV + L+ +Y C + A ++FD++
Sbjct: 92 FPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMP 151
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-- 248
+RN +W+ +I+GY N + + F M G P + T +VV +AC+ A +G
Sbjct: 152 ERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKW 211
Query: 249 ---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
F+Y ++ + G A+I + G + E E+ E + E V W L +
Sbjct: 212 IHEFIYHNRLR--LNVFVG----TALIDMYAKCGAVYEVEKVFEEIR-EKNVYTWNVLIS 264
Query: 306 FAQIH--GDVELEDRAEELLGDLDPSKA 331
++ GD L+ + L+ + P +
Sbjct: 265 GYAMNGQGDAALQAFSRMLMENFKPDEV 292
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 202/371 (54%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L +C L ++++G +H ++ + + LI+MY KC + A +VF +
Sbjct: 368 LASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE 427
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ W MI+G A +G G + LF +M++T P+ TF + AC+ + V EG L
Sbjct: 428 RRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRL 487
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M+ YG+VPG +HY ++ +LG AG L EA E +E+MP P+ VW AL +I+
Sbjct: 488 FFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIY 547
Query: 311 GDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNM 349
G+VEL + A L G D + + + +K+ +
Sbjct: 548 GNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSS 607
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE-AKEKAL 404
+E + ++ D L Y K+ + +++ GYV D ++L ++EE KE AL
Sbjct: 608 IEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHAL 667
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIAYGLI P P+RI+KNLR+CGDCH+ K++SK+ R++++RD RFHHF
Sbjct: 668 NLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHF 727
Query: 465 RDGKCSCGDYW 475
G CSC DYW
Sbjct: 728 SGGNCSCMDYW 738
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ + + S+ G+ +H ++ ++F D+ ++N LI Y + A VF ++
Sbjct: 134 FPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIV 193
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ SW+ MISG+ G + L LF++M+ P++ T + V +ACA K L
Sbjct: 194 EKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACA-----KRIDL 248
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
F DY GI+ + A++ + G L +A ++M + V + +
Sbjct: 249 EFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGY 308
Query: 307 AQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML 350
A++ GD D ++ + D + PR+ +A N L
Sbjct: 309 AKV--------------GDYDAARRVFDVM---PREDITAWNAL 335
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++LD S+E +R+ + + KD+ +I+ Y K + AR+VFD + +
Sbjct: 271 NAMLDMYVKCGSLEDARRLFDKMEE----KDIVSWTTMIDGYAKVGDYDAARRVFDVMPR 326
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAVK-EGF 249
++++W+ +IS Y NG+ + L +F +++ P++ T AACA A+ G+
Sbjct: 327 EDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGW 386
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF---VERMPFEPTVEVWEALRNF 306
++ I K GI ++I + GHL +A E VER V VW A+
Sbjct: 387 IHVYIKKQ--GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR----DVFVWSAMIAG 440
Query: 307 AQIHG 311
+HG
Sbjct: 441 LAMHG 445
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 134 LLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLR 190
L+D C N K + K++H +LRT F D KL + L A KVFDQ+
Sbjct: 36 LIDKCANKKHL---KQLHAHMLRTGLFF-DPPSATKLFTACALSSPSSLDYACKVFDQIP 91
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG- 248
+ NL +W+ +I +A++ + GL++F QM ++ P+ TF V A ++ G
Sbjct: 92 RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQ 151
Query: 249 FLYFEIMKNDYG 260
++ +MK +G
Sbjct: 152 AIHGMVMKASFG 163
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 214/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS++ +C L ++ GK+V+ LL S F ++ + + LI+MY KC + KVF +
Sbjct: 268 LMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV 327
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KRN+ W+ MISG + + + + ++LFE+M++ G P+ TF+ V +AC VK+G
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQ 387
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++M ++ + P + HY ++ L AG + EA + + ++PF + +W +L +
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATN 348
HG++EL + A + L D++P + D++ + KK+ +
Sbjct: 448 HGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKS 507
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + R+ Y K+ + ++++ GY +T++ LH + E K++ L
Sbjct: 508 WIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELL 567
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
++HSE+LA GL+ PP P+RI+KNLRICGDCH+ +K+ SK R++IVRD RFHHF
Sbjct: 568 RHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHF 627
Query: 465 RDGKCSCGDYW 475
++G CSCGD+W
Sbjct: 628 KNGCCSCGDFW 638
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L C K + GK H + D+ +N LI MY KC + AR+VFD++ R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L SW+ MI NG+ + L L QM++ G + T V ACA+ A+ E L
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL-- 187
Query: 254 IMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + I ++ + A++ V G + +A E MP + +V W ++
Sbjct: 188 ---HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHE 152
L S + + SL + G+ EA++ + Q + F SS+L +C ++ + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+A +V + L+++Y KC + A VF+ + R++ +W M +GY N
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L LF + +TG D+ V ACA A+ EG
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG 285
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 215/369 (58%), Gaps = 28/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L +C ++ +++GK +H +LR F L +++MY KC + ARK+F++L
Sbjct: 318 SALLACADVGFLKLGKSIHGFILRRLEF--QCILGTAVLDMYSKCGSLESARKLFNKLSS 375
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+L W+ MI+ +G G D L LF+++ +TG PD TF + +A + + V+EG +
Sbjct: 376 RDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 435
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M ++GI P +H + ++ +L +G + EA E + M EPT+ +W AL + +
Sbjct: 436 FDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNK 495
Query: 312 DVEL---------EDRAEE-----LLGDLDPSKAIVDKIPLPPR-------KKQSATNML 350
+EL E + E+ L+ +L + DK+ + KK +++
Sbjct: 496 KLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 555
Query: 351 EEKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + D +++++ L+ +MR+ GYVP T +V HD+DE+ KE+ L Y
Sbjct: 556 EVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSY 615
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAIA+GL++T P L IIKNLR+CGDCH+AIK +SKIV RE++VRD KRFHHF+D
Sbjct: 616 HSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKD 675
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 676 GACSCGDYW 684
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 7/184 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ +C + MG VH DV + L++MY K + +AR+VF +
Sbjct: 214 VMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMM 273
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
RN SW+ +ISG+A NG + L LF +M +G PD + ACA +K G
Sbjct: 274 PYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGK 333
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F + + ++ + G A++ + G L A + ++ V +W A+
Sbjct: 334 SIHGFILRRLEFQCILG----TAVLDMYSKCGSLESARKLFNKLSSRDLV-LWNAMIACC 388
Query: 308 QIHG 311
HG
Sbjct: 389 GTHG 392
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
+SA F+ L +C L ++ + V + + +DV + + L+ +Y +C
Sbjct: 105 SSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGD 164
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +VFD + +++ +W M++G+ + G+ + L ++ +MR+ G D+ + V AC
Sbjct: 165 AIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTL 224
Query: 242 AEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+ G ++ ++ +G+ + +++ + GH A + MP+ V W
Sbjct: 225 TGNTRMGASVHGRFLR--HGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVS-W 281
Query: 301 EAL-RNFAQ-IHGDVELEDRAEELLGDLDP-SKAIVDKI 336
AL FAQ H D L+ E L P S A+V +
Sbjct: 282 NALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 207/370 (55%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +I++G+ +H + R L LI+MY KC + A +VF+ +
Sbjct: 301 SILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSML 360
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++L +W+ MI G+A +G+ +F +MRK PD TF+ + +AC+ A + G
Sbjct: 361 HKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRH 420
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M ++Y I P +EHY +I +LG +G EAEE + M EP +W +L ++H
Sbjct: 421 IFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMH 480
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPP-----------------RKKQSATNM 349
G+VEL ++ + L ++P S ++ I KK +
Sbjct: 481 GNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSS 540
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D + ++ G+ +M +EAG+VPDT VL +++EE KE AL+
Sbjct: 541 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALR 600
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHHFR
Sbjct: 601 HHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFR 660
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 661 DGVCSCNDYW 670
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D +++ + SIE+G++VH + F ++++
Sbjct: 174 GNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIV 233
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI+ Y KC A +F L +++ SW+++I GY + L+LF++M ++G
Sbjct: 234 NALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGES 293
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T L + ACA A+ G +++ I K G+ ++I + G + A
Sbjct: 294 PNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAH 353
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
+ M ++ W A+ +HG
Sbjct: 354 QVFNSM-LHKSLPAWNAMIFGFAMHG 378
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 35/151 (23%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--------- 181
F LL SC LK+ + G ++H + + D+ ++ LI MY + N RL
Sbjct: 66 FPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQ--NERLEDAHKVFDR 123
Query: 182 ------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
AR +FD++ +++ SW+ MISGY G + L LF
Sbjct: 124 SSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELF 183
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++M KT PD+ T + V +A A + +++ G
Sbjct: 184 KEMMKTNVRPDESTMVTVISASARSGSIELG 214
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF+ +++ NL W+ M G+A + L L+ M G P+ TF + +CA
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 242 AEAVKEGF 249
+A KEG
Sbjct: 76 LKASKEGL 83
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 211/372 (56%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ-L 189
+ +L +C ++E GK +H + S V +NN L++ Y KC N +A+ VF++ +
Sbjct: 272 LTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIM 331
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN+ SW M++ A +G G + + +F +M ++G PD+ F+ + AC+ A V++G
Sbjct: 332 NERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGC 391
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ MK Y I P IEHY ++ + G AG L +A EFV +MP T +W L +
Sbjct: 392 EYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSM 451
Query: 310 HGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPRKKQSAT----------N 348
HGDV+L ++ +E L +LDP+ A+ K ++S T +
Sbjct: 452 HGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWS 511
Query: 349 MLE-EKNRVSDYRSTDLYR---GEYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKA 403
M+E +K + T Y+ Y+K+K + ++R E GYVP+ VLHDI+EE KE +
Sbjct: 512 MIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGS 571
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LA+A+G+ +RI+KNLRIC DCH +K++S+I E++VRD RFH
Sbjct: 572 VSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHS 631
Query: 464 FRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 632 FKDGYCSCRDYW 643
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++++ +C ++ G+ + +L+ V+++ N ++ Y K LAR++F ++
Sbjct: 175 WNAMVTACCRGGDMKGGRELFDLMP----VRNLMSWNVMLAGYTKAGELELAREMFLEMP 230
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ SW MI G+A NG + F ++++ G P++ + V +ACA A A++ G
Sbjct: 231 MKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKI 290
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ I K+ + + + A++ G+++ A+ ER+ E + W ++ +
Sbjct: 291 LHGFIEKSGLAWIVSVNN--ALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAM 348
Query: 310 HGDVE 314
HG E
Sbjct: 349 HGHGE 353
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 197/368 (53%), Gaps = 45/368 (12%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL C ++++GK H + DV L LI MY KC + +AR +F++ +R
Sbjct: 398 SLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQR 457
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ M++G++ +G G + L LF +M G P+ TF+ +F AC+ +
Sbjct: 458 DIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHS---------- 507
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
G+ +EHY ++ +LG AGHL EA +E MP P +W AL ++H +
Sbjct: 508 -------GL---MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKN 557
Query: 313 VELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNMLE 351
+ L + A + +LDP ++ + + KK+ + +E
Sbjct: 558 LALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIE 617
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++S D + YE + + ++RE+GY P+T VL +IDEE KE AL YH
Sbjct: 618 VSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYH 677
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA A+GLIST P P+RI+KNLRIC DCH A K++SKI GR +IVRD RFHHF +G
Sbjct: 678 SEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEG 737
Query: 468 KCSCGDYW 475
CSC YW
Sbjct: 738 YCSCMGYW 745
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ CG + ++++GK H L + F + L LI+MYGKC AR +F+ ++K+
Sbjct: 297 SLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKK 356
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W ++IS YA LF +M P+ T + + + CA A A+ G +
Sbjct: 357 DVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLG-KWT 415
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE-FVERMPFEPTVEVWEALRNFAQIHG 311
N +G+ + A+I + G + A F E M + + +W + +HG
Sbjct: 416 HAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAM--QRDIRMWNTMMAGFSMHG 473
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
DA+A + + SLL +C S ++G+ +H + + F DV + N L+ MY KC
Sbjct: 81 NDAAALDNF-ILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCL 139
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR VFDQ+ +R++ SW M+ Y + + L L +M+ G + + A
Sbjct: 140 VSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVF 199
Query: 240 ASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
+ +K G ++ I++N + A+I + G L A+ +R+ + +V
Sbjct: 200 GNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLS-KRSVV 258
Query: 299 VWEAL 303
W +
Sbjct: 259 SWTVM 263
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVK-DVELNNK 168
VRE ++++G S A SL+ GNL ++ G+ VH ++R K +V +
Sbjct: 177 VRE-MQFVGVKLSGVA----LISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTA 231
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI+MY K A+++FD+L KR++ SW +MI+G + + +G F +M + P+
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPN 291
Query: 229 KETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ T L + C + G + + +++N +G+ + A+I + G G + A
Sbjct: 292 EITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLAL--VTALIDMYGKCGQVGYARAL 349
Query: 288 VERMPFEPTVEVWEAL 303
+ + V++W L
Sbjct: 350 FNGVK-KKDVKIWSVL 364
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 205/363 (56%), Gaps = 25/363 (6%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
++ Y +D+ FS ++ C L S+E K+ H L F D+ N L+++Y
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLY 378
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
K A+ VFD + +N+ SW+ +I+GY +G+G + + +FE+M G P+ TFL
Sbjct: 379 SKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFL 438
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
V +AC+ + G+ FE M D+ I P HY +I++LG G L EA ++ PF
Sbjct: 439 AVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPF 498
Query: 294 EPTVEVWEALRNFAQIHGDVEL-EDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
+PTV +W AL ++H + EL + AE+L G + P K + +L
Sbjct: 499 KPTVNMWAALLTACRVHKNFELGKFAAEKLYG-------------MGPEKLSNYVVLLNI 545
Query: 353 KNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLA 412
NR G E+ L ++ + GYVP +++L D+DE+ +E+ L YHSE+LA
Sbjct: 546 YNR----------SGRLEEAAALMLEISKHGYVPQDKFLLPDVDEQ-EERVLLYHSEKLA 594
Query: 413 IAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCG 472
IA+GLI+T PL+I+++ RICGDCH+AIK+++ + RE++VRD RFHHF+DG CSCG
Sbjct: 595 IAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCG 654
Query: 473 DYW 475
DYW
Sbjct: 655 DYW 657
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 113 EAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEM 172
E E + + + + + +L+ +C LKSI K+V + S D L N+++ M
Sbjct: 116 ELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLM 175
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ KC AR++FD++ ++N+ SW+ +I G G + LF M + F
Sbjct: 176 HVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMF 235
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ + A A + G L+ +K G+ + A+I + G + +A+ ++M
Sbjct: 236 VTMIRASAGLGLIFAGRQLHSCSLKT--GVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293
Query: 292 PFEPTVEVWEALRNFAQIHG 311
P E T W ++ +HG
Sbjct: 294 P-EKTTVGWNSIIAGYALHG 312
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 209/395 (52%), Gaps = 28/395 (7%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G + EA+ G+ +A D +L + L S+ GK +H L F + +
Sbjct: 7 GLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVV 66
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
+ L++MY C + A KVFD+ + +++ W MI+ +G G + +F++M +TG
Sbjct: 67 SSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVS 126
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD +FL + AC+ ++ V EG Y ++M + Y + P EHY ++ +LG +G EA +
Sbjct: 127 PDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYK 186
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS----------------- 329
F++ MP EP VW AL +IH + EL A + L +L+P
Sbjct: 187 FIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGK 246
Query: 330 ----KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMRE 381
K I K+ +K A + +E N V + + D + + K+ + ++R
Sbjct: 247 WNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRR 306
Query: 382 AG-YVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
G YV DT +VLHD+ EE K L HSERLAI++GLIST PLRI KNLR+CGDCH
Sbjct: 307 EGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHE 366
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SK+ RE++VRD RFHHF G CSCGD+W
Sbjct: 367 FTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 401
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 197/367 (53%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+ +C L ++E+G L+ F+ + L LI+ Y KC + A++VF +R+++
Sbjct: 310 VFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKD 369
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
++ +ISG A G +F QM K G PD TF+ + C A V +G YF
Sbjct: 370 CVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFS 429
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M + + + P IEHY ++ + AG L+EA++ + MP E VW AL ++H D
Sbjct: 430 GMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDT 489
Query: 314 ELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNMLEE 352
+L + + L +L+P ++ I + +K + +E
Sbjct: 490 QLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEV 549
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V ++ D L YEK++ L +REAGY P T +VL D++EE KE L HS
Sbjct: 550 DGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHS 609
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+ LIST + +R++KNLR+CGDCH AIK++SK+ GRE+IVRDN RFHHF +G
Sbjct: 610 EKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGS 669
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 670 CSCRDYW 676
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C + + G+ + +R S V +V + L++MY KC + AR+VFD + +++
Sbjct: 209 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKD 268
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W +I GYA+NG + L +F +M++ PD + VF+AC+ A++ G
Sbjct: 269 VVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARG 328
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+M D + + A+I G + +A+E + M
Sbjct: 329 LMDGDEFLSNPVLG-TALIDFYAKCGSVAQAKEVFKGM 365
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 131 FSSLLDSCGNL-KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F +L +C L +G +H L+ + F DV + L+ +Y K ARKVFD++
Sbjct: 104 FPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEI 163
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++N+ SW +I GY +G + L LF + + G PD T + + AC+ + G
Sbjct: 164 PEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASG- 222
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + + G V + +++ + G + EA + M E V W AL
Sbjct: 223 RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGM-VEKDVVCWSAL 275
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 34/272 (12%)
Query: 140 NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHL 199
LKS+ K+ H LL +D L N L+ T+ A VF Q N+ ++
Sbjct: 12 GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY 259
+I G +N D + ++ MR+ G PD TF V AC YF + + +
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPH------YFHVGLSLH 125
Query: 260 GIV--PGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+V G + + ++ + G L +A + + +P E V W A+ I G +
Sbjct: 126 SLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAI-----ICGYI 179
Query: 314 ELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMK 373
E E L + +++ + L P + +L +RV D S +
Sbjct: 180 ESGCFGEA----LGLFRGLLE-MGLRP-DSFTLVRILYACSRVGDLASG----------R 223
Query: 374 GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++G MRE+G V + +D AK +++
Sbjct: 224 WIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 208/373 (55%), Gaps = 33/373 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +I++G+ +H + R + L LI+MY KC + A +VF+ +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++LSSW+ MI G+A +G+ +F +MRK G PD TF+ + +AC+ + + G
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRH 491
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M DY I P +EHY +I +LG +G EAEE + M EP +W +L +I
Sbjct: 492 IFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIR 551
Query: 311 GDVELEDRAEELLGDLDPS------------------------KAIVDKIPLPPRKKQSA 346
G+VEL + + L ++P +A+++ + KK
Sbjct: 552 GNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGM---KKVPG 608
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMR----EAGYVPDTRYVLHDIDEEAKEK 402
+ +E + V ++ D + ++ G+ +M +AG+VPDT VL +++EE KE
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
AL++HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 463 HFRDGKCSCGDYW 475
HFRDG CSC DYW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D +++ +C SIE+G++VH + F ++++
Sbjct: 245 GNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIV 304
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+++Y KC A +F+ L +++ SW+ +I GY + L+LF++M ++G
Sbjct: 305 NSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGER 364
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T L + ACA A+ G +++ I K ++I + G IEA
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGD-IEAA 423
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
V ++ W A+ +HG
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHG 449
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 37/207 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-------- 181
F LL SC K+ + G+++H + + D+ ++ LI +Y + N RL
Sbjct: 136 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQ--NGRLEDARKVFD 193
Query: 182 -------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
A+K+FD++ +++ SW+ MISGYA G + L L
Sbjct: 194 RSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F++M KT PD+ T + V +ACA + +++ G + +D+G ++ +++ +
Sbjct: 254 FKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWI-DDHGFGSNLKIVNSLMDLYS 312
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEAL 303
G L A E + ++ + W L
Sbjct: 313 KCGELETACGLFEGLLYKDVIS-WNTL 338
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 123/281 (43%), Gaps = 43/281 (15%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCC------NTRLARKV 185
SLL +C L+S+ + +H ++++T + L+ KL+E+ C A V
Sbjct: 38 SLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALS-KLLEL---CVISPHFDGLPYAISV 90
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ +++ NL W+ M G+A + L L+ M G P+ TF + +CA ++A
Sbjct: 91 FETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAF 150
Query: 246 KEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
KEG ++ ++K Y + + + ++I V G L +A + +R P V ++
Sbjct: 151 KEGQQIHGHVLKLGYDL--DLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIK 208
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDL 364
+A G ++ ++ + D+IP+ +++ +S Y T
Sbjct: 209 GYAS--------------RGYIESAQKLFDEIPV--------KDVVSWNAMISGYAET-- 244
Query: 365 YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
G Y++ L +M + PD ++ + A+ +++
Sbjct: 245 --GNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIE 283
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 210/375 (56%), Gaps = 34/375 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
+++L +L S++ GK++H + V V + N LI MY + + + ARK+F+ +
Sbjct: 415 LAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHIC 474
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ +W MI A +G G + + LFE+M + PD T++ V +AC V++G
Sbjct: 475 SYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK 534
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF +MKN + I P HY +I +LG AG L EA F+ MP EP V W +L + ++
Sbjct: 535 SYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRV 594
Query: 310 HGDVELEDRAEELLGDLDPS-------------------------KAIVDKIPLPPRKKQ 344
H V+L A E L +DP+ K++ DK KK+
Sbjct: 595 HKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDK----AVKKE 650
Query: 345 SATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ ++ KN+V + D + Y + + ++++ G++PDT VLHD+++E K
Sbjct: 651 QGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVK 710
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+ L++HSE+LAIA+ LI+TP +RI+KNLR+C DCH+AI+ +S +V RE+IVRD R
Sbjct: 711 EQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATR 770
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+DG CSC DYW
Sbjct: 771 FHHFKDGSCSCQDYW 785
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L SC +++++GK+VH + V + N L+ MY KC ++ +A+ VFD++R
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 191 KRNLS-------------------------------SWHLMISGYAANGQGADGLMLFEQ 219
++ S SW+ +I+GY G L F
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 220 MRKTGP-HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
M K+ PDK T V +ACA+ E++K G ++ I++ D I + + A+I +
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN--ALISMYAK 325
Query: 278 AGHLIEAEEFVE--RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK 335
+G + A VE P + L + +I GD+DP++AI D
Sbjct: 326 SGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKI--------------GDIDPARAIFDS 371
Query: 336 I 336
+
Sbjct: 372 L 372
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 106 CKEG---KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHE---------- 152
C +G + E +M + +S S+L +C N +S+++GK++H
Sbjct: 253 CHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIA 312
Query: 153 ------LLRTSAFVKDVELNNKLIEMYG-----------------KCCNTRLARKVFDQL 189
L+ A VE+ ++++E+ G K + AR +FD L
Sbjct: 313 GAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSL 372
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ R++ +W MI GYA NG +D L+LF M + GP P+ T V + +S ++ G
Sbjct: 373 KHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHG 431
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ + K N AR+VFD++ + + SW MI GY G + F +M +G
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 227 PDKETFLVVFAACASAEAVKEG--FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P + TF V A+CA+A+A+ G F + G+VP +++ + G + A
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN---SLLNMYAKCGDSVMA 199
Query: 285 EEFVERMPFEPTVEVWEAL 303
+ +RM + T W +
Sbjct: 200 KVVFDRMRLKDT-STWNTM 217
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 213/394 (54%), Gaps = 35/394 (8%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ EA+ + ++ D F+ SLL + L ++E+G+RVH L ++ +
Sbjct: 210 GRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVT 269
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+++Y KC +++ +RN SW +I G A NG G + L LF +M G
Sbjct: 270 NSLLDLYAKC------DAIWEX--ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLV 321
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P + TF+ V AC+ + EGF YF MK ++GI+P IEHY ++ +L AG + +A E
Sbjct: 322 PSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYE 381
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------SKAI 332
+++ MP +P W L IHG + L + A L L+P S+
Sbjct: 382 YIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECR 441
Query: 333 VDKIPLPPR-------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMRE 381
+ L R KK S +++E NRV ++ RS + Y ++ + ++
Sbjct: 442 WADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKL 501
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GYVP T VL DI+EE KE+AL YHSE+ AIA+ ++T P +R++KNLR+C DCH A
Sbjct: 502 EGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMA 561
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK+M+K+ RE+++RD RFHHFR G CSC DYW
Sbjct: 562 IKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ LL + ++ G+ +H + + F V + N L+ +Y C +T A VF+ +R
Sbjct: 133 YPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMR 192
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+L + +I+G+A NG+ ++ L LF +M G PD T + + +A A A++ G
Sbjct: 193 DRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELG 250
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF + N+ +W+ M GYA + + L + QM + PD T+ + A +
Sbjct: 83 AYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISK 142
Query: 242 AEAVKEG 248
+ V+EG
Sbjct: 143 SLNVREG 149
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 206/370 (55%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +IE+G+ +H + R LI+MY KC + A++VFD +
Sbjct: 326 SILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSIL 385
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+LSSW+ MI G+A +G+ +F +MRK PD TF+ + +AC+ + + G
Sbjct: 386 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 445
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F MK DY I P +EHY +I +LG +G EAEE + M EP +W +L ++H
Sbjct: 446 IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMH 505
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPP-----------------RKKQSATNM 349
G+VEL + + L ++P S ++ I KK +
Sbjct: 506 GNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSS 565
Query: 350 LEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D + R Y ++ + + EAG+VPDT VL +++EE KE AL+
Sbjct: 566 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALR 625
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHHFR
Sbjct: 626 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFR 685
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 686 DGVCSCNDYW 695
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 4/206 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D S++ +C SIE+G++VH + F ++++
Sbjct: 199 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 258
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI++Y KC A +F+ L +++ SW+ +I GY + L+LF++M ++G
Sbjct: 259 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T L + ACA A++ G +++ I K G+ H ++I + G IEA
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGD-IEAA 377
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
+ V ++ W A+ +HG
Sbjct: 378 QQVFDSILNRSLSSWNAMIFGFAMHG 403
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
F LL SC K+ G+++H + + D+ ++ LI MY + N RL ARKVFD
Sbjct: 90 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQ--NGRLEDARKVFD 147
Query: 188 QLRKRNLSS-------------------------------WHLMISGYAANGQGADGLML 216
Q R++ S W+ MISGYA G + L L
Sbjct: 148 QSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALEL 207
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F++M KT PD+ T + V +ACA + +++ G + +D+G ++ A+I +
Sbjct: 208 FKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI-DDHGFGSNLKIVNALIDLYI 266
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A E + ++ + W L
Sbjct: 267 KCGEVETACGLFEGLSYKDVIS-WNTL 292
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF+ +++ NL W+ M G+A + L L+ M G P+ TF + +CA
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 242 AEAVKEG 248
++A +EG
Sbjct: 101 SKAFREG 107
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 220/413 (53%), Gaps = 31/413 (7%)
Query: 94 QLESLDVNLLSLC--KEGKVREAIEYMGQDASASAGYD----VFSSLLDSCGNLKSIEMG 147
Q +++ N+L C + R+A+ S + G++ LL +C NL ++E G
Sbjct: 231 QWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFG 290
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+RVH + + + L N LI MY +C A +F ++ +RN+ SW MISG+A +
Sbjct: 291 ERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMH 350
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEH 267
G G + + FEQM++ G PD +T V +AC+ V +G ++F+ M +GI P I H
Sbjct: 351 GYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHH 410
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDR--------- 318
Y ++ +LG AG L +A + + M +P +W L +IH L +R
Sbjct: 411 YGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELK 470
Query: 319 AEE-----LLGDLDPSKAIVDKIP-----LPPRKKQSA--TNMLEEKNRVSDYRSTDLYR 366
A+E LL ++ S DK+ + + Q++ + +E K +V ++ D+
Sbjct: 471 AQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILH 530
Query: 367 GE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
YE + + Q++ AGYV + LH++ E K L YHSE+LAIA+G+++TPP
Sbjct: 531 PRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPP 590
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+R+ KNLRIC DCHN K++S RE+++RD RFHHFR+G+CSC YW
Sbjct: 591 GTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S ++ SC + S+ G ++H + D L L+++Y C A KVFD++ +
Sbjct: 172 SFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQ 231
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKT--GPHPDKETFLVVFAACASAEAVKEGF 249
+ SW+++IS N + D L +F+ M+ T G PD T L++ ACA+ A++ G
Sbjct: 232 WDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGE 291
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ ++G + ++I + G L +A +RM E V W A+ + +
Sbjct: 292 RVHNYIE-EHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMD-ERNVVSWSAMISGFAM 349
Query: 310 HG 311
HG
Sbjct: 350 HG 351
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 209/375 (55%), Gaps = 30/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAF---VKDVELNNKLIEMYGKCCNTRLARKVF 186
V S+L +C +L ++E G+ VH L T +F ++ L L++MY KC A +VF
Sbjct: 213 VLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVF 272
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + +R++ W+ MI G A NG G L LF +M + G P++ TF+ V AC V
Sbjct: 273 DGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVD 332
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
EG F+ M+ DYGI P EHY + +LG AG++ EAE + MP EP W AL +
Sbjct: 333 EGKRVFKSMQ-DYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSS 391
Query: 307 AQIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQS 345
Q+H D+ + +R + L +L+P ++ I + KK++
Sbjct: 392 CQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKET 451
Query: 346 ATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAK 400
+ +E V ++ S D L R Y ++ + +++ GYV DT V+ D+D EE K
Sbjct: 452 GLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDK 511
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
AL YHSERLA+A+G+++ P +P+RI+KNLR+C DCH K++SK+ RE+IVRD R
Sbjct: 512 GIALSYHSERLALAFGILNIPQGVPIRIVKNLRVCRDCHVHSKLVSKLYEREIIVRDRHR 571
Query: 461 FHHFRDGKCSCGDYW 475
FH FRDG CSC DYW
Sbjct: 572 FHVFRDGVCSCNDYW 586
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +SLL +L ++ +RV L + DV N ++ YGK + AR+VF ++
Sbjct: 115 VTNSLLKLYCSLGLLDRARRV---LYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARM 171
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RNL SW M+ G+ + L +F++M + PD + V ACA AV+ G
Sbjct: 172 PERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERG 230
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 204/367 (55%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L SC + +++ G+RVH L + F ++ + + +I+MY C N A++ F + +++
Sbjct: 331 ILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKD 390
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ MI+G NG G D + LF QM+ +G PD+ TF+ V AC+ A V EG F
Sbjct: 391 VVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFY 450
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M ++P ++HY +I +LG AG L A F+ MPF+P +V+ L +IHG++
Sbjct: 451 HMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNI 510
Query: 314 ELEDRAEELLGDLDPSKA-----IVDKIPLPPR----------------KKQSATNMLEE 352
+L + + +++P+ A + + L KK + +E
Sbjct: 511 KLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEI 570
Query: 353 KNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+ + + + +Y K +KGL ++++AGYVP+T +L D+ ++ K+ L +HS
Sbjct: 571 NQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHS 630
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E++AIA+GL+ T P +RI KNLR C DCH A K +SK+ GR L+++D RFH F+DG
Sbjct: 631 EKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGV 690
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 691 CSCRDYW 697
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L + NL I + K VH F +V + L++MY K +AR++F+ + +
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE 185
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ +W+ ++SGY+ +G + + LF MR+ G D T + + A S ++ G
Sbjct: 186 RNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 10/178 (5%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
LK ++ +++H + TS + L+N L+ Y C A+++F +N+ SW ++
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
ISG A N + + +F +M P+ T V A A+ G + + +
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANL-----GLIRIAKSVHCFW 148
Query: 261 IVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G E + A++ + G + A + E M E V W A+ + HG E
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGYSDHGFSE 205
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ + ++ +++G +H + + + D + L+++Y A +VF ++ +
Sbjct: 228 SLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVK 287
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEG-FL 250
++++W LM++G+++ + F +M D + + ++C+ + A+++G +
Sbjct: 288 DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRV 347
Query: 251 YFEIMKNDYG--IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +K + I G A+I + + G+L +A+ F M E V W A+
Sbjct: 348 HALAIKTCFANNIFVG----SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAM 397
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 227/412 (55%), Gaps = 28/412 (6%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKR 149
N + S +V + + G +EAIE Q Y S+L + L +IE+GK
Sbjct: 218 NKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKW 277
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYAANG 208
VH + D L + LI+MY KC + A +VF+ +R K+N +W +I G A +G
Sbjct: 278 VHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHG 337
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+ D L F +M++ G P ++ V +AC+ A V+EG + M N G++P IEHY
Sbjct: 338 RARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHY 397
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
++ +LG AG L EAE+ + MP +P + +AL ++HG++E+ +R ++L P
Sbjct: 398 GCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYP 457
Query: 329 SKAI-----------------VDKIPLPPR----KKQSATNMLEEKNRVSDYRSTD---- 363
+ V K+ L + +K + +E + ++ D
Sbjct: 458 HDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHP 517
Query: 364 LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPR 423
G + ++ ++ ++R GY P+T VL ++DE+ K+ AL YHSE++AIA+GLIST P+
Sbjct: 518 RAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQ 577
Query: 424 MPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
PL+I+KNLR+C DCH++IK++SKI R++IVRD KRFHHF +G CSC DYW
Sbjct: 578 TPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 53/246 (21%)
Query: 117 YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD-------------- 162
+M D F +L +C L IE GK++H + V D
Sbjct: 112 HMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMC 171
Query: 163 ------------------VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
V L N +I+ Y + + R +R++FD + +++ SW++MISG
Sbjct: 172 GAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGC 231
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVP 263
A NG + + +F M+ P+ T + V A + A++ G +++ KN+
Sbjct: 232 AQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNE----- 286
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN------FAQIHGDVELED 317
I I VLGSA LI+ + + + V+V+E +RN ++ I G + +
Sbjct: 287 -----IEIDDVLGSA--LIDM--YSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHG 337
Query: 318 RAEELL 323
RA + L
Sbjct: 338 RARDAL 343
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAA-------NGQGADGLMLFEQMRKTG-PHPDKET 231
+ ARK F Q+ N SW+ +I A + + L+ F M G P+K T
Sbjct: 66 KYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFT 125
Query: 232 FLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI----EHYIA--IIKVLGSAGHLIEAE 285
F V ACA ++EG K +G V + + ++ +++V G + +A
Sbjct: 126 FPCVLKACAKLARIEEG-------KQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAH 178
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELED-RAEELLGDLDPSKAIV 333
+ E V +W + I G V + D RA L D P+K++V
Sbjct: 179 VLFYQTRLEGNVVLWNVM-----IDGYVRMGDLRASRELFDSMPNKSVV 222
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 210/397 (52%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G + EA+ G+ +A D +L + L S+ GK +H L F +
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGA 602
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ + L++MY C + A KVFD+ + +++ W MI+ +G G + +F++M +TG
Sbjct: 603 VVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETG 662
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD +FL + AC+ ++ V EG Y ++M + Y + P EHY ++ +LG +G EA
Sbjct: 663 VSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEA 722
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS--------------- 329
+F++ MP EP VW AL +IH + EL A + L +L+P
Sbjct: 723 YKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEM 782
Query: 330 ------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQM 379
K I K+ +K A + +E N V + + D + + K+ + ++
Sbjct: 783 GKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKL 842
Query: 380 REAG-YVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
R G YV DT +VLHD+ EE K L HSERLAI++GLIST PLRI KNLR+CGDC
Sbjct: 843 RREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDC 902
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H K++SK+ RE++VRD RFHHF G CSCGD+W
Sbjct: 903 HEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L++C LKSI + K+VH + + D+ L N++I++YG+C A +F+ L
Sbjct: 468 MMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEML 526
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K+++ +W M++ +A NG + + LF +M G PD + + A A ++ +G
Sbjct: 527 DKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 113 EAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EAI++ G+ D SLL + G+L + G+ VH D+++ N L+
Sbjct: 348 EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC + + +VFD++R ++ SW +I+ YA + + ++ + F +K G D
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA---IIKVLGSAGHLIEAEEF 287
+ AC+ +++ L ++ + Y I G+ I II + G G + A
Sbjct: 468 MMGSILEACSGLKSIS---LLKQV--HSYAIRNGLLDLILKNRIIDIYGECGEVCYALNI 522
Query: 288 VERMPFEPTVEVWEALRN-FAQ 308
E + + V W ++ N FA+
Sbjct: 523 FEMLDKKDIV-TWTSMVNCFAE 543
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDAS---ASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S +L LCK+G +REA+ + ++ A D + +LD +++ G+++H
Sbjct: 21 SAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAH 80
Query: 154 LRTSAFVKDVE---LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQG 210
+ + D + L KL+ MYGKC A ++FD + R + SW+ +I ++G
Sbjct: 81 AVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGA 140
Query: 211 ADGLMLFEQMRKT----GPHPDKETFLVVFAACAS 241
+ + ++ MR + G PD T V AC +
Sbjct: 141 GEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGA 175
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +CG G VH L S + + N L+ MY KC A +VF+ +R
Sbjct: 166 LASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMR 225
Query: 191 K-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+++SW+ ISG NG + L LF +M+ G + T + V CA + G
Sbjct: 226 DGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L C L + G+ +H L +++ N L+ MY +C A +VF ++ ++
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKD 329
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
SW+ M+S Y N A+ + F +M + G +PD + + +A
Sbjct: 330 YISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSA 374
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 204/373 (54%), Gaps = 33/373 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C + ++ MG+RV ++ + + LI+MY KC + ARKVFD + +
Sbjct: 202 SVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNK 261
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W MISG A +G + + LF+QM G PD+ T V +AC +A EGF YF
Sbjct: 262 DVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYF 321
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M YGI P I+HY ++ +L GHL EAEEF+ +MP EP V +W L +++HGD
Sbjct: 322 NSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGD 381
Query: 313 VELEDRAEELLGD-----LDP----SKAIVDKIPLPPRKKQSATNMLEEKNR-------- 355
+ DR+E+L+ D +D S ++ + K M E N+
Sbjct: 382 I---DRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPG 438
Query: 356 ---------VSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
V ++ + D E Y K+ + +++ GY P VL +ID + K
Sbjct: 439 CSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAF 498
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L++HSE+LA+A+GLI T P +RI+KNLR C DCH+ +K++SKI +++IVRD RFH
Sbjct: 499 QLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFH 558
Query: 463 HFRDGKCSCGDYW 475
HF +G CSC DYW
Sbjct: 559 HFINGDCSCKDYW 571
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ LL SC LK +GK++H L+ S D ++N LI MY C + A KVF ++
Sbjct: 98 TYPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKM 157
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R R++ SW MI G+ + + + + LFE+M + G P++ T + V ACA A AV G
Sbjct: 158 RDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMG 216
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 219/413 (53%), Gaps = 42/413 (10%)
Query: 90 RGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKR 149
R +LE+LD+ +L Q + S+L C +L S+ GK+
Sbjct: 308 RNGFELEALDLFILM---------------QKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH L F DV + + L+ MY KC ++ +FD+ +++ W+ +ISGYA++G
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 210 GADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
G + L +F +M +G P++ TF+ +AC+ A V+EG +E M++ +G+ P HY
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
++ +LG AG EA E ++ M EP VW +L + H +++ + + L +++P
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 329 SKA---------------IVDKIPLPPR------KKQSATNMLEEKNRVSDYRSTDLYRG 367
+ D L +K + E +N+V + +
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSH 592
Query: 368 EYEK-----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPP 422
++ + L+G +REAGY PD Y LHD+DEE K +L+YHSERLA+AY L+
Sbjct: 593 PEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSE 652
Query: 423 RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+P+R++KNLR+C DCH AIKI+SK+ RE+I+RD RFHHFR+G+CSC DYW
Sbjct: 653 GIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL-------RTS 157
LCKEG+V EA E D + +++++ G ++ +++ +++ TS
Sbjct: 182 LCKEGRVDEAREIF--DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTS 239
Query: 158 AF--------------------VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
VK V N +I G+ AR+VFD +++RN +SW
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMK 256
+I + NG + L LF M+K G P T + + + CAS ++ G ++ ++++
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 257 NDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ++ Y+A ++ + G L++++ +R P + + +W ++ + HG
Sbjct: 360 CQF----DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII-MWNSIISGYASHG 411
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N L+ Y K ARKVFD + +RN+ SW ++ GY NG+ LF +M P
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PE 138
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+K ++ V+ + + +E++ + I ++I L G + EA E
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEGRVDEARE 193
Query: 287 FVERMPFEPTVEVWEAL 303
+ M E +V W +
Sbjct: 194 IFDEMS-ERSVITWTTM 209
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 149 RVHEL--LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
++HE L S K + N ++ Y R ARK+FD++ RN+ SW+ ++SGY
Sbjct: 32 KIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMK 91
Query: 207 NGQGADGLMLFEQM 220
NG+ + +F+ M
Sbjct: 92 NGEIDEARKVFDLM 105
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 172 MYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++G C R+ AR++FD++ +R++ +W M++GY N + D +F+ M P +
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTE 234
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
++ + +++ FE+M V + A+I LG G + +A +
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMP-----VKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 290 RM 291
M
Sbjct: 290 SM 291
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 208/368 (56%), Gaps = 26/368 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C N+ +++G+ VH + F + L I+MY KC + A+ +F+ + R
Sbjct: 315 SALLACSNIGFLKLGRSVHGFI-VRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDR 373
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+L W+ MI+ A+G+G D L LF++M +TG PD TF + +A + + V+EG L+F
Sbjct: 374 DLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF 433
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M N + I P +HY+ ++ +L +G + EA + + M EPTV +W AL + +
Sbjct: 434 GRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKK 493
Query: 313 VELEDRAEELLGDLDPSK----AIVDKIPLPPRK-----------------KQSATNMLE 351
+EL + + + +L P A+V + +K K + +E
Sbjct: 494 LELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIE 553
Query: 352 EKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+ + D + E K+ L+ +MR+ GY+P T +V HD++EE KE+ L YH
Sbjct: 554 IRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYH 613
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAIA+GL++T P L IIKNLR+CGDCH+AIK +SKI RE++VRD KRFHHF+DG
Sbjct: 614 SERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDG 673
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 674 VCSCRDYW 681
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 7/184 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ +C +++ MG VH L DV L++MY K +A +VF +
Sbjct: 211 VMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLM 270
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
RN SW MISG+A NGQ + L LF M+ +G PD + AC++ +K G
Sbjct: 271 VHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR 330
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F + + D+ + G A I + G L A+ M + + +W A+
Sbjct: 331 SVHGFIVRRFDFNCILG----TAAIDMYSKCGSLASAQMLFN-MISDRDLILWNAMIACC 385
Query: 308 QIHG 311
HG
Sbjct: 386 GAHG 389
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+ L +C L + G+ V + + + DV + + L+ +Y + A KVF ++
Sbjct: 110 TFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRM 169
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+ +W M++G+ + GQ D + ++ +MR+ G D+ + V AC +A V+ G
Sbjct: 170 PRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 215/398 (54%), Gaps = 31/398 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ GK EA + + + D+ + SL+ +C +L +++ G+ H + +
Sbjct: 384 QNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETS 443
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI+MY KC L+R+VFD++ R++ SW+ MI+GY +G G + LF M+ G
Sbjct: 444 ICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQG 503
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD TF+ + AAC+ + V EG +F+ M + YGI+P +EHYI ++ +L G L EA
Sbjct: 504 FEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEA 563
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
+F++ MP + V VW AL +IH +++L + ++ L P
Sbjct: 564 YQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAA 623
Query: 332 ----------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYR----GEYEKMKGLNG 377
I+ K+ KK + +E + + D Y ++ +
Sbjct: 624 GRFDEAAEVRIIQKV--KGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILI 681
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+++ GY DT +VL D++EE KEKAL YHSE+LAIA+G++S + + KNLR+CGD
Sbjct: 682 DIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGD 741
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CH AIK M+ + R +IVRD RFHHF++G+CSCGD+W
Sbjct: 742 CHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S L C +L + MG ++H LL S D+ N L+ MY K A +FD++
Sbjct: 310 ASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAI 369
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ S+ ++SGY NG+ + ++F++M+ PD T + + AC+ A++ G
Sbjct: 370 KDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG--- 426
Query: 252 FEIMKNDYG--IVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ +G I+ G+ +I I + G + + + ++MP V W +
Sbjct: 427 ----RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVS-WNTMIA 481
Query: 306 FAQIHG 311
IHG
Sbjct: 482 GYGIHG 487
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L + G+ +H D+ ++ LI++Y +C A VF ++
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP 161
Query: 191 KRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ M++GYA +G + L + + G P+ T + + A A+ +G
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQG 220
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+ V + L++MY KC + A +VF + RN +W +I G+ + + LF+ M
Sbjct: 237 EQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDM 296
Query: 221 RKTGPHPDKETFLV-VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
G T + CAS ++ G ++ GI + +++ + AG
Sbjct: 297 LVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS-GIHADLTAGNSLLSMYAKAG 355
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ EA + + + T+ L + Q
Sbjct: 356 LINEATMLFDEIAIKDTISYGALLSGYVQ 384
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 207/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ C +E G ++H + ++ + D +++ L++MYGKC L+ ++F ++
Sbjct: 325 TFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEI 384
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+W+ I+ A +G G + + F++M +G P+ TF+ + AC+ A V EG
Sbjct: 385 EYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGL 444
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK+ +GI P EHY II + G AG L EAE+F+ MP +P W +L ++
Sbjct: 445 KYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRM 504
Query: 310 HGDVELEDRAEELLGDLDPSKAIVD------KIPLPPRKKQSATNMLEEKNR-------- 355
G+ EL + A + + L+P V L + A L NR
Sbjct: 505 RGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFS 564
Query: 356 -VSDYRSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
V + T ++ E YEK++ L +++E GYVPDTR++ ++++ AK++ L
Sbjct: 565 WVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRIL 624
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSER+A+A+ LIS P P+ + KNLRIC DCH+A+K +SK+ R++IVRDN RFHHF
Sbjct: 625 RYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHF 684
Query: 465 RDGKCSCGDYW 475
G CSCGDYW
Sbjct: 685 VKGGCSCGDYW 695
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 135 LDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L SCG + +G+ +H L+ + A L N LI MY C + A ++FD + + N
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
L SW ++SG N D L F M + G P +
Sbjct: 84 LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQ 119
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A M ++ A V S+L + G LK + + +H + S F ++V + N L +MY
Sbjct: 207 AFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMY 266
Query: 174 GKCCNTRLARKV--FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
K + A +V DQ N+ S +I GY L++F ++R+ G P++ T
Sbjct: 267 AKAADMDNAARVVKIDQ-GSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFT 325
Query: 232 FLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
F + CA +++G L+ E++K ++ ++ + G G + + + +
Sbjct: 326 FSSMIKGCAMQALLEQGAQLHAEVIKTS--LISDSFVSSTLLDMYGKCGLISLSIQLFKE 383
Query: 291 MPFEPTVEVWEALRNFAQIHG 311
+ + + W A N HG
Sbjct: 384 IEYHTDI-AWNAAINVLAQHG 403
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F ++ + + L +MY K A +VFDQ+ +++ +W MI GYA NG ++ F
Sbjct: 149 GFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAF 208
Query: 218 EQMRKTG-PHPDKETFLVVFAACASAEAVKEGFL 250
MR+ G D+ V +A + +K+G+L
Sbjct: 209 RDMRREGLVGADQHVLCSVLSA---SGGLKDGWL 239
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 204/371 (54%), Gaps = 31/371 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L SC L + E GK VH ++ V L +LI+ Y KC + +VF ++ +
Sbjct: 328 SVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK 387
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W +I G A NG+G L F M + P+ TF+ V +AC+ A V +G F
Sbjct: 388 NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLF 447
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ D+ I P IEHY ++ +LG AG L EA +F++ MPF P VW L + H +
Sbjct: 448 NSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKN 507
Query: 313 VELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATNMLE 351
+E+ +++ E + L+P+ A+V ++ R KK +++E
Sbjct: 508 IEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIE 567
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNG-------QMREAGYVPDTRYVLHDIDEEAKEKAL 404
V ++ S D GE++ K ++ Q++ GYVP+T + +EE+KE ++
Sbjct: 568 LDGVVHEFFSED---GEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSV 624
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIAYGLI T PR +RI KNLR+C DCHNA K +S++ R +IVRD RFHHF
Sbjct: 625 SHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHF 684
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 685 KDGLCSCNDYW 695
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +CG L ++E+G+ + E + + ++ L LI+MY KC ARK+FD++ KR
Sbjct: 227 SVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKR 286
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLY 251
++ +W MISGYA + + L LF +M+K +P++ T + V +CA A + G +++
Sbjct: 287 DVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVH 346
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
F I K + + +I G++ + E + M F+ V W AL
Sbjct: 347 FYIKKKKMKLTVTLG--TQLIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTAL 395
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +C +K++ G++VH L+ S F + + N LI+MY C +AR VFD +
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W+ M+SGY NG + + LF ++ + D T + V AC ++ G L
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGEL 243
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
E + + G+ ++I + G + A + + M + V W A+
Sbjct: 244 IGEYIVSK-GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAM 294
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +F+ + K S++++MI G A + L+LF++M + DK TF V AC+
Sbjct: 74 ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+A++EG ++ I+K+ + +E+ +I++ + G + A + MP E ++ W
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVEN--TLIQMYANCGQIGVARHVFDGMP-ERSIVAW 190
Query: 301 EAL 303
++
Sbjct: 191 NSM 193
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 232/417 (55%), Gaps = 38/417 (9%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSI 144
P R + +L + + G+ EA++ + D + + S+LL +C ++ +
Sbjct: 270 PYRNDVTWSAL---ISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALL-ACASVGFL 325
Query: 145 EMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
++GK +H +LR + L +++MY KC + ARK+F++L R+L W+ +I+
Sbjct: 326 KLGKSIHGFILRRLEW--QCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIAC 383
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
+G G D L LF+++ +TG PD TF + +A + + V+EG +F+ M ++GI P
Sbjct: 384 CGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEP 443
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+HY+ I+ +L +G + EA + + M EPT+ +W L + + +EL + + +
Sbjct: 444 AEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKI 503
Query: 324 GDLDPSK----AIVDKIPLPPRK-----------------KQSATNMLEEKNR----VSD 358
+L P A+V + +K K +++E K V +
Sbjct: 504 LELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVME 563
Query: 359 YRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLI 418
+S +R + + LN +MR+ GYVP T +V HD+DE+ + L YHSERLAIA+GL+
Sbjct: 564 DQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDED---QLLSYHSERLAIAFGLL 620
Query: 419 STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+T P L IIKNLR+CGDCH+AIK +SKIV RE++VRD KRFHHF+DG CSCGDYW
Sbjct: 621 NTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 15/223 (6%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
+SA F+ L +C L ++ + V + + DV + + L+ +Y +C
Sbjct: 101 SSARPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEE 160
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +VFD + +++ +W M++G+ G+ + L ++ +MR+ G D+ + V AC S
Sbjct: 161 AIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMS 220
Query: 242 A-----EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPT 296
A G L M+ D + +++ + GHL A + MP+
Sbjct: 221 TGNARIGASVHGRLLRHCMRMD------VVTTTSLVSMYAKNGHLDVACQVFRMMPYRND 274
Query: 297 VEVWEAL-RNFAQIHGDVELEDRAEELLGD-LDP-SKAIVDKI 336
V W AL FAQ VE D EL D L P S A+V +
Sbjct: 275 V-TWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSAL 316
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V ++ +C + + +G VH L DV L+ MY K + +A +VF +
Sbjct: 210 VMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMM 269
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
RN +W +ISG+A NG+ + L LF +++ G P + ACAS +K G
Sbjct: 270 PYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGK 329
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F + + ++ + G A++ + G L A + ++ V +W A+
Sbjct: 330 SIHGFILRRLEWQCILG----TAVLDMYSKCGSLESARKLFNKLSSRDLV-LWNAIIACC 384
Query: 308 QIHG 311
HG
Sbjct: 385 GTHG 388
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 208/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C + ++E+G+ +H ++ + + + + LI MY KC + AR+VF+ + KR
Sbjct: 372 STLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W MI G A +G G++ + +F +M++ P+ TF VF AC+ V E F
Sbjct: 432 DVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 491
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M++ YGIVP +HY I+ VLG +G+L +A +F+E MP P+ VW AL +IH +
Sbjct: 492 YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 551
Query: 313 VELEDRAEELLGDLDP----SKAIVDKI-----------------PLPPRKKQSATNMLE 351
+ L + A L +L+P + ++ I + KK+ + +E
Sbjct: 552 LSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIE 611
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDI-DEEAKEKALQY 406
+ ++ S D + Y K+ + +++ GY P+ +VL I +EE KE++L
Sbjct: 612 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNL 671
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI YGLIST +R+IKNLR+CGDCH K++S++ RE+IVRD RFHHFR+
Sbjct: 672 HSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRN 731
Query: 467 GKCSCGDYW 475
G+CSC D+W
Sbjct: 732 GQCSCNDFW 740
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L+ + + S+ +G+ +H + SA DV + N LI Y C + A KVF +
Sbjct: 135 TFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 194
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++++ SW+ MI+G+ G L LF++M T + V +ACA ++ G
Sbjct: 195 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFG 253
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +L +C ++ +E G+RV + + ++ L N +++MY KC + A+++
Sbjct: 232 ASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 291
Query: 186 FDQLR-------------------------------KRNLSSWHLMISGYAANGQGADGL 214
FD + K+++ +W+ +IS Y NG+ + L
Sbjct: 292 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEAL 351
Query: 215 MLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAII 272
++F +++ + ++ T + +ACA A++ G +++ I KN GI A+I
Sbjct: 352 LVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKN--GIKMNFYVTSALI 409
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ G L +A E + + V VW A+ +HG
Sbjct: 410 HMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHG 447
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKL--IEMYGKCCNTRLARKVFDQL 189
SL+D C +L+ + K+ H ++RT F D +KL I + ARKVFD++
Sbjct: 36 SLIDRCSSLRQL---KQTHAHMIRTGMF-SDPYSASKLFAIAALSSFASLEYARKVFDEI 91
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAEAVKE 247
+ N +W+ +I YA+ + F M ++ +P+K TF + A A ++
Sbjct: 92 PQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSL 151
Query: 248 G 248
G
Sbjct: 152 G 152
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 206/370 (55%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +I++G+ +H + R L LI+MY KC + A +VF+ +
Sbjct: 302 SVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSML 361
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++LSSW+ MI G+A +G+ LF +MRK G PD TF+ + +AC+ + + G
Sbjct: 362 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRH 421
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M DY + P +EHY +I +LG +G EAEE + M EP +W +L ++H
Sbjct: 422 IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMH 481
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPP-----------------RKKQSATNM 349
G+VEL + + L ++P S ++ I KK +
Sbjct: 482 GNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSS 541
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLNGQMRE----AGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D + + ++ G+ +M AG+VPDT VL +++EE KE AL+
Sbjct: 542 IEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALR 601
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE++ RD RFHHFR
Sbjct: 602 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFR 661
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 662 DGVCSCNDYW 671
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D + ++L +C + SIE+G++VH + F ++++
Sbjct: 175 GCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIV 234
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI++Y KC A +F L +++ SW+ +I GY + L+LF++M ++G
Sbjct: 235 NALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 294
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T L V ACA A+ G +++ I K G+ ++I + G + A
Sbjct: 295 PNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 354
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
+ M ++ W A+ +HG
Sbjct: 355 QVFNSM-LHKSLSSWNAMIFGFAMHG 379
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-------- 181
F LL SC K+ G+++H + F D+ ++ LI MY + N RL
Sbjct: 66 TFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQ--NWRLEDAYKVFD 123
Query: 182 -------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
A+K+FD++ +++ SW+ MISGYA G + L L
Sbjct: 124 RSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALEL 183
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
FE+M K PD+ T++ V +ACA + +++ G + +D+G ++ A+I +
Sbjct: 184 FEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWV-DDHGFDSNLKIVNALIDLYS 242
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A + + ++ + W L
Sbjct: 243 KCGEVETACGLFQGLSYKDVIS-WNTL 268
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF+ +++ N W+ MI G+A + L L+ M G P+ TF + +CA
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
++ EG ++ +++K + + + + ++I + L +A + +R V
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDL--DLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR 360
+ +A GD+ ++ + D+IP+ +++ +S Y
Sbjct: 135 ALITGYAS--------------RGDIRSAQKLFDEIPVK--------DVVSWNAMISGYA 172
Query: 361 STDLYRGE---YEKMKGLNGQMREAGYV 385
T Y+ +E+M +N + E+ YV
Sbjct: 173 ETGCYKEALELFEEMMKMNVRPDESTYV 200
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 201/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S++ +C +L +++ GK +H +R + ++ L LI MY K A +VF L
Sbjct: 423 ILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGL 482
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ +S+W+ +I G A NG L F +M++ G P++ TF+ V AC V EG
Sbjct: 483 EEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGH 542
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M ++ I P I+HY ++ +LG AG L EAEE +E MP P V W AL +
Sbjct: 543 RHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKK 602
Query: 310 HGDVELEDRAEELLGDLDP--------------SKA-IVDKIPLPPRKKQSAT------N 348
+GD E +R L +L P SK VD + + +Q +
Sbjct: 603 YGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCS 662
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAKEKAL 404
M+E RV ++ + D + E ++ + +M + GY PDTR V DIDEE KE L
Sbjct: 663 MIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTL 722
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAIA+GLI+ P P+RI+KNLRIC DCH A K++SK RE++VRD RFHHF
Sbjct: 723 FRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHF 782
Query: 465 RDGKCSCGDYW 475
+ G CSC DYW
Sbjct: 783 KQGSCSCMDYW 793
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG--------------- 174
V S+L +C L + GK VH L+ V L N LI MY
Sbjct: 291 VVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSES 350
Query: 175 ----------------KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
KC AR +FD + ++ SW MISGYA + + L+LF+
Sbjct: 351 CCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQ 410
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M+ G PD+ + V +AC A+ +G +++ I KN G+ I +I +
Sbjct: 411 EMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKN--GLKINIILGTTLINMYMK 468
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEAL 303
G + +A E + + E V W AL
Sbjct: 469 LGCVEDALEVFKGLE-EKGVSTWNAL 493
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 100 VNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+N+ ++C G + +A + D S+ ++S+L + ++E K V++ +
Sbjct: 168 INMYAVC--GNLSDARKVF--DGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPE--- 220
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++V +N +I ++GK N A K+F+++++++L SW +IS Y N + L+LF++
Sbjct: 221 -RNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKE 279
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV--PGIEHYI----AIIK 273
M G D+ L V +AC+ V G L +G+V GIE Y+ A+I
Sbjct: 280 MNANGIMVDEVVVLSVLSACSRLLVVITGKLV-------HGLVVKVGIETYVNLQNALIH 332
Query: 274 VLGSAGHLIEAEE-FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI 332
+ S ++ A++ F E + W ++ I G V+ G+++ ++A+
Sbjct: 333 MYSSCEEVVTAQKLFSESCCLDQI--SWNSM-----ISGYVK--------CGEIEKARAL 377
Query: 333 VDKIP 337
D +P
Sbjct: 378 FDSMP 382
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
++M + A+ Y + L SC + GK + + + F DV + N LI MY
Sbjct: 115 KFMLESNVAADNY-TYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAV 173
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
C N ARKVFD ++ SW+ M++GY G + ++++M
Sbjct: 174 CGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM 218
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 204/369 (55%), Gaps = 26/369 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL-R 190
SS+L +C L +++ GK VH + + DV L LI+MY KC + A+ +FD L
Sbjct: 199 SSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGP 258
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ +W MI+ ++ +G + L LF +M G P+ TF+ V AC V EG
Sbjct: 259 EKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNE 318
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M N+YG+ P I+HY ++ + AG + +A V+ MP EP V +W AL N A+IH
Sbjct: 319 YFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIH 378
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
GDVE + A L +LDP+ + + D + + KK ++
Sbjct: 379 GDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSL 438
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + ++ + D E Y + + ++ + GY +T VL D+DEE KE AL
Sbjct: 439 VEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALS 498
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIAY + T P +RI+KNLRIC DCH AIKI+SK RE+IVRD RFHHF+
Sbjct: 499 LHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFK 558
Query: 466 DGKCSCGDY 474
+G CSC DY
Sbjct: 559 NGLCSCKDY 567
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ N +I K +ARK+FDQ+ ++N+ SW MI GY + G+ L LF ++
Sbjct: 125 DLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQ 184
Query: 222 K---TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+ P++ T V +ACA A++ G + + G+ + ++I +
Sbjct: 185 TLEGSQLRPNEFTMSSVLSACARLGALQHG-KWVHAYIDKTGMKIDVVLGTSLIDMYAKC 243
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + A+ + + E V W A+ +HG
Sbjct: 244 GSIERAKCIFDNLGPEKDVMAWSAMITAFSMHG 276
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCG-NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L+ C S+ GK+ H S + +++ L+ MY K + A +VF +
Sbjct: 501 FSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ 560
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+++L SW+ MISGYA +GQ L +F++M+K D TF+ VFAAC A V+EG
Sbjct: 561 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGE 620
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+IM D I P EH ++ + AG L +A + ++ MP +W + ++
Sbjct: 621 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRV 680
Query: 310 HGDVEL-------------EDRAEELL--------GDLDPSKAIVDKIPLPPRKKQSATN 348
H EL ED A +L GD + + KK+ +
Sbjct: 681 HKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 740
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN+ + RS L Y K++ L+ ++++ GY PDT YVL DID+E KE L
Sbjct: 741 WIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVL 800
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+GLI+TP PL IIKNLR+CGDCH IK+++KI RE++VRD+ RFHHF
Sbjct: 801 AQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHF 860
Query: 465 -RDGKCSCGDYW 475
DG CSCGD+W
Sbjct: 861 SSDGVCSCGDFW 872
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 96 ESLDVNLLSLCKEGKVREA------IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKR 149
ES L ++G+ +EA I+++G + S +FSS+L L G++
Sbjct: 63 ESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCS----IFSSVLKVSATLCDELFGRQ 118
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H F+ DV + L++ Y K N + R VFD++++RN+ +W +ISGYA N
Sbjct: 119 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSL 178
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
+ L LF +M+ G P+ TF A
Sbjct: 179 NEEVLTLFMRMQDEGTQPNSFTFAAALGVLA 209
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G +VH ++ + K + ++N LI +Y KC N R AR +FD+ +++ +W+ MISGYAA
Sbjct: 217 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 276
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-EGFLYFEIMKNDYGIVPGI 265
NG + L +F MR + +F + CA+ + ++ L+ ++K YG V
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVK--YGFVFDQ 334
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ +++A + F V W A+
Sbjct: 335 NIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAM 372
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S++ C NLK + +++H + FV D + L+ Y KC A ++F +
Sbjct: 302 FASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETG 361
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
N+ SW MISG+ N + + LF +M++ G P++ T+ V+ A
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
VH + + + + + L++ Y K A KVF + +++ +W M++GYA G+
Sbjct: 419 VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGE 478
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA-VKEGFLYFEIMKNDYGIVPGIEHY 268
+ +F ++ K G P++ TF + CA+ A + +G + + + I ++
Sbjct: 479 TEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQF-----HGFAIKSRLDSS 533
Query: 269 I----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLG 324
+ A++ + GH+ AEE +R + V + +AQ HG +A ++
Sbjct: 534 LCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQ-HGQAM---KALDVFK 589
Query: 325 DLDPSKAIVDKIPL 338
++ K +D +
Sbjct: 590 EMKKRKVKMDSVTF 603
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 208/373 (55%), Gaps = 35/373 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVH-----ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
++ +C L S+ +G+ H LL +AF+ +I+MY K + KVF+
Sbjct: 586 TVFGACSLLPSLRLGREAHAYALKHLLEDNAFIA-----CSIIDMYAKNGAITQSSKVFN 640
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L++++ +SW+ MI GY +G+ + + LFE+M++TG +PD TFL V AC + + E
Sbjct: 641 GLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHE 700
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G Y + MK+ +G+ P ++HY +I +LG AG L A M EP V +W +L ++
Sbjct: 701 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWC 760
Query: 308 QIHGDVEL-EDRAEEL--------------------LGDLDPSKAIVDKIPLPPRKKQSA 346
+IH ++E+ E A +L LG D + + ++ +K +
Sbjct: 761 RIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAG 820
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E +V + + + +E++K L ++ + GY PDT V HD+ EE K +
Sbjct: 821 CSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIE 880
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L+ HSE+LAI YGLI T LR+ KNLRIC DCHNA K++SK++ RE++VRDNKRFH
Sbjct: 881 QLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFH 940
Query: 463 HFRDGKCSCGDYW 475
HF G CSCGDYW
Sbjct: 941 HFNKGFCSCGDYW 953
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 28/275 (10%)
Query: 51 PNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGK 110
P V + R +K+ + + + +S N N LR + + C+ G
Sbjct: 9 PQLSVLFDYRRSRKESSFPRADYNSNAISSNSTNANHFLR----------RISNFCETGD 58
Query: 111 V----REAIEYMGQDASASAGYDVF-------SSLLDSCGNLKSIEMGKRVHELLRTSAF 159
+ R E+ G D S+S DVF LL + G K IEMG+++H L+ S
Sbjct: 59 LDKSFRVVQEFAGDDESSS---DVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTR 115
Query: 160 VK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
++ D L ++I MY C + +R FD LR +NL W+ +IS Y+ N + L +F
Sbjct: 116 LRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFI 175
Query: 219 QM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M KT PD TF V ACA V G ++ G+V + A++ G+
Sbjct: 176 KMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKT-GLVEDLFVGNALVSFYGT 234
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
G + +A + + MP E + W ++ +GD
Sbjct: 235 HGFVSDALKLFDIMP-ERNLVSWNSMIRVFSDNGD 268
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C LKS+ +GK VH + + +D+ + ++ +Y C + +FD +
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L SW+ +I+G+ NG L LF QM G P + + VF AC+ +++ G
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG 600
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K +H FV D L N + Y KC + A++VF +R + L+SW+ +I GYA +
Sbjct: 399 KELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQS 458
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----EGFLYFEIMKNDYGIV 262
L QM+ +G PD T + +AC+ ++++ GF+ ++ D +
Sbjct: 459 SDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV- 517
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
Y++++ + G L + + M
Sbjct: 518 -----YLSVLSLYIHCGELCTVQVLFDAM 541
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ +C + + +G VH L+ + V+D+ + N L+ YG A K+FD +
Sbjct: 190 FPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+RNL SW+ MI ++ NG DG + PD T + V CA + G
Sbjct: 250 ERNLVSWNSMIRVFSDNGD--DGAFM----------PDVATVVTVLPVCAREREIGVG 295
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Query: 119 GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN 178
G D + ++L C + I +GK VH + K++ +NN L++MY K
Sbjct: 267 GDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGC 326
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVF 236
++ +F +N+ SW+ M+ G++A G L QM D+ T L
Sbjct: 327 IIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAV 386
Query: 237 AACASAE-----------AVKEGFLYFEIMKNDY 259
C ++K+ F+Y E++ N +
Sbjct: 387 PVCFDESVLPSLKELHCYSLKQEFVYDELLANAF 420
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 215/398 (54%), Gaps = 29/398 (7%)
Query: 107 KEGKVREAIEY----MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
K GK EA+E M + S+L +C ++E GK +H +
Sbjct: 252 KNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSI 311
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ + + LI MY +C + +FD++ K+++ W+ +IS Y +G G + +FE+M
Sbjct: 312 LPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMID 371
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
G P +F+ V AC+ V+EG FE M ++GI P +EHY ++ +LG A L
Sbjct: 372 HGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLD 431
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----------- 331
EA + +E + EP +VW +L +IH VEL +RA + L L+P+ A
Sbjct: 432 EAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYA 491
Query: 332 ---IVDKIP-----LPPRKKQSAT--NMLEEKNRVSDYRSTDLYRGEYEKMKGL----NG 377
+ D++ L R+ Q + +E + ++ + S D + + E++ L +
Sbjct: 492 EAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSN 551
Query: 378 QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+M++ GY P T+ VL+D+D+E KE+ + HSE+LA+A+GLI+T +RI KNLR+C D
Sbjct: 552 EMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCED 611
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CH+ K +SK RE++VRD RFHHF+DG CSCGDYW
Sbjct: 612 CHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLCK+G +++A+ + +++ + L+ S S+ VH+LL F +D
Sbjct: 47 SLCKQGNLKQALYLLSHESNPTQ--QTCELLILSAARRNSLSDALDVHQLLVDGGFDQDP 104
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI M+ + ARKVFD+ RKR + W+ + A G+G D L L+ +M
Sbjct: 105 FLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMM 164
Query: 224 GPHPDKETFLVVFAACASAEAV-----KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
G D+ T+ + AC ++E + K ++ I+++ YG + ++ +
Sbjct: 165 GVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG--AHVHVMTTLMDMYARF 222
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G + A + MP + V W A+
Sbjct: 223 GCVSYASAVFDEMPVKNVVS-WSAM 246
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 130 VFSSLLDSCGN----LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
++ LL +C + ++ GK +H + + V + L++MY + A V
Sbjct: 172 TYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM--RKTGPHPDKETFLVVFAACASAE 243
FD++ +N+ SW MI+ YA NG+ + L LF +M P+ T + V ACA+
Sbjct: 232 FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA 291
Query: 244 AVKEG-FLYFEIMKNDY-GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
A+++G ++ I++ I+P I A+I + G L + +RM + V +W
Sbjct: 292 ALEQGKLIHAYILRRGLDSILPVIS---ALITMYARCGKLESGQLIFDRM-HKKDVVLWN 347
Query: 302 ALRNFAQIHG 311
+L + +HG
Sbjct: 348 SLISSYGLHG 357
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 210/372 (56%), Gaps = 27/372 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +L SC + +++ G+RVH L + F ++ + + +I+MY C N A++ F +
Sbjct: 327 VLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGM 386
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++++ W+ MI+G NG G D + LF QM+ +G PD+ TF+ V AC+ A V EG
Sbjct: 387 GEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGL 446
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++K + I P ++HY +I +LG AG L A F+ MPF+P +V+ L +
Sbjct: 447 QIFYHMVKTSHDI-PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACR 505
Query: 309 IHGDVELEDRAEELLGDLDPSKA-----IVDKIPLPPR----------------KKQSAT 347
IHG+++L + + +++P+ A + + L KK
Sbjct: 506 IHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGF 565
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + + + + +Y K +KGL ++++AGYVP+T +L D+ ++ K+
Sbjct: 566 SSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDI 625
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L +HSE++AIA+GL+ T P +RI KNLR C DCH+A K +SK+ GR L+++D RFH
Sbjct: 626 LYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHV 685
Query: 464 FRDGKCSCGDYW 475
F+DG CSC DYW
Sbjct: 686 FQDGVCSCRDYW 697
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L + NL I + K VH F +V + L++MY K +AR++F+ + +
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE 185
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
RN+ SW+ ++SGY+ +G + + LF MR+ G D T + + A S ++ G
Sbjct: 186 RNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 10/178 (5%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
LK ++ +++H + TS + L+N L+ Y C A+++F +N+ SW ++
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
ISG A N + + +F +M P+ T V A A+ G + + +
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANL-----GLIRIAKSVHCFW 148
Query: 261 IVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ G E + A++ + G + A + E M E V W A+ + HG E
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVSWNAIVSGYSDHGFSE 205
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ + ++ +++G +H + + + D + L+++Y A +VF ++ +
Sbjct: 228 SLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVK 287
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEG-FL 250
++++W LM++G+++ + F +M D + + ++C+ + A+++G +
Sbjct: 288 DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRV 347
Query: 251 YFEIMKNDYG--IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +K + I G A+I + + G+L +A+ F M E V W A+
Sbjct: 348 HALAIKTCFANNIFVG----SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAM 397
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 205/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGN-LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS +D+C + +++G++ H + + +++ L+ MY + + A+ VF++
Sbjct: 460 ISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQ 519
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ M+SGYA +G L +F QM G D TFL V CA A V+EG
Sbjct: 520 TDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQ 579
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++M DYGI P ++HY ++ + AG L E +E MPF +W AL ++
Sbjct: 580 QYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRV 639
Query: 310 HGDVELEDRAEELLGDLDP----SKAIVDKIPLPPRK-----------------KQSATN 348
H +VEL A E L L+P + ++ I K K++ +
Sbjct: 640 HKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCS 699
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ KN+V + ++D L Y K++ + ++++ GY PDT +V HD+ E+ KE L
Sbjct: 700 WIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAML 759
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLA+A+GLI+TPP PL I KNLR+ GD H +K++S+I RE+++RD RFHHF
Sbjct: 760 AMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHF 819
Query: 465 RDGKCSCGDYW 475
+ G CSCGD+W
Sbjct: 820 KSGVCSCGDFW 830
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 23/196 (11%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L + +++G+ VH V + N L+ MY KC AR VF ++
Sbjct: 160 FSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRME 219
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS--------- 241
R++ SW+ +++G NG+ + L LF R + + T+ V CA+
Sbjct: 220 TRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQ 279
Query: 242 --AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ +K GF + YG V A++ AG L +A + M V
Sbjct: 280 LHSSVLKHGF-------HSYGNV-----MTALMDAYNKAGQLDKALDVFLLMSGSQNVVS 327
Query: 300 WEALRNFAQIHGDVEL 315
W A+ + +GD+ L
Sbjct: 328 WTAMIDGCIQNGDIPL 343
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ CG++ +GK++H L +R D+ + L++MY + RKVF+ + KR
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ +W +++GY G D + LF +MR G P+ TF V + AS V G
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG 176
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 11/185 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S++++ C NLK + + +++H + F + L++ Y K A VF +
Sbjct: 261 YSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMS 320
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ SW MI G NG LF +MR+ G P+ T+ + +EA
Sbjct: 321 GSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV---SEASFPPQ 377
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE--RMPFEPTVEVWEALRNFA 307
++ +++K +Y P + + + S L EE + +M + V W A+
Sbjct: 378 IHAQVIKTNYECTPTVGTALMV-----SYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCY 432
Query: 308 QIHGD 312
GD
Sbjct: 433 AQAGD 437
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ Y K C+T A +F + ++++ SW M++ YA G F +M G
Sbjct: 393 VGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHG 452
Query: 225 PHPDKETFLVVFAACASAEA 244
P++ T ACAS A
Sbjct: 453 LKPNEFTISSAIDACASPAA 472
>gi|224136634|ref|XP_002326908.1| predicted protein [Populus trichocarpa]
gi|222835223|gb|EEE73658.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/257 (48%), Positives = 158/257 (61%), Gaps = 20/257 (7%)
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M+ G PD +F+ V AC A KEG +FE M DYGI P +EHY + +LG G
Sbjct: 1 MKGDGIRPDGSSFVGVLMACVCLGAEKEGQKHFESMSRDYGITPTVEHYEVFVDLLGRTG 60
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL- 338
+ EA+E V MP +P +WE L+ +++ R + LG P+
Sbjct: 61 KIAEAKELVSNMPIDPNSRIWETLQKYSKA--------RTQGQLG-----------YPVS 101
Query: 339 PPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE 398
PP K ++ + R T YEK++ L+ ++R+AGYVPDTR+VLHD+D+E
Sbjct: 102 PPGLKLGDMKRAKDNTNTNHRRVTSDRSKAYEKLRSLSKEVRDAGYVPDTRFVLHDLDQE 161
Query: 399 AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
AKEKAL YHSERLAIAYGLI+T P LRI+KNLRICGDCHN IKI+SKI RE IVRDN
Sbjct: 162 AKEKALFYHSERLAIAYGLINTSPGTTLRIMKNLRICGDCHNFIKILSKIEDREFIVRDN 221
Query: 459 KRFHHFRDGKCSCGDYW 475
KRFHHF+ G CSC DYW
Sbjct: 222 KRFHHFKAGNCSCRDYW 238
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 204/370 (55%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L SC NL ++ G +H + S FVK++ + + LI MY KC + A ++F++
Sbjct: 188 YSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE 247
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
RN+ W +I+ +G + LFEQM + G PD TF+ V +AC+ V+EGF
Sbjct: 248 DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFF 307
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M +GI PG EHY I+ +L AG L A+ F+E MP +P VW AL + + H
Sbjct: 308 YFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNH 367
Query: 311 GDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNM 349
++ + L DL+P + + K+ +K+ +
Sbjct: 368 SNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSW 427
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ KN + +S + + YE ++ L +++ GYV +T + + + EE KE++L
Sbjct: 428 IDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLW 486
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE++A+A+GL+S P P+RI KNLR CGDCH +K S+I RE+IVRD RFHHF
Sbjct: 487 YHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFT 546
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 547 NGICSCGDYW 556
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+ +C N ++E GK+VH + V +NN L +MYGKC K+F
Sbjct: 87 FSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTG 146
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R++ +W++MI Y N D F MR+ G PD+ ++ V +CA+ A+ +G
Sbjct: 147 ARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTL 206
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ +I+++ G V + ++I + G L++A + E + V W A+ Q
Sbjct: 207 IHNQIIRS--GFVKNLRVASSLITMYAKCGSLVDAFQIFEETE-DRNVVCWTAIIAACQQ 263
Query: 310 HG 311
HG
Sbjct: 264 HG 265
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 27/118 (22%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS++L +C + + G+++H L+ F+ +V + + L++MY KCC+ +A KVF+++
Sbjct: 13 FSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP 72
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L E + D+ +F VF+ACA+A ++ G
Sbjct: 73 T-----------------------LLLENLTAL----DEVSFSSVFSACANAGNLEFG 103
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 203/372 (54%), Gaps = 33/372 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C L ++ K +H + + + DV L +I+MY KC + AR +FD+++ R
Sbjct: 257 TVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVR 316
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ +W MI+ Y +GQG L LF M ++G P++ TF+ + AC+ A ++EG +F
Sbjct: 317 NVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFF 376
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M ++YG+ P ++HY ++ +LG AG L EA E +E MP E +W AL +IH
Sbjct: 377 SSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRH 436
Query: 313 VELEDR-AEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
++L +R A LL G + D + +K +E
Sbjct: 437 LDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIE 496
Query: 352 EKNRVSDY--------RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
++ + RS ++Y+ +K L ++ AGY PDT VL+D+DEE K+
Sbjct: 497 VGEKLYQFGVGDKTHPRSNEIYK----MLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGL 552
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LAIA+GL+ P P+RI KNLR+CGDCH K +S I + +IVRD KRFHH
Sbjct: 553 LYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHH 612
Query: 464 FRDGKCSCGDYW 475
F++G CSC DYW
Sbjct: 613 FKEGVCSCRDYW 624
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C +LK ++ G+ +H + + L++MY +C A ++F ++ KR+
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRD 216
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L++W +MI A +G + L+ F++MR G PDK + V ACA A+ +
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+ N G + A+I + G + A +RM + W A+ HG
Sbjct: 277 YI-NGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVI-TWSAMIAAYGYHGQG 334
Query: 314 E 314
E
Sbjct: 335 E 335
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S L SC NL + ++VH + T+ +++ + NKL+ MY + A+++FD +
Sbjct: 56 FRSSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMS 112
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
KR+ SW +++ GYA G +F ++ ++G D + VV AC + +K G L
Sbjct: 113 KRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRL 172
Query: 251 YFEIMKN---DYG 260
I DYG
Sbjct: 173 IHCITLKCGLDYG 185
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 203/367 (55%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL +C +L ++E G+R+H + + + L N LI MY +C A +VF + +N
Sbjct: 213 LLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKN 272
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW MISG A NG G + + FE+M + G PD +TF V +AC+ + V EG +F
Sbjct: 273 VVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFH 332
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M ++G+ P + HY ++ +LG AG L +A + + M +P +W L +IHG V
Sbjct: 333 RMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHV 392
Query: 314 ELEDR---------AEE-----LLGDLDPSKAIVDKIP----LPPRKKQSAT---NMLEE 352
L +R A+E LL ++ S +K+ L K T + +E
Sbjct: 393 TLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIEL 452
Query: 353 KNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
K V ++ D+ R YE + +N Q+R AGYV + LH +D++ K L +HS
Sbjct: 453 KGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVLSHHS 512
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+G+++TPP LR+ NLR+C DCHN +K+ S + R++++RD+ RFHHFR G+
Sbjct: 513 EKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNRDVVLRDHNRFHHFRGGR 572
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 573 CSCSDYW 579
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SC + G +VH + D L ++++Y C A KVFD++ R+ +
Sbjct: 113 SCIRFLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVA 172
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTG--PHPDKETFLVVFAACASAEAVKEG 248
W++MIS N + D L LF+ M+ + PD T L++ ACA A++ G
Sbjct: 173 WNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFG 226
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 214/371 (57%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS++ +C L ++ GK+++ LL S F ++ + + LI+MY KC + KVF +
Sbjct: 268 LMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV 327
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KRN+ W+ MISG + + + + ++LFE+M++ G P+ TF+ V +AC V++G
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQ 387
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++M ++ + P + HY ++ L AG + EA + + ++PF + +W +L +
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIPLPPR-------KKQSATN 348
HG++EL + A + L D++P + D++ + KK+ +
Sbjct: 448 HGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKS 507
Query: 349 MLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E K++V + R+ Y K+ + ++++ GY +T++ LH + E K++ L
Sbjct: 508 WIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELL 567
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
++HSE+LA GL+ PP P+RI+KNLRICGDCH+ +K+ SK R++IVRD RFHHF
Sbjct: 568 RHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHF 627
Query: 465 RDGKCSCGDYW 475
++G CSCGD+W
Sbjct: 628 KNGCCSCGDFW 638
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L C K + GK H + D+ +N LI MY KC + AR+VFD++ R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L SW+ MI NG+ + L L QM++ G + T V ACA+ A+ E L
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL-- 187
Query: 254 IMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + I ++ + A++ V G + +A E MP + +V W ++
Sbjct: 188 ---HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 95 LESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHE 152
L S + + SL + G+ EA++ + Q + F SS+L +C ++ + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGAD 212
+A +V + L+++Y KC + A VF+ + R++ +W M +GY N
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 213 GLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L LF + +TG D+ V ACA A+ EG
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG 285
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 210/373 (56%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V +++L +C + ++E G +H+ + + V D +L +I+MY KC A VF L
Sbjct: 236 VAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGL 295
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
+ + +SSW+ MI G+A +G+G D + LF++M + PD TF+ V ACA + V+EG
Sbjct: 296 KVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEG 355
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ YF M + +GI P EHY ++ +L AG L EA++ ++ MP P V AL +
Sbjct: 356 WYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACR 415
Query: 309 IHGDVELEDRAEELLGDLDPSK--------------------AIVDKIPLPPR--KKQSA 346
IHG++EL + + +LDP A V K+ + R KK+
Sbjct: 416 IHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKL-MDDRGVKKEPG 474
Query: 347 TNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+M+E + V+++ R L Y K+ + +R G+VPDT VLHD+ EE +E
Sbjct: 475 FSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEEREN 534
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L YHSE+LAIAYGL+ T LR+ KNLR+C DCH A K++SK+ ++I+RD RFH
Sbjct: 535 PLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFH 594
Query: 463 HFRDGKCSCGDYW 475
HF +G+CSC DYW
Sbjct: 595 HFSNGECSCKDYW 607
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SL+ +C K E K++H + F D N LI +Y + AR+VF +
Sbjct: 106 FPSLIRAC---KLEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMS 162
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQM 220
N+ SW ++SGY+ G + +FE M
Sbjct: 163 DPNVVSWTSLVSGYSQWGLVDEAFRVFELM 192
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 203/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S L C ++ ++E G+++H + + D+ + + L+++YGKC A +F L
Sbjct: 356 TLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ SW+ +ISGY+ +GQG L F M G PD+ TF+ V +AC+ V+EG
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK 475
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M YGI P IEHY ++ +LG AG E + F+E M P +WE + ++
Sbjct: 476 KRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKL 535
Query: 310 HGDVELEDRAEELLGDLDP--------------SKAIVDKIP-----LPPR--KKQSATN 348
HG+V+ ++A + L +++P SK D + + R KK+ +
Sbjct: 536 HGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCS 595
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + S D R Y K+ L + GYVP T VLH++ + K + L
Sbjct: 596 WVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHL 655
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSERLA+++ L+ST P+RI KNLRIC DCH+ +K++S I +E++VRD +RFHHF
Sbjct: 656 YYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHF 715
Query: 465 RDGKCSCGDYW 475
+ G CSC D W
Sbjct: 716 KRGTCSCQDRW 726
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L SC +L E GK+VH + ++ D + L++MY K A FD+L
Sbjct: 255 TFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRL 314
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ SW ++ISGYA Q + F QM++ G P++ T + C+ ++ G
Sbjct: 315 VNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENG 373
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S++L C N S+ GK +H L S D L L++MY KC A KVF ++
Sbjct: 53 TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
R ++ +W MI+G G G + LF MR+ G P++ T
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTL 155
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 32/217 (14%)
Query: 32 HSVTLKSSSPVK--LLCAYATPNPK---VYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTN 86
H++ L+S + L C+ K VY + K RNP
Sbjct: 74 HALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNP------------------ 115
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSI 144
D + +A + LD ++G +EA E ++ + A SSL+ + N+ +
Sbjct: 116 DVVAWSAMITGLD-------QQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDL 168
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
G+ +H + F D ++N LI MY K KVF+ + +L SW+ ++SG+
Sbjct: 169 RYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGF 228
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
+ G +F QM G P+ TF+ V +C+S
Sbjct: 229 YDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSS 265
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
LA ++F + ++N SW+ +++GYA G G L LF +M++ K T V CA
Sbjct: 3 LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62
Query: 241 SAEAVKEG 248
+ +++EG
Sbjct: 63 NTGSLREG 70
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 202/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E GK VH +R V L L++ Y KC + A K F+ + R
Sbjct: 378 SVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR 437
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N +W +I G A+NG+ + L LF M + P TF+ V AC+ V+EG +F
Sbjct: 438 NTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHF 497
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M DYGI P IEHY ++ +LG AG + EA +F+ MP EP VW AL + +H +
Sbjct: 498 TSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKN 557
Query: 313 VELEDRAEELLGDLDP--------------------SKAIVDK-IPLPPRKKQSATNMLE 351
VE+ + A + + LDP + A+V K + +K +++E
Sbjct: 558 VEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIE 617
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+ + ++ + D + YEK+ + ++ GY+P+T D+DE K+ ++ +H
Sbjct: 618 LEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHH 677
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL+ + P +R+ KNLR+C DCH+A K++SK+ RE+IVRD RFHHF+DG
Sbjct: 678 SEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDG 737
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 738 LCSCNDYW 745
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G +E +E A +D S+ +CG L +G+ + E ++
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L++MY KC AR++FD++ R++ +W MISGY + + + L +F +M+ T
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
+P+ T + V +ACA A++ G +++ I + D + + A++ G + +
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILG--TALVDFYAKCGCIKD 426
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A + E MP T W AL
Sbjct: 427 AVKAFESMPVRNT-WTWTAL 445
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 5/210 (2%)
Query: 97 SLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHEL 153
S ++ + S + G +A+ M D + S ++ + SC + + +G+ V
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
F+ D + N LI MY C + A +F ++ + + +W+ MI+GY NG +
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEV 256
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
+ +F+ M + D+ T L V AC G E + + G++ A++
Sbjct: 257 VEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAE-EKGMLRSRNLATALVD 315
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G L +A +RM V W A+
Sbjct: 316 MYAKCGELDKARRLFDRMHSRDVV-AWSAM 344
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 205/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++S+LD+C L ++ GK +H+ ++ DV N L+ MY KC + AR VF+
Sbjct: 231 TYTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDC 290
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N+ +W ++S Y+ GQ L +++M G PD TF +F AC+ + EG
Sbjct: 291 GLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGL 350
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
LYF M+ D+ IVP HY +I +LG G L EAEE V MP+ P V W L + ++
Sbjct: 351 LYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKV 410
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
+GD+++ RA + + +L+P + + I K +
Sbjct: 411 YGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKS 470
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
M+E + R+ ++ D L + +++ ++ Q+ AGY PDT+ VL D++EE K + L
Sbjct: 471 MIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELL 530
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSER+A+ GL+++ L I+KNLRIC DCH+ K++SK++ R+++VRD+ RFH F
Sbjct: 531 LFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIF 590
Query: 465 RDGKCSCGDYW 475
+ G CSCGDYW
Sbjct: 591 QRGSCSCGDYW 601
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 130 VFSSLLDSCGNLKS--IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ ++L SC +L +E GK +H F D+ + N LI MY KC + + A VFD
Sbjct: 31 TYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFD 90
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ +NL S+ MI Y + + L+++M G PD + A C + ++E
Sbjct: 91 KMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPT---IRE 147
Query: 248 G 248
G
Sbjct: 148 G 148
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N L+ MYG+ A+ VFD +R ++L+S++ MI+ +A G+ + L+ +M
Sbjct: 166 SNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNL 225
Query: 226 HPDKETFLVVFAACASAEAVKEG 248
P+ T+ V AC+ A+ EG
Sbjct: 226 EPNLWTYTSVLDACSKLGALTEG 248
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 212/384 (55%), Gaps = 27/384 (7%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M + A + S+L +C +L ++++G+ VH L + +V + LIEMY KC
Sbjct: 223 MSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCG 282
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ +F ++ K+N S+ +MISG A +G G +GL +F +M + G PD ++ V
Sbjct: 283 SLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLN 342
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC+ A V+EG F MK ++GI P I+HY ++ ++G AG + EA E ++ MP EP
Sbjct: 343 ACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPND 402
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA---------TN 348
+W +L + +++H +++ + A + L LD KA D + L Q+ TN
Sbjct: 403 VLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKA-SDYVVLSNMYAQAQRWEDVAKTRTN 461
Query: 349 M-------------LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYV 391
M +E K ++ + S D + YE + + Q++ GY PDT V
Sbjct: 462 MFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQV 521
Query: 392 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGR 451
L D+DEE K++ L HS++LAIAY LI T P+RI++NLR+C DCH K++S I R
Sbjct: 522 LCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDR 581
Query: 452 ELIVRDNKRFHHFRDGKCSCGDYW 475
E+ VRD RFHHF+DG CSC DYW
Sbjct: 582 EITVRDRHRFHHFKDGACSCRDYW 605
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LL +C L ++E G +VH + DV + N LI MYGKC + VF+Q+
Sbjct: 133 TYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQM 192
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV-VFAACASAEAVKEG 248
+R+++SW +I+ +A+ G +D L L M G +E+ LV V +AC A+ G
Sbjct: 193 NERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLG 252
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +F Q+ + ++ M+ G+ + + L+ +++M + G PD T+ + ACA
Sbjct: 84 ACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACAR 143
Query: 242 AEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
AV+EG ++ I+K G+ + ++I + G G + E+M E +V W
Sbjct: 144 LPAVEEGMQVHAHILK--LGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMN-ERSVASW 200
Query: 301 EALRNFAQIHGDVELEDRAEELLGDL 326
AL H + + LLGD+
Sbjct: 201 SAL---ITAHASLGMWSDCLRLLGDM 223
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 213/397 (53%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA+E + + D F S+L +C L S++ G +H+ + S +V
Sbjct: 186 QNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVV 245
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L+ M+ +C + AR VF + + N+ W MISGY +G G + + +F +M+ G
Sbjct: 246 LATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARG 305
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TF+ V +ACA A + EG F MK +YG+VPG+EH++ ++ + G G L EA
Sbjct: 306 VVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEA 365
Query: 285 EEFVERMPFEPTV-EVWEALRNFAQIHGDVELEDRAEE---------------------L 322
+FV+ + + V VW A+ ++H + +L E L
Sbjct: 366 YQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYAL 425
Query: 323 LGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
G +D +++ + + KKQ + ++ NR + D E Y + L +
Sbjct: 426 AGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWR 485
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
++AGY P +H+++ E +E AL+YHSE+LA+A+GL+ T + LRI+KNLRIC DC
Sbjct: 486 CKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDC 545
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H+AIK +S ++ RE+IVRD RFHHFR+G CSC DYW
Sbjct: 546 HSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S++ +C +L + +G VH + S + D + LI Y K C R+ARKVFD++
Sbjct: 111 FTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMP 170
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W+ MISGY NG + + +F +MR++ PD TF+ V +AC+ ++ G
Sbjct: 171 QRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCW 230
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ + GI + +++ + G + A M E V +W A+ + +H
Sbjct: 231 LHDCIVGS-GITMNVVLATSLVNMFSRCGDVGRARAVFYSM-IEGNVVLWTAMISGYGMH 288
Query: 311 G 311
G
Sbjct: 289 G 289
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 206/373 (55%), Gaps = 36/373 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C ++ + ++G ++ + + +V + N I MY KC A+K+FD
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++ SW+ MI+GY+ +G G F+ M G PD +++ V + C+ + V+E
Sbjct: 564 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G LYF++M +GI PG+EH+ ++ +LG AGHL EA++ +++MP +PT EVW AL +
Sbjct: 624 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 683
Query: 308 QIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSA 346
+IHG+ EL + A + + +LD S ++ KI KK
Sbjct: 684 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 743
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E +N+V +++ D+ + KM L ++ GYV +
Sbjct: 744 YSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPR 792
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+G++S P MP+ I+KNLRICGDCH IK++S + RE ++RD RFH
Sbjct: 793 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFH 852
Query: 463 HFRDGKCSCGDYW 475
HF+ G CSCGDYW
Sbjct: 853 HFKSGSCSCGDYW 865
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 18/283 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + +L + G+VREA+ + + D ++S L +C L S+ GK++H +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S D + + LIE+Y KC + + A++VF+ L+ RN SW ++I G + +
Sbjct: 297 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIK 273
LF QMR D+ + + C + + G L+ +K+ + + + ++I
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLIS 414
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV 333
+ G L AE M V + ++QI + +A E + AI
Sbjct: 415 LYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII----KAREFFDGMATRNAIT 470
Query: 334 DKIPLPPRKKQSA--------TNMLEEKNRVSDYRS-TDLYRG 367
L + A + ML +K+ D+ + L+RG
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 513
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC------------- 177
++L+ C N + +G+++H L S + + ++N LI +Y KC
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433
Query: 178 ------------------NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
N AR+ FD + RN +W+ M+ Y +G DGL ++
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 493
Query: 220 M-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY--GIVPGIEHYIAIIKVLG 276
M + PD T++ +F CA A K G +I+ + G++ + A I +
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLG---DQIIGHTVKAGLILNVSVANAAITMYS 550
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + EA++ + + + V W A+ HG
Sbjct: 551 KCGRISEAQKLFDLLNGKDVVS-WNAMITGYSQHG 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 101/246 (41%), Gaps = 46/246 (18%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++ SCG L E+ ++ L F D ++ L++M+ +C A ++F Q+
Sbjct: 140 TFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 199
Query: 190 RK-------------------------------RNLSSWHLMISGYAANGQGADGLMLFE 218
+ R++ SW++MI+ + +G+ + L L
Sbjct: 200 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 259
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVL 275
+M + G D T+ ACA ++ G L+ +++++ +P I+ Y+ A+I++
Sbjct: 260 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS----LPQIDPYVASALIELY 315
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE--DRAEELLGDLDPSKAIV 333
G EA+ + +V W L I G ++ E ++ EL + +
Sbjct: 316 AKCGSFKEAKRVFNSLQDRNSVS-WTVL-----IGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 334 DKIPLP 339
D+ L
Sbjct: 370 DQFALA 375
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SCG L LLR +V +N ++ Y K + A ++FD++ +R+++S
Sbjct: 51 SCGALSD------ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVAS 104
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACAS 241
W+ ++SGY + DGL F M ++G P+ TF V +C +
Sbjct: 105 WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGA 150
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 206/373 (55%), Gaps = 36/373 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C ++ + ++G ++ + + +V + N I MY KC A+K+FD
Sbjct: 494 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 553
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++ SW+ MI+GY+ +G G F+ M G PD +++ V + C+ + V+E
Sbjct: 554 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 613
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G LYF++M +GI PG+EH+ ++ +LG AGHL EA++ +++MP +PT EVW AL +
Sbjct: 614 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 673
Query: 308 QIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSA 346
+IHG+ EL + A + + +LD S ++ KI KK
Sbjct: 674 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 733
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E +N+V +++ D+ + KM L ++ GYV +
Sbjct: 734 YSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPR 782
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+G++S P MP+ I+KNLRICGDCH IK++S + RE ++RD RFH
Sbjct: 783 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFH 842
Query: 463 HFRDGKCSCGDYW 475
HF+ G CSCGDYW
Sbjct: 843 HFKSGSCSCGDYW 855
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 18/283 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + +L + G+VREA+ + + D ++S L +C L S+ GK++H +
Sbjct: 227 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 286
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S D + + LIE+Y KC + + A++VF+ L+ RN SW ++I G + +
Sbjct: 287 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 346
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIK 273
LF QMR D+ + + C + + G L+ +K+ + + + ++I
Sbjct: 347 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLIS 404
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV 333
+ G L AE M V + ++QI + +A E + AI
Sbjct: 405 LYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII----KAREFFDGMATRNAIT 460
Query: 334 DKIPLPPRKKQSA--------TNMLEEKNRVSDYRS-TDLYRG 367
L + A + ML +K+ D+ + L+RG
Sbjct: 461 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 503
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC------------- 177
++L+ C N + +G+++H L S + + ++N LI +Y KC
Sbjct: 364 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 423
Query: 178 ------------------NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
N AR+ FD + RN +W+ M+ Y +G DGL ++
Sbjct: 424 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 483
Query: 220 M-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY--GIVPGIEHYIAIIKVLG 276
M + PD T++ +F CA A K G +I+ + G++ + A I +
Sbjct: 484 MLSQKDVTPDWVTYVTLFRGCADIGANKLG---DQIIGHTVKAGLILNVSVANAAITMYS 540
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + EA++ + + + V W A+ HG
Sbjct: 541 KCGRISEAQKLFDLLNGKDVVS-WNAMITGYSQHG 574
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 46/238 (19%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK----- 191
SCG L E+ ++ L F D ++ L++M+ +C A ++F Q+ +
Sbjct: 137 SCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFC 196
Query: 192 --------------------------RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
R++ SW++MI+ + +G+ + L L +M + G
Sbjct: 197 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 256
Query: 226 HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLI 282
D T+ ACA ++ G L+ +++++ +P I+ Y+ A+I++ G
Sbjct: 257 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS----LPQIDPYVASALIELYAKCGSFK 312
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE--DRAEELLGDLDPSKAIVDKIPL 338
EA+ + +V W L I G ++ E ++ EL + +D+ L
Sbjct: 313 EAKRVFNSLQDRNSVS-WTVL-----IGGSLQYECFSKSVELFNQMRAELMAIDQFAL 364
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF-DQLRKRN 193
L SCG+ ++ + +H L T V L N L+ Y C AR++ +++ N
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQM 220
+ + ++M++GYA G +D LF++M
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRM 113
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 205/371 (55%), Gaps = 42/371 (11%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SS+L +C + +E+G+ +H + + + + + L++MYGKC + + FD++
Sbjct: 234 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 293
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++NL + + +I GYA GQ L LFE+M G C AV+ G
Sbjct: 294 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG--------------CG---AVENGM 336
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M++ YGI PG EHY I+ +LG AG + A EF+++MP +PT+ VW AL+N ++
Sbjct: 337 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 396
Query: 310 HGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATN 348
HG +L A E L LDP + + +++ KK + +
Sbjct: 397 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 456
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+ KN+V +++ D L + + L +M AGY PD + L+D++EE K +
Sbjct: 457 WITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEV 516
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LA+A+GL+S P +P+RI KNLRICGDCH+ K +S V RE+IVRDN RFH F
Sbjct: 517 SHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRF 576
Query: 465 RDGKCSCGDYW 475
+DG CSC DYW
Sbjct: 577 KDGICSCKDYW 587
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-- 181
++A + F ++ +L+ GK++H L + DV + +MY C TRL
Sbjct: 40 STALVEFFEMRREAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY---CKTRLRD 96
Query: 182 -ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
ARK+FD++ +RNL +W+ IS +G+ + + F + R+ HP+ TF AC+
Sbjct: 97 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 156
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 196/366 (53%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L + L +E GK VHE+++ V L LI+MY KC + A++VFD + +R++
Sbjct: 272 LSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDV 331
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ MI G A +G G D + LFE+ G P TF+ V AC+ V EG YF++
Sbjct: 332 FAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKL 391
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M Y I +EHY ++ +L AG + EA E +E M P +W + + + HG V+
Sbjct: 392 MAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVD 451
Query: 315 LEDRAEELLGDLDPSK----AIVDKIPLPPRK-----------------KQSATNMLEEK 353
L L +LDP+ ++ I +K K + +++E
Sbjct: 452 LGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAH 511
Query: 354 NRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
V + D+ + Y + +N ++ EAGYVPD VLHDI +E K A++ HSE
Sbjct: 512 GIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHSE 571
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
RLAIAYG I P+RI+KNL +CGDCH K+++K+ GRE++VRD RFHH +DGKC
Sbjct: 572 RLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRDGSRFHHMKDGKC 631
Query: 470 SCGDYW 475
SC DYW
Sbjct: 632 SCHDYW 637
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG++ + M K EL V+DV N ++ Y + +AR+VFD + R+ SW
Sbjct: 180 CGDVAA--MRKVFDEL----PIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSW 233
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKN 257
+I GY G+ L +F+ M G ++ + +A A +++G E++K
Sbjct: 234 STVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKR 293
Query: 258 DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G+ + A+I + G + A+E + MP V W ++ HG
Sbjct: 294 -VGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMP-RRDVFAWNSMICGLATHG 345
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ +GK VH ++ ++D + L++MY K ++++F++L
Sbjct: 622 ASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNG 681
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ ++SW++MI+G+ +GQG + LFE M+++ PD+ TFL V AC A V EG Y
Sbjct: 682 KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNY 741
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
M+ Y + P +EHY +I +LG AG L EA F+ MP EP ++W +L + + +
Sbjct: 742 LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYV 801
Query: 312 DVEL-EDRAEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATNML 350
D+E+ E AE+LL G D + + K+ +K + +
Sbjct: 802 DLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861
Query: 351 EEKNRVSDY---RSTDLYRGEYEKMKG-LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + +V + +++ E KM L Q+ E GY PD VLH+++E K K L+
Sbjct: 862 ELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKG 921
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE++AI +G ++T LRI KNLRIC DCHNA K +SK RE+++RDNKRFHHF+
Sbjct: 922 HSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKK 981
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 982 GICSCGDYW 990
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV------FSSL 134
H + +P+ + LE + LC+ G + A++++ + +AGYD+ L
Sbjct: 58 HQSRSVNPVSQLSLLEEIS----KLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGML 113
Query: 135 LDSCGNLKSIEMGKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L CG K++E+G+++ E+L S+ F D LN +LI MY C +R VFD+L +N
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 194 LSSWHLMISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
L W+ ++SGY N + + F E + T PD TF + AC + G
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG-KSV 232
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
M G++ + A+I + G G L EA E ++MP E + W +L R F++
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLIRGFSE 288
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L+ +C I +GK VH + + D+ + N +I +YGKC A ++FD++
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKEG 248
++NL SW+ +I G++ NG + F + ++G PD T + + C+ V G
Sbjct: 273 EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG 332
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ M G+V + A+I + G L EA ++ + V W ++
Sbjct: 333 -MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS-WNSM 385
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D FS SLL +CG L ++ GK +H + + + + L+ +Y C R F
Sbjct: 516 DDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYF 575
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+ + +N W+ M+SGY+ N + L LF QM G PD+ + AC+ A+
Sbjct: 576 ETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALG 635
Query: 247 EG 248
G
Sbjct: 636 LG 637
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
LR S K++ +NN I Y KC + A VF + +++SSW+ +I G+A NG
Sbjct: 443 LRHSFQYKEL-INNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L + +M + G PD + + + AC ++ G
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG 536
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+LL C ++++G +H + V ++ + N LI+MY KC A +F ++ +
Sbjct: 318 TLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENK 377
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQ--MRKTGPHPDKETFLVVFAACAS--------- 241
++ SW+ MI Y+ G + L + M + ++ T L + AC
Sbjct: 378 SVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRA 437
Query: 242 --AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+++ F Y E++ N A I G L+ AE M +V
Sbjct: 438 LHGYSLRHSFQYKELINN------------AFIAAYAKCGSLVFAEHVFFGMN-TKSVSS 484
Query: 300 WEALRNFAQIHGD 312
W A+ +GD
Sbjct: 485 WNAVIGGHAQNGD 497
>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 199/368 (54%), Gaps = 26/368 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + L S+ GK +H L F + + + L++MY C + A KVFD+ + ++
Sbjct: 16 ILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKD 75
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W MI+ +G G + +F++M +TG PD +FL + AC+ ++ V EG Y +
Sbjct: 76 VVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLD 135
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
+M + Y + P EHY ++ +LG +G EA +F++ MP EP VW AL +IH +
Sbjct: 136 MMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNH 195
Query: 314 ELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNMLEE 352
EL A + L +L+P K I K+ +K A + +E
Sbjct: 196 ELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEI 255
Query: 353 KNRVSDYRSTDLYRGEYE----KMKGLNGQMREAG-YVPDTRYVLHDIDEEAKEKALQYH 407
N V + + D + + K+ + ++R G YV DT +VLHD+ EE K L H
Sbjct: 256 GNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRH 315
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SERLAI++GLIST PLRI KNLR+CGDCH K++SK+ RE++VRD RFHHF G
Sbjct: 316 SERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGG 375
Query: 468 KCSCGDYW 475
CSCGD+W
Sbjct: 376 TCSCGDFW 383
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 215/406 (52%), Gaps = 27/406 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELL 154
S + + + G A+EY DV F S + C +L ++ G++VH +
Sbjct: 242 SFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQV 301
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
+ K V + L+ MY +C + +V+D +L MIS +GQG +
Sbjct: 302 IKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAV 361
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKV 274
LF+QM G P++ TFL + AC+ + EG +FE+M YG P ++HY I+ +
Sbjct: 362 ELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDL 421
Query: 275 LGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--- 331
LG +G L EAE + MP +W+ L + + + ++ +R E + + DP +
Sbjct: 422 LGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPY 481
Query: 332 -IVDKIPLPPRK-----------------KQSATNMLEEKNRVSDYRSTDLY---RGEY- 369
++ I ++ K+ + +E K +V + + D +GE
Sbjct: 482 VLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEID 541
Query: 370 EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRII 429
E +K + G++R+ GY PD V HD+++E KE +L +HSE+LAIA+ ++ P +P+R++
Sbjct: 542 EYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVM 601
Query: 430 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
KNLR+C DCH AIK++S++ GRE++VRD RFHHFRDG+CSCGDYW
Sbjct: 602 KNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 45/183 (24%)
Query: 102 LLSLCKEGKVREAIEY-----MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRT 156
+ LC G++++A+ + + DAS +FS + +C ++I + +++H T
Sbjct: 20 FIRLCSSGRLKDALHHPFRGVLWSDAS------LFSHIFRAC---RAIPLLRQLHAFAAT 70
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ------- 209
S D N L+ Y + AR +F+ + KRN+ SW+++I G NG
Sbjct: 71 SGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSAREL 130
Query: 210 ------------------------GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
D L F MR+ G HPD+ VF CA V
Sbjct: 131 FDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDV 190
Query: 246 KEG 248
G
Sbjct: 191 VSG 193
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 2/151 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+ C L + G++VH + S D+ + N L MY +C V L
Sbjct: 177 LGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALP 236
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+ S++ I+G NG L F MR PD TF+ + C+ A+ +G
Sbjct: 237 SLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQ 296
Query: 250 LYFEIMKNDYG-IVPGIEHYIAIIKVLGSAG 279
++ +++K +VP I + + G G
Sbjct: 297 VHAQVIKAGVDKVVPVITSLVHMYSRCGCLG 327
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +C L ++ +GK VH ++ ++D + L++MY K ++++F++L
Sbjct: 622 ASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNG 681
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ ++SW++MI+G+ +GQG + LFE M+++ PD+ TFL V AC A V EG Y
Sbjct: 682 KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNY 741
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
M+ Y + P +EHY +I +LG AG L EA F+ MP EP ++W +L + + +
Sbjct: 742 LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYV 801
Query: 312 DVEL-EDRAEELL--------------------GDLDPSKAIVDKIPLPPRKKQSATNML 350
D+E+ E AE+LL G D + + K+ +K + +
Sbjct: 802 DLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861
Query: 351 EEKNRVSDY---RSTDLYRGEYEKMKG-LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + +V + +++ E KM L Q+ E GY PD VLH+++E K K L+
Sbjct: 862 ELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKG 921
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE++AI +G ++T LRI KNLRIC DCHNA K +SK RE+++RDNKRFHHF+
Sbjct: 922 HSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKK 981
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 982 GICSCGDYW 990
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDV------FSSL 134
H + +P+ + LE + LC+ G + A++++ + +AGYD+ L
Sbjct: 58 HQSRSVNPVSQLSLLEEIS----KLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGML 113
Query: 135 LDSCGNLKSIEMGKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L CG K++E+G+++ E+L S+ F D LN +LI MY C +R VFD+L +N
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 194 LSSWHLMISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
L W+ ++SGY N + + F E + T PD TF + AC + G
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG-KSV 232
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFAQ 308
M G++ + A+I + G G L EA E ++MP E + W +L R F++
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLIRGFSE 288
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L+ +C I +GK VH + + D+ + N +I +YGKC A ++FD++
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKEG 248
++NL SW+ +I G++ NG + F + ++G PD T + + C+ V G
Sbjct: 273 EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG 332
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ M G+V + A+I + G L EA ++ + V W ++
Sbjct: 333 -MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS-WNSM 385
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D FS SLL +CG L ++ GK +H + + + + L+ +Y C R F
Sbjct: 516 DDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYF 575
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
+++ +N W+ M+SGY+ N + L LF QM G PD+ + AC+ A+
Sbjct: 576 ERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALG 635
Query: 247 EG 248
G
Sbjct: 636 LG 637
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
LR S K++ +NN I Y KC + A VF + +++SSW+ +I G+A NG
Sbjct: 443 LRHSFQYKEL-INNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L + +M + G PD + + + AC ++ G
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG 536
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+LL C ++++G +H + V ++ + N LI+MY KC A +F ++ +
Sbjct: 318 TLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENK 377
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQ--MRKTGPHPDKETFLVVFAACAS--------- 241
++ SW+ MI Y+ G + L + M + ++ T L + AC
Sbjct: 378 SVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRA 437
Query: 242 --AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+++ F Y E++ N A I G L+ AE M +V
Sbjct: 438 LHGYSLRHSFQYKELINN------------AFIAAYAKCGSLVFAEHVFFGMN-TKSVSS 484
Query: 300 WEALRNFAQIHGD 312
W A+ +GD
Sbjct: 485 WNAVIGGHAQNGD 497
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 208/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+LD+ ++ ++E+GK +H + + + + N L+ MYGKC + AR VFD +
Sbjct: 246 YVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMV 305
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW+ M++ Y NG+ + L LF+ M G P+ TF+ + C+ + K+
Sbjct: 306 EKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS 365
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M+ D+GI P H+ +I +LG +G L EAEE ++ MP +W +L H
Sbjct: 366 HFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425
Query: 311 -----------GDVELEDR---AEELLGDL-------DPSKAIVDKIPLPPRKKQSATNM 349
+ E R A +L +L D + + ++ +KQ+ +
Sbjct: 426 KDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSW 485
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +V ++ + D + ++ ++ L +MR GY PD + V+H ++EE K++ L
Sbjct: 486 IEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLF 545
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+A+G+ STPPR PL I+KNLR+C DCH+AIK +S + GR + VRD+ RFHHF
Sbjct: 546 YHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFD 605
Query: 466 DGKCSCGDYW 475
G+CSCGDYW
Sbjct: 606 RGECSCGDYW 615
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 111 VREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
+REA++ + Q +A D+ L+ C K++E G+R+H + + + L+N L+
Sbjct: 25 IREAVDLLEQSGAAGGTGDL-EQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLV 83
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MYGKC + A++VFD ++ +N+ SW ++++G+ +G+G + + LF +M + G PD+
Sbjct: 84 DMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRV 143
Query: 231 TFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
L +C +A+A+ +G G+ + AII + G G + EA R
Sbjct: 144 ALLKFIDSCGAAKALSQG-REIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTR 202
Query: 291 MPFEPTVEVWEAL 303
MP E V W +
Sbjct: 203 MP-EKNVISWSTM 214
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+DSCG K++ G+ +H + D+ N +I MYGKC + A VF ++ ++N
Sbjct: 148 FIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKN 207
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYF 252
+ SW MI+ + N + L+ F+ M++ G D+ T++ V A S A++ G L+
Sbjct: 208 VISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHV 267
Query: 253 EIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
I+ D IV G ++ + G G +A + + M E V W A+
Sbjct: 268 RIVYAGLDTSIVVG----NTLVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAM 315
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 204/369 (55%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
++++ +C N +E GK++H ++ D + + LI+MY K + A +F+Q+++
Sbjct: 387 ATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE 446
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
N+ W MISG A +GQG + + LFE M G P++ TF+ V AC+ ++EG Y
Sbjct: 447 PNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRY 506
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F +MK+ Y I P +EHY +++ + G AGHLIEA+ F+ VW + + ++H
Sbjct: 507 FRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHK 566
Query: 312 DVELEDRAEELLGDLDPS-------------------KAIVDKIPLPPR--KKQSATNML 350
+ + E+L PS +A + + + R KKQ + +
Sbjct: 567 NFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWV 626
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ K+++ + D + Y + L G+++E GY D + V+ D++EE E + +
Sbjct: 627 QLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISH 686
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+ + +I+T PR P+RI+KNLRIC DCHN K S+++ RE+IVRD RFHHF+
Sbjct: 687 HSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQ 746
Query: 467 GKCSCGDYW 475
CSCG+YW
Sbjct: 747 SSCSCGEYW 755
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC-----CNTRLARKV 185
FS L +L +E+G+++H + T D + + L+EMYGKC +T L
Sbjct: 269 FSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP 328
Query: 186 FDQLRKRNLS-----------SWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
+ LRK N SW M+SGY NG+ DG+ F M D T
Sbjct: 329 LNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVAT 388
Query: 235 VFAACASAEAVKEGFLYFEIMKNDYGIVPG--IEHYI--AIIKVLGSAGHLIEAEEFVER 290
+ +ACA+A G L F + Y G I+ Y+ ++I + +G L +A E+
Sbjct: 389 IISACANA-----GILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ 443
Query: 291 MPFEPTVEVWEALRNFAQIHG 311
+ EP V +W ++ + +HG
Sbjct: 444 IK-EPNVVLWTSMISGCALHG 463
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA-ANGQGADGLMLFEQMRKTGP 225
N L+ +Y K N A K+FD++ +N +W ++ISG+A A G LF +M+ G
Sbjct: 71 NYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGA 130
Query: 226 HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T V C+ ++ G ++ I++N G +E+ +I+ + A
Sbjct: 131 CPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN--SILDLYLKCKEFEYA 188
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV 333
E F E M E V W + GDVE ++ E+ + P+K +V
Sbjct: 189 ESFFELM-IEKDVVSWNIMIGAYLREGDVE---KSLEMFRNF-PNKDVV 232
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M D + Y + SS+L C +I+ GK +H + + DV L N ++++Y KC
Sbjct: 125 MQADGACPNQYTL-SSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCK 183
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
A F+ + ++++ SW++MI Y G L +F
Sbjct: 184 EFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMF 223
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 199/370 (53%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+LL C L + GK +H A D+ + + L++MY KC L+R VFD+L KR
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGFLY 251
N+ +W+++I Y +G G + + LF++M + P++ TF+ AAC+ + V G
Sbjct: 560 NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMEL 619
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM-PFEPTVEVWEALRNFAQIH 310
F MK ++G+ P + + + +LG AG L EA + M P E V W + ++H
Sbjct: 620 FHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLH 679
Query: 311 GDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNM 349
+V L + A E L L+P +A + +++ K+ +
Sbjct: 680 RNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSW 739
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + + + E + M L +MR GY PDT VLHDI+E K L+
Sbjct: 740 IELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILR 799
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAIA+GL+ TPP +R+ KNLR+C DCH A K +S++VGRE+++RD +RFHHF
Sbjct: 800 YHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFV 859
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 860 DGACSCGDYW 869
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 82 SQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCG 139
S +T D G + V+LL + G+ EAIE + + D F+S L +C
Sbjct: 225 SVDTTDSPGGGVVTWNTMVSLL--VQSGRCGEAIEVIYDMVARGVRPDGITFASALPACS 282
Query: 140 NLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSS 196
L+ + +G+ +H +L+ S + + + L++MY +AR+VFD + R L
Sbjct: 283 QLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGL 342
Query: 197 WHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAE 243
W+ M+ GYA G + L LF +M + G P + T V ACA +E
Sbjct: 343 WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSE 390
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
G+ QL + + + G EA+E M +A + +L +C ++
Sbjct: 336 GHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGK 395
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+ VH + + + N L+++Y + + AR +F + R++ SW+ +I+G
Sbjct: 396 EAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQ 455
Query: 208 GQGADGLMLFEQMRKTGPHPDKET 231
G D L +M++ G D T
Sbjct: 456 GHIHDAFQLVREMQQQGRFTDATT 479
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 210/372 (56%), Gaps = 31/372 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDV----ELNNKLIEMYGKCCNTRLARKVFDQ 188
S+L +C +L +I++G+ +H + +KDV L LI+MY KC + A +VF+
Sbjct: 304 SILPACAHLGAIDIGRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNS 361
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ ++LSSW+ MI G+A +G+ G LF +MRK G PD TF+ + +AC+ + + G
Sbjct: 362 MLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLG 421
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
F+ M DY I P +EHY +I +LG +G EA+E ++ MP EP +W +L +
Sbjct: 422 RHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACR 481
Query: 309 IHGDVEL-EDRAEELL--------------------GDLDPSKAIVDKIPLPPRKKQSAT 347
HG++EL E A L+ G+ D + + KK
Sbjct: 482 RHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGC 541
Query: 348 NMLEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E + V ++ D R Y ++ + + EAG+VPDT VL +++EE KE A
Sbjct: 542 SSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGA 601
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L++HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHH
Sbjct: 602 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHH 661
Query: 464 FRDGKCSCGDYW 475
FRDG CSC D+W
Sbjct: 662 FRDGVCSCNDFW 673
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D ++L +C +S+E+G++VH + F ++++
Sbjct: 177 GSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIV 236
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI++Y KC A +F+ L +++ SW+ +I GY + L+LF++M ++G
Sbjct: 237 NALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES 296
Query: 227 PDKETFLVVFAACASAEAVKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P+ T + + ACA A+ G +Y + D P + ++I + G +
Sbjct: 297 PNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEA 354
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + M ++ W A+ +HG
Sbjct: 355 AHQVFNSM-LHKSLSSWNAMIFGFAMHG 381
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 33/205 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK-------------- 175
F LL SC K+ E G+++H + + D+ ++ LI MY +
Sbjct: 68 TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127
Query: 176 -----------------CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
N R A+++FD++ +++ SW+ MISGYA G + L LF+
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSA 278
+M KT PD+ T + V +ACA + +V+ G + +D+G ++ A+I +
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWI-DDHGFGSNLKIVNALIDLYSKC 246
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G + A E + + V W L
Sbjct: 247 GQVETACGLFEGLSCKDVVS-WNTL 270
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A VF +++ N W+ M+ GYA + L L+ M G P+ TF + +CA
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
++A +EG ++ ++K G P + + ++I + G L +A + +R V
Sbjct: 79 SKAFEEGQQIHGHVLK--LGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136
Query: 301 EALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR 360
+ +A G++ ++ + D+IP+ +++ +S Y
Sbjct: 137 ALITGYASS--------------GNIRSAQEMFDEIPV--------KDVVSWNAMISGYA 174
Query: 361 STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
T Y+ E K +M + PD ++ + A+ ++++
Sbjct: 175 ETGSYKEALELFK----EMMKTNVRPDEGTMVTVLSACAQSRSVE 215
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 214/394 (54%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK +EA+ + +A D S L +C +L ++ GK +H ++ D L
Sbjct: 229 GKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC + A +VF ++ ++ +S W MISGYA +G+G + L F +M+ G
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P++ TF + AC+ A V E L FE M+ +G P IEHY ++ +LG AG L EAEE
Sbjct: 349 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------------- 331
+E MP +P +W AL N IHG++EL + ++L +DP
Sbjct: 409 LIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 468
Query: 332 ------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQ----MRE 381
+ ++ K +++ ++ + D + +++ + Q +RE
Sbjct: 469 WNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLRE 528
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GY P +L D++++ KE A+ +HSE+LA+ +GLIST P M +RI+KNLR+C DCH
Sbjct: 529 EGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTV 588
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++SK+ RE+++RD RFH F+DG C+CGDYW
Sbjct: 589 IKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+D N +I+ Y KC +A ++F+ + +RN+ SW MISG G+ + L LF +M
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ G D + ACA + +G +++ I K++ I P + +I + G
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG--CVLIDMYAKCG 299
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
L EA E +M E V VW A+ + IHG
Sbjct: 300 DLEEAIEVFRKME-EKGVSVWTAMISGYAIHG 330
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA--RKVFDQLRK 191
LL C N++ + +++H + + + D +KL+ + LA R VFD++ +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG-F 249
N W+ MI GY+ + + + L+L+ M + PH + TF + AC+S A +E
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSASEETQQ 139
Query: 250 LYFEIMKNDYG 260
++ I+K +G
Sbjct: 140 IHAHIIKMGFG 150
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 201/367 (54%), Gaps = 26/367 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L + L + E G+ +H ++ S V+ + + LI+MY KC + A VF+ + ++
Sbjct: 269 LSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKD 328
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ MI+GYA +G L +F Q+R G P TF+ + AC+ + V EG +F+
Sbjct: 329 IVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQ 388
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M+ +Y IVP IEHY ++ +LG AG + EA V+ M P +W +L ++H ++
Sbjct: 389 SMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNM 448
Query: 314 ELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
L + + L G+ + + + +K+ + +E
Sbjct: 449 ALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEV 508
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+V ++ + D+ Y ++ +NG ++E G+VP T VLHD+DE KEKAL HS
Sbjct: 509 GRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHS 568
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GLIST P ++I+KNLR C DCH +K++SKI GR+++ RD RFHHF DG
Sbjct: 569 EKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGS 628
Query: 469 CSCGDYW 475
C+CGDYW
Sbjct: 629 CTCGDYW 635
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
++ Y K AR++FD + ++ W+ MI GY +G+ + L LF M ++G
Sbjct: 200 TAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 259
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD+ ++ +A A + G +KN + A+I + G L +A
Sbjct: 260 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVS 319
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGD 312
+ + + VW A+ N +HGD
Sbjct: 320 VFNSIG-DKDIVVWNAMINGYAMHGD 344
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 201/367 (54%), Gaps = 26/367 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L + L + E G+ +H ++ S V+ + + LI+MY KC + A VF+ + ++
Sbjct: 268 LSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKD 327
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ W+ MI+GYA +G L +F Q+R G P TF+ + AC+ + V EG +F+
Sbjct: 328 IVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQ 387
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M+ +Y IVP IEHY ++ +LG AG + EA V+ M P +W +L ++H ++
Sbjct: 388 SMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNM 447
Query: 314 ELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLEE 352
L + + L G+ + + + +K+ + +E
Sbjct: 448 ALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEV 507
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+V ++ + D+ Y ++ +NG ++E G+VP T VLHD+DE KEKAL HS
Sbjct: 508 GRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHS 567
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GLIST P ++I+KNLR C DCH +K++SKI GR+++ RD RFHHF DG
Sbjct: 568 EKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGS 627
Query: 469 CSCGDYW 475
C+CGDYW
Sbjct: 628 CTCGDYW 634
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
++ Y K AR++FD + ++ W+ MI GY +G+ + L LF M ++G
Sbjct: 199 TAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 258
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
PD+ ++ +A A + G +KN + A+I + G L +A
Sbjct: 259 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVS 318
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGD 312
+ + + VW A+ N +HGD
Sbjct: 319 VFNSIG-DKDIVVWNAMINGYAMHGD 343
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 202/373 (54%), Gaps = 36/373 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C ++ + ++G ++ + D + N +I MY KC ARK FD
Sbjct: 525 WVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFD 584
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++L SW+ MI+GY+ +G G + +F+ + G PD +++ V + C+ + V+E
Sbjct: 585 FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEE 644
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G YF++MK D+ I PG+EH+ ++ +LG AGHLIEA+ ++ MP +PT EVW AL +
Sbjct: 645 GKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSAC 704
Query: 308 QIHGDVELEDRAEELLGDLDP--------------------SKAIVDKIPLPPR-KKQSA 346
+ HG+ +L + A + L DLD A V K+ KK
Sbjct: 705 KTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPG 764
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E NRV +++ D+ + EK+ L ++ GYV +
Sbjct: 765 YSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYV-----------RTESPR 813
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+G++S P MP+ I+KNLRIC DCH IK++S + RE ++RD RFH
Sbjct: 814 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFH 873
Query: 463 HFRDGKCSCGDYW 475
HF+ G CSC DYW
Sbjct: 874 HFKGGSCSCMDYW 886
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 20/284 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVH-EL 153
S ++ + +L K G+VREA++ + D ++S L +C L S+E GK++H ++
Sbjct: 258 SWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQV 317
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+R + D + + ++E+Y KC + A++VF LR RN SW ++I G+ G ++
Sbjct: 318 IRNLPHI-DPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSES 376
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAII 272
+ LF QMR D+ + + C + + G L+ +K+ + + + ++I
Sbjct: 377 VELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN--SLI 434
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI 332
+ G+L AE M V + ++Q+ G++ +A E D+ I
Sbjct: 435 SMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQV-GNIA---KAREFFDDMSTRNVI 490
Query: 333 VDKIPLPPRKKQSA--------TNMLEEKNRVSDYRS-TDLYRG 367
L + A ++ML EK+ + D+ + L+RG
Sbjct: 491 TWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 43/254 (16%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G E++E Q + D F+ +L+ C N I +G ++H L S + V ++
Sbjct: 371 GCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVS 430
Query: 167 NKLIEMYGKCCNTR-------------------------------LARKVFDQLRKRNLS 195
N LI MY KC N + AR+ FD + RN+
Sbjct: 431 NSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVI 490
Query: 196 SWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ M+ Y +G DGL ++ M + PD T++ +F CA A K G +I
Sbjct: 491 TWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLG---DQI 547
Query: 255 MKND--YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ + G++ A+I + G + EA + + + + V W A+ HG
Sbjct: 548 IGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVS-WNAMITGYSQHG- 605
Query: 313 VELEDRAEELLGDL 326
+ +A E+ D+
Sbjct: 606 --MGKQAIEIFDDI 617
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SCG L LLR +V +N ++ Y K + A ++F ++ R+++S
Sbjct: 72 SCGALSD------ARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVAS 125
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACAS 241
W+ ++SGY +GQ + L +F MR+TG P+ TF V +C +
Sbjct: 126 WNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGA 171
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A ++F + +R++ SW+++IS + +G+ + L + M G
Sbjct: 229 NSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVR 288
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIE 283
PD T+ ACA +++ G L+ ++++N +P I+ Y+ A++++ G E
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQLHVQVIRN----LPHIDPYVASAMVELYAKCGCFKE 344
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A+ + +V W L
Sbjct: 345 AKRVFSSLRDRNSVS-WTVL 363
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 206/369 (55%), Gaps = 27/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C L ++E GK VH +R L L++ Y KC A + F+ + +
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N +W +I G A NG+G + L LF MR+ G P TF+ V AC+ + V+EG +F
Sbjct: 387 NSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHF 446
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M DYGI P +EHY ++ +LG AG + EA +F+ MP EP +W AL + +H +
Sbjct: 447 DSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRN 506
Query: 313 VELEDRAEELLGDLDPS--------------------KAIVDKIPLPPR--KKQSATNML 350
V + + A + + L+PS A+V K + R +K +++
Sbjct: 507 VGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRK-EMKDRGIEKTPGCSLI 565
Query: 351 EEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E V ++ + D R Y+K++ + G+++ AGYVP+T V +++E KE ++ +
Sbjct: 566 ELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSH 625
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GL+ P +R+ KNLR+C DCH+A K++SK+ RE++VRD FHHF+D
Sbjct: 626 HSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKD 685
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 686 GTCSCNDYW 694
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 107 KEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G E +E +D S++ +CG + ++GK V + ++ +
Sbjct: 198 KNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPK 257
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L L++MY KC AR++FD ++ R++ +W MISGY Q + L LF +M+
Sbjct: 258 LVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLAR 317
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P+ T + V +ACA A++ G +++ + + + + A++ G + +
Sbjct: 318 VEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG--TALVDFYAKCGCIDD 375
Query: 284 AEEFVERMPFEPTVEVWEAL 303
A E E MP + + W AL
Sbjct: 376 AVEAFESMPVKNS-WTWTAL 394
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%)
Query: 115 IEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG 174
IE + ++ A + L SC + ++++G+ V V D + + LI MY
Sbjct: 107 IEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYA 166
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
C + AR VFD + + W+ +++ Y NG + + +F+ M + G D+ T +
Sbjct: 167 SCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVS 226
Query: 235 VFAACASAEAVKEG 248
V AC K G
Sbjct: 227 VVTACGRIGDAKLG 240
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 207/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C + ++E+G+ +H ++ + + + LI MY KC + +R+VF+ + KR
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W MI G A +G G + + +F +M++ P+ TF VF AC+ V E F
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+++YGIVP +HY I+ VLG +G+L +A +F+E MP P+ VW AL +IH +
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Query: 313 VELEDRAEELLGDLDP----SKAIVDKI-----------------PLPPRKKQSATNMLE 351
+ L + A L +L+P + ++ I + KK+ + +E
Sbjct: 550 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDI-DEEAKEKALQY 406
+ ++ S D + Y K+ + +++ GY P+ VL I +EE KE++L
Sbjct: 610 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNL 669
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAI YGLIST +R+IKNLR+CGDCH+ K++S++ RE+IVRD RFHHFR+
Sbjct: 670 HSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 729
Query: 467 GKCSCGDYW 475
G+CSC D+W
Sbjct: 730 GQCSCNDFW 738
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L+ + + S+ +G+ +H + SA DV + N LI Y C + A KVF +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++++ SW+ MI+G+ G L LF++M T + V +ACA ++ G
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 126 AGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
A + +L +C ++++E G++V + + ++ L N +++MY KC + A+++
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 186 FDQLRKRNLSSWHLMISGYA-------------------------------ANGQGADGL 214
FD + +++ +W M+ GYA NG+ + L
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 215 MLFEQMR-KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
++F +++ + ++ T + +ACA A++ G +K +GI A+I
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIH 408
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ G L ++ E + + V VW A+ +HG
Sbjct: 409 MYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQL 189
SL++ C +L+ + K+ H ++RT F D +KL M L ARKVFD++
Sbjct: 35 SLIERCVSLRQL---KQTHGHMIRTGTF-SDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG 248
K N +W+ +I YA+ + F M ++ +P+K TF + A A ++ G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 207/371 (55%), Gaps = 31/371 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+ +C L ++ +GK H + + +D + +I+MY K + +RKVFD L+ +
Sbjct: 557 SVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDK 616
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N++SW+ +I + +G G + + L+E+M+K G PD+ T++ + AC A V+EG YF
Sbjct: 617 NVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYF 676
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+N I P +EHY +I +L AG L +A V MP E +W +L + G
Sbjct: 677 KEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGA 736
Query: 313 VELEDRAEELLGDLDPSKA------------------------IVDKIPLPPRKKQSATN 348
+E+ ++ + L +L+P KA ++ +I L +K + +
Sbjct: 737 LEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGL---QKDAGCS 793
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKMK----GLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E RV + D + + +++ L ++ E GY P+T VLH++ EE K L
Sbjct: 794 WIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDIL 853
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+ HSE+LAI++GL+ T LRI KNLRIC DCHNA K++SK V RE++VRDNKRFHHF
Sbjct: 854 RGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHF 913
Query: 465 RDGKCSCGDYW 475
RDG CSC DYW
Sbjct: 914 RDGLCSCCDYW 924
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
LL +CGN K IE G+R+H+ + S + D LN +LI+MY C + +R VFD + +
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 193 NLSSWHLMISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
NL W+ ++SGY NG D + +F + + T PD TF V AC V+ G +
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL------R 304
+ ++K G+V + A++ + G G + EA + + MP E + W ++
Sbjct: 169 HGMVIK--MGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP-ETNLVSWNSMICAFSEN 225
Query: 305 NFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
F++ D+ +E EE G L +V +P+
Sbjct: 226 GFSRDSFDLLMEMLGEE--GLLPDVVTVVTILPV 257
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S++ +CG + + +G+ +H ++ V DV + N L+ MYGKC A KVFD +
Sbjct: 149 FPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP 208
Query: 191 KRNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ NL SW+ MI ++ NG D +L E + + G PD T + + CA V G
Sbjct: 209 ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGM 268
Query: 250 ----------LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE-EFVERMPFEPTVE 298
L E+M N+ A++ + G+L EA+ FV+ V
Sbjct: 269 GIHGLAVKLGLSEEVMVNN-----------AMVYMYSKCGYLNEAQMSFVKNN--NKNVV 315
Query: 299 VWEALRNFAQIHGDV--------ELEDRAEELLGD----LDPSKAIVDKIPLPPRKK 343
W + + + GDV E++ + EE+ + L+ A +DK+ L K+
Sbjct: 316 SWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G R+A+ + Q + D F SSLL +C +LKS++ GK +H + + D
Sbjct: 428 QNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFF 487
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ Y C AR +FD+++ +NL SW+ MISGY+ NG + L LF + G
Sbjct: 488 VGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEG 547
Query: 225 PHPDKETFLVVFAACASAEAVKEG 248
+ + VF AC+ A++ G
Sbjct: 548 IQSHEIAIVSVFGACSQLSALRLG 571
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAI----EYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
N + S + + + EG V EA E Q A ++L +C + +
Sbjct: 311 NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSL 370
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K +H F + VEL+N I Y KC A KVF + + +SSW+ +I G+A N
Sbjct: 371 KELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN 429
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
G L L QM +G PD T + ACA ++++ G
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYG 470
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 214/369 (57%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S L +C L ++ +GK +H + +D L++ +I+MY KC + AR FD+L+
Sbjct: 481 TSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKA 540
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ SW +MI+GYA NG+G + + L+++M + G PD T+L + AC A +++G +
Sbjct: 541 KDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCF 600
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M+N I +EHY +I +L AG +A +E MP EP ++ ++ + +HG
Sbjct: 601 FQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHG 660
Query: 312 DVELEDRAEELLGDLDPSKA----IVDKIPLPPRK-----------------KQSATNML 350
+VEL + + L +L+P KA + + R+ K+ + +
Sbjct: 661 EVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWI 720
Query: 351 EEKNRVSDYRSTDLYRGEYEKMK----GLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ +V + + + E K++ L ++R AGY PDT +LH+++EE K +AL++
Sbjct: 721 DIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRW 780
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+ AIA+GL+ T +R+ KN+R+C DCHNA K++SK+ RE++VRD KRFHHFRD
Sbjct: 781 HSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRD 840
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 841 GLCSCGDYW 849
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 107 KEGKVREAIEYMGQDASASAGY-DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G+ AIE + +A D FS SLL +CGNLK + GK H + + KD
Sbjct: 350 QNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDS 409
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM--R 221
+ L+ +Y +C LAR +FD + +++ SW+ MI+GY+ NG + L LF +M +
Sbjct: 410 FIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSK 469
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
K G P AC+ AV+ G
Sbjct: 470 KGGHWPSLLAATSALVACSELPAVRLG 496
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 112 REAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIE 171
R+ +E +G +A+ ++L C L E G+ VH L S + ++N L++
Sbjct: 151 RDCLEDLG--GTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVD 208
Query: 172 MYGKCCNTRLARKVFDQL---RKRNLSSWHLMISGYAANGQ--GADGLMLFEQMRKTGPH 226
MY KC A F + RN+ SW++M+ GYA NG+ A GL+ QM + G
Sbjct: 209 MYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVP 268
Query: 227 PDKETFLVVFAACAS 241
D+ T L V C+
Sbjct: 269 ADEITMLSVLPVCSG 283
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+L C L + + +H ++R + + N LI YG+C A +VFD +
Sbjct: 276 SVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICS 335
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEG 248
+ +SSW+ +I +A NG+ + + LF +M G PD + + AC + + + G
Sbjct: 336 KMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHG 393
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 93 AQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGY--DVFS--SLLDSCGNLKSIEMGK 148
A L + L L + G+ +A+ + + +AS G D F+ L SC + G+
Sbjct: 28 ASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGR 83
Query: 149 RVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
+VH + D + N L+ MYG+C A KVF+ + RNL SW+ ++ AA
Sbjct: 84 QVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALM---AAV 140
Query: 208 GQGADGLMLF----EQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIV 262
GL LF E + T PD+ T + V CA+ + G ++ +K+ +
Sbjct: 141 ADPRRGLELFRDCLEDLGGTAA-PDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAA 199
Query: 263 PGIEHYIAIIKVLGSAGHLIEAE-EFVERMP 292
P + + ++ + G + +AE F+E P
Sbjct: 200 PRVSN--VLVDMYAKCGEMADAECAFLEAPP 228
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 211/384 (54%), Gaps = 27/384 (7%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M + A + S+L +C +L ++++G+ VH L + +V + LIEMY KC
Sbjct: 180 MSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCG 239
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+F ++ K+N S+ +MISG A +G G +GL +F +M + G PD ++ V
Sbjct: 240 XLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLN 299
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC+ A V+EG F MK ++GI P I+HY ++ ++G AG + EA E ++ MP EP
Sbjct: 300 ACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPND 359
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSA---------TN 348
+W +L + +++H +++ + A + L LD KA D + L Q+ TN
Sbjct: 360 VLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKA-SDYVVLSNMYAQAQRWEDVARTRTN 418
Query: 349 M-------------LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYV 391
M +E K ++ + S D + YE + + Q++ GY PDT V
Sbjct: 419 MFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQV 478
Query: 392 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGR 451
L D+DEE K++ L HS++LAIAY LI T P+RI++NLR+C DCH K++S I R
Sbjct: 479 LCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDR 538
Query: 452 ELIVRDNKRFHHFRDGKCSCGDYW 475
E+ VRD RFHHF+DG CSC DYW
Sbjct: 539 EITVRDRHRFHHFKDGACSCRDYW 562
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LL +C L ++E G +VH + DV + N LI MYGKC + VF+Q+
Sbjct: 90 TYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQM 149
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV-VFAACASAEAVKEG 248
+R+++SW +I+ +A+ G +D L L M G +E+ LV V +AC A+ G
Sbjct: 150 NERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLG 209
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +F Q+ + ++ M+ G+ + + L+ +++M + G PD T+ + ACA
Sbjct: 41 ACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACAR 100
Query: 242 AEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
AV+EG ++ I+K G+ + ++I + G G + E+M E +V W
Sbjct: 101 LPAVEEGMQVHAHILK--LGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMN-ERSVASW 157
Query: 301 EALRNFAQIHGDVELEDRAEELLGDL 326
AL H + + LLGD+
Sbjct: 158 SAL---ITAHASLGMWSDCLRLLGDM 180
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 207/370 (55%), Gaps = 27/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C L +E+G++VH + + +D+ LNN L++MY KC + A VF ++
Sbjct: 167 LTSVLRACTGLALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMV 224
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ SW MI+G A NG + L LFE M+ G P+ T + V AC+ A V+EG
Sbjct: 225 EKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLY 284
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF MK +GI PG EHY +I +LG AG L EA + + M EP W AL N ++H
Sbjct: 285 YFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVH 344
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
+V++ A + + LDP A ++ I + KK+ +
Sbjct: 345 RNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSW 404
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E ++ + RS R ++ L ++ GYVPDT +VL D++ E + +L+
Sbjct: 405 IEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLR 464
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAI +GL+S P +RI KNLRICGDCH K+++K+ R +++RD R+HHF+
Sbjct: 465 YHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQ 524
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 525 DGLCSCGDFW 534
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C L ++ +++H + DV + + LI++Y + A +VFD++
Sbjct: 69 YSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMV 125
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+L W +I+G+A N G + L LF++M++ G + T V AC ++ G
Sbjct: 126 TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQ 185
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++K D ++ A++ + G L +A RM E V W +
Sbjct: 186 VHVHVLKYDQDLILN----NALLDMYCKCGSLEDANAVFVRM-VEKDVISWSTM 234
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L N LI MY K A+ VFD++ RN+ SW MIS Y+A L M + G
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ T+ V AC +++ L+ I+K G+ + A+I V G L A
Sbjct: 62 VRPNMFTYSSVLRACDGLFNLRQ--LHCCIIK--IGLDSDVFVRSALIDVYSRWGELENA 117
Query: 285 EEFVERMPFEPTVEVWEA-LRNFAQ 308
+ M V VW + + FAQ
Sbjct: 118 LRVFDEMVTGDLV-VWSSIIAGFAQ 141
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 214/394 (54%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK +EA+ + +A D S L +C +L ++ GK +H ++ D L
Sbjct: 229 GKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+MY KC + A +VF ++ ++ +S W MISGYA +G+G + L F +M+ G
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P++ TF + AC+ A V E L FE M+ +G P IEHY ++ +LG AG L EAEE
Sbjct: 349 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------------- 331
+E MP +P +W AL N IHG++EL + ++L +DP
Sbjct: 409 LIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 468
Query: 332 ------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQ----MRE 381
+ ++ K +++ ++ + D + +++ + Q +RE
Sbjct: 469 WNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLRE 528
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GY P +L D++++ KE A+ +HSE+LA+ +GLIST P M +RI+KNLR+C DCH
Sbjct: 529 EGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTV 588
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK++SK+ RE+++RD RFH F+DG C+CGDYW
Sbjct: 589 IKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVH----------ELLRTSAFV------------------- 160
F LL +C ++ ++E +++H E+ T++ +
Sbjct: 120 TFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 161 --KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
+D N +I+ Y KC +A ++F+ + +RN+ SW MISG G+ + L LF
Sbjct: 180 DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH 239
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M+ G D + ACA + +G +++ I K++ I P + +I +
Sbjct: 240 RMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG--CVLIDMYAK 297
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G L EA E +M E V VW A+ + IHG
Sbjct: 298 CGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHG 330
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA--RKVFDQLRK 191
LL C N++ + +++H + + + D +KL+ + LA R VFD++ +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG-F 249
N W+ MI GY+ + + + L+L+ M + PH + TF + AC+S A++E
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSALEETQQ 139
Query: 250 LYFEIMKNDYG 260
++ I+K +G
Sbjct: 140 IHAHIIKMGFG 150
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 207/368 (56%), Gaps = 29/368 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRN 193
L +C L + G+++H ++ F + ++ N +I+MY KC A VF+ + +++
Sbjct: 213 LSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKD 272
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W+ MI +A +G+G L LFE+M ++G PD ++L V AC V+EGF F
Sbjct: 273 IVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFN 332
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M+N G+ P ++HY +++ +LG AG L EA + V MP P + +W+ L ++ H +V
Sbjct: 333 SMEN-CGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNV 391
Query: 314 ELEDRAEELLGDLDPSKAIVDKIPL----PPRKKQSATNMLEEKNRVSDYR--------- 360
E+ + L ++ S D + L R++ + + E + D +
Sbjct: 392 EIAETVSRKLVEMG-SNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIE 450
Query: 361 -------------STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
S + +R Y K+ + +++E GYV +T +VLHDI EE KE L +H
Sbjct: 451 GNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHH 510
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLIST P+++IKNLRICGDCH IK++SKI RE+IVRD RFH F++G
Sbjct: 511 SEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEG 570
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 571 FCSCRDYW 578
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 49/348 (14%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S +L +C + + ++H + F+ D L L+++Y K A KVFD++ K
Sbjct: 109 SFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVK 168
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG--- 248
R+++SW+ +ISG+A + + L LF++M G P++ + L +ACA KEG
Sbjct: 169 RDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKI 228
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
Y ++ + D + +I + G + +A E M + W +
Sbjct: 229 HGYIKVERFDM----NAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFA 284
Query: 309 IHGDVELEDRAEELLGDLDPSKAIVDKIP-LPPRKKQSATNMLEEKNRVSDYRSTDLYRG 367
+HG+ +A EL +D S D + L + ++EE R
Sbjct: 285 MHGE---GCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFR------------ 329
Query: 368 EYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMP-L 426
L M G P+ ++ +D L + RL AY ++++ P +P +
Sbjct: 330 -------LFNSMENCGVKPNVKHYGSVVD-------LLGRAGRLHEAYDIVNSMPTVPDI 375
Query: 427 RIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDY 474
+ + L H ++I ++ V R+L+ G CGD+
Sbjct: 376 VLWQTLLGASRTHRNVEI-AETVSRKLV----------EMGSNHCGDF 412
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 9/181 (4%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVE-LNNKLIEMYG-KCCNTRLARKVFDQL 189
S L C L S+ K++H L T F + +KL+E+Y N A F Q+
Sbjct: 7 SFLSKCTTL-SLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQI 65
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R + + W+ +I G+ + + ++ M D T V ACA A E
Sbjct: 66 RTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESI 125
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL-RNFA 307
++ I++ G + ++ V G + AE+ + M + + W AL FA
Sbjct: 126 QIHTHIVRK--GFIADALLGTTLLDVYAKVGEIDSAEKVFDEM-VKRDIASWNALISGFA 182
Query: 308 Q 308
Q
Sbjct: 183 Q 183
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 211/399 (52%), Gaps = 33/399 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G+ +A+E Q + + F +S + +C + G+ VH + S D +
Sbjct: 204 KAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSGITMDEK 263
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
L +++MY KC + A VF L + L+SW+ MI G A +G+ D + LF +M +
Sbjct: 264 LATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMERED 323
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD T + V ACA V +G YF + YGI P +EHY ++ + G AG L EA
Sbjct: 324 VAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEA 383
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA------------- 331
++ ++ MP EP + V AL +IH D++L + + +LDP +
Sbjct: 384 KKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLANLLASA 443
Query: 332 -----------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLN 376
++D+ + K++ +++E V +++ L + + +K +
Sbjct: 444 GQWVDVAKVRRLMDERNV---SKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVKDMM 500
Query: 377 GQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICG 436
++R GY+PDT VLHDI EE KE LQYHSE+LAIA+GL+ T P +RI KNLR+C
Sbjct: 501 RKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRITKNLRVCR 560
Query: 437 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH A K +S++ RE++VRD RFHHF+DG CSC DYW
Sbjct: 561 DCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Query: 172 MYGKCCNTRL---ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
M G C L ARK+FD + +RNL SW+ MISGY G+ D L +F+QMR G +
Sbjct: 167 MVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGN 226
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
AC A + G ++ GI + A++ + G + EA
Sbjct: 227 GFVAASAVVACTGAGVLARGREVHRWVEQS-GITMDEKLATAVVDMYCKCGSVEEAWHVF 285
Query: 289 ERMPFEPTVEVWEALRNFAQIHG 311
+ +P + + W + +HG
Sbjct: 286 KVLPTK-GLTSWNCMIGGLAVHG 307
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 204/352 (57%), Gaps = 29/352 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ +L +C ++ ++E G ++H L + + + N L+ MY KC N AR F+++
Sbjct: 386 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 445
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ SW+ MI+GYA +G G + L +F+ MR T PD T + V AAC+ + V++G
Sbjct: 446 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M +D+G+ EHY +I +LG AG L EA + ++ MPFEP +W AL ++IH
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNM----------------- 349
+ EL A E + +L+P A ++ I K + A M
Sbjct: 566 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 625
Query: 350 LEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N+V + + D E EK ++ L+ +M++AGYV T VLHD++EE KE L+
Sbjct: 626 IEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLK 685
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA----IKIMSKIVGREL 453
YHSE+LA+AYG+++ PP P+R+IKNLR+CGDCHNA I++M K+ GR
Sbjct: 686 YHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELMLKVSGRTF 737
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
++V N ++ Y + A+ VFD + +++ SW M++ Y+ G + L LF +M
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ G ++ F V + CA A++ G L+ +++ YG+ + + A++ + G
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCG 432
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ +A E M E V W + HG
Sbjct: 433 NMEDARNAFEEME-ERDVVSWNTMIAGYARHG 463
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV N L+ Y + AR++FD++ R++ SW++M+SGYA G + LF+
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD--- 248
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P D T+ V + A ++E F+ M + + A++ +
Sbjct: 249 -AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMM 302
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIP 337
EA+E MP L +AQ G L+ +KA+ D +P
Sbjct: 303 DEAKELFNMMPCRNVASWNTMLTGYAQA--------------GMLEEAKAVFDTMP 344
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 161 KDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
+DV N ++ Y + + AR++FD R++ +W ++SGYA NG + +F+ M
Sbjct: 222 RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
P + ++ + AA + E F +M + + ++ AG
Sbjct: 282 ----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP-----CRNVASWNTMLTGYAQAGM 332
Query: 281 LIEAEEFVERMPFEPTVEVWEAL 303
L EA+ + MP + V W A+
Sbjct: 333 LEEAKAVFDTMPQKDAVS-WAAM 354
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 205/367 (55%), Gaps = 22/367 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+++ C L +++ + VHELL + L++ LI+MY KC + A+++FD ++
Sbjct: 145 FASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFDGVQ 204
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ N+ W+ MISG A +G D + +F +M PD TFL + AC+ VKEG
Sbjct: 205 RNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLVKEGRK 264
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF++M++ Y + P IEHY A++ +LG AG L EA ++ MP EP V +W AL + +
Sbjct: 265 YFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLGACRTY 324
Query: 311 GDVELEDRAEE-----------LLGDL-------DPSKAIVDKIPLPPRKKQSATNMLEE 352
EL + A LL ++ D ++ + + + K + E
Sbjct: 325 KKPELGEAAMANISRLRSGDYVLLSNIYCSQKRWDTAQGVWEMMKKKGVHKVRGKSCFEW 384
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
+ +++ D E Y+ ++GL + + AGYVP T V D+ EE KE L +HS
Sbjct: 385 AGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHS 444
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+AYG++ T +RI KNLRIC DCH+ IKI+S+++ R +IVRD RFH F +G
Sbjct: 445 EKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGL 504
Query: 469 CSCGDYW 475
CSCGDYW
Sbjct: 505 CSCGDYW 511
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
VELN +I+ + N R+A+ VF+++R R++ +W+ MI GY + + L LF M K
Sbjct: 77 VELN-LIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNK 135
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE-HYI---AIIKVLGSA 278
+ PDK TF V CA A+K E++ I IE ++I A+I +
Sbjct: 136 SNVEPDKYTFASVINGCAKLGALKHAQWVHELL-----IEKRIELNFILSSALIDMYSKC 190
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + A+E + + V +W A+ + +HG
Sbjct: 191 GKIQTAKEIFDGVQ-RNNVCIWNAMISGLAVHG 222
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 217/422 (51%), Gaps = 58/422 (13%)
Query: 112 REAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
+EA+E Q A F+S+L +C ++ + +G ++H + DV ++N L
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 382
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE----------- 218
+++Y KC + ++F + RN +W+ +I G+ G G L LF
Sbjct: 383 MDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 442
Query: 219 --------------------QMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
Q+ PDK TF+ V +ACA+A + +G YF M D
Sbjct: 443 VTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 502
Query: 259 YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVEL--- 315
+GI P IEHY ++ +LG GHL +A + ++ +PF+P+V VW AL IH D+EL
Sbjct: 503 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 562
Query: 316 ----------EDRAEELLGD--------LDPSKAIVDKIPLPPRKKQSATNMLEEKNRVS 357
+D+A +L D ++ + KK+ + +E + V
Sbjct: 563 SAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVH 622
Query: 358 DYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAI 413
+ D E + G L+ + ++AGY+P+ VL D+++E KE+ L HSERLA+
Sbjct: 623 SFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLAL 682
Query: 414 AYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGD 473
++G+I TP P+RI+KNLRIC DCH AIK +SK+V RE++VRD RFHHF++G CSCGD
Sbjct: 683 SFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGD 742
Query: 474 YW 475
YW
Sbjct: 743 YW 744
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 67/118 (56%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+ +C L++ ++GK VH S + D+ + L+++Y K + AR+ F+++
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIP 302
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K+++ W MI+ YA + Q + + +F QMR+ P++ TF V ACA+ E + G
Sbjct: 303 KKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF+++L + E+G +H + + + LI+ Y C +AR+VFD +
Sbjct: 141 VFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGI 200
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW M++ +A N + L LF QMR G P+ TF VF AC EA G
Sbjct: 201 LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVG 259
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 116 EYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYG 174
E++G + + +++ L C GK +H E+L+ + D+ N L+ MY
Sbjct: 26 EFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCL-DLFAWNILLNMYV 84
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV 234
K A K+FD++ +RN S+ +I GYA + + + + LF ++ + G + F
Sbjct: 85 KSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTT 144
Query: 235 VFAACASAEAVKEGF 249
+ S + + G+
Sbjct: 145 ILKLLVSTDCGELGW 159
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 191/338 (56%), Gaps = 27/338 (7%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L++ LI MY KC A VF+ L + N+ +W+ M++G+ ANG L LF +M T
Sbjct: 226 LSSALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALELFARMEIT 285
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G P+K TF V AC+ V+EG FE M YGI P I HY ++ + AG +
Sbjct: 286 GLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDK 345
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAI----------- 332
AE+ ++ MP +P VW+AL + H + EL +A +L + P+
Sbjct: 346 AEKMIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPNDHAGYVLLSNIYAL 405
Query: 333 ---------VDKIPLP-PRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQ 378
V K+ L +K ++ +E + ++ S D YE + + Q
Sbjct: 406 DGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYEMLSEMCQQ 465
Query: 379 MREAGYVPDTRYVLHDIDEE-AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
++ AGYVPDT +VL DID+E KE +L HSE+LAIA+GLIST P P+RI KNLR+CGD
Sbjct: 466 LKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKNLRVCGD 525
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
CHNA+K++SKI GR +IVRD RFHHFR+G CSCGD+W
Sbjct: 526 CHNAVKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 210/375 (56%), Gaps = 32/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+FS +L +C L + V + F D+ L N LI +C + L+++VFD++
Sbjct: 370 MFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKM 429
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ SW+ M+ YA +GQG + L+LF QM PD TF+ + +AC+ A +EG
Sbjct: 430 GSRDTVSWNSMLKAYAMHGQGKEALLLFSQMD---AQPDGATFVALLSACSHAGMAEEGA 486
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
FE M N++GIVP ++HY ++ +LG AG + EA+E +++MP EP VW AL +
Sbjct: 487 KIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRK 546
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------VDKIPLPPR-------KKQSATN 348
HG+ +L A L +LDP+ ++ ++ L R +K+ +
Sbjct: 547 HGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLS 606
Query: 349 MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E N+V ++ S E E +++ L ++++ GYVP LHDI++E KE+ L
Sbjct: 607 WIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQL 666
Query: 405 QYHSERLAIAYGLISTPPRM----PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
YHSE+LA+A+ L++ ++I+KN+RIC DCHN +K+ S++V E++VRD+ R
Sbjct: 667 YYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNR 726
Query: 461 FHHFRDGKCSCGDYW 475
FHHF+ CSC DYW
Sbjct: 727 FHHFKAKVCSCNDYW 741
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN-TRLARKVFDQL 189
F+S++ +CG + G++VH L ++F V + N LI MY K C A V++ +
Sbjct: 168 FASVISACGGDDNC--GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAM 225
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA-CASAEAVKEG 248
RNL SW+ MI+G+ G G L LF QM G D+ T + +F+ C + ++
Sbjct: 226 GFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECC 285
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
F + + G + IE A++K S G EV + R F +
Sbjct: 286 F-QLQCLTIKTGFILKIEVATALVKAYSSLGG-----------------EVSDCYRIFLE 327
Query: 309 IHG--DVELEDRAEELLGDLDPSKAIV 333
+ G DV + DP KA+V
Sbjct: 328 LDGRQDVVSWTGIIAAFAERDPKKALV 354
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 95 LESLDVNLLS----LCKEGKVREAIEYMGQDASASA---GYDVFSSLLDSCGNLKSIEMG 147
L S +NLL LC G ++EA++ + +++L +C S+ G
Sbjct: 23 LNSEAINLLHHIRLLCSRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEG 82
Query: 148 KRVHE--LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+ +H L ++ L N ++ MY KC + A ++FD++ ++N+ SW ++SGYA
Sbjct: 83 QALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYA 142
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS---------AEAVKEGFLYFEIMK 256
+G+ + +F M P + F V +AC A A+K F
Sbjct: 143 QHGRSNECFRVFRGML-IWHQPTEFAFASVISACGGDDNCGRQVHALALKTSF------- 194
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE 316
D + G + K G A EA E M F V W ++ Q+ G
Sbjct: 195 -DSCVYVGNALIMMYCKSCGGAD---EAWNVYEAMGFRNLVS-WNSMIAGFQVCG---CG 246
Query: 317 DRAEELLGDLDPSKAIVDKIPL 338
+RA EL + D+ L
Sbjct: 247 NRALELFSQMHVGGIRFDRATL 268
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 207/368 (56%), Gaps = 26/368 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+ +C L S+ +G+ H D + LI+MY K + + KVF+ L++++
Sbjct: 353 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 412
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+SW+ MI GY +G + + LFE+M++TG +PD TFL V AC + + EG Y +
Sbjct: 413 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 472
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQIHGD 312
MK+ +G+ P ++HY +I +LG AG L +A V E M E V +W++L + +IH +
Sbjct: 473 QMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 532
Query: 313 VELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNMLE 351
+E+ ++ L +L+P K + ++ +K + + +E
Sbjct: 533 LEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 592
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+V + + + +E++K L ++ + GY PDT V HD+ EE K + L+ H
Sbjct: 593 LNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGH 652
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ YGLI T +R+ KNLRIC DCHNA K++SK++ RE++VRDNKRFHHF++G
Sbjct: 653 SEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 712
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 713 VCSCGDYW 720
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C LKS+ +GK VH + + +D+ + ++ +Y C + +FD + +
Sbjct: 251 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 310
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L SW+ +I+GY NG L +F QM G + + VF AC+ +++ G
Sbjct: 311 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 366
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C + I +GK VH K++ LNN L++MY KC A+ +F +
Sbjct: 47 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 106
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAAC----------- 239
N+ SW+ M+ G++A G + QM G D+ T L C
Sbjct: 107 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 166
Query: 240 ASAEAVKEGFLYFEIMKNDY 259
++K+ F+Y E++ N +
Sbjct: 167 LHCYSLKQEFVYNELVANAF 186
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K +H FV + + N + Y KC + A++VF +R + ++SW+ +I G+A +
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----EGFLYFEIMKNDYGIV 262
L QM+ +G PD T + +AC+ ++++ GF+ ++ D +
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV- 283
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
Y++++ + G L + + M
Sbjct: 284 -----YLSVLSLYIHCGELCTVQALFDAM 307
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 205/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C L ++ K +H + + + +NN LI+MY KC N AR VF++++ R
Sbjct: 85 SVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSR 144
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ +A +G ++ L F QM+ P+ TF+ V AC+ A V+EG F
Sbjct: 145 NVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTF 204
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M N++ I P EHY ++ + G A L +A E VE MP P V +W +L QIHG+
Sbjct: 205 ASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHGE 264
Query: 313 VELEDRAEELLGDLDPSK--AIVD--KIPLPPRK-----------------KQSATNMLE 351
EL + A + + +L+P A+V I R+ K+ + +E
Sbjct: 265 NELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRGISKERGCSRIE 324
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V ++ D + YEK+ + +++ GY P+TR VL D++EE K++ + +H
Sbjct: 325 LNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDVEEEGKKEVVLWH 384
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ YGL+ +RI+KNLR+C DCH IK++SK+ G E+IVRD RFHH++ G
Sbjct: 385 SEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIVRDRTRFHHYKAG 444
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 445 VCSCNDYW 452
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
+I Y + AR +FDQ+ +++L W MISGYA + + + L LF +M+ G PD
Sbjct: 20 MISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPD 79
Query: 229 KETFLVVFAACASAEAV-KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ T L V +ACA + + +++ + KN G + + A+I + G+L A
Sbjct: 80 QVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN--ALIDMYAKCGNLGAARGV 137
Query: 288 VERMPFEPTVEVWEALRNFAQIHGD 312
E+M + W ++ N IHGD
Sbjct: 138 FEKMQSRNVIS-WTSMINAFAIHGD 161
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 206/371 (55%), Gaps = 27/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S++ SC L ++ G+++H E+++ A + V + + LI MY +C + KVF +
Sbjct: 288 FVSVISSCSELATLGQGQQIHAEVIKAGASLI-VSVISSLISMYSRCGCLEYSLKVFLEC 346
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ W MI+ Y +G+G + + LF QM + + TFL + AC+ ++G
Sbjct: 347 ENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGI 406
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F++M YG+ P +EHY ++ +LG G + EAE + MP + V W+ L + +I
Sbjct: 407 KFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKI 466
Query: 310 HGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATN 348
H E+ R E + LDP + V + R KK+ +
Sbjct: 467 HKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGIS 526
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
LE KN++ + D + + ++ L +M++ GYVPD VLHD+D E KE +L
Sbjct: 527 WLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSL 586
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LAIA+ L+ TP P+R+IKNLR+C DCH AIK +S+I RE+IVRD+ RFHHF
Sbjct: 587 VHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHF 646
Query: 465 RDGKCSCGDYW 475
++G+CSCGDYW
Sbjct: 647 KNGRCSCGDYW 657
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 47/243 (19%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
L +LC +G +++A + + +FS LL SC + S+ +GK++H L+ TS
Sbjct: 24 LTAEFTNLCSKGHLKQAFDRFSSHIWSEP--SLFSHLLQSCISENSLSLGKQLHSLIITS 81
Query: 158 AFVKDVELNNKLIEMYGKC--------------------CNTRL-----------ARKVF 186
D ++N L+ +Y KC CN + ARK+F
Sbjct: 82 GCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMF 141
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D++ +RN+++W+ M++G +GL LF +M + G PD+ V CA A+
Sbjct: 142 DEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALV 201
Query: 247 EGFLYFEIMKNDYGIV--PGIEHYIAIIKVLG----SAGHLIEAEEFVERMPFEPTVEVW 300
G + +G V G E + ++ L G L E E + MP + V W
Sbjct: 202 AG-------RQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVV-AW 253
Query: 301 EAL 303
L
Sbjct: 254 NTL 256
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L C L+++ G++VH +R F ++ + + L MY KC + ++ +
Sbjct: 187 LGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMP 246
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N+ +W+ +I+G A NG + L + M+ G PDK TF+ V ++C+ + +G
Sbjct: 247 SQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 198/373 (53%), Gaps = 31/373 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L + L + G H + F+ + + N LI+MY KC + K+F+++
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 695
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW+ M+SGYA +G G + LF M+++ D +F+ V +AC A V+EG
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 755
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M + Y I P +EHY ++ +LG AG E F++ MP EP VW AL ++H
Sbjct: 756 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH 815
Query: 311 GDVELEDRAEELLGDLDP------------------------SKAIVDKIPLPPRKKQSA 346
+V+L + A + L L+P +++ ++ + L KK
Sbjct: 816 SNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGL---KKTPG 872
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E KN+V +R D + E M L +M + GYVPD VL +++EE KE
Sbjct: 873 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEM 932
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSERLAI + L++TPP ++I+KNLR+C DCH K +SKI R +IVRD RFH
Sbjct: 933 FLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFH 992
Query: 463 HFRDGKCSCGDYW 475
HF DG CSC DYW
Sbjct: 993 HFEDGICSCNDYW 1005
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KR 192
++ +C L ++ G +H L+ F D + N LI+MY KC + A +F++ +
Sbjct: 537 VVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTK 596
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W+++I+ Y NG + + F QMR HP+ TF+ V A A A +EG + F
Sbjct: 597 DEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREG-MAF 655
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
G + ++I + G L +E+ M + TV W A+ + +HG
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH 714
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPL 338
DRA L + S+ +D +
Sbjct: 715 ---GDRAIALFSLMQESQVQIDSVSF 737
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L +++GK +H + D+ L+ MY KC A F+++ R
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR 494
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ +I+GYA G + + +F ++R + +PD T + V ACA + +G
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH 554
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ G A+I + G L AE + F W +
Sbjct: 555 GLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVI 604
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
C+ +++ +G + S+ + ++F + L +IE+ + +H + F V
Sbjct: 212 CEAVDFFRSMQLVGVEPSSVSLLNLFPGIC----KLSNIELCRSIHGYVFRRDFSSAV-- 265
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N LI++Y KC + +AR+VFDQ+ ++ SW M++GYA NG + L LF++M+
Sbjct: 266 SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 226 HPDKETFLVVFAACASAEAVKEG 248
+K + + F A A +++G
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKG 348
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+E GK +H D+ + L+ MY KC T A+++F L+ R+L +W +I+
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIV 262
G + L LF++M+ P++ T + + ACA +K G ++ +K D +
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD--MD 462
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN-FAQIHGD 312
+ A++ + G A RM V W +L N +AQI GD
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV-TWNSLINGYAQI-GD 511
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A E+ +S Y + LL SC +L + ++H + S F + + LI +Y
Sbjct: 18 ASEFPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLY 73
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
LAR VFD + W+ MI Y + Q + L ++ M + G PDK TF
Sbjct: 74 SLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFT 133
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
V AC A ++EG ++F + G+ + ++ + G L A E ++MP
Sbjct: 134 FVLKACTGALNLQEG-VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP- 191
Query: 294 EPTVEVWEAL-RNFAQIHGDVELED--RAEELLGDLDPSKAIVDKIP 337
+ V W A+ +Q E D R+ +L+G S ++++ P
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFP 238
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 207/369 (56%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C L +I++G +H ++ V + L + L++MY KC + A +VF + +R
Sbjct: 365 STLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEER 424
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W MI+G +G+G + LF +M++ P+ TF V AC+ A V EG ++F
Sbjct: 425 DVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFF 484
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ YG+VP ++HY ++ +LG AG L EA E + M P+ VW AL +H +
Sbjct: 485 HEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMN 544
Query: 313 VELEDRAEELLGDLDPSK--AIV------------DKIPLPPR-------KKQSATNMLE 351
VEL + A + L L+P AIV +K+ + KK+ + +E
Sbjct: 545 VELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIE 604
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE-AKEKALQY 406
V ++ D L Y K++ + +++ GY P+ ++L I+E+ KE+AL
Sbjct: 605 ANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSL 664
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GL++ P P+R++KNLRICGDCH K++S++ R++++RD RFHHFRD
Sbjct: 665 HSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRD 724
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 725 GHCSCMDYW 733
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ + LK+ +G VH + +F D+ + N L+ YG C + +A ++F +
Sbjct: 129 FPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGIS 188
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+++ SW+ MIS +A D L LF +M + P+ T + V +ACA ++ G
Sbjct: 189 CKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRW 248
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
++ GI + A++ + G + +A++ + MP E V W
Sbjct: 249 VCSYIERK-GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWT--------- 297
Query: 311 GDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNML 350
+ L+ A+ +GD D ++ + + +P+ K+ +A N+L
Sbjct: 298 --IMLDGYAK--MGDYDAARLVFNAMPV---KEIAAWNVL 330
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C +E G+ V + D+ L N +++MY KC + A+K+FD++ +R+
Sbjct: 233 VLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292
Query: 194 -------------------------------LSSWHLMISGYAANGQGADGLMLFEQMRK 222
+++W+++IS Y NG+ + L +F +++
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352
Query: 223 TG-PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ PD+ T + +ACA A+ G +K + GIV +++ + G L
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE-GIVLNCHLISSLVDMYAKCGSL 411
Query: 282 IEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+A E + E V VW A+ +HG
Sbjct: 412 EKALEVFYSVE-ERDVYVWSAMIAGLGMHG 440
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQL 189
S +D C + K + K VH +LRT F D +KL + L AR +FDQ+
Sbjct: 30 STIDKCSSSKQL---KEVHARMLRTGLFF-DPFSASKLFTASALSSFSTLDYARNLFDQI 85
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ NL +W+ +I YA++ ++F + + K P+K TF V A + +A + G
Sbjct: 86 PQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVG 145
Query: 249 FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
+ + G++ YI ++++ G+ G L AE + + + V + F
Sbjct: 146 ---TAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAF 202
Query: 307 AQ 308
AQ
Sbjct: 203 AQ 204
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 204/369 (55%), Gaps = 34/369 (9%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK--R 192
L +C + S++ G VHE R +V + N LI+MY KC + LA +VF +++ R
Sbjct: 232 LSACAQIGSLQDGLYVHEFARKIGVNGNVRVCNALIDMYSKCGSLDLALEVFHSIKREDR 291
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
L S++ I + +G G D L LF++M T PD+ T++ V C A V +G F
Sbjct: 292 TLVSYNTAIQAVSMHGHGGDALRLFDEM-PTFIEPDEVTYIAVLCGCNHAGLVDDGLRVF 350
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ ++P ++HY A++ +LG AG L EA + + MPF + +W+ L A+ HGD
Sbjct: 351 HSMR----VLPNVKHYGAVVDLLGRAGRLAEAYDTIVSMPFPADIVLWQTLLGAAKTHGD 406
Query: 313 VELEDRA----EELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS------T 362
VEL + A +EL ++D ++ + + + + + + R +D R T
Sbjct: 407 VELAELAATKLDELGSNVDGDYVLLSNV-YASKARWADVRRVRDTMRSNDVRKVPGFSYT 465
Query: 363 DL----------------YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
++ ++ Y ++ + ++ E GY P+T VLHDI EE K+ AL Y
Sbjct: 466 EISGVMHKFINGDKEHPRWQEIYRALEEIVSRIGELGYEPETSNVLHDIGEEEKQYALSY 525
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+GLI+TPP LR+IKNLR CGDCH K++SK GR +I+RD RFH F D
Sbjct: 526 HSEKLAIAFGLIATPPGETLRVIKNLRTCGDCHVVAKLISKAYGRVIIIRDRARFHQFED 585
Query: 467 GKCSCGDYW 475
G+CSC DYW
Sbjct: 586 GQCSCKDYW 594
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQM- 220
DV L L++ Y KC + ARKVFD++ R+++SW+ +++G A + L LF ++
Sbjct: 152 DVRLITTLVDSYAKCGDLASARKVFDEMVVRDVASWNALLAGLAQGTEPTLALALFHRLV 211
Query: 221 ---RKTGP--HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
R+ P P++ T + +ACA ++++G LY G+ + A+I +
Sbjct: 212 GSFRELPPREEPNEVTIVAALSACAQIGSLQDG-LYVHEFARKIGVNGNVRVCNALIDMY 270
Query: 276 GSAGHLIEAEE 286
G L A E
Sbjct: 271 SKCGSLDLALE 281
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 201/369 (54%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L + L S+ GK+VH L F + + + L++MY C + A +VF++ + +
Sbjct: 573 SILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCK 632
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W MI+ +G G + LF++M +TG PD +FL + AC+ ++ V+EG Y
Sbjct: 633 DVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYL 692
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+IM + Y + P EHY ++ +LG +G EA EF++ MP +P VW AL ++H +
Sbjct: 693 DIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRN 752
Query: 313 VELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNMLE 351
L A L +L+P +K ++ +K A + +E
Sbjct: 753 YGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIE 812
Query: 352 EKNRVSDYRSTDLYRGEYE----KMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKALQY 406
N + + S D + E K+ + +R E GYV DTR+VLHD EE K L
Sbjct: 813 IGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHK 872
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSER+AIA+GLIST P MP+RI KNLR+CGDCH K++SK+ R+++VRD RFHHF
Sbjct: 873 HSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSG 932
Query: 467 GKCSCGDYW 475
G CSC D+W
Sbjct: 933 GSCSCEDFW 941
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L++C LKSI + K+VH + + D+ L N+LI++YG+C + +F ++
Sbjct: 470 MIGSILETCCGLKSISLLKQVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRV 528
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
K+++ SW MI+ NG+ + LF +M+K PD + + A A ++ +G
Sbjct: 529 EKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGK 588
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
F I +N P + + + GS + I ER + V +W A+ N
Sbjct: 589 QVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRV---FERAKCKDVV-LWTAMINAT 644
Query: 308 QIHG 311
+HG
Sbjct: 645 GMHG 648
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRT 156
S +L LCKEG +R+A+ + A + + + +LD ++ G++VH T
Sbjct: 28 SASASLKRLCKEGDLRQALRQLTTRAPPAREH--YGWVLDLVAARRAAAEGRQVHAHAVT 85
Query: 157 SAFVK---DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
+ + D L KL+ MYG+C AR++F+ + R + SW+ ++ Y ++G +
Sbjct: 86 TGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEA 145
Query: 214 LMLFEQMRKT---GPHPDKETFLVVFAACAS 241
+ ++ MR + G PD T V AC +
Sbjct: 146 MRVYGAMRASAAPGSAPDGCTLASVLKACGA 176
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 109 GKVREAIE-YMGQDASASAGYD----VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
G EA+ Y ASA+ G +S+L +CG G VH L K
Sbjct: 140 GSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKST 199
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRK--RNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+ N LI MY KC A +VF+ L++ R+++SW+ ++SG NG+ + L LF M+
Sbjct: 200 LVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQ 259
Query: 222 KTGPHPDKETFLVVFAACA 240
G + T + V CA
Sbjct: 260 SAGFPMNSYTSVAVLQVCA 278
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFSSL--LDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G+ EA+ SA + ++S+ L C L + +G+ +H L +++
Sbjct: 244 QNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ 303
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N L+ MY K A +VF Q+ +++ SW+ M+S Y N A+ + F +M + G
Sbjct: 304 CNALLV-MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHG 362
Query: 225 PHPD 228
PD
Sbjct: 363 FQPD 366
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 113 EAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLI 170
EAI++ G+ + SL + G+L + G+ H D+++ N L+
Sbjct: 350 EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLM 409
Query: 171 EMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE 230
+MY KC + + KVF+ + R+ SW +++ +A + + ++ L + +++K G D
Sbjct: 410 DMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSM 469
Query: 231 TFLVVFAACASAEAV 245
+ C +++
Sbjct: 470 MIGSILETCCGLKSI 484
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 198/374 (52%), Gaps = 31/374 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L + L + G H + F+ + + N LI+MY KC + K+F+++
Sbjct: 279 TFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM 338
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ SW+ M+SGYA +G G + LF M+++ D +F+ V +AC A V+EG
Sbjct: 339 DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGR 398
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M + Y I P +EHY ++ +LG AG E F++ MP EP VW AL ++
Sbjct: 399 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRM 458
Query: 310 HGDVELEDRAEELLGDLDP------------------------SKAIVDKIPLPPRKKQS 345
H +V+L + A + L L+P +++ ++ + L KK
Sbjct: 459 HSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGL---KKTP 515
Query: 346 ATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKE 401
+ +E KN+V +R D + E M L +M + GYVPD VL +++EE KE
Sbjct: 516 GCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKE 575
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L HSERLAI + L++TPP ++I+KNLR+C DCH K +SKI R +IVRD RF
Sbjct: 576 MFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRF 635
Query: 462 HHFRDGKCSCGDYW 475
HHF DG CSC DYW
Sbjct: 636 HHFEDGICSCNDYW 649
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
++FD+++ N++ W+++I+ Y NG + + F QMR HP+ TF+ V A A
Sbjct: 233 ELFDKMKLGNVT-WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLA 291
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A +EG + F G + ++I + G L +E+ M + TV W A+
Sbjct: 292 AFREG-MAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAM 349
Query: 304 RNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+ +HG DRA L + S+ +D +
Sbjct: 350 LSGYAVHGH---GDRAIALFSLMQESQVQIDSVSF 381
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 206/373 (55%), Gaps = 36/373 (9%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ + +L C ++ + ++G ++ + + +V + N I MY KC A+K+FD
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L +++ SW+ MI+GY+ +G G F+ M G PD +++ V + C+ + V+E
Sbjct: 564 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G LYF++M +GI PG+EH+ ++ +LG AGHL EA++ +++MP +PT EVW AL +
Sbjct: 624 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 683
Query: 308 QIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSA 346
+IHG+ EL + A + + +LD S ++ KI KK
Sbjct: 684 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 743
Query: 347 TNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E +N+V +++ D+ + K+ L ++ GYV +
Sbjct: 744 YSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV-----------RTESPR 792
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
+ +HSE+LA+A+G++S P MP+ I+KNLRICGDCH IK++S + RE ++RD RFH
Sbjct: 793 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFH 852
Query: 463 HFRDGKCSCGDYW 475
HF+ G CSCGDYW
Sbjct: 853 HFKSGSCSCGDYW 865
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 18/283 (6%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + +L + G+VREA+ + + D ++S L +C L S+ GK++H +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S D + + LIE+Y KC + + A++VF+ L+ RN SW ++I G + +
Sbjct: 297 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 215 MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIK 273
LF QMR D+ + + C + + G L+ +K+ + + + ++I
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLIS 414
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV 333
+ G L AE M V + ++QI + +A E +D AI
Sbjct: 415 LYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII----KAREFFDGMDTRNAIT 470
Query: 334 DKIPLPPRKKQSA--------TNMLEEKNRVSDYRS-TDLYRG 367
L + A + ML +K+ D+ + L+RG
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 513
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC------------- 177
++L+ C N + +G+++H L S + + ++N LI +Y KC
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433
Query: 178 ------------------NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
N AR+ FD + RN +W+ M+ Y +G DGL ++
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSA 493
Query: 220 M-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY--GIVPGIEHYIAIIKVLG 276
M + PD T++ +F CA A K G +I+ + G++ + A I +
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLG---DQIIGHTVKAGLILNVSVANAAITMYS 550
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + EA++ + + + V W A+ HG
Sbjct: 551 KCGRISEAQKLFDLLNGKDVVS-WNAMITGYSQHG 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 101/246 (41%), Gaps = 46/246 (18%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++ SCG L E+ ++ L F D ++ L++M+ +C A ++F Q+
Sbjct: 140 TFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 199
Query: 190 RK-------------------------------RNLSSWHLMISGYAANGQGADGLMLFE 218
+ R++ SW++MI+ + +G+ + L L
Sbjct: 200 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 259
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVL 275
+M + G D T+ ACA ++ G L+ +++++ +P I+ Y+ A+I++
Sbjct: 260 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS----LPQIDPYVASALIELY 315
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE--DRAEELLGDLDPSKAIV 333
G EA+ + +V W L I G ++ E ++ EL + +
Sbjct: 316 AKCGSFKEAKRVFNSLQDRNSVS-WTVL-----IGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 334 DKIPLP 339
D+ L
Sbjct: 370 DQFALA 375
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
SCG L LLR +V +N ++ Y K + A ++FD++ +R+++S
Sbjct: 51 SCGALSD------ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVAS 104
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFAACAS 241
W+ ++SGY + DGL F M ++G P+ TF V +C +
Sbjct: 105 WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGA 150
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 208/367 (56%), Gaps = 25/367 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S++ + ++ +++ G ++H L ++ DV + LI++YGKC A +F ++
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ W+ +I+ +G+G + L LF+ M D TF+ + +AC+ + V EG
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+IM+ +YGI P ++HY ++ +LG AG+L +A E V MP +P +W AL + +I+
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIY 608
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLE-EKNR---------- 355
G+ EL A + L ++D ++ I K + + ++R
Sbjct: 609 GNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSS 668
Query: 356 -VSDYRSTDLYRGE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
V ++ Y G Y+++K L+ +M+ GYVPD +V DI+E+ KE+ L
Sbjct: 669 VVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILN 728
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLAIA+G+ISTPPR P+RI KNLR+CGDCHNA K +S+I RE++VRD+ RFHHF+
Sbjct: 729 SHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFK 788
Query: 466 DGKCSCG 472
DG CSC
Sbjct: 789 DGICSCA 795
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 109 GKVREAIEYMGQDASASAG------YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
GK EA+ + Q S G + F +L +C +L GK+VH + F D
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V + L+ +Y + +A KVF + +++ SW+ MISG+ NG A L + +M+
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFL-YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
G D T + CA ++ V G L + ++K +G+ + A+I + G L
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNALINMYSKFGRL 273
Query: 282 IEAEEFVERMPFEPTVEVWEAL 303
+A+ ++M V W ++
Sbjct: 274 QDAQMVFDQMEVRDLVS-WNSI 294
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 153 LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG---Q 209
++R KDV + N L+ MY K A VFDQL +++ SW+ +++GY NG +
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHY 268
D + E+ R T P++ T++ + A + A+++G ++ +++KN ++ +
Sbjct: 409 AIDAYNMMEECRDT--IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL----YLDVF 462
Query: 269 IA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
+A +I + G G L +A +P + +V W A+ IHG E A +L D+
Sbjct: 463 VATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGE---EALQLFKDM 518
Query: 327 DPSKAIVDKI 336
+ D I
Sbjct: 519 LAERVKADHI 528
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 105 LCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C+ G A+ + + D + S+L C + G +H + D
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
V ++N LI MY K + A+ VFDQ+ R+L SW+ +I+ Y N + L F+ M+
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQL 316
Query: 223 TGPHPDKETF--LVVFAACASAEAVKEGFLYFEIMKN--DYGIVPGIEHYIAIIKVLGSA 278
G PD T L + S + + L F I + D +V G A++ +
Sbjct: 317 GGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG----NALVNMYAKL 372
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G++ A +++P + T+ W L
Sbjct: 373 GYMNCAHTVFDQLPRKDTIS-WNTL 396
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F++L +SC N+ + K++H LL +++ L+ KLI +Y + L+R FD +
Sbjct: 25 FNALFNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKT--GPH--PDKETFLVVFAACAS 241
K+N+ SW+ +IS Y G+ + + Q+ G H PD TF + AC S
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS 136
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 217/404 (53%), Gaps = 30/404 (7%)
Query: 100 VNLLSLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
+N ++C GK EA+ Q SLL +C +L +++ G +H + +
Sbjct: 270 INGYAIC--GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN 327
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
+ + L++MY KC LA +VF+ + +++ +W+ +I+G A +G + LF
Sbjct: 328 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLF 387
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
++M++ G P+ TF+ + +AC+ A V EG + M + YGI P +EHY +I +L
Sbjct: 388 KEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLAR 447
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IV 333
AG L EA E + MP EP AL +IHG+ EL + + L +L P + ++
Sbjct: 448 AGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILL 507
Query: 334 DKIPLPPRK-----------------KQSATNMLEEKNRVSDYRSTDLYRGE----YEKM 372
I +K K +++E K V + + D E YEK+
Sbjct: 508 SNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKL 567
Query: 373 KGLNGQMREA-GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKN 431
++ +++ A GY DT VL D++EE KE AL HSE+LAIAYGL+ + +RI+KN
Sbjct: 568 NEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKN 627
Query: 432 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LR+C DCH+ IK++SK+ GRE+IVRD RFHHF DG+CSC D+W
Sbjct: 628 LRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SSL+ N K + K++ L +DV N +I+ Y K AR VFD++
Sbjct: 203 IVSSLIHLYANGKDLGAAKQLFNLCSA----RDVVSWNAMIDGYVKHVEMGHARMVFDRM 258
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ SW+ MI+GYA G+ + L LF+QMR G P + T + + +ACA A+ +G
Sbjct: 259 VCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG- 317
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ ND I A++ + G + A + M V W + I
Sbjct: 318 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIAGMAI 376
Query: 310 HGDVELEDRAEELLGDL 326
HG+V+ A++L ++
Sbjct: 377 HGNVK---EAQQLFKEM 390
>gi|302774719|ref|XP_002970776.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
gi|300161487|gb|EFJ28102.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
Length = 750
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 219/399 (54%), Gaps = 31/399 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA + + SA D S + L +CG+L ++E G+ VH + +DV
Sbjct: 353 EHGHCSEAFVLLKEMESAKMVADASSCVAFLQACGSLLALEAGQEVHGWITMKGLEQDVF 412
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N L++MYGKC + A VFD ++++N SW+ M+ Y ++G + + +F QM + G
Sbjct: 413 VGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVEAYCSSGYSTEAIQVFLQMLQEG 472
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ +TF V AC A ++EG L+ M +DY +VP EHY + +LG +G + EA
Sbjct: 473 VKPNAKTFTSVLVACGHAGFIREGILHLVYMSSDYDVVPIAEHYACAVGLLGRSGWVKEA 532
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----SKAIVDKI---- 336
EE+V+++P + VW+AL +IHGD++ A E L + P S A+V +
Sbjct: 533 EEYVKKLP-DAEASVWDALVTACRIHGDLDRGRSAAESLLECSPHAARSYAVVAGLYDAL 591
Query: 337 -----PLPPRKKQSATNMLEEKNRVS---------DYRSTDL----YRGEYEKMKGLNGQ 378
R+ ++ + EE+ S ++ + D +G + +++ L +
Sbjct: 592 ARSDDAARVRETMTSKGLTEERVTSSILVGNTTCHEFITADTRHKRIQGIHAELEDLGQR 651
Query: 379 MREAGYVPD-TRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGD 437
+ + GY PD ++ ++H+ EE ++++L YHSERLA+ G I PLRII+N R+C D
Sbjct: 652 IAKDGYAPDASKLLMHERAEEQRQESLFYHSERLAVGLGAIKIRGDCPLRIIRNFRMCAD 711
Query: 438 CHNAIKIMSKIVGRELIVRD-NKRFHHFRDGKCSCGDYW 475
CH AIK MSK +GR +I+RD + + H F DG C+C DYW
Sbjct: 712 CHTAIKFMSKAMGRTIILRDGSSQLHRFVDGHCACRDYW 750
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 147/361 (40%), Gaps = 31/361 (8%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y+ +S++ +CG+ + + GKR+H + + L N L+EMYGKC + AR+VFD
Sbjct: 11 YEHLASIVRACGSSRDLIAGKRIHAHIADANLGNYRFLANLLVEMYGKCGSLHDARRVFD 70
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ N+ SW+L++ Y NG+ + FE+M P + + + A A + V
Sbjct: 71 SIHSPNIFSWNLLVVAYTQNGRLREARQCFEKM----PGKNVVCWTGLITANAQSGYVLS 126
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
FE M + + A++ L +AG +IEA+ E++ E +
Sbjct: 127 ARGVFEKMPQRNRVT-----WTAMVWCLVNAGDVIEAKIIHEQLVQMGIAEQLPLAKFIV 181
Query: 308 QIHGDVELEDRAEELLGDLDPSK------AIVDKIPLPPRKKQSATNMLEEKNRVSDYR- 360
Q++ D A L DL PSK A++ R +++ ++R Y
Sbjct: 182 QMYLSCGSLDEARNLF-DLLPSKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTGPYSV 240
Query: 361 -------STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSER--- 410
S G+ + L +MR G PD+ + +D A L H R
Sbjct: 241 LVWNAIISASFQNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCAASGNL--HEGRMVA 298
Query: 411 -LAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
L YGL S + ++ CG +A ++ + R +V + G C
Sbjct: 299 ELVTVYGLQSNDL-VNSSLVHMYGKCGSLDDARRVFDGMAHRGPVVWSKMIAAYSEHGHC 357
Query: 470 S 470
S
Sbjct: 358 S 358
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ LD+C ++ G+ V EL+ + +N+ L+ MYGKC + AR+VFD +
Sbjct: 278 LATALDTCAASGNLHEGRMVAELVTVYGLQSNDLVNSSLVHMYGKCGSLDDARRVFDGMA 337
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R W MI+ Y+ +G ++ +L ++M D + + AC S A++ G
Sbjct: 338 HRGPVVWSKMIAAYSEHGHCSEAFVLLKEMESAKMVADASSCVAFLQACGSLLALEAG-- 395
Query: 251 YFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERM 291
E+ + + + G+E + A++ + G G + EA + M
Sbjct: 396 -QEV--HGWITMKGLEQDVFVGNALVDMYGKCGSVEEAWAVFDNM 437
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 202/367 (55%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + +L ++E+ + V + K V L N LI+ KC + A VF+ +++R+
Sbjct: 236 VLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRS 295
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW +I A G+G + + +FE+M+ G PD F+ V AC+ A V EG YF+
Sbjct: 296 VVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFD 355
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK +YGI P IEHY ++ + G AG + A EFV MP +P +W +L + + HG +
Sbjct: 356 AMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRL 415
Query: 314 EL-EDRAEELLGDLDPSKA----IVDKIPLPPR----------------KKQSATNMLEE 352
EL E LL + +A + + L R KK +++E
Sbjct: 416 ELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVEL 475
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V ++ + D Y+ Y ++ + ++R G++ T VL D+DEE KE ALQ+HS
Sbjct: 476 DGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHS 535
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+ L+ TPP +R++KNLR+C DCH AIK +S++ RE++VRD RFH F+DG
Sbjct: 536 EKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGS 595
Query: 469 CSCGDYW 475
CSC D+W
Sbjct: 596 CSCKDFW 602
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 131 FSSLLDSCGNLK-SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
F LL +C L S ++G + H F D ++N LI MY L AR VFD
Sbjct: 129 FPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFD 188
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ K + +W MI GY G +D + LF +M+ G D+ T + V AA A++
Sbjct: 189 RMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALEL 248
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ + GI + A+I L G + A E M + +V W ++ +
Sbjct: 249 ARWVRRFVERE-GIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQ-QRSVVSWTSVIDAL 306
Query: 308 QIHG 311
+ G
Sbjct: 307 AMEG 310
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 198/368 (53%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ S L ++ G+++H + V + + LI MY KC + K
Sbjct: 195 SVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHP 254
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ W MI+ Y +G+G + + LFEQM + G + TFL + AC+ ++G +F
Sbjct: 255 DSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFF 314
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
++M YG+ P +EHY ++ +LG +G L EAE + MP E V +W+ L + +IH +
Sbjct: 315 KLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRN 374
Query: 313 VELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSATNMLE 351
++ R E + L+P + V K+ R KK+ + LE
Sbjct: 375 ADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLE 434
Query: 352 EKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
KNRV + D E+ +K L +M+ GYVPDT V HD D E KE +L H
Sbjct: 435 VKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNH 494
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LAIA+GL++ PP P+R++KNLRIC DCH AIK++S I RE+IVRD RFHHF+ G
Sbjct: 495 SEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHG 554
Query: 468 KCSCGDYW 475
KCSCGDYW
Sbjct: 555 KCSCGDYW 562
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S+L C L++ GK+VH + + ++ + + L MY K + KV +
Sbjct: 91 TLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAM 150
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R RN+ +W+ +I+G A NG L L+ M+ +G PDK T + V ++ A + +G
Sbjct: 151 RIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQG 209
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
++++ +N LI + + + A KVFD++ +RN+++W+ M+SG +GL LF +
Sbjct: 20 MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M + G PD+ T V CA A G
Sbjct: 80 MHELGFLPDEFTLGSVLRGCAGLRASYAG 108
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 200/375 (53%), Gaps = 29/375 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG----KCCNTRLARKV 185
V S+L +C +L ++ GK +H L+ V L N LI MY KC A +V
Sbjct: 266 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEV 325
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + ++ +SSW+ +I G A NG L +F +M+ G P++ TF+ V AC V
Sbjct: 326 FNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLV 385
Query: 246 KEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
EG +F M +GI P ++HY ++ +LG AG L EAE+ +E MP P V W AL
Sbjct: 386 DEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLG 445
Query: 306 FAQIHGDVELEDRAEELLGDLDP--------------SKA-IVDKIPLPPRKKQSAT--- 347
+ HGD E+ +R L +L P SK D + + KQ
Sbjct: 446 ACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKT 505
Query: 348 ---NMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEAK 400
+++E V ++ + D K++G+ +M + GY PDT V DIDEE K
Sbjct: 506 PGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEK 565
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E L HSE+LAIA+GL++ P P+RI+KNLRIC DCH A K++SK RE++VRD R
Sbjct: 566 ETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHR 625
Query: 461 FHHFRDGKCSCGDYW 475
FH+F++G CSC DYW
Sbjct: 626 FHYFKEGACSCMDYW 640
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 55/236 (23%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD------------------- 187
GK +H+ + F DV + N LI MY C N R ARK+FD
Sbjct: 148 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 207
Query: 188 ---------------QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
++ ++++ SW +ISGY NG + L++F +M G D+
Sbjct: 208 KGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVV 267
Query: 233 LVVFAACASAEAVKEGFLYFEIMKNDYGIV--PGIEHYI----AIIKVLGS----AGHLI 282
+ V +ACA VK G K +G+V GIE Y+ A+I + G +
Sbjct: 268 VSVLSACAHLSIVKTG-------KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320
Query: 283 EAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
A E M E V W AL ++G VE R+ ++ ++ + I ++I
Sbjct: 321 NALEVFNGME-EKGVSSWNALIIGLAVNGLVE---RSLDMFSEMKNNGVIPNEITF 372
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
+ + L +C NLK R+ + + F+ D ++L++ L + ++FD
Sbjct: 31 ILETHLHNCHNLKQF---NRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFD 87
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ N W+ M+ Y + L+L++ M K PD T+ +V ACA
Sbjct: 88 RIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA 140
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 209/374 (55%), Gaps = 29/374 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQL 189
F + +C NL S K++H L S + + +NN LI +Y K N + AR VFD++
Sbjct: 348 FVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM 407
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N S++ MI GYA +G G + L+L+++M +G P+K TF+ V +ACA V EG
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQ 467
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK + I P EHY +I +LG AG L EAE F++ MP++P W AL +
Sbjct: 468 EYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK 527
Query: 310 HGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRK-----------------KQSATN 348
H ++ L +RA L + P A ++ + RK K+ +
Sbjct: 528 HKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCS 587
Query: 349 MLEEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA- 403
+E K + V++ S + R E ++ + +M++ GYV D ++ + DE +
Sbjct: 588 WIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEE 647
Query: 404 --LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L +HSE+LA+A+GL+ST L ++KNLRICGDCHNAIK MS + GRE+IVRDN RF
Sbjct: 648 MRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRF 707
Query: 462 HHFRDGKCSCGDYW 475
H F+DGKCSCGDYW
Sbjct: 708 HCFKDGKCSCGDYW 721
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 25/198 (12%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC--CNTRL-AR 183
D+F+ S+L++ +L + G++ H L + F ++ + + LI+ Y KC C+ +
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
KVF ++ +L W+ MISGY+ N + + + F QM++ G PD +F+ V +AC++
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYI---------AIIKVLGSAGHLIEAEEFVERMPF 293
+ + K +G+ I+ +I A+I + +G+L +A +RMP
Sbjct: 359 SSPSQ-------CKQIHGL--AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Query: 294 EPTVEVWEALRNFAQIHG 311
V ++ +AQ HG
Sbjct: 410 LNAVSFNCMIKGYAQ-HG 426
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN-- 166
GK A+ AS++ + F +L CG L +AF E N
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR-----------AAFYSTEEPNVF 75
Query: 167 --NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
N +++ Y K +AR++FD++ + + S++ +ISGYA + ++LF++MRK G
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 225 PHPDKETFLVVFAAC 239
D T + AAC
Sbjct: 136 FEVDGFTLSGLIAAC 150
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 209/381 (54%), Gaps = 31/381 (8%)
Query: 109 GKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
G+ EA+ MG G+ + S LL +C L ++ +G+R H + ++
Sbjct: 75 GRPNEALTLFREMGLRGVEPDGFTMVS-LLSACAELGALALGRRAHVYMVKVGLDGNLHA 133
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N L+++Y KC + R A KVFD++ ++++ SW +I G A NG G + L LF+++ + G
Sbjct: 134 GNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 193
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P + TF+ V AC+ V EGF YF+ MK +YGIVP IEHY ++ +LG AG + +A
Sbjct: 194 MPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAH 253
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPR---- 341
EF++ MP +P VW L IHG + L + A L L+P K D + L
Sbjct: 254 EFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEP-KHSGDYVLLSNLYASE 312
Query: 342 ------------------KKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQM 379
KK +++E +NR+ ++ RS Y K+ + +
Sbjct: 313 QRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLL 372
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ GYVP VL DI+EE KE AL YHSE++AIA+ LI+T +P+R++KNLR+C DCH
Sbjct: 373 KLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCH 432
Query: 440 NAIKIMSKIVGRELIVRDNKR 460
AIK++SK+ RE++VRD R
Sbjct: 433 LAIKLISKVFDREIVVRDRSR 453
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
L + G++VH + + F V + N L+ MY C + A K+F+ + +RNL +W+ +
Sbjct: 8 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 67
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
I+GYA NG+ + L LF +M G PD T + + +ACA A+ G M G
Sbjct: 68 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK-VG 126
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + A++ + G + +A + + M E +V W +L
Sbjct: 127 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEME-EKSVVSWTSL 168
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 205/366 (56%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C + ++ +GK +H S + + LI+MY KC ++ +FD++ +
Sbjct: 610 LGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGE 669
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+++I+GY +G G + LF+ M+ G PD TF+ + AC A V EG Y
Sbjct: 670 VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQ 729
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M++ +GI P +EHY ++ +LG AG L EA E V +P +P +W +L + + + D++
Sbjct: 730 MQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLD 789
Query: 315 LEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLEEK 353
+ ++ L +L P KA + ++ +K + + +E
Sbjct: 790 IGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIG 849
Query: 354 NRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
+VS + D + K++ L ++ + GY PDT VLH+++E+ K K L+ HSE
Sbjct: 850 GKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSE 909
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
+LAI++GL++T LR+ KNLRIC DCHNAIK++SKI RE+IVRDNKRFHHF++G C
Sbjct: 910 KLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFC 969
Query: 470 SCGDYW 475
SCGDYW
Sbjct: 970 SCGDYW 975
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D+F+ SLL +C LKS+ GK +H + + F D + L+ +Y +C LA+ F
Sbjct: 501 DLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFF 560
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + ++NL W+ MI+G++ N D L +F QM + PD+ + + AC+ A++
Sbjct: 561 DNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALR 620
Query: 247 EG 248
G
Sbjct: 621 LG 622
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 33/314 (10%)
Query: 104 SLCKEGKVREAIEYMGQD------ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
+LC G + +A ++ + +S S + LL CG K+IE+G+++H + TS
Sbjct: 63 NLCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTS 122
Query: 158 A-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
F DV L +L+ MY C + + VF+ R++NL W+ ++SGY N D + +
Sbjct: 123 PHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFV 182
Query: 217 F-EQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKV 274
F E + T PD T V AC V+ G ++ +K ++ + A+I +
Sbjct: 183 FVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTK--VLSDVFVGNALIAM 240
Query: 275 LGSAGHLIEAEEFVERMPFEPTVE----VWEALRN--FAQIHGDVE-LEDRAEELLGDLD 327
G G + A + ++MP V ++ L N F + +G + L + E L+ D+
Sbjct: 241 YGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDV- 299
Query: 328 PSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMK---GLNGQMREAGY 384
+V IPL R+ + M+ + L G ++K L + GY
Sbjct: 300 --ATMVTVIPLCARQGEVRLGMV--------FHGLALKLGLCGELKVNSSLLDMYSKCGY 349
Query: 385 VPDTRYVLHDIDEE 398
+ + R VL D +E+
Sbjct: 350 LCEAR-VLFDTNEK 362
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 148 KRVHELLRTSAFVKDVEL-NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
K +H F++ EL N + Y KC + A VF + + +SSW+ +I G+
Sbjct: 420 KEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQ 479
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGI 265
NG L L+ MR +G PD T + +ACA +++ G ++ +++N + + I
Sbjct: 480 NGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFI 539
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN-FAQ 308
I+++ + G ++ A+ F + M E + W + N F+Q
Sbjct: 540 --CISLVSLYVQCGKILLAKLFFDNME-EKNLVCWNTMINGFSQ 580
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ C + +G H L ++++N+ L++MY KC AR +FD ++
Sbjct: 304 TVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEK 362
Query: 193 NLSSWHLMISGYAA--NGQGADGLMLFEQMRK 222
N+ SW+ MI GY+ + +GA FE +RK
Sbjct: 363 NVISWNSMIGGYSKDRDFRGA-----FELLRK 389
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 204/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ C +E G ++H + + ++D + + L++MYGKC L+ ++F+++
Sbjct: 477 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 536
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R +W+ +I+ +A +G G + + F++M +G P+ F+ + AC+ A V EG
Sbjct: 537 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 596
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI P EHY II G AG L EA +F+ MP +P W +L ++
Sbjct: 597 KYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRM 656
Query: 310 HGDVELEDRAEELLGDLDPSKA--------------------IVDKIPLPPR-KKQSATN 348
G EL + A + L L+P V K+ R KK +
Sbjct: 657 RGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 716
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ + + S D + YEK++ L +++E GY+PDT ++ ++++ AKE+ L
Sbjct: 717 WVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERIL 776
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSER+A+A+ LIS P P+ + KNLRIC DCH A K + K+ R++IVRDN RFHHF
Sbjct: 777 RYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHF 836
Query: 465 RDGKCSCGDYW 475
+G+CSCGDYW
Sbjct: 837 VNGRCSCGDYW 847
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++ A VF S+L + G LK + K +H + + F +V + N LI+MY K
Sbjct: 363 MKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 422
Query: 178 NTRLARKVFDQLRKRNLSSWHL-----MISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ A +V K + W++ MI GY + L+++ ++R+ G P++ TF
Sbjct: 423 DVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTF 478
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ CA +++G L+ +++K D ++ ++ + G G + + + +
Sbjct: 479 SSMIKGCAMQALLEQGAQLHAQVIKTD--LIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 536
Query: 292 PFEPTVEVWEALRNFAQIHG 311
+ + W A+ N HG
Sbjct: 537 EYRTDI-AWNAVINVFAQHG 555
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 115 IEYMGQ-----DASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNK 168
++Y GQ A A+A +SLL SCG + G+ +H L+ + A L N
Sbjct: 2 VKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANH 61
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI MY C + A ++F + +RN SW ++SG + N AD L F MR+ G P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121
Query: 229 KETFLVVF 236
+ + F
Sbjct: 122 RLIYETKF 129
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 115 IEYMGQ-----DASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNK 168
++Y GQ A A+A +SLL SCG + G+ +H L+ + A L N
Sbjct: 152 VKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANH 211
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
LI MY C + A ++F + +RN SW ++SG + N AD L F MR+ G P
Sbjct: 212 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271
Query: 229 K 229
+
Sbjct: 272 R 272
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
F ++ + + L +MY KC A +VFDQ+ +++ +W MI GYA NG ++ F
Sbjct: 302 FDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR 361
Query: 219 QMRKTG-PHPDKETFLVVFAACASAEAVKEGFL 250
M++ G D+ F V +A + +K+G+L
Sbjct: 362 DMKREGLVGADQHVFCSVLSA---SGGLKDGWL 391
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 206/381 (54%), Gaps = 25/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + A +L+ +C L ++ G H + + + LI+MY KC
Sbjct: 210 QKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCL 269
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
LA ++FDQL R+ ++ MI G+A +G G L LF++M G PD T +V +C
Sbjct: 270 DLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSC 329
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ V+EG FE MK YG+ P +EHY ++ +LG AG L EAEE V MP +P +
Sbjct: 330 SHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVI 389
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR------- 341
W +L A++HG++E+ + + L L+P A +++ R
Sbjct: 390 WRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKD 449
Query: 342 ---KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHD 394
K ++++E + ++ D Y K++ ++ ++ E G+ P T VL D
Sbjct: 450 HGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFD 509
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
I+EE KE AL YHSERLAIA+ LI++ P+RIIKNLR+CGDCH + K++SKI RE+I
Sbjct: 510 IEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREII 569
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFHHF++G CSC DYW
Sbjct: 570 VRDRNRFHHFKEGACSCSDYW 590
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F SL +CG+ + G+ +H +L+ D + L+ Y KC R +F+Q+
Sbjct: 111 FPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQI 170
Query: 190 RKRNLSSWHLMISGYAANGQGA--------DGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
K +L+SW+ ++S Y N + L LF +M+K+ ++ T + + +ACA
Sbjct: 171 SKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAE 230
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
A+ +G + + ++K++ + H++ A+I + G L A + +++P T+
Sbjct: 231 LGALSQGAWAHVYVLKHNL----KLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLC 286
Query: 299 VWEALRNFAQIHG 311
+ FA IHG
Sbjct: 287 YNAMIGGFA-IHG 298
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 203/358 (56%), Gaps = 25/358 (6%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+I+ G+++H ++ + + + E++N LI +Y K + A + F+ + +RN+ SW+ MI+
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
GY+ +G G + L LFE+M+ G P+ TF+ V +AC+ VKEG YFE M + +V
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLV 799
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL 322
P EHY+ ++ +LG AG L A E+++ MP +W L + IH ++E+ +RA
Sbjct: 800 PKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHH 859
Query: 323 LGDLDP----SKAIVDKIPLPPR-----------------KKQSATNMLEEKNRVSDYRS 361
L +L+P + ++ I R KK+ + +E KN V + +
Sbjct: 860 LLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYA 919
Query: 362 TD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
D L YE + LN + E GYV D+ +L++ ++ K+ HSE+LAIA+GL
Sbjct: 920 GDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGL 979
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+S +P+R++KNLR+C DCHN IK +SKI R +IVRD RFHHF G CSC D+W
Sbjct: 980 LSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L +C +L ++ +G+++H + + F +V + + LI+MY K LA ++ +L
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++ SW MI+GY + ++ L LFE+M G D F +ACA A+++G
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG-- 583
Query: 251 YFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+I Y G + I A+I + G + EA E++ + + W +L
Sbjct: 584 -QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSL 636
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C ++ ++ G ++H + D+ L L+++Y KC + A K F
Sbjct: 366 ASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTET 425
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
N+ W++M+ Y +D +F QM+ G P++ T+ + C S G LY
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL-----GALY 480
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + I G + + + VL G L A + R+P E V W A+
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAM 535
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 65/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S + +C ++++ G+++H + F D+ +NN LI +Y +C + A F+++
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N SW+ ++SG A +G + L +F +M +T + T+ +A AS +K+G
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQG 684
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L + ++ E+G+++H L+ F + + N L+ +Y + A ++F +
Sbjct: 263 VLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM 322
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ S++ +ISG G L LF +M++ PD T + +ACAS A+ +G
Sbjct: 323 NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 85 TNDPLR----GNAQLESLDVNLLSLCKEGKVR--EAIEYMGQDASASAGYDVFSSLLDSC 138
TN+ +R G S D L + ++GK + + + +M ++ + Y + LL+ C
Sbjct: 11 TNNVVRVSGVGATNSHSFDQTTLHM-EQGKSKRIQLMNFM-EERGVRSNYQNYLWLLEGC 68
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
S+ R+H + S F + L + L++ Y + + A KVFD+ R++ SW+
Sbjct: 69 LTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWN 128
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
MI + A LF +M G P+ TF V AC +
Sbjct: 129 KMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGD 173
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 127 GYDVFSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
GY F+ +L +C G + K+VH F + N LI++Y K A+KV
Sbjct: 159 GY-TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + +++ +W MISG + NG + ++LF M + P V +A +
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 246 KEG 248
+ G
Sbjct: 278 ELG 280
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 206/369 (55%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C +L +++ G +H + + + + L++MY KC LA +VF+ + +
Sbjct: 394 SLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK 453
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ +I+G A +G + LF++M++ G P+ TF+ + +AC+ A V EG
Sbjct: 454 DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLL 513
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M + YGI P +EHY +I +L AG L EA E + MP EP AL +IHG+
Sbjct: 514 DCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGN 573
Query: 313 VELEDRAEELLGDLDPSKA----IVDKIPLPPRK-----------------KQSATNMLE 351
EL + + L +L P + ++ I +K K +++E
Sbjct: 574 FELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIE 633
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREA-GYVPDTRYVLHDIDEEAKEKALQY 406
K V + + D E YEK+ ++ +++ A GY DT VL D++EE KE AL
Sbjct: 634 LKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAV 693
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIAYGL+ + +RI+KNLR+C DCH+ IK++SK+ GRE+IVRD RFHHF D
Sbjct: 694 HSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFED 753
Query: 467 GKCSCGDYW 475
G+CSC D+W
Sbjct: 754 GECSCLDFW 762
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ + KC N A +F ++ R++ SW+ M++ YA G+ + L LF+QMR G
Sbjct: 327 NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVK 386
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P + T + + +ACA A+ +G L+ ND I A++ + G + A +
Sbjct: 387 PTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
M V W + IHG+V+ A++L ++
Sbjct: 446 VFNAME-SKDVLAWNTIIAGMAIHGNVK---EAQQLFKEM 481
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ SSL+ N K + K++ L +DV N +I+ Y K AR VFD++
Sbjct: 232 IVSSLIHLYANGKDLGAAKQLFNLCSA----RDVVSWNAMIDGYVKHVEMGHARMVFDRM 287
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK-----ETFLVVFAACASAE 243
R++ SW+ MI+GYA G+ + LF++M P++ + L F C + E
Sbjct: 288 VCRDVISWNTMINGYAIVGKIDEAKRLFDEM------PERNLVSWNSMLAGFVKCGNVE 340
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ ++ +C G VH + S F D + + LI +Y + A+++F+
Sbjct: 197 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 256
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
R++ SW+ MI GY + + M+F++M
Sbjct: 257 SARDVVSWNAMIDGYVKHVEMGHARMVFDRM 287
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 200/359 (55%), Gaps = 34/359 (9%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ +H F +L L++MY K ++AR +F+QL KR L SW+ MI GY
Sbjct: 283 GRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGM 342
Query: 207 NGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
+G + L LF +M+ PD TF+ V +AC V+E +F +M N Y I P +
Sbjct: 343 HGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTV 402
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGD 325
+HY +I VLG G EA + ++ M EP +W AL N +IH +VEL + A + L +
Sbjct: 403 QHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIE 462
Query: 326 LDPS-------------------KAIVDKIPLPPR--KKQSATNMLEEKNRVSDY----- 359
L+P KA + + R KK A + +E K + +
Sbjct: 463 LEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDA 522
Query: 360 ---RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG 416
RS ++Y GE E+++GL M +AGYVPD V H++D++ K ++ HSERLAIA+G
Sbjct: 523 SHPRSDEIY-GELERLEGL---MSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFG 578
Query: 417 LISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LISTPP L + KNLR+C DCH IK++S+IV RE+I+RD R+HHF +G+CSC DYW
Sbjct: 579 LISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
AS+ Y +S+L SC S+ G+++H L S D L+ KL+++Y C
Sbjct: 56 ASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGH 115
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD + KRN+ W+++I YA G + L+ M + G PD T+ +V ACA+
Sbjct: 116 ARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAA 175
Query: 242 AEAVKEG 248
++ G
Sbjct: 176 LLDLETG 182
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C L +E G+ VH+ + + + +DV + +++MY KC AR VFD +
Sbjct: 166 YPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIA 225
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
R+ W+ MI+ Y NG+ + L L M G P T
Sbjct: 226 VRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATL 267
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 207/368 (56%), Gaps = 26/368 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+ +C L S+ +G+ H D + LI+MY K + + KVF+ L++++
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 662
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+SW+ MI GY +G + + LFE+M++TG +PD TFL V AC + + EG Y +
Sbjct: 663 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 722
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQIHGD 312
MK+ +G+ P ++HY +I +LG AG L +A V E M E V +W++L + +IH +
Sbjct: 723 QMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 782
Query: 313 VELEDRAEELLGDLDPSK---------------------AIVDKIPLPPRKKQSATNMLE 351
+E+ ++ L +L+P K + ++ +K + + +E
Sbjct: 783 LEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+V + + + +E++K L ++ + GY PDT V HD+ EE K + L+ H
Sbjct: 843 LNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGH 902
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ YGLI T +R+ KNLRIC DCHNA K++SK++ RE++VRDNKRFHHF++G
Sbjct: 903 SEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 962
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 963 VCSCGDYW 970
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 104 SLCKEGKV----REAIEYMGQDASASAGY----DVFSSLLDSCGNLKSIEMGKRVHELLR 155
+ C+ G + R E++G D S+S + + LL + G K IEMG+++H+L+
Sbjct: 52 NFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVS 111
Query: 156 TSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGL 214
S ++ D L ++I MY C + +R VFD LR +NL W+ +IS Y+ N + L
Sbjct: 112 GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVL 171
Query: 215 MLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
F E + T PD T+ V ACA V G ++ G+V + A++
Sbjct: 172 ETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVS 230
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
G+ G + +A + + MP E + W ++ ++ D + + LLG++
Sbjct: 231 FYGTHGFVTDALQLFDIMP-ERNLVSWNSM---IRVFSDNGFSEESFLLLGEM 279
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C LKS+ +GK VH + + +D+ + ++ +Y C + +FD + +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+L SW+ +I+GY NG L +F QM G + + VF AC+ +++ G
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ ++ +C + + +G VH L+ + V+DV + N L+ YG A ++FD +
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLF-EQMRKTGP---HPDKETFLVVFAACASAEAVK 246
+RNL SW+ MI ++ NG + +L E M + G PD T + V CA +
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 247 EG 248
G
Sbjct: 310 LG 311
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L C + I +GK VH K++ LNN L++MY KC A+ +F +
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAAC----------- 239
N+ SW+ M+ G++A G + QM G D+ T L C
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 240 ASAEAVKEGFLYFEIMKNDY 259
++K+ F+Y E++ N +
Sbjct: 417 LHCYSLKQEFVYNELVANAF 436
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K +H FV + + N + Y KC + A++VF +R + ++SW+ +I G+A +
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----EGFLYFEIMKNDYGIV 262
L QM+ +G PD T + +AC+ ++++ GF+ ++ D +
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV- 533
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
Y++++ + G L + + M
Sbjct: 534 -----YLSVLSLYIHCGELCTVQALFDAM 557
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 221/411 (53%), Gaps = 27/411 (6%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEY--MGQDASASAGYDVFSSLLDSCGNLKSIEMGKR 149
++ L S + + +L +E +EAIE + Q +A + +CG L ++++ K
Sbjct: 435 DSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKW 494
Query: 150 VHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ 209
+H ++ D+ L L++M+ +C + + A +VF+++ KR++S+W I A G
Sbjct: 495 IHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGN 554
Query: 210 GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI 269
G + LF++M + G PD F+ + A + V++G+ F MK+ YGI P HY
Sbjct: 555 GTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYG 614
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS 329
++ +LG AG L EA + M EP +W +L ++H +V++ A E + +LDP
Sbjct: 615 CMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPE 674
Query: 330 KA-----------------IVDKIPLPPRKKQS----ATNMLEEKNRVSDYRSTDLYRGE 368
+ V K+ L ++K + ++ +E ++ ++ + D E
Sbjct: 675 RTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPE 734
Query: 369 YEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRM 424
+K + ++R+ GYVPD VL D++E+ KE L HSE+LAIA+ LIST M
Sbjct: 735 MTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGM 794
Query: 425 PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+R+ KNLRIC DCH+ K++SK RE+IVRDN RFH F+ G CSCGDYW
Sbjct: 795 PIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 55/265 (20%)
Query: 30 SAHSVTLKSSSPVKLLCAYATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTG----HSQNT 85
+ H TL ++P + A PN + K + +P+ + ++ KT T HSQ T
Sbjct: 4 TLHLSTLIPATPTSV----ALPNQNELK--ILTKHRSSPTGSFKKCKTMTELKQLHSQIT 57
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEY--------------MGQD---------- 121
+ L N SL NL+S C E E++EY MG
Sbjct: 58 KNGL--NHHPLSL-TNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGF 114
Query: 122 ASASAGYD------------------VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
++ GY F +L +C ++ G +VH + F +D+
Sbjct: 115 SACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDM 174
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ N LI YG+C R+VFD++ +RN+ SW +I GYA G + + LF +M +
Sbjct: 175 FVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEV 234
Query: 224 GPHPDKETFLVVFAACASAEAVKEG 248
G P+ T + V +ACA + ++ G
Sbjct: 235 GIRPNSVTMVGVISACAKLQDLQLG 259
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ +C L+ +++G++V + + + N L++MY KC ARK+FD+ +N
Sbjct: 246 VISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKN 305
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L ++ ++S Y G + L + +M K GP PD+ T L +AC+ + V G
Sbjct: 306 LVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG 360
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 7/177 (3%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFSSL--LDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++G RE + +G+ D + L + +C L + GK H + +
Sbjct: 318 RQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDN 377
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N +I MY KC +A +VFD++ + SW+ +I+G+ NG +F M
Sbjct: 378 VCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAM---- 433
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
P D ++ + A KE F +M+++ GI + + G G L
Sbjct: 434 PDSDLVSWNTMIGALVQESMFKEAIELFRVMQSE-GITADKVTMVGVASACGYLGAL 489
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 61/270 (22%)
Query: 200 MISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY 259
+I G++A G G +++F Q+ G PD TF V +AC + A+ EGF
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGF---------- 159
Query: 260 GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRA 319
+ + AI+K M FE + V +L +F +G+
Sbjct: 160 ------QVHGAIVK-----------------MGFERDMFVENSLIHF---YGEC------ 187
Query: 320 EELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNGQM 379
G++D + + DK+ S N++ + + Y RG Y++ L +M
Sbjct: 188 ----GEIDCMRRVFDKM--------SERNVVSWTSLIGGYAK----RGCYKEAVSLFFEM 231
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG--LISTPPRMPLRIIKNLRICGD 437
E G P++ ++ I AK + LQ E++ G + M ++ CG
Sbjct: 232 VEVGIRPNSVTMVGVISACAKLQDLQL-GEQVCTCIGELELEVNALMVNALVDMYMKCGA 290
Query: 438 CHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
A KI + V + L++ + ++ R G
Sbjct: 291 IDKARKIFDECVDKNLVLYNTIMSNYVRQG 320
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 206/381 (54%), Gaps = 25/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q + A +L+ +C L ++ G H + + + LI+MY KC
Sbjct: 142 QKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCL 201
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
LA ++FDQL R+ ++ MI G+A +G G L LF++M G PD T +V +C
Sbjct: 202 DLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSC 261
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ V+EG FE MK YG+ P +EHY ++ +LG AG L EAEE V MP +P +
Sbjct: 262 SHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVI 321
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR------- 341
W +L A++HG++E+ + + L L+P A +++ R
Sbjct: 322 WRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKD 381
Query: 342 ---KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHD 394
K ++++E + ++ D Y K++ ++ ++ E G+ P T VL D
Sbjct: 382 HGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFD 441
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
I+EE KE AL YHSERLAIA+ LI++ P+RIIKNLR+CGDCH + K++SKI RE+I
Sbjct: 442 IEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREII 501
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFHHF++G CSC DYW
Sbjct: 502 VRDRNRFHHFKEGACSCSDYW 522
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 205/376 (54%), Gaps = 38/376 (10%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +CG+ ++ +GK++H + + ++ L N LI+MY KC AR VF+ ++
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW MIS Y +G+G D + LF +++ +G PD F+ AAC+ A ++EG
Sbjct: 372 SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 431
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F++M + Y I P +EH ++ +LG AG + EA F++ M EP VW AL ++H
Sbjct: 432 CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATNMLE--------------- 351
D ++ A + L L P ++ ++ I + + TN+
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASN 551
Query: 352 -EKNRV---------SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
E NR+ S +S ++YR ++ L +M+E GYVPD+ LHD++EE KE
Sbjct: 552 VEVNRIIHTFLVGDRSHPQSDEIYR----ELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Query: 402 KALQYHSERLAIAYGLISTP-----PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
L HSE+LAI + L++T +RI KNLRICGDCH A K++S+I RE+I+R
Sbjct: 608 THLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIR 667
Query: 457 DNKRFHHFRDGKCSCG 472
D RFH FR G CSC
Sbjct: 668 DTNRFHVFRFGVCSCA 683
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 8/203 (3%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLR 155
++V + S G E ++ G + D F +L +C +I +G+++H
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167
Query: 156 TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+ + N L+ MYGKC AR V D++ +R++ SW+ ++ GYA N + D L
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
+ +M D T + A ++ E +Y + M G + + +I V
Sbjct: 228 VCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMG-KKSLVSWNVMIGVY 284
Query: 276 GSAGHLIEAEEFVERMP---FEP 295
+EA E RM FEP
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEP 307
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +LD+ +++++ + VH + + L KL+ Y + ARKVFD++
Sbjct: 44 LLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN+ ++MI Y NG +G+ +F M PD TF V AC+ + + G
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG- 159
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G+ + ++ + G G L EA ++ M V W +L
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS-WNSL 212
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 13/231 (5%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
N + +F ++ K++L SW++MI Y N + + L+ +M G PD + V
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 238 ACASAEAVKEG---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
AC A+ G Y E K ++P + A+I + G L +A + E M
Sbjct: 318 ACGDTSALSLGKKIHGYIERKK----LIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 295 PTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKN 354
V W A+ + G A L L S + D I + L E+
Sbjct: 374 DVVS-WTAMISAYGFSGR---GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 355 RVSDYRSTDLYR--GEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
R TD Y+ E + + + AG V + + D+ E E+
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV 480
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 203/358 (56%), Gaps = 25/358 (6%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
+I+ G+++H ++ + + + E++N LI +Y K + A + F+ + +RN+ SW+ MI+
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
GY+ +G G + L LFE+M+ G P+ TF+ V +AC+ VKEG YFE M + +V
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLV 799
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEEL 322
P EHY+ ++ +LG AG L A E+++ MP +W L + IH ++E+ +RA
Sbjct: 800 PKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHH 859
Query: 323 LGDLDP----SKAIVDKIPLPPR-----------------KKQSATNMLEEKNRVSDYRS 361
L +L+P + ++ I R KK+ + +E KN V + +
Sbjct: 860 LLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYA 919
Query: 362 TD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGL 417
D L YE + LN + E GYV D+ +L++ ++ K+ HSE+LAIA+GL
Sbjct: 920 GDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGL 979
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+S +P+R++KNLR+C DCHN IK +SKI R +IVRD RFHHF G CSC D+W
Sbjct: 980 LSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ S+L +C +L ++ +G+++H + + F +V + + LI+MY K LA ++ +L
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++ SW MI+GY + ++ L LFE+M G D F +ACA A+++G
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG-- 583
Query: 251 YFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+I Y G + I A+I + G + EA E++ + + W +L
Sbjct: 584 -QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSL 636
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+SLL +C ++ ++ G ++H + D+ L L+++Y KC + A K F
Sbjct: 366 ASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTET 425
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
N+ W++M+ Y +D +F QM+ G P++ T+ + C S G LY
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL-----GALY 480
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + I G + + + VL G L A + R+P E V W A+
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAM 535
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 65/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S + +C ++++ G+++H + F D+ +NN LI +Y +C + A F+++
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+N SW+ ++SG A +G + L +F +M +T + T+ +A AS +K+G
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQG 684
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS+L + ++ E+G+++H L+ F + + N L+ +Y + A ++F +
Sbjct: 263 VLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM 322
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+ S++ +ISG G L LF +M++ PD T + +ACAS A+ +G
Sbjct: 323 NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 85 TNDPLR----GNAQLESLDVNLLSLCKEGKVR--EAIEYMGQDASASAGYDVFSSLLDSC 138
TN+ +R G S D L + ++GK + + + +M ++ + Y + LL+ C
Sbjct: 11 TNNVVRVSGVGATNSHSFDQTTLHM-EQGKSKRIQLMNFM-EERGVRSNYQNYLWLLEGC 68
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
S+ R+H + S F + L + L++ Y + + A KVFD+ R++ SW+
Sbjct: 69 LTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWN 128
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
MI + A LF +M G P+ TF V AC +
Sbjct: 129 KMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGD 173
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 127 GYDVFSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
GY F+ +L +C G + K+VH F + N LI++Y K A+KV
Sbjct: 159 GY-TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + +++ +W MISG + NG + ++LF M + P V +A +
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 246 KEG 248
+ G
Sbjct: 278 ELG 280
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 205/370 (55%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C +L +IE+G+ +H + R LI+MY KC + A++VFD +
Sbjct: 341 SILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSIL 400
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+LSSW+ MI G+A +G+ +F +MRK PD TF+ + +AC+ + + G
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 460
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F MK DY I P +EHY +I +LG +G EAEE + M EP +W +L +++
Sbjct: 461 IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMY 520
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPP-----------------RKKQSATNM 349
+VEL + + L ++P S ++ I KK +
Sbjct: 521 ANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSS 580
Query: 350 LEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D + R Y ++ + + EAG+VPDT VL +++EE KE AL+
Sbjct: 581 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALR 640
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHHFR
Sbjct: 641 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFR 700
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 701 DGVCSCNDYW 710
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 4/206 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +EA+E + + D S++ +C SIE+G++VH + F ++++
Sbjct: 214 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N LI++Y KC A +F+ L +++ SW+ +I GY + L+LF++M ++G
Sbjct: 274 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P+ T L + ACA A++ G +++ I K G+ H ++I + G IEA
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGD-IEAA 392
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
+ V ++ W A+ +HG
Sbjct: 393 QQVFDSILNRSLSSWNAMIFGFAMHG 418
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
F LL SC K+ G+++H + + D+ ++ LI MY + N RL ARKVFD
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQ--NGRLEDARKVFD 162
Query: 188 QLRKRNLSS-------------------------------WHLMISGYAANGQGADGLML 216
Q R++ S W+ MISGYA G + L L
Sbjct: 163 QSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALEL 222
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLG 276
F++M KT PD+ T + V +ACA + +++ G + +D+G ++ A+I +
Sbjct: 223 FKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI-DDHGFGSNLKIVNALIDLYI 281
Query: 277 SAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A E + ++ + W L
Sbjct: 282 KCGEVETACGLFEGLSYKDVIS-WNTL 307
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCC------NTRLARKV 185
SLL +C L+S+ M +H ++++T + L+ KLIE C A V
Sbjct: 7 SLLHNCKTLQSLRM---IHAQMIKTGLHNTNYALS-KLIEF---CVLSPHFDGLPYAISV 59
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ +++ NL W+ M G+A + L L+ M G P+ TF + +CA ++A
Sbjct: 60 FETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 119
Query: 246 KEG 248
+EG
Sbjct: 120 REG 122
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 201/374 (53%), Gaps = 33/374 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L CG L + +GKR+HE+++ ++ L N L++MY C + AR++FD +
Sbjct: 296 LATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMS 355
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW +IS Y +G G + + LFE+M G PD F+ V AAC+ A + +G
Sbjct: 356 ARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH 415
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+ M + Y I+P EHY ++ +LG AG + EA +F+ M EP VW AL +IH
Sbjct: 416 YFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIH 475
Query: 311 GDVELEDRAEELLGDLDPSK-------------------------AIVDKIPLPPRKKQS 345
++++ A + L L P + +V+K KK
Sbjct: 476 SNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNK----GIKKFP 531
Query: 346 ATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKE 401
T+++E ++V + D + Y K+ L G++R GY P+ LHD++EE KE
Sbjct: 532 GTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKE 591
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L HSE+LAIA+ L++T P +R+ NLR C DCH A K++S I RE++++D R
Sbjct: 592 DHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRI 651
Query: 462 HHFRDGKCSCGDYW 475
HH G CSCGDYW
Sbjct: 652 HHIVQGVCSCGDYW 665
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+ R R+VFD ++ + L SW+ M++ YA N + LF M K PD T V
Sbjct: 242 DIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLP 301
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
C A G EI+K + P + A++ + S G L +A E + M +
Sbjct: 302 PCGELSAFSVGKRIHEIIKRK-NMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVI 360
Query: 298 EVWEALRNFAQIHGD-VELEDRAEELLGD-LDP 328
W ++ + HG E D E++LG L+P
Sbjct: 361 S-WTSIISAYGKHGHGREAVDLFEKMLGQGLEP 392
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L SC K + +G ++H + ++V + + I MY +C A +VFD + R++
Sbjct: 130 LKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDV 189
Query: 195 SSWHLMISGYAANGQGADGLMLFEQ-MRKTGPHPDKETFLVVFAACASAE 243
SW+ MI+G+A G + +F+Q + G PD T + A +A+
Sbjct: 190 VSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAK 239
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 202/367 (55%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L + +L ++E+ + V + K V L N LI+ KC + A VF+ +++R+
Sbjct: 236 VLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRS 295
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW +I A G+G + + +FE+M+ G PD F+ V AC+ A V EG YF+
Sbjct: 296 VVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFD 355
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
MK +YGI P IEHY ++ + G AG + A EFV MP +P +W +L + + HG +
Sbjct: 356 AMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRL 415
Query: 314 EL-EDRAEELLGDLDPSKA----IVDKIPLPPR----------------KKQSATNMLEE 352
EL E LL + +A + + L R KK +++E
Sbjct: 416 ELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVEL 475
Query: 353 KNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
V ++ + D Y+ Y ++ + ++R G++ T VL D+DEE KE ALQ+HS
Sbjct: 476 DGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHS 535
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+ L+ TPP +R++KNLR+C DCH AIK +S++ RE++VRD RFH F+DG
Sbjct: 536 EKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGS 595
Query: 469 CSCGDYW 475
CSC D+W
Sbjct: 596 CSCKDFW 602
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 131 FSSLLDSCGNLK-SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFD 187
F LL +C L S ++G + H F D ++N LI MY L AR VFD
Sbjct: 129 FPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFD 188
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ K + +W MI GY G +D + LF +M+ G D+ T + V AA A++
Sbjct: 189 RMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALEL 248
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ + GI + A+I L G + A E M + +V W ++ +
Sbjct: 249 ARWVRRFVERE-GIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQ-QRSVVSWTSVIDAL 306
Query: 308 QIHG 311
+ G
Sbjct: 307 AMEG 310
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 211/373 (56%), Gaps = 27/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD-VELNNKLIEMYGKCCNTRLARKVFDQ 188
F ++L +C ++E G+ +H +R + L N ++ MYGKC + + A +F
Sbjct: 307 TFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKS 366
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL-VVFAACASAEAVKE 247
+ + ++ +W+ MI+ Y +G ++ L +E M++ G PD T++ V+ A+CA+A +E
Sbjct: 367 MSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEE 426
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
YF M+ D+G+ PG HY +++ LG AG L +AE ++ MPFEP V W +
Sbjct: 427 AHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANC 486
Query: 308 QIHGDVELEDRAEELLGDLDPSKAI----VDKIPLPPRKKQSATN----MLEEKNRVSDY 359
+ HGD++ A + +DP + + +I Q A+ ML+ R +
Sbjct: 487 RSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAG 546
Query: 360 RS-----TDLYR---GE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
RS T +Y G+ ++++K L+ +M+ AGY PD +V HD++ KE
Sbjct: 547 RSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEP 606
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSERLAIA+G+IST P PLRI+KNLR+CGDCH K+ SKI RE+IVRD+ RFH
Sbjct: 607 LLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFH 666
Query: 463 HFRDGKCSCGDYW 475
HF++G CSC D+W
Sbjct: 667 HFKNGSCSCKDFW 679
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ SC L ++ G+R+H+L+R DV ++N L+ MYGKC + AR VF+ +N
Sbjct: 40 VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ SW ++I+ A +G+ + L LF +M K G P +F AC++
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ YG + +++ + G L E+ E M EP W A+
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMT-EPNAVSWNAM 208
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 19/171 (11%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
DV + L+ MY KC A F +L++ N+ +W+++IS Y + + + LF +M
Sbjct: 238 DVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRML 297
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIA---------II 272
G D+ TF+ + AC A+++G ++ EH +A I+
Sbjct: 298 LLGLEMDEVTFINILGACCVPVALEDGRAIHACVR---------EHPLASNHAPLENVIL 348
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL 323
+ G G L +AE + M +P V W + HG R EL+
Sbjct: 349 NMYGKCGSLQDAEAMFKSMS-QPDVIAWNTMIAAYGQHGHTSEALRFYELM 398
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F++ +++C + + G+ +H LLR F V L+ MY KC + + + F+ +
Sbjct: 138 FTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESM 197
Query: 190 RKRNLSSWHLMISGYAANGQGADGL-----MLFEQMRKTGPHPDKETFLVVFAACASAEA 244
+ N SW+ MI+ +A + +G + L M E +R T + ++A C+
Sbjct: 198 TEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHD 257
Query: 245 VKEGFLYFE 253
F+ +
Sbjct: 258 ANAAFVKLQ 266
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 212/385 (55%), Gaps = 35/385 (9%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+DA S+ +S+L +C + +E G++VH + +D+ L+N L++MY KC +
Sbjct: 261 KDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHA--HVLKYDRDLILHNALLDMYCKCGSL 318
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
A +F ++ +R++ SW M+SG A NG+ + L +F+ M+ G P+ T + V AC
Sbjct: 319 EDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFAC 378
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ A V++G+ YF MK +GI P EH+ ++ +LG AG L EA EF+ M EP +
Sbjct: 379 SHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVI 438
Query: 300 WEALRNFAQIHGDVEL-------------EDRAEELL-----GDL-------DPSKAIVD 334
W L ++H + L +D+ +L DL P KA+ D
Sbjct: 439 WRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRD 498
Query: 335 KIPLPPRKKQSATNMLEEKNRVSDYRSTDLYR----GEYEKMKGLNGQMREAGYVPDTRY 390
+ +K+ + +E + RV + + DL +++ L G+++ GYVP T +
Sbjct: 499 R----GMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEF 554
Query: 391 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVG 450
VL D+ E KE L+YHSE++AI +G + P+RI+KNLRICGDCH K++SK G
Sbjct: 555 VLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEG 614
Query: 451 RELIVRDNKRFHHFRDGKCSCGDYW 475
R +++RD RFHHF+DG CSCGDYW
Sbjct: 615 RVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSI 144
P+R ++ L S +G+ +EA+ + M +D A Y FSS+L +C +
Sbjct: 131 PVRNVVTWTTVVAALAS--ADGRKQEALRFLVAMRRDGVAPNAY-TFSSVLGAC---TTP 184
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
M VH + DV + + LI+ Y K + R+VFD++ R+L W+ +I+G+
Sbjct: 185 GMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGF 244
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVP 263
A +G G + LF +M+ G ++ T V AC ++ G ++ ++K D ++
Sbjct: 245 AQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLIL 304
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A++ + G L +A+ RMP + + AQ VE
Sbjct: 305 ----HNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVE 351
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA-ANGQGADGLMLFEQMRKT 223
++N L MY K A ++FD + RN+ +W +++ A A+G+ + L MR+
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD 165
Query: 224 GPHPDKETFLVVFAACAS 241
G P+ TF V AC +
Sbjct: 166 GVAPNAYTFSSVLGACTT 183
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 211/374 (56%), Gaps = 29/374 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F + +C NL S GK++H L ++++ + +NN LI +Y K N AR+VFD++
Sbjct: 348 FVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRM 407
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ N S++ MI GYA +G G + L L+++M +G P+ TF+ + +ACA V EG
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQ 467
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK + I P EHY +I +LG AG L EAE F++ MP++P W AL +
Sbjct: 468 KYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK 527
Query: 310 HGDVELEDRAEELLGDLDPSKAI--------------------VDKIPLPPR-KKQSATN 348
H ++ L +RA + L + P A V K R +K+ +
Sbjct: 528 HKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCS 587
Query: 349 MLEEKNR----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA- 403
+E K + V++ S + R E ++ + +M++ GYV D ++ + DE + +
Sbjct: 588 WIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEE 647
Query: 404 --LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
L +HSE+LA+A+GL+ST + ++KNLRICGDCHNAIK MS + GRE+IVRDN RF
Sbjct: 648 MRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRF 707
Query: 462 HHFRDGKCSCGDYW 475
H F+DGKCSCGDYW
Sbjct: 708 HCFKDGKCSCGDYW 721
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN---TRLAR 183
D+F+ S+L++ +L + G++ H L + F ++ + + LI+ Y KC +
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSE 298
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGA-DGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
KVF ++ +L W+ MISGY+ N + + + + F QM++ G PD +F+ V +AC++
Sbjct: 299 KVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 243 EAVKEGFLYFEIMKNDYGI-----VPG--IEHYIAIIKVLGSAGHLIEAEEFVERMPFEP 295
+ +G K +G+ +P I A+I + +G+L++A +RMP
Sbjct: 359 SSPSQG-------KQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELN 411
Query: 296 TVEVWEALRNFAQIHG 311
V ++ +AQ HG
Sbjct: 412 AVSFNCMIKGYAQ-HG 426
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ F LL + + GK +H L S L+N + +Y KC AR FD
Sbjct: 8 FKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFD 67
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ N+ S+++++ YA + + LF++ P PD ++ + + A A
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDE----NPQPDTVSYNTLISGYADARETVA 123
Query: 248 GFLYFEIMK 256
+ F+ M+
Sbjct: 124 AMVLFKRMR 132
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N +++ Y K +AR++FD+ + + S++ +ISGYA + ++LF++MR+ G
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137
Query: 227 PDKETFLVVFAAC 239
D T + AAC
Sbjct: 138 VDGFTLSGLIAAC 150
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 207/373 (55%), Gaps = 32/373 (8%)
Query: 134 LLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++ +C N+ S G++VH L L+ + +NN LI MY KC N R A+ +FD + +
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEH 408
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N S++ MI+GYA +G G L LF++M + P TF+ V AACA V++G +YF
Sbjct: 409 NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYF 468
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+MK +GI P H+ +I +LG AG L EAE +E +PF+P W AL +IHG+
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGN 528
Query: 313 VELEDRAEELLGDLDP--------------------SKAIVDKIPLPPR--KKQSATNML 350
VEL +A L LDP A V K+ + R KK+ + +
Sbjct: 529 VELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKL-MRDRGVKKKPGCSWI 587
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKGLNGQM----REAGYVPDTRYVLHDIDEEA----KEK 402
E R+ + + D + +K++ +M ++ GY P+ R D+ +E
Sbjct: 588 EVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEEL 647
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSE+LA+++GL+ST P+ + KNLRIC DCHNAIK +S++V RE+ VRD+ RFH
Sbjct: 648 RLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFH 707
Query: 463 HFRDGKCSCGDYW 475
F+DG+CSCG YW
Sbjct: 708 CFKDGQCSCGGYW 720
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-ARKV 185
D+F+ S+L + N++ + G + H L S + ++ + + LI++Y KC L RKV
Sbjct: 239 DIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKV 298
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGAD-GLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
FD++ +L W+ MISGY+ +D L F Q++ G PD + + V +AC++ +
Sbjct: 299 FDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSS 358
Query: 245 VKEG------FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
+G L +I N + A+I + G+L +A+ + MP TV
Sbjct: 359 PSQGRQVHGLALKLDIPSNRISVNN------ALIAMYSKCGNLRDAKTLFDTMPEHNTVS 412
Query: 299 VWEALRNFAQIHG 311
+ +AQ HG
Sbjct: 413 YNSMIAGYAQ-HG 424
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L +C + + GK +H L S L+N + +Y KC AR+VFD
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
N+ S++ +IS YA LF++M P PD ++ + AA A + F
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAFQ 126
Query: 251 YFEIMKNDY 259
F M+ +
Sbjct: 127 LFLEMREAF 135
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 207/372 (55%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F+SLL + + G+++H L + F D ++N L+ MY +C A + FD++
Sbjct: 452 TFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEM 511
Query: 190 RK-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ SW +IS A +G L LF M +G P+ T++ V +AC+ VKEG
Sbjct: 512 EDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEG 571
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
YF M+ D+ ++P +EHY ++ +L +G + EA EF+ MP + VW+ L +
Sbjct: 572 KEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACR 631
Query: 309 IHGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPR----KKQSAT 347
+ ++E+ + A + DL+P V +I R K++
Sbjct: 632 TYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGL 691
Query: 348 NMLEEKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ + N + ++R+ D R + Y K+ L ++++ GYVPDT VLHD+ ++ KE+
Sbjct: 692 SWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQC 751
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE++A+A+GLI+T P P+RI KNLR+C DCH+AIK +SK GRE+I+RD+ RFH
Sbjct: 752 LLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHR 811
Query: 464 FRDGKCSCGDYW 475
+DGKCSCG+YW
Sbjct: 812 MKDGKCSCGEYW 823
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Query: 146 MGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK-RNLSSWHLMISG 203
+G+ +H LL T D + N L+ MY KC + R AR+VFD +R R+L SW M
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG---FLYFEIMKNDYG 260
NG + L+L +M ++G P+ T AC E + L F I +G
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
+ A+I + G L+ A + + E TV VW
Sbjct: 181 --TDVSVGCALIDMFARNGDLVAARKVFNGL-VERTVVVW 217
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK 168
GK E M +D GY SS++ +C S +G+++H L+ V D ++
Sbjct: 231 GKAVELFLGMLEDGFEPDGY-TMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCG 289
Query: 169 LIEMYGKCC---NTRLARKVFDQLRKRNLSSWHLMISGYA-ANGQGADGLMLFEQMRKTG 224
L++MY K + ARKVF ++ N+ SW +ISGY GQ + + L +M
Sbjct: 290 LVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNES 349
Query: 225 PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
P+ T+ + ACA+ G ++ +MK G V + + A++ + +G + E
Sbjct: 350 IEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGN--ALVSMYAESGCMEE 407
Query: 284 A----EEFVERMPFEPTVEVWEALRNFAQIHGDVELED 317
A ++ ER + ++ E R+ A +E D
Sbjct: 408 ARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMD 445
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 87 DPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSC--GNLK 142
D +RG L S L + G +EA+ +G+ + + F+ + +C G L
Sbjct: 103 DGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELF 162
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
G + ++T + DV + LI+M+ + + ARKVF+ L +R + W LMI+
Sbjct: 163 RSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMIT 222
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
Y G + LF M + G PD T + +ACA
Sbjct: 223 RYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACA 260
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 205/371 (55%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ L +C L ++E GK +H L + D L LI+MY KC + A +VF ++
Sbjct: 279 LANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQ 338
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ +W +ISGYA +G G + + F +M+K G P+ TF V AC+ V+EG L
Sbjct: 339 RKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKL 398
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M+ DY + P IEHY ++ +L AG L EA+ F++ MP +P +W AL +IH
Sbjct: 399 IFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 458
Query: 311 GDVELEDRAEELLGDLDP-------SKAIVDKIPLPPRKKQSATNMLEEK---------- 353
++EL + E+L +DP KA + + K +++E+
Sbjct: 459 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCST 518
Query: 354 ----NRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPD-TRYVLHDIDEEAKEKAL 404
++ + D E EK+ K + ++ E GYVP+ +L +D++ +E +
Sbjct: 519 ISLEGTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIV 578
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAI YGLI T P +RI+KNLR+C DCH K++SKI R++++RD RFHHF
Sbjct: 579 HQHSEKLAITYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHF 638
Query: 465 RDGKCSCGDYW 475
RDGKCSCGDYW
Sbjct: 639 RDGKCSCGDYW 649
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F SLL +C NL ++E ++H + + DV N LI Y N +LA +FD++
Sbjct: 146 TFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRI 205
Query: 190 RK-------------------------------RNLSSWHLMISGYAANGQGADGLMLFE 218
K +N SW MISGY G + L LF
Sbjct: 206 PKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFH 265
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGI--VPGIEHYIAIIKVL 275
+M+ + PD + +ACA A+++G +++ + K + V G +I +
Sbjct: 266 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLG----CVLIDMY 321
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + EA E + + +V+ W AL + HG
Sbjct: 322 AKCGDMGEALEVFKNIQ-RKSVQAWTALISGYAYHG 356
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 205/372 (55%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++S+L + L ++ GK+VH + S V L N LI+MY KC N AR++FD +
Sbjct: 295 YASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 354
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF 249
+R SW+ M+ GY+ +G + L LF+ MR+ PD T+L V + C+ + G
Sbjct: 355 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 414
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++ GI P I HY ++ +LG AG + EA +F+++MPF PT +W +L +
Sbjct: 415 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCR 474
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
+H DVE+ + L +L+P A I D + K+
Sbjct: 475 VHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGR 534
Query: 348 NMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E V + ++D E K+K L+ + +E GYVPD VL+D+DEE KEK
Sbjct: 535 SWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKV 594
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GLI+TP +R+IKNLRIC DCH+ K +S++ R +I+RD RFH+
Sbjct: 595 LLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHN 654
Query: 464 FRDGKCSCGDYW 475
G CSCGDYW
Sbjct: 655 IVGGVCSCGDYW 666
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 101 NLLSLCKEGKVREAIEYM---GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
NL +LC G+++EA+ M G++ GYD ++L+ C + ++I G+RVH + +
Sbjct: 64 NLKTLCSSGQLKEALLQMAILGREVKFE-GYD---TILNECVSQRAIREGQRVHTHMIKT 119
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
++ V L +LI +Y KC AR++FD++ ++N+ SW MIS Y+ G + L LF
Sbjct: 120 CYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLF 179
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI-MKNDYGIVPGIEHYI----AII 272
+M ++ P+ TF + +C + + G I +K +Y E ++ +++
Sbjct: 180 VEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNY------ESHMFVGSSLL 233
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ +G + +A +P V + +AQ+ D E
Sbjct: 234 DMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L SC E G+++H + + + + + L++MY K A VF L
Sbjct: 194 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ + +ISGYA G + L LF Q++ G + + T+ V A + A+ G
Sbjct: 254 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313
Query: 250 LYFEIMKN-DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ ++++ Y V + ++I + G++ A + MP E T W A+
Sbjct: 314 VHSHVLRSGQYSYVVLLN---SLIDMYSKCGNVCYARRIFDSMP-ERTCISWNAMLVGYS 369
Query: 309 IHG 311
HG
Sbjct: 370 KHG 372
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 204/370 (55%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS++ C +E G ++H + + ++D + + L++MYGKC L+ ++F+++
Sbjct: 248 FSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIE 307
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R +W+ +I+ +A +G G + + F++M +G P+ F+ + AC+ A V EG
Sbjct: 308 YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLK 367
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF MK +GI P EHY II G AG L EA +F+ MP +P W +L ++
Sbjct: 368 YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMR 427
Query: 311 GDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNM 349
G EL + A + L L+P KA+ + KK +
Sbjct: 428 GSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSW 487
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ + + S D + YEK++ L +++E GY+PDT ++ ++++ AKE+ L+
Sbjct: 488 VDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILR 547
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSER+A+A+ LIS P P+ + KNLRIC DCH A K + K+ R++IVRDN RFHHF
Sbjct: 548 YHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFV 607
Query: 466 DGKCSCGDYW 475
+G+CSCGDYW
Sbjct: 608 NGRCSCGDYW 617
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++ A VF S+L + G LK + K +H + + F +V + N LI+MY K
Sbjct: 133 MKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 192
Query: 178 NTRLARKVFDQLRKRNLSSWHL-----MISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ A +V K + W++ MI GY + L+++ ++R+ G P++ TF
Sbjct: 193 DVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTF 248
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ CA +++G L+ +++K D ++ ++ + G G + + + +
Sbjct: 249 SSMIKGCAMQALLEQGAQLHAQVIKTD--LIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 306
Query: 292 PFEPTVEVWEALRNFAQIHG 311
+ + W A+ N HG
Sbjct: 307 EYRTDI-AWNAVINVFAQHG 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F ++ + + L +MY KC A +VFDQ+ +++ +W MI GYA NG ++ F
Sbjct: 71 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 130
Query: 218 EQMRKTG-PHPDKETFLVVFAACASAEAVKEGFL 250
M++ G D+ F V +A + +K+G+L
Sbjct: 131 RDMKREGLVGADQHVFCSVLSA---SGGLKDGWL 161
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 204/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++ C +E G ++H + + ++D + + L++MYGKC L+ ++F+++
Sbjct: 328 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 387
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R +W+ +I+ +A +G G + + F++M +G P+ F+ + AC+ A V EG
Sbjct: 388 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 447
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK +GI P EHY II G AG L EA +F+ MP +P W +L ++
Sbjct: 448 KYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRM 507
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
G EL + A + L L+P KA+ + KK +
Sbjct: 508 RGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 567
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ + + S D + YEK++ L +++E GY+PDT ++ ++++ AKE+ L
Sbjct: 568 WVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERIL 627
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+YHSER+A+A+ LIS P P+ + KNLRIC DCH A K + K+ R++IVRDN RFHHF
Sbjct: 628 RYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHF 687
Query: 465 RDGKCSCGDYW 475
+G+CSCGDYW
Sbjct: 688 VNGRCSCGDYW 698
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++ A VF S+L + G LK + K +H + + F +V + N LI+MY K
Sbjct: 214 MKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 273
Query: 178 NTRLARKVFDQLRKRNLSSWHL-----MISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+ A +V K + W++ MI GY + L+++ ++R+ G P++ TF
Sbjct: 274 DVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTF 329
Query: 233 LVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ CA +++G L+ +++K D ++ ++ + G G + + + +
Sbjct: 330 SSMIKGCAMQALLEQGAQLHAQVIKTD--LIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 387
Query: 292 PFEPTVEVWEALRNFAQIHG 311
+ + W A+ N HG
Sbjct: 388 EYRTDI-AWNAVINVFAQHG 406
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+SLL SCG + G+ +H L+ + A L N LI MY C + A ++F +
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
+RN SW ++SG + N AD L F MR+ G P +
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTR 122
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
F ++ + + L +MY KC A +VFDQ+ +++ +W MI GYA NG ++ F
Sbjct: 152 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 211
Query: 218 EQMRKTG-PHPDKETFLVVFAACASAEAVKEGFL 250
M++ G D+ F V +A + +K+G+L
Sbjct: 212 RDMKREGLVGADQHVFCSVLSA---SGGLKDGWL 242
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 205/372 (55%), Gaps = 27/372 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++S+L + L ++ GK+VH + S V L N LI+MY KC N AR++FD +
Sbjct: 267 YASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 326
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEGF 249
+R SW+ M+ GY+ +G + L LF+ MR+ PD T+L V + C+ + G
Sbjct: 327 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 386
Query: 250 -LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ ++ GI P I HY ++ +LG AG + EA +F+++MPF PT +W +L +
Sbjct: 387 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCR 446
Query: 309 IHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSAT 347
+H DVE+ + L +L+P A I D + K+
Sbjct: 447 VHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGR 506
Query: 348 NMLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+ +E V + ++D E K+K L+ + +E GYVPD VL+D+DEE KEK
Sbjct: 507 SWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKV 566
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
L HSE+LA+A+GLI+TP +R+IKNLRIC DCH+ K +S++ R +I+RD RFH+
Sbjct: 567 LLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHN 626
Query: 464 FRDGKCSCGDYW 475
G CSCGDYW
Sbjct: 627 IVGGVCSCGDYW 638
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 18/222 (8%)
Query: 101 NLLSLCKEGKVREAIEYM---GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTS 157
NL +LC G+++EA+ M G++ GYD S+L+ C + ++I G+RVH + +
Sbjct: 36 NLKTLCSSGQLKEALLQMAILGREVKFE-GYD---SILNECVSQRAIREGQRVHTHMIKT 91
Query: 158 AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
++ V L +LI +Y KC AR +FD++ +RN+ SW MIS Y+ G + L LF
Sbjct: 92 CYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLF 151
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI-MKNDYGIVPGIEHYI----AII 272
+M ++ P+ TF + +C + + G I +K +Y E ++ +++
Sbjct: 152 VEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNY------ESHMFVGSSLL 205
Query: 273 KVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ +G + +A +P V + +AQ+ D E
Sbjct: 206 DMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++L SC E G+++H + + + + + L++MY K A VF L
Sbjct: 166 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
+R++ + +ISGYA G + L LF Q++ G + + T+ V A + A+ G
Sbjct: 226 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285
Query: 250 LYFEIMKN-DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
++ ++++ Y V + ++I + G++ A + MP E T W A+
Sbjct: 286 VHSHVLRSGQYSYVVLLN---SLIDMYSKCGNVCYARRIFDSMP-ERTCISWNAMLVGYS 341
Query: 309 IHG 311
HG
Sbjct: 342 KHG 344
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 220/393 (55%), Gaps = 39/393 (9%)
Query: 120 QDASASAGYDVFSSLLDSCGNLK------------SIEMGKRVHELLRTSAFVKDVELNN 167
Q+ ++ + VF ++ S GN + ++++GK +H + V +
Sbjct: 165 QNGLSAEAFSVFGDMVKS-GNFRYNAVIMDXGLSGALQLGKCIHHQVIKMDLEDSVFVGT 223
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
++++Y KC +ARK FD ++ +N+ SW M++GY +G+ + + +F +M ++G P
Sbjct: 224 SIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIRSGVKP 283
Query: 228 DKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF 287
+ TF+ V AAC+ A +KEG +F MK ++ + PGIEHY+ ++ +LG AG+L
Sbjct: 284 NYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCMVDLLGRAGYL-XCYGL 342
Query: 288 VERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA---------IVD---- 334
++ M +P +W +L +IH +VEL + + L +LD S D
Sbjct: 343 IKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCGYYVLLSNIYADAGRW 402
Query: 335 ------KIPLPPRK--KQSATNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREA 382
+I + R K +++E K R+ D + YE + N +++E
Sbjct: 403 DEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHEKIYEYLDKXNVKLQEL 462
Query: 383 GYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAI 442
GY+P+ VLHD+DEE K L+ HSE+LA+A+G++++ P + IIKNLRICGDC+ I
Sbjct: 463 GYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSIIHIIKNLRICGDCNVVI 522
Query: 443 KIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++ K+V RE++VRD+KRFHHF++G CSCGDYW
Sbjct: 523 KLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Query: 77 TGTGHSQNTNDPLRGNAQLESLD----------VNLLSLC-KEGKVREAI----EYMGQD 121
TG + DP GN D ++++ C + + R+A+ E + ++
Sbjct: 15 TGKRDASEVTDPFFGNDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEE 74
Query: 122 ASASAGYD-VF-SSLLDSCGNLKSIEMGKR-----VHELLRTSAFVKDVELNNKLIEMYG 174
+ + D VF S+L C ++G R VH L+ F + V + N L++ Y
Sbjct: 75 SGSVESEDGVFVDSVLLGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYA 134
Query: 175 KCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
K +A KVFD + + + W+ +I+ YA NG A+ +F M K+G
Sbjct: 135 KFGEMGVA-KVFDGMNESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG 183
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 214/394 (54%), Gaps = 28/394 (7%)
Query: 109 GKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G EA++ Y +D+ + FS ++ C L S+E K+ H L F D+ N
Sbjct: 156 GYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVAN 215
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++ Y K AR VFD++ +N+ SW+ +I GY +G+G++ + LFEQM + +
Sbjct: 216 TALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMN 275
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ TFL V +AC+ + + G+ F+ M D I P HY +I+++G G L EA
Sbjct: 276 PNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALA 335
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA--------------- 331
+ PF+PT +W AL +++ + EL A E L ++P K
Sbjct: 336 LIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGN 395
Query: 332 ------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
+V + + + + +E K R + S D + Y+K+ L ++ +
Sbjct: 396 LKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISK 455
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
GYVP+ + +L D+DE+ +E+ YHSE+LAIA+GLISTP PL+I++ RICGDCH A
Sbjct: 456 YGYVPNQKTLLPDVDEQ-EERVRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEA 514
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK+++++ GRE+++RD RFHHF+ G CSC DYW
Sbjct: 515 IKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLAR 183
+ AG F+ ++ + L+ I +G+++H D+ ++ LI+MY KC + AR
Sbjct: 72 SDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDAR 131
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC---A 240
VF+++ ++ W+ +I+GYA +G + L ++ +MR +G D TF ++ C A
Sbjct: 132 FVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLA 191
Query: 241 SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
S E K+ + ++++ +G I A++ G + +A ++M + + W
Sbjct: 192 SVEHAKQA--HAALIRHGFG--SDIVANTALVDFYSKWGRIEDARHVFDKMASKNVIS-W 246
Query: 301 EAL 303
AL
Sbjct: 247 NAL 249
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
+ F D + N+++ M+ KC AR++FD++ +RNL SW+ +ISG G + L
Sbjct: 4 NGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRL 63
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVL 275
F M + TF V+ A A E + G L+ +K GI I A+I +
Sbjct: 64 FLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLK--MGIGDDIFVSCALIDMY 121
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G + +A E MP E T W + +HG
Sbjct: 122 SKCGSIEDARFVFEEMP-EKTTVGWNTIIAGYALHG 156
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 197/373 (52%), Gaps = 31/373 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F S+L + L + G H + F+ + + N LI+MY KC + K+F+++
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD 695
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ SW+ M+SGYA +G G + LF M+++ D +F+ V +AC V+EG
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRK 755
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M + Y I P +EHY ++ +LG AG E F++ MP EP VW AL ++H
Sbjct: 756 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH 815
Query: 311 GDVELEDRAEELLGDLDP------------------------SKAIVDKIPLPPRKKQSA 346
+V+L + A + L L+P +++ ++ + L KK
Sbjct: 816 SNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGL---KKTPG 872
Query: 347 TNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E KN+V +R D + E M L +M + GYVPD VL +++EE KE
Sbjct: 873 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEM 932
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSERLAI + L++TPP ++I+KNLR+C DCH K +SKI R +IVRD RFH
Sbjct: 933 FLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFH 992
Query: 463 HFRDGKCSCGDYW 475
HF DG CSC DYW
Sbjct: 993 HFEDGICSCNDYW 1005
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KR 192
++ +C L ++ G +H L+ F D + N LI+MY KC + A +F++ +
Sbjct: 537 VVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTK 596
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+ +W+++I+ Y NG + + F QMR HP+ TF+ V A A A +EG + F
Sbjct: 597 DEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREG-MAF 655
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
G + ++I + G L +E+ M + TV W A+ + +HG
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH 714
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPL 338
DRA L + S+ +D +
Sbjct: 715 ---GDRAIALFSLMQESQVQIDSVSF 737
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +L +++GK +H + D+ L+ MY KC A F+++ R
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR 494
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W+ +I+GYA G + + +F ++R + +PD T + V ACA + +G
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH 554
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ G A+I + G L AE + F W +
Sbjct: 555 GLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVI 604
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 106 CKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
C+ +++ +G + S+ + ++F + L +IE+ + +H + F V
Sbjct: 212 CEAVDFFRSMQLVGVEPSSVSLLNLFPGIC----KLSNIELCRSIHGYVFRRDFSSAV-- 265
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+N LI++Y KC + +AR+VFDQ+ ++ SW M++GYA NG + L LF++M+
Sbjct: 266 SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 226 HPDKETFLVVFAACASAEAVKEG 248
+K + + F A A +++G
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKG 348
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
+E GK +H D+ + L+ MY KC T A+++F L+ R+L +W +I+
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIV 262
G + L LF++M+ P++ T + + ACA +K G ++ +K D +
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD--MD 462
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN-FAQIHGD 312
+ A++ + G A RM V W +L N +AQI GD
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV-TWNSLINGYAQI-GD 511
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMY 173
A E+ +S Y + LL SC +L + ++H + S F + + LI +Y
Sbjct: 18 ASEFPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLY 73
Query: 174 GKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
LAR VFD + W+ MI Y + Q + L ++ M + G PDK TF
Sbjct: 74 SLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFT 133
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPF 293
V AC A ++EG ++F + G+ + ++ + G L A E ++MP
Sbjct: 134 FVLKACTGALNLQEG-VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP- 191
Query: 294 EPTVEVWEAL-RNFAQIHGDVELED--RAEELLGDLDPSKAIVDKIP 337
+ V W A+ +Q E D R+ +L+G S ++++ P
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFP 238
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 215/396 (54%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA++ + + SA +D F S+ L +L +E G+++H F D
Sbjct: 543 RYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHF 602
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N ++MYGKC A ++ Q R+ SW+ +IS A +GQ F M K G
Sbjct: 603 IINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLG 662
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ +F+ + +AC+ V EG Y+ M + YGI PGIEH + +I +LG +G L+EA
Sbjct: 663 VKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEA 722
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS--------------- 329
E F+ MP P VW +L +I+ +++L +A + L +LDPS
Sbjct: 723 EAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATI 782
Query: 330 ------KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKG-LNGQMR-- 380
+ + ++ +K+ A + ++ K +S + D + E++ G L G M+
Sbjct: 783 GRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIV 842
Query: 381 -EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
EAGYVPDT Y L D DEE KE + HSER+A+A+GLI+ P +RI KNLR+CGDCH
Sbjct: 843 GEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCH 902
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ K +S ++GR++++RD RFHHF +G CSC DYW
Sbjct: 903 SFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 114 AIEYMGQDASASAGYDVFSSLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEM 172
A + M + +++ Y ++L SC + I+ G +H + F D + + LI M
Sbjct: 450 AFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITM 509
Query: 173 YGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
Y KC + + +FDQL + S W+ +I+ A G G + L L +MR G D+ F
Sbjct: 510 YAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNF 569
Query: 233 LVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVE 289
+ A ++EG L+ +K + ++H+I A + + G G L +A +
Sbjct: 570 STALSVAADLAMLEEGQQLHGSTIKLGF----ELDHFIINAAMDMYGKCGELDDALRILP 625
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
+ P + + W L + + HG +A+E D+
Sbjct: 626 Q-PTDRSRLSWNTLISISARHGQFH---KAKETFHDM 658
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
Y F+S L +C + + GK +H + ++ + N LI YGKC A+KVF
Sbjct: 362 YVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQ 421
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK-TGPHPDKETFLVVFAACASAEAVK 246
++ K + +W+ +I G+A N + + + F+ MR+ + D T + + +C +
Sbjct: 422 RMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLT----H 477
Query: 247 EGFLYFEIMKNDYGIVPG--IEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
E + + I + + +V G ++ ++ ++I + G L + +++ F+ T VW A
Sbjct: 478 EDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFK-TSSVWNA 536
Query: 303 L 303
+
Sbjct: 537 I 537
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTS---AFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ SCG L I +G H+LL + V N LI M+G C + A +F+++
Sbjct: 166 VISSCGFLMDIILG---HQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMN 222
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R+ SW+ +IS A N + F MR + T ++ + C S + +K G
Sbjct: 223 ERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG-K 281
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ YG+ I ++ V AG +AE RMP E + W ++
Sbjct: 282 GVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP-ERDLISWNSM 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 3/133 (2%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY K A+ VFD++ +RN +SW+ M+SGY G + ++ F + G P
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 232 FLVVFAAC-ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
+ AC S+ KEGF F G++ + + + S G + A++
Sbjct: 61 IASLVTACNKSSIMAKEGF-QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 291 MPFEPTVEVWEAL 303
MP + V W +L
Sbjct: 120 MP-DRNVVSWTSL 131
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 19/183 (10%)
Query: 130 VFSSLLDSCGNLKSI--EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ +SL+ +C N SI + G + H + DV + + Y A+K+F+
Sbjct: 60 MIASLVTAC-NKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ RN+ SW ++ Y+ NG + + +++MR G ++ +V ++C
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSC-------- 170
Query: 248 GFLYFEIMKND-------YGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
GFL I+ + +G+ + ++I + G G + EA M T+ W
Sbjct: 171 GFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTIS-W 229
Query: 301 EAL 303
++
Sbjct: 230 NSI 232
>gi|413946759|gb|AFW79408.1| hypothetical protein ZEAMMB73_086527 [Zea mays]
Length = 865
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 209/381 (54%), Gaps = 35/381 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
S LL +C L + GK +H LR A+ +D+ + LI+MY K N A ++F++
Sbjct: 485 TMSVLLRACAGLALLAKGKELHCFALRRRAYDRDMVVATALIDMYSKSGNLASATRIFER 544
Query: 189 LRK-RNLSSWHLMISGYAANGQGADGLMLFEQM------RKTGPHPDKETFLVVFAACAS 241
+++ +NL SW+ M++G AA+GQG + + LF+ M G PD TF + AC S
Sbjct: 545 IQEEKNLVSWNAMLTGLAAHGQGREAIALFDDMCSASAGAGAGLKPDSITFTALLTACRS 604
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
E + EG+ YF+ M++ YG+ P +E+Y ++ +L G+L EA +F+ R PF+ +W
Sbjct: 605 MELITEGWDYFDAMESRYGVTPTVENYACMVDLLARCGYLDEATDFINRSPFKSAASLWG 664
Query: 302 ALRNFAQIHGDVELEDRAEELLGDLDP--SKAIVDKIPLPPRK-------------KQSA 346
AL +HG++ L + A L L+P S + + L R+ K A
Sbjct: 665 ALLTGCVVHGNLALAEAAARKLFKLEPYNSANYLQMVSLYEREQMFDEAESLKYAMKARA 724
Query: 347 TNMLEEKNRVSDYRSTDLYRGE-----------YEKMKGLNGQMREAGYVPDTRYVLHDI 395
N + + +S +++ E Y+++ L Q+R+AGYV DT + +++
Sbjct: 725 LNTRPGWSWIQIEQSIHVFQVEGKPPHPDTAEIYQQLVRLVLQIRKAGYVADTSCIAYNV 784
Query: 396 DEEAKEKALQYHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
EE KEK L H+E+LAI YGLI S P+R+IKN R+C DCH K +S + GR++I
Sbjct: 785 PEEDKEKLLLSHTEKLAITYGLIHSDASGTPIRVIKNTRMCSDCHEVAKHISALCGRQII 844
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
+RD RFHHF DGKCSC D W
Sbjct: 845 LRDADRFHHFTDGKCSCNDRW 865
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
+L + G H DV ++MY KC A+KVFD L RN+++W+
Sbjct: 323 ASLGLLAHGMEAHCFFLRHRLEPDVYTGTAFVDMYAKCGRLEYAQKVFDTLELRNITTWN 382
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
+++GY+ GQ L L E+M++ PD T+ + + + + L MK
Sbjct: 383 SLVAGYSNAGQFDHALDLVEEMKRNRLDPDITTWNGLISGYSMNGRSSQAVLLLRQMKA- 441
Query: 259 YGIVPGIEHYIAII 272
G+ P + + ++I
Sbjct: 442 IGLTPNVVSWTSLI 455
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVEL-NNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L +CG + G+ VH + V L L MY + + AR+V +
Sbjct: 180 LHACGRAGAPREGQAVHAHAAKAGHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPP 239
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGP---HPDKETFLVVFAACASAEAVKEGFL 250
++ W+++++ A G D L L E+M ++GP P T+ V + CA +E F
Sbjct: 240 VA-WNVVVACCARLGLVDDALDLAERMARSGPVEASPSLATWNAVLSGCARHGRDREAFG 298
Query: 251 YFEIMKNDYGIVP---GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
M + GI P + + + LG H +EA F R EP V
Sbjct: 299 VVRSML-ERGIPPDSSSMSSLLKSVASLGLLAHGMEAHCFFLRHRLEPDV 347
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 205/369 (55%), Gaps = 28/369 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RK 191
++ +C L +G++ H+ + S D L+N L++MY KC + A +F+ + +
Sbjct: 166 MVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTE 225
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RN SW+++ISGY +G G + L LF +M++ G P+ TF + +AC+ A + EG
Sbjct: 226 RNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKC 285
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F MK + +H+ ++ +LG AG L EA + ++ MP P+ VW AL +IHG
Sbjct: 286 FAEMKR-LSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHG 344
Query: 312 DVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNML 350
++EL A L L+P+ + + KK +A +M+
Sbjct: 345 NMELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMI 404
Query: 351 EEKNRVSDYRSTDL---YRGE-YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + + + D YR E Y+KM+ L +M+ AGYVPD LHD++EE KE+ L Y
Sbjct: 405 EYGKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNY 464
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LA+A+G++ P M +R+ KNLR+C DCH+A K +S I R++IVRD RFHHF+
Sbjct: 465 HSEKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQG 524
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 525 GTCSCKDYW 533
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M Q+ A S+ + G L ++ VH + ++++ + N ++ M+ KC
Sbjct: 49 MQQEEGLLADSIAVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCG 108
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
NT AR VFD + +R++ SW+ M+SGY NGQ + L+LF++MR + P T L++ +
Sbjct: 109 NTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVS 168
Query: 238 ACA 240
ACA
Sbjct: 169 ACA 171
>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
Length = 866
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 210/372 (56%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S LL +C L ++ GK +H A+ +D+ + LI+MY K N A+++F+++
Sbjct: 495 TMSVLLRACAGLALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLASAQRIFERI 554
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ NL S + M++G AA+GQG + + LF M +G PD TF + AC S + V EG+
Sbjct: 555 QENNLVSSNAMLTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGW 614
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M++ YG+ P +E+Y ++ +L G+L EA +F+ + PF+ +W AL +
Sbjct: 615 EYFDTMESRYGVTPTVENYACMVDLLARCGYLDEAMDFINKSPFKSVSSLWGALLTGCTL 674
Query: 310 HGDVELEDRAEELLGDLDP--SKAIVDKIPLPPRKK---QSATNMLEEKNRVSDYR---- 360
HG++ L + A L L+P S + + L ++ ++ + K R D R
Sbjct: 675 HGNLALAEAAARKLFKLEPYNSANYLQMVSLYEHEQMFDEAESLKYAMKARALDTRPGWS 734
Query: 361 ------STDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
S ++ E YE++ L Q+R++GYVPDT +++++ EE KEK L
Sbjct: 735 WIQIEQSIHVFEVEGKPHPDTAEIYEELIRLVFQIRKSGYVPDTSCIVYNVPEEEKEKLL 794
Query: 405 QYHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
H+E+LAI YGLI S R+P+R+IKN R+C DCH K +S + R++I+RD RFH+
Sbjct: 795 LSHTEKLAITYGLIHSDASRVPIRVIKNTRMCNDCHELAKHISALCARQIILRDADRFHY 854
Query: 464 FRDGKCSCGDYW 475
F DGKCSC + W
Sbjct: 855 FTDGKCSCNNCW 866
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 139 GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
+L + G H + DV ++MY KC + A+KVFD L RN+++W+
Sbjct: 333 ASLGLLAHGMEAHGFFLRNQLEPDVYTGTAFVDMYAKCGHLEYAQKVFDTLELRNITTWN 392
Query: 199 LMISGYAANGQGADGLMLFEQMRKTGPHPDKETF 232
+++GYA GQ L L E+M++ PD T+
Sbjct: 393 SLVAGYANAGQFDHALDLVEEMKRNRLDPDVTTW 426
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 11/169 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++SL+ N + + E ++ + DV N LI Y + A + Q+
Sbjct: 390 TWNSLVAGYANAGQFDHALDLVEEMKRNRLDPDVTTWNGLINGYSVNGKSSQAVLLLRQI 449
Query: 190 R----KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
+ N+ SW +ISG NG D F +M+K P T V+ ACA +
Sbjct: 450 KAIGLTPNVVSWTSLISGSCNNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAGLALL 509
Query: 246 KEG--FLYFEIMKN-DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
K+G F + + D +V G A+I + +G+L A+ ER+
Sbjct: 510 KKGKELHCFALRRAYDRDMVVG----TALIDMYSKSGNLASAQRIFERI 554
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 9/196 (4%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVEL-NNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L +CG + G+ VH + V L L MY + + AR+V +
Sbjct: 190 LHACGRAGAPREGQAVHAHAAKAGHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPP 249
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGP---HPDKETFLVVFAACASAEAVKEGFL 250
++ W+++++ A G D L L E+M ++G P T+ V + CA +E F
Sbjct: 250 VA-WNVVVACCARLGLVDDALDLAERMARSGRLELEPSLATWNAVLSGCARNGRDREAFG 308
Query: 251 YFEIMKNDYGIVP---GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
IM D G+ P + + + LG H +EA F R EP V A +
Sbjct: 309 VVRIML-DQGLQPDSSSMSSLLKSVASLGLLAHGMEAHGFFLRNQLEPDVYTGTAFVDMY 367
Query: 308 QIHGDVELEDRAEELL 323
G +E + + L
Sbjct: 368 AKCGHLEYAQKVFDTL 383
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 201/371 (54%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS++D+C + ++ G++ H + + + +++ L+ MY + N A+ VF++
Sbjct: 504 ISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQ 563
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ MISGYA +G + F QM +G D TFL V C V EG
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ 623
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M D+ I P +EHY ++ + AG L E + MPF VW L ++
Sbjct: 624 QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRV 683
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
H +VEL + + L L+P + + + KK++ +
Sbjct: 684 HKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCS 743
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ KN+V + + D + Y+K+K + ++++ GY P+T +VLHDI E+ KE L
Sbjct: 744 WIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAML 803
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLA+A+GLI+TPP PL+I+KNLR+CGDCH +K++S I RE+I+RD RFHHF
Sbjct: 804 VAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHF 863
Query: 465 RDGKCSCGDYW 475
G CSCGD+W
Sbjct: 864 NGGACSCGDFW 874
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-----LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F+S+L + + ++++G+RVH R+S FV N L+ MY KC A+ V
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFV-----CNSLMNMYAKCGLVEDAKSV 258
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + R++ SW+ +++G N + L LF + R T + T+ V CA+ + +
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 246 KEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
L+ ++K+ + + + A+ G L +A V W A+
Sbjct: 319 ALARQLHSCVLKHGFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAII 376
Query: 305 NFAQIHGDVEL 315
+ +GD+ L
Sbjct: 377 SGCIQNGDIPL 387
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 85 TNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSI 144
T D + N + L +N L E+ MG+ ++ +++++ C NLK +
Sbjct: 264 TRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQST-----YATVIKLCANLKQL 318
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISG 203
+ +++H + F + L + Y KC A +F RN+ SW +ISG
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
NG ++LF +MR+ P++ T+ + A S + ++ +++K +Y +P
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPPQIHAQVIKTNYQHIP 435
Query: 264 GI-EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ +A GS + + +E + V W A+ + GD E
Sbjct: 436 SVGTALLASYSKFGSTEDALSIFKMIE----QKDVVAWSAMLSCHAQAGDCE 483
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQL 189
S +L +C ++ +G+++H L + +V L++MY KC + +VF+ +
Sbjct: 102 LSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM 161
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K+N+ +W +++G A ++ + LF +MR G P+ TF V +A AS A+ G
Sbjct: 162 PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 1/147 (0%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ Y K +T A +F + ++++ +W M+S +A G LF +M G
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T V ACA A + F + Y I A++ + G++ A
Sbjct: 497 IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ER V + +AQ HG
Sbjct: 557 QIVFERQTDRDLVSWNSMISGYAQ-HG 582
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 201/371 (54%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKS-IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS++D+C + ++ G++ H + + + +++ L+ MY + N A+ VF++
Sbjct: 504 ISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQ 563
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L SW+ MISGYA +G + F QM +G D TFL V C V EG
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ 623
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF+ M D+ I P +EHY ++ + AG L E + MPF VW L ++
Sbjct: 624 QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRV 683
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
H +VEL + + L L+P + + + KK++ +
Sbjct: 684 HKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCS 743
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++ KN+V + + D + Y+K+K + ++++ GY P+T +VLHDI E+ KE L
Sbjct: 744 WIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAML 803
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLA+A+GLI+TPP PL+I+KNLR+CGDCH +K++S I RE+I+RD RFHHF
Sbjct: 804 VAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHF 863
Query: 465 RDGKCSCGDYW 475
G CSCGD+W
Sbjct: 864 NGGACSCGDFW 874
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHEL-----LRTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
F+S+L + + ++++G+RVH R+S FV N L+ MY KC A+ V
Sbjct: 204 FASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFV-----CNSLMNMYAKCGLVEDAKSV 258
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
F+ + R++ SW+ +++G N + L LF + R T + T+ V CA+ + +
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 246 KEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
L+ ++K+ + + + A+ G L +A V W A+
Sbjct: 319 ALARQLHSCVLKHGFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAII 376
Query: 305 NFAQIHGDVEL 315
+ +GD+ L
Sbjct: 377 SGCIQNGDIPL 387
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 85 TNDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSI 144
T D + N + L +N L E+ MG+ ++ +++++ C NLK +
Sbjct: 264 TRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQST-----YATVIKLCANLKQL 318
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISG 203
+ +++H + F + L + Y KC A +F RN+ SW +ISG
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
NG ++LF +MR+ P++ T+ + A S + ++ +++K +Y +P
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPPQIHAQVIKTNYQHIP 435
Query: 264 GI-EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ +A GS + + +E + V W A+ + GD E
Sbjct: 436 FVGTALLASYSKFGSTEDALSIFKMIE----QKDVVAWSAMLSCHAQAGDCE 483
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQL 189
S +L +C ++ +G+++H L + +V L++MY KC + +VF+ +
Sbjct: 102 LSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM 161
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
K+N+ +W +++G A ++ + LF +MR G P+ TF V +A AS A+ G
Sbjct: 162 PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 1/147 (0%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ Y K +T A +F + ++++ +W M+S +A G LF +M G
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P++ T V ACA A + F + Y I A++ + G++ A
Sbjct: 497 IKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ER V + +AQ HG
Sbjct: 557 QIVFERQTDRDLVSWNSMISGYAQ-HG 582
>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 664
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 196/368 (53%), Gaps = 24/368 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L +C ++ G R+H + + D + L++MY KC A VF +
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNH 356
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+++ SW MI G+A +G+ + F QM +G PD+ FL V AC ++ V G +
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNF 416
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH- 310
F+ M+ DY I P ++HY+ ++ +LG AG L EA E VE MP P + W AL + H
Sbjct: 417 FDSMRLDYAIEPTLKHYVLVVDLLGRAGKLDEAHELVEYMPINPDLTTWAALYRACKAHK 476
Query: 311 ---GDVELEDRAE---ELLGD---LDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS 361
D+ L++ E EL G LD + A K +++ S ++E++ Y
Sbjct: 477 SNRTDIVLQNLLELDPELRGSYIFLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIE 536
Query: 362 TDLYRGEYE--------------KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
D ++ K++G+ E GY+P + +HDI+EE KE H
Sbjct: 537 LDCQLNKFAADDYTHKQAQEIRLKLEGIISLAIERGYIPGADWSIHDIEEEEKESVTGIH 596
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ GL+ T P +RIIKNLRICGDCH+ +K +SKI R +++RD ++FHHF+DG
Sbjct: 597 SEKLALTLGLLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRGILLRDARQFHHFKDG 656
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 657 SCSCGDYW 664
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 39/67 (58%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A+++F+ + ++N+ SW +I+G++ G + + +M + G P++ T V +AC+
Sbjct: 246 AKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSK 305
Query: 242 AEAVKEG 248
+ A+ G
Sbjct: 306 SGALGSG 312
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 202/367 (55%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
+L +C L ++++G+ V + + + LI MY +C + A++VF+Q++++N
Sbjct: 255 VLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKN 314
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +++ MI G+A +G+ + + LF + K G P TF+ V AC+ + GF F
Sbjct: 315 VITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFH 374
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M DYGI P IEHY ++ +LG G L EA F+ M P + AL + +IHG++
Sbjct: 375 SMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNL 434
Query: 314 ELEDRAEELL-----GDLDPSKAIVDKIPLPPRKKQSA---TNMLEE------------- 352
EL +R + L D + + + K++A TNM EE
Sbjct: 435 ELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEV 494
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
N + ++ DL + Y+K++ LN +R GY P T VLHDI++ KE AL HS
Sbjct: 495 NNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHS 554
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
ERLAI YGLIST P LR++KNLR+C DCH IK++S I R+++VRD RFHHF +G
Sbjct: 555 ERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGV 614
Query: 469 CSCGDYW 475
CSCGDYW
Sbjct: 615 CSCGDYW 621
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S+L +CG +++ G+ VH + + + KLIE+YGKC AR+VFD++ +
Sbjct: 134 TSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPE 193
Query: 192 RNLSS------------------WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFL 233
R++ + W MI G NG+ L +F M++ P++ T +
Sbjct: 194 RDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIV 253
Query: 234 VVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERM 291
V +AC+ A++ G M + H++ A+I + G + EA+ E+M
Sbjct: 254 CVLSACSELGALQLGRWVRSYMDKHR---IELNHFVGGALINMYSRCGDIDEAQRVFEQM 310
Query: 292 PFEPTVEVWEALRNFAQIHG 311
+ + + FA +HG
Sbjct: 311 KEKNVITYNSMIMGFA-LHG 329
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A K+F + N+ + +I G + DG+ L+ QM + PD V AC
Sbjct: 83 ASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGC 142
Query: 242 AEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
A+KEG ++ +++K G+ I +I++ G G +A + MP E V
Sbjct: 143 HLALKEGREVHSQVLK--LGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMP-ERDVVAS 199
Query: 301 EALRNFAQIHG 311
+ N+ HG
Sbjct: 200 TVMINYYFDHG 210
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 206/361 (57%), Gaps = 27/361 (7%)
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
L I +G+++H L TS + V + L++MY KC A + F+++ ++N +W+ +
Sbjct: 132 LGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAV 191
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYG 260
IS YA GQ + + +F+ M G PD TFL V AAC+ +E YF++M+
Sbjct: 192 ISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNS 251
Query: 261 IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAE 320
+ P EHY +I LG AG + ++ ++ MPFE +W ++ + +I+G+ +L A
Sbjct: 252 MSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIYGNQDLATVAA 311
Query: 321 ELLGDLDPSKAI--------------------VDKIPLPPR--KKQSATNMLEEKNRVSD 358
E L + P+ A V KI + R +K+S + +E K ++
Sbjct: 312 ENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKI-MRDRGVRKESGNSWVEIKQKIYM 370
Query: 359 YRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIA 414
+ S D + E+++ L +M + GY PDT LH +D + K ++L+YHSERLAIA
Sbjct: 371 FSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESLKYHSERLAIA 430
Query: 415 YGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDY 474
+ LI+TPP P+ ++KNL C DCH AIK++SKIV R++IVRD++RFHHF+DG CSCGDY
Sbjct: 431 FALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHHFKDGFCSCGDY 490
Query: 475 W 475
W
Sbjct: 491 W 491
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+SLL G L I++G+++H L + + N LI+MY KC A+ +F
Sbjct: 21 FASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALIDMYSKCGMLDAAKTIFANKS 80
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
+ SW +I+G NGQ + L LF MR+ G PD+ T
Sbjct: 81 DKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 210/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS++ +C NL ++ GK++H ++ S F +V + + ++MY KC + R + +F +++
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++NL W+ +ISG+A + + + ++LFE+M++ G HP++ TF + + C V+EG
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F++M+ YG+ P + HY ++ +LG AG L EA E ++ +PF+PT +W +L +++
Sbjct: 386 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
++EL + A E L +L+P A ++ I + KK +
Sbjct: 446 KNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSW 505
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ K++V + + R + L + R+ GY P + LHD++ KE+ L
Sbjct: 506 IDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLM 565
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ +GL+ P P+RI+KNLRIC DCH +K S R +IVRD RFHHF
Sbjct: 566 QHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFS 625
Query: 466 DGKCSCGDYW 475
DG CSCGD+W
Sbjct: 626 DGHCSCGDFW 635
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 30/246 (12%)
Query: 98 LDVNLLSLCKEGKVREAIEYMGQDASASAGYD-----------------VFSSLLDSCGN 140
VN L CK R + ++ S A YD + +L C
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 141 LKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLM 200
++ K H + DV L N LI Y KC LAR+VFD + +R+L SW+ M
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 201 ISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC-ASAEAVKEGFLYFEIMKN-- 257
I Y N ++ L +F +MR G + T V +AC + +A++ L+ +K
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 258 DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELED 317
D + G A++ + G + +A + E M + +V W ++ + G V+ ++
Sbjct: 194 DLNLYVG----TALLDLYAKCGMIKDAVQVFESMQDKSSV-TWSSM-----VAGYVQNKN 243
Query: 318 RAEELL 323
E LL
Sbjct: 244 YEEALL 249
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 132 SSLLDSCG-NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +CG N ++E K++H L + ++ + L+++Y KC + A +VF+ ++
Sbjct: 166 SSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ +W M++GY N + L+L+ + ++ ++ T V AC++ A+ EG
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 250 LYFEIMKNDYG 260
++ I K+ +G
Sbjct: 285 MHAVICKSGFG 295
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 214/396 (54%), Gaps = 28/396 (7%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
++G +EA+E Q G F S+L++C + ++ +G+ +H+ L + +++
Sbjct: 54 QDGYGKEALEIFQRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELI 113
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MY KC AR+VFDQ+ ++ +W +++G A +G + L +M G
Sbjct: 114 VATALVNMYAKCGKLVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEG 173
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+ TFL + AC+ + + E F I D+G P EH+ +I +LG G L EA
Sbjct: 174 IKPNNVTFLSLVFACSHSGYLDEARDCF-IAMADHGFFPLPEHFRCVIDLLGRGGRLEEA 232
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIV----------- 333
+E ++ MPFEP + W + + ++ DV + A E +++P++
Sbjct: 233 QEVIDTMPFEPGLTAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAAL 292
Query: 334 ---DKIPLPPR-------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
D + R KK+ + +E KNR+ ++ + + + YE+++ L ++
Sbjct: 293 ERWDDVKKVRRLMERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLIYEELRKLTLEI 352
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+EAGYVPDT VLH++DEE K+ L +HSERLA+ YGLI+TPP L ++ NLR+C DCH
Sbjct: 353 KEAGYVPDTSLVLHNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCH 412
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
A K +S I RE++VRD RFH F G CSC DYW
Sbjct: 413 TAFKYISTISNREIVVRDANRFHTFATGGCSCKDYW 448
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MYG+C + AR VF+++ ++ +W+ +++ YA +G G + L +F++M++ G
Sbjct: 13 VGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIFQRMQQEG 72
Query: 225 PHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
TF+ V ACAS A+ G ++ ++ N G+ + A++ + G L+E
Sbjct: 73 VKTGSATFISVLEACASTSALALGRVIHQNLVAN--GLDRELIVATALVNMYAKCGKLVE 130
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A E ++M V W A+ + HG +E
Sbjct: 131 AREVFDQMEGMDVV-AWTAIVAGSAQHGHIE 160
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 214/369 (57%), Gaps = 29/369 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C NL +++ GK+VH+ + + + L+N L+ MY +C + A +VF+++R+RN+
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNV 283
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
SW MISG A NG G + + F +M K G P+++T + +AC+ + V EG ++F+
Sbjct: 284 VSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDR 343
Query: 255 MKN-DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M++ ++ I P + HY I+ +LG A L +A ++ M +P +W L ++HG+V
Sbjct: 344 MRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNV 403
Query: 314 ELEDR---------AEELLGD----LDPSKAI-----VDKIPLPPRKKQSATN----MLE 351
EL +R AEE GD L+ ++ V ++ +KK+ TN +E
Sbjct: 404 ELGERVIAHLIEFKAEEA-GDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIE 462
Query: 352 EKNRVSDYRSTDLY--RGE--YEKMKGLNGQMREAGYVPDTRYVLHDID-EEAKEKALQY 406
+ V ++ D+ R E Y+ + +N Q++ AGYV + LH++D EE K AL+Y
Sbjct: 463 LQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLDSEEEKGYALRY 522
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE+LAIA+G++ TPP +R+ KNLR C DCHN K +S + R +IVRD RFHHF+
Sbjct: 523 HSEKLAIAFGILVTPPETTIRVTKNLRTCVDCHNFAKFVSDVYDRVVIVRDRSRFHHFKG 582
Query: 467 GKCSCGDYW 475
G CSC D+W
Sbjct: 583 GSCSCNDFW 591
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G ++H + + F+ D L L+++Y C N+ A KVFD++ +R+ SW+++IS Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLR 191
Query: 207 NGQGADGLMLFEQMRKTGPH---PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP 263
N + D L+LF++M+ PD T L+ ACA+ A+ G + + ++ G+
Sbjct: 192 NKRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFI-DENGLSG 250
Query: 264 GIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ ++ + G + +A E RM E V W A+
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYEVFNRMR-ERNVVSWTAM 289
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 202/370 (54%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S L+SC L+ +E G+ +H V N L+ MY KC A VF +
Sbjct: 358 FTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGIC 417
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ SW+ +I G A +G G L+LF++M + G D+ T + +AC+ + +++
Sbjct: 418 EKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARC 477
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F + +EHY ++ VLG G + EAE MP E VW L + ++H
Sbjct: 478 FFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVH 537
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPRK-----------------KQSATNM 349
+++ +RA + + +++P + ++ + R+ KQ ++
Sbjct: 538 SSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSW 597
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ K ++ S D L YEK+ L ++RE GY+PD ++ LHD++ E E+ L
Sbjct: 598 ITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLS 657
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAIA+GL+ST + I+KNLR+CGDCH AI +M+KIV RE++VRD+ RFHHF+
Sbjct: 658 YHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFK 717
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 718 NGICSCGDYW 727
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 203/373 (54%), Gaps = 32/373 (8%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNK----LIEMYGKCCNTRLARKVFDQLR 190
L + L + E G+ +H + V LN + L++MY KC + A VF L
Sbjct: 261 LSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLG 320
Query: 191 ---KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
R++ +W+ MI+GYA +G+ + L F Q+R G P TF+ V AC+ + V E
Sbjct: 321 GGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDE 380
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F M+ +YGIVP +EHY ++ +LG AG + EA + V+ M +P +W +L
Sbjct: 381 GRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGAC 440
Query: 308 QIHGDVELEDR-AEELLGD----------LDPSKAIVDKIPLPPR----------KKQSA 346
++H ++ L R A+ L+G+ L A K R +K+
Sbjct: 441 RLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPG 500
Query: 347 TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E RV ++ + D Y K++ +N R G+VP T VLHD+D+ AKE+
Sbjct: 501 CSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKER 560
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
AL HSE+LA+A+GLISTPPR ++I+KNLR C DCH +K++S+ GR+++ RD RFH
Sbjct: 561 ALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRFH 620
Query: 463 HFRDGKCSCGDYW 475
HF DG CSCGDYW
Sbjct: 621 HFVDGSCSCGDYW 633
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
++ Y K AR +FD L +++L W+ M+ GY +G+ ++ L LF QM ++G
Sbjct: 192 TAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVE 251
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKND-------------------YGIVPGIEH 267
PD+ + ++ +A A + G + N Y +E
Sbjct: 252 PDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEE 311
Query: 268 YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+A+ + LG G + V W A+ N +HG
Sbjct: 312 AVAVFRDLGGGG--------------DRDVVAWNAMINGYAMHG 341
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 208/396 (52%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G A+EY S DV F S + SC +L ++ G+++H + + K V
Sbjct: 313 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 372
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MY +C + +VF + MIS Y +G G + LF+QM G
Sbjct: 373 VMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGG 432
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P TFL + AC+ + +EG FE+M YG+ P ++HY ++ +LG +G L EA
Sbjct: 433 AEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEA 492
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPP 340
E + MP P +W+ L + + + ++ +R + + +LDP S ++ I
Sbjct: 493 EALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATS 552
Query: 341 RK-----------------KQSATNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQM 379
R+ K+ + +E K + + + D E ++ + ++
Sbjct: 553 RRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI 612
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R+ GY PD VLHD+++E KE +L +HSE+LAIA+ +S P +P+R++KNLR+C DCH
Sbjct: 613 RQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCH 672
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK+MS++ GRE++VRD RFHHF+DG+CSC DYW
Sbjct: 673 LAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
+ LC G++R+A+ + S +FS L +C L+ + +++H TS
Sbjct: 80 FVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL---RQLHAFAATSGAAT 136
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ--GA-------- 211
D N L+ Y + AR++F+++ +RN+ SW+++ GY NG GA
Sbjct: 137 DRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP 196
Query: 212 ---------------------DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ L F MR+ G HPD+ VF CA V G
Sbjct: 197 ERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 254
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+ C L+ + G++VH + S +D+ + + L MY +C + V L
Sbjct: 238 LGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 297
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ S + +I+G NG L F MR G D TF+ ++C+ A+ +G
Sbjct: 298 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 357
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVL 275
++ ++MK G++ + ++ L
Sbjct: 358 IHGQVMK------AGVDKVVPVMTCL 377
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 200/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S + + +++ GK+VH ++ + + + E+ N +I MY KC + A+K F +L
Sbjct: 677 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLEL 736
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+N SW+ MI+ Y+ +G G++ L F+QM + P+ T + V +AC+ V +G
Sbjct: 737 SMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 796
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YFE M +YG+ P EHY+ ++ +L AG L A++F+ MP EP VW L + +
Sbjct: 797 EYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVV 856
Query: 310 HGDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATN 348
H ++E+ + A L +L+P + K+ KK+ +
Sbjct: 857 HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQS 916
Query: 349 MLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E KN + + D L +E K L + E GYV D +L ++ +E K+ +
Sbjct: 917 WIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTI 976
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LAI++GL+S P MP+ ++KNLR+C DCH+ IK +SK+ RE+IVRD RFHHF
Sbjct: 977 FIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHF 1036
Query: 465 RDGKCSCGDYW 475
G CSC DYW
Sbjct: 1037 EGGACSCKDYW 1047
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L +C ++S+E+G+++H L+ F D + N L+ +Y + A +F +
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+R+ +++ +I+G + G G + LF++M+ G PD T + AC+S + G
Sbjct: 334 QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG 391
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 39/265 (14%)
Query: 81 HSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREA----IEYMGQDA----SASAGYD--- 129
HSQ + NA + S+ +++ + K GK+ A I + G+D + AGY
Sbjct: 496 HSQIIKTSFQLNAYVCSVLIDMYA--KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 553
Query: 130 -------VFSSLLD---------------SCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
F +LD +C L++++ G+++H S F D+ N
Sbjct: 554 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 613
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
L+ +Y KC N A F+Q + +W+ ++SG+ +G + L +F +M + G
Sbjct: 614 ALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDS 673
Query: 228 DKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
+ TF A + +K+G ++ I K Y E AII + G + +A++
Sbjct: 674 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYD--SETEVCNAIISMYAKCGSISDAKK 731
Query: 287 FVERMPFEPTVEVWEALRNFAQIHG 311
+ + V W A+ N HG
Sbjct: 732 QFLELSMKNEVS-WNAMINAYSKHG 755
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C L +E+G+++H + ++F + + + LI+MY K A + +
Sbjct: 475 TYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 534
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW MI+GY L F QM G D+ +ACA +A+KEG
Sbjct: 535 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 593
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 25/313 (7%)
Query: 130 VFSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
FS +L++C G + ++ +++H + K + N LI++Y + AR+VFD
Sbjct: 171 TFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDG 230
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L ++ SSW MISG + N + + LF M G P F V +AC E++
Sbjct: 231 LYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL--- 287
Query: 249 FLYFEIMKNDYGIVPGI----EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA 302
EI + +G+V + + Y+ A++ + G LI AE M V
Sbjct: 288 ----EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTL 343
Query: 303 LRNFAQI-HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRS 361
+ +Q +G+ +E L L+P + + + S+ L ++ Y +
Sbjct: 344 INGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC----SSDGTLFSGQQLHAY-T 398
Query: 362 TDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTP 421
T L +K++G + D L+ E E + ++ + +AYGL+
Sbjct: 399 TKLGFASNDKIEG--ALLNLYAKCSDIETALNYFLETEVENVVLWNV--MLVAYGLLD-D 453
Query: 422 PRMPLRIIKNLRI 434
R RI + ++I
Sbjct: 454 LRNSFRIFRQMQI 466
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 100 VNLLSLCKEG-KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
+N LS C G K E + M D + +SL+ +C + ++ G+++H
Sbjct: 344 INGLSQCGYGEKAMELFKRMQLDG-LEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLG 402
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFE 218
F + ++ L+ +Y KC + A F + N+ W++M+ Y + +F
Sbjct: 403 FASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 462
Query: 219 QMRKTGPHPDKETFLVVFAAC 239
QM+ P++ T+ + C
Sbjct: 463 QMQIEEIVPNQYTYPSILKTC 483
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 113 EAIEYMGQDASASAG----YDVFSSLLDSCGNLK-SIEMGKRVHELLRTSAFVKDVELNN 167
E+ + G D+ + G + LL+ C S++ G+++H + F + L+
Sbjct: 48 ESFQENGIDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSE 107
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
KL++ Y + A KVFD++ +R + +W+ MI A+ LF +M P
Sbjct: 108 KLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTP 167
Query: 228 DKETFLVVFAAC 239
++ TF V AC
Sbjct: 168 NEGTFSGVLEAC 179
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 213/395 (53%), Gaps = 28/395 (7%)
Query: 109 GKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ +A++ +M + + S+L + L + G+ +H + + F D L
Sbjct: 237 GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 296
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LIEMY KC A VF ++K+ + W +I G +G L LF +M KTG
Sbjct: 297 TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK 356
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ F+ V AC A V +G YF++M N+Y I P +EHY ++ +L AGHL EA+
Sbjct: 357 PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKN 416
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE--------------LLGDLDPSKAI 332
+E MP P +W +L ++ HG +++ + A + LL ++ + +
Sbjct: 417 TIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGM 476
Query: 333 VDKIP-----LPPR--KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
+K+ + R +K + +E K + ++ D+ + Y KM + +++
Sbjct: 477 WEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKC 536
Query: 382 AGYVPDTRYVLHDID-EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
G+VPDT VL I+ E+ KE L+ HSERLAIA+GLI+ P +P+RI+KNLR+C DCH+
Sbjct: 537 VGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHS 596
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SKI RE+IVRDN RFHHF++G CSC DYW
Sbjct: 597 VTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD------ 187
++ C L ++ GK++H L F DV + L+ MY KC ARKVFD
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180
Query: 188 ------------------------------------QLRKRNLSSWHLMISGYAANGQGA 211
Q+ +L +W+LMI+GY NGQ
Sbjct: 181 VVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 240
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
D + +F M K G P T + V +A + + +G M+ + + GI ++
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG-TSL 299
Query: 272 IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
I++ G IE+ V R + V W A+ IHG
Sbjct: 300 IEMYAKCG-CIESALTVFRAIQKKKVGHWTAIIVGLGIHG 338
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYG--KCCNTRLARKV 185
+++ SL +C + +E ++H +A ++++L+ +Y K + AR +
Sbjct: 16 HNLHLSLFQTCSAPQEVE---QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSI 72
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAV 245
FD++++R+L W+ +I Y N DG++LF ++ PD T V CA V
Sbjct: 73 FDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVV 131
Query: 246 KEG 248
+EG
Sbjct: 132 QEG 134
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 187/355 (52%), Gaps = 26/355 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H + F+ + N L++MY C + A KVF R ++L W MI+ Y
Sbjct: 433 GKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGM 492
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
+G+G + LF M PD TFL + AC+ + + EG E MK Y + P E
Sbjct: 493 HGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPE 552
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
HY ++ +LG A HL EA FV+ M EPT EVW A +IH + +L + A + L DL
Sbjct: 553 HYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDL 612
Query: 327 DP----SKAIVDKIPLPP-----------------RKKQSATNMLEEKNRVSDYRSTDLY 365
DP S ++ + KK + +E N+V + D
Sbjct: 613 DPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKS 672
Query: 366 RGE----YEKMKGLNGQM-REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIST 420
E Y+K+ + ++ +E GYVP T+ VLH++ +E K + L HSERLAIAYGL+ST
Sbjct: 673 HPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMST 732
Query: 421 PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+RI KNLR+C DCH K++SK RELIVRD RFHHF DG CSCGD+W
Sbjct: 733 SEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +CG ++ I G +H L+ + V + N L+ MY KC + ARK+FD++
Sbjct: 13 FPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMN 72
Query: 191 KRN-LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RN + SW+ +IS Y+ NGQ + L LF +M+K G + T + AC + K G
Sbjct: 73 ERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGM 132
Query: 250 -LYFEIMKND 258
++ I+K++
Sbjct: 133 EIHAAILKSN 142
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G EA+++ QDA+ S+L + G L + GK +H + ++
Sbjct: 190 QNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLR 249
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI+MY KCC A VFD++ ++L SW +I+ YA N + L L +++ G
Sbjct: 250 IGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKG 309
Query: 225 PHPDKETFLVVFAACA 240
D AC+
Sbjct: 310 MDVDTMMIGSTLLACS 325
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKS 143
ND + N+ + + +N G+ EA+ + A G + ++ + L +C +
Sbjct: 75 NDVVSWNSIISAYSLN-------GQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127
Query: 144 IEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISG 203
++G +H + S V DV + N L+ M+ + A ++FD+L +++ +W+ MI+G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187
Query: 204 YAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
+ NG + L F ++ PD+ + + + AA
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAA 222
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 204/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C +L ++ GK +H ++ D L LI+MY KC + A +VF ++ ++
Sbjct: 207 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 266
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
+S W MISGYA +G+G + L F +M+ G P++ TF + AC+ A V E L F
Sbjct: 267 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 326
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
E M+ +G P IEHY ++ +LG AG L EAEE +E MP +P +W AL N IHG+
Sbjct: 327 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 386
Query: 313 VELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNMLE 351
+EL + ++L +DP + ++ K +++
Sbjct: 387 LELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVIS 446
Query: 352 EKNRVSDYRSTDLYRGEYEKMKGLNGQ----MREAGYVPDTRYVLHDIDEEAKEKALQYH 407
++ + D + +++ + Q +RE GY P +L D++++ KE A+ +H
Sbjct: 447 VNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHH 506
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ +GLIST P M +RI+KNLR+C DCH IK++SK+ RE+++RD RFH F+DG
Sbjct: 507 SEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDG 566
Query: 468 KCSCGDYW 475
C+CGDYW
Sbjct: 567 NCTCGDYW 574
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F LL +C ++ ++E +++H + F ++ N L+ +Y K + + AR +FDQ+
Sbjct: 120 TFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
+R+ + L LF +M+ G D + ACA + +G
Sbjct: 180 DQRD-----------------TEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 222
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+++ I K++ I P + +I + G L EA E +M E V VW A+ +
Sbjct: 223 WIHAYIKKHEIEIDPILG--CVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYA 279
Query: 309 IHG 311
IHG
Sbjct: 280 IHG 282
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA--RKVFDQLRK 191
LL C N++ + +++H + + + D +KL+ + LA R VFD++ +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEG-F 249
N W+ MI GY+ + + + L+L+ M + PH + TF + AC+S A++E
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSALEETQQ 139
Query: 250 LYFEIMKNDYG 260
++ I+K +G
Sbjct: 140 IHAHIIKMGFG 150
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 209/374 (55%), Gaps = 36/374 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-----LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
S+ +C L S+ +G+ H LL +AF+ +I+MY K + + KVF+
Sbjct: 600 SVFGACSLLPSLRLGREAHGYALKCLLEDNAFIA-----CSVIDMYAKNGSVMESFKVFN 654
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
L++R+++SW+ M+ GY +G+ + + LFE+M++TG PD+ TFL V AC + V E
Sbjct: 655 GLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHE 714
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEF-VERMPFEPTVEVWEALRNF 306
G Y + MK +G+ P ++HY +I +L AG L EA + E M EP V +W L +
Sbjct: 715 GLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSS 774
Query: 307 AQIHGDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQS 345
+IH ++E+ ++ L G D + + ++ +K +
Sbjct: 775 CRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDA 834
Query: 346 ATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----QMREAGYVPDTRYVLHDIDEEAKE 401
+ +E +V + + + +E++K L ++ + GY PDT V HD+ EE K
Sbjct: 835 GCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKT 894
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+ L+ HSE+LAI YGLI T LR+ KNLRIC DCHNA K++SK++ RE++VRDNKRF
Sbjct: 895 EQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRF 954
Query: 462 HHFRDGKCSCGDYW 475
HHF++G CSCGDYW
Sbjct: 955 HHFKNGFCSCGDYW 968
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 139 GNLKSIEMGKRVHELLRTSA-FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
G K I++G+++H+L+ SA D L ++I MY C + +R VFD LRK+NL W
Sbjct: 92 GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151
Query: 198 HLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMK 256
+ +IS Y+ N + L +F +M ++G PD TF V ACA V+ G ++
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211
Query: 257 NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELE 316
+V + A++ G+ G + +A + MP E + W ++ ++ D L
Sbjct: 212 KTR-LVEDVFVSNALVSFYGTNGSVSDALRVFKIMP-ERNLVSWNSM---IRVFSDNGLS 266
Query: 317 DRAEELLGDLDPSKAIVDKIPLPPRKKQSAT 347
+ LLG + D+I P AT
Sbjct: 267 EECFLLLGQMMEKD---DEIAFTPDVATLAT 294
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 129 DVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
D+F+ SLL +C +KS+++GK VH L+ + +D + L+ +Y C A +F
Sbjct: 493 DLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLF 552
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + + L SW+ M++GY NG L LF QM G P + + + VF AC+ +++
Sbjct: 553 DAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLR 612
Query: 247 -----EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
G+ +++++ I ++I + G ++E+ + + E +V W
Sbjct: 613 LGREAHGYALKCLLEDNAFIA------CSVIDMYAKNGSVMESFKVFNGLK-ERSVASWN 665
Query: 302 ALRNFAQIHG 311
A+ IHG
Sbjct: 666 AMVMGYGIHG 675
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F ++ +C + +++G VH L+ + V+DV ++N L+ YG + A +VF +
Sbjct: 187 FPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMP 246
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH----PDKETFLVVFAACASAEAVK 246
+RNL SW+ MI ++ NG + +L QM + PD T V CA +
Sbjct: 247 ERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIG 306
Query: 247 EG 248
G
Sbjct: 307 VG 308
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+++L C + I +GK VH L + K+V +NN L++MY KC A+ +F
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNN 351
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAAC 239
+N+ SW+ M+ G++A G L QM G D+ T L C
Sbjct: 352 NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC 402
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 148 KRVHELLRTSAFVKDVEL-NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
K +H FV + EL N + Y KC + A +VF +R + ++SW+ +I GY+
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV--PG 264
+ L + QM+ +G PD T + +AC+ +++K G K +G++
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLG-------KEVHGLIIRNR 524
Query: 265 IEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+E YI+++ + G L A + M + T+ W + N
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAME-DKTLVSWNTMVN 568
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 196/373 (52%), Gaps = 64/373 (17%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +S+L +C L +E GK+VH + +NN L+ MY KC A +F +
Sbjct: 517 IVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSM 576
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ +W +I GYA NG+G D L F+QM
Sbjct: 577 HVRDVITWTALIVGYARNGKGRDSLKYFQQM----------------------------- 607
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
K YGI PG EHY +I + G G L EA+E + +M +P VW+AL ++
Sbjct: 608 ------KKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRV 661
Query: 310 HGDVELEDRAEELLGDLDPSKAI----VDKIPLPPRK-----------------KQSATN 348
HG++EL +RA L +L+P A+ + + L RK K+ +
Sbjct: 662 HGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCS 721
Query: 349 MLEEKNRVSDYRSTDLYRGE------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+E +R+ + S D RG Y K+ + +++E GYVPD + LHD+D E KE
Sbjct: 722 WIEMNSRLHTFISED--RGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEA 779
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L YHSE+LA+A+GL+++PP P+RI KNLR+CGDCH+A+K +S + R +I+RD+ FH
Sbjct: 780 GLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFH 839
Query: 463 HFRDGKCSCGDYW 475
HF++G+CSC DYW
Sbjct: 840 HFKEGECSCEDYW 852
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 13/240 (5%)
Query: 106 CKEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
C+ G+ EA + M + + Y S+L C L I+ G+ +H + + F +
Sbjct: 188 CRFGRQAEAFDLFKRMRLEGQKPSQY-TLGSILRGCSALGLIQKGEMIHGYVVKNGFESN 246
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
V + L++MY KC + A +F L K N W M++GYA NG + F M
Sbjct: 247 VYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYM 306
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
G ++ TF + AC+S A G ++ I++N +G ++ A++ + G
Sbjct: 307 HTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQS--ALVDMYAKCG 364
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP 339
L A+ +E M + V W ++ HG E+ A L + +D P
Sbjct: 365 DLGSAKRVLENMEDDDVVS-WNSMIVGCVRHG---FEEEAILLFKKMHARNMKIDHYTFP 420
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 130 VFSSLLDSC--GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
F S+L+ C G + GK VH L+ + F ++N L++MY K + A VF+
Sbjct: 418 TFPSVLNCCIVGRID----GKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFE 473
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++ ++++ SW +++GY NG + L F MR +G PD+ + +ACA ++
Sbjct: 474 KMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEF 533
Query: 248 GFLYFEIMKNDY---GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL- 303
G + + +D+ G+ + +++ + G L +A+ M + W AL
Sbjct: 534 G----KQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVI-TWTALI 588
Query: 304 ----RN---------FAQIHGDVELEDRAEEL---------LGDLDPSKAIVDKIPLPP 340
RN F Q+ +E E LG LD +K I++++ + P
Sbjct: 589 VGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKP 647
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 25/238 (10%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKL 169
K E YM + S + F S+L +C ++ + G++VH + + F + + + L
Sbjct: 298 KAIEFFRYMHTEGVESNQF-TFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSAL 356
Query: 170 IEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDK 229
++MY KC + A++V + + ++ SW+ MI G +G + ++LF++M D
Sbjct: 357 VDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDH 416
Query: 230 ETFLVVFAACASAE---------AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
TF V C +K GF ++++ N A++ +
Sbjct: 417 YTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLVSN------------ALVDMYAKTED 464
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE--LEDRAEELLGDLDPSKAIVDKI 336
L A E+M FE V W +L +G E L+ + + + P + IV I
Sbjct: 465 LNCAYAVFEKM-FEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASI 521
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y AR++F+ R+ +W +ISGY G+ A+ LF++MR G
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQK 209
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P + T + C++ +++G ++ ++KN G + ++ + H+ EAE
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKN--GFESNVYVVAGLVDMYAKCRHISEAE 267
Query: 286 EFVERMPFEPTVEV-WEALRNFAQIHGD 312
+ + F V W A+ +GD
Sbjct: 268 ILFKGLAFNKGNHVLWTAMVTGYAQNGD 295
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 223/420 (53%), Gaps = 50/420 (11%)
Query: 92 NAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVH 151
NA + + N L+ G+ E M Q A + F + L +C ++++G++V
Sbjct: 175 NAMISGYEQNGLA----GRAIEVYREM-QMAGEAPDSATFVATLSACAQAGALDLGRQVD 229
Query: 152 ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGA 211
+L+ + +V L L+ MY +C AR+ F+ L++RN+ +W MI+GY +G G
Sbjct: 230 KLIVSERMEMNVVLGAALVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGG 289
Query: 212 DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAI 271
+ + LF MR+ GP P+ TF+ V +ACA A V EG F MK+ YG+VP +EHY ++
Sbjct: 290 EAVKLFNLMRQQGPPPNDVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSM 349
Query: 272 IKVLGSAGHLIEAEEFV-ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK 330
+ + G AG L +A F+ + +P EP EVW A+ ++H D L E L L+P
Sbjct: 350 VDMYGRAGLLDDAMRFIHDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPES 409
Query: 331 AIVDKIPLPPRKKQSATNMLE---EKNRVSDYRSTDLYR--------------------- 366
P + +N+ + N V R T + R
Sbjct: 410 ---------PSHRVLLSNLYALSGKMNHVEKVRDTMIKRRLKKPIGYSLIEIAGVAHLFR 460
Query: 367 -GE---------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG 416
GE Y+ ++ L ++ + GYVP T VLH+++EE +E AL+YH E+LA+A+G
Sbjct: 461 MGEKSHPKTSEIYQYLEKLIEKITDVGYVPKTDSVLHELEEEEREFALRYHGEKLAVAFG 520
Query: 417 LISTPP-RMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
L+ T P+RIIKNLRIC DCH AIK MS + RE+IVRD RFHHF+ GKCSC +YW
Sbjct: 521 LMMTSGCTTPIRIIKNLRICEDCHLAIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 580
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S+ +C +L +I G +H + + L+ +Y KC +ARK+FD +R
Sbjct: 108 FTSVAKACADLSAIRAGMGIHAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIR 167
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ +W+ MISGY NG + ++ +M+ G PD TF+ +ACA A A+ G
Sbjct: 168 DKSVVAWNAMISGYEQNGLAGRAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLG 225
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 211/396 (53%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ GK EA + + + DV + SL+ +C +L +++ GK H + +
Sbjct: 413 QNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETS 472
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI+MY KC L+R++FD + R++ SW+ MI+GY +G G + LF M+
Sbjct: 473 ICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQA 532
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD TF+ + +AC+ + V EG +F +M + YGI P +EHYI ++ +L G L EA
Sbjct: 533 CEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEA 592
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-----IVDKIPLP 339
+F++ MP + V VW AL ++H +++L + ++ L P + +
Sbjct: 593 YQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAA 652
Query: 340 PR----------------KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQM 379
R KK + +E + + D + Y+++ + +
Sbjct: 653 GRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDI 712
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
+ GY DT +VL D++EE KEKAL YHSE+LAIA+G+++ + + KNLR+CGDCH
Sbjct: 713 NKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCH 772
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK M+ + R +IVRD RFHHF++G+CSCGD+W
Sbjct: 773 TVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S L +C NL + +GK++H LL S D+ N L+ MY K A +FDQ+
Sbjct: 339 ASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVV 398
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++ S+ ++SGY NG+ + +F +M+ PD T + + AC+ A++ G
Sbjct: 399 KDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHG--- 455
Query: 252 FEIMKNDYG--IVPGI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
K +G IV GI E I A+I + G + + + + MP V W +
Sbjct: 456 ----KCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVS-WNTMIA 510
Query: 306 FAQIHG 311
IHG
Sbjct: 511 GYGIHG 516
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L + + VH + D+ ++ L+++Y KC + R A VF ++
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP 191
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-- 248
R++ +W+ M++GYA +G+ +D + M+ P+ T + + A A+ +G
Sbjct: 192 ARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRA 250
Query: 249 ---FLYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +D+ G++ G A++ + GHL+ A E M V W AL
Sbjct: 251 VHAYSVRACSLHDHKDGVLVG----TALLDMYAKCGHLVYASRVFEAMAVRNEV-TWSAL 305
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 143 SIEMGKRVHELLRTSAFVKD----VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWH 198
++ G+ VH + + D V + L++MY KC + A +VF+ + RN +W
Sbjct: 244 ALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWS 303
Query: 199 LMISGYAANGQGADGLMLFEQMRKTG 224
++ G+ G+ + LF+ M G
Sbjct: 304 ALVGGFVLCGRMLEAFSLFKDMLAQG 329
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 207/368 (56%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C ++ ++ +H + S F + + +NN LI+MY KC N AR+VF+ + ++
Sbjct: 359 SVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK 418
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ +A +G + LF +M++ P+ TF+ V AC A V+EG F
Sbjct: 419 NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLF 478
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M N++GI P EHY ++ + A L +A E +E MPF P V +W +L + Q+HG+
Sbjct: 479 SSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGE 538
Query: 313 VELEDRAEELLGDLDP----SKAIVDKIPLPPRK-----------------KQSATNMLE 351
EL + A + L +L+P + ++ I ++ K+ A++ +E
Sbjct: 539 AELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIE 598
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N+V + D Y + YEK+ + +++ GY P T +L D++EE K++ + +H
Sbjct: 599 INNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWH 658
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ YGLIS +RI+KNLRIC DCH+ +K++SK+ E++VRD RFHH G
Sbjct: 659 SEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGG 718
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 719 ICSCRDYW 726
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 106 CKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
C+ G +A+ S+ D + ++L +CG+ ++ G+ +HE ++ + + D
Sbjct: 198 CQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDS 257
Query: 164 ELNNKLIEMYGKCCNTRLARKVF-------------------------------DQLRKR 192
L LI MY C LARK++ DQ+ +R
Sbjct: 258 HLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIER 317
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLY 251
+L W MISGYA + Q + L LF++M + PD+ T L V +AC+ A+ + +++
Sbjct: 318 DLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIH 377
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ ++ +G + + A+I + G+L++A E E MP + + W ++ N +HG
Sbjct: 378 TYVDRSGFGRALSVNN--ALIDMYAKCGNLVKAREVFENMPRKNVIS-WSSMINAFAMHG 434
Query: 312 DVE 314
+ +
Sbjct: 435 NAD 437
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F SLL + + + G +H L FV D + LI MY C AR +FD++
Sbjct: 124 FPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMC 183
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ +W+++I GY NG D L LFE MR + PD V +AC A + G
Sbjct: 184 HPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRT 243
Query: 251 YFEIMK-NDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
E +K N Y I ++ A+I + + G + A + + + + + L +A++
Sbjct: 244 IHEFVKDNGYAIDSHLQ--TALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKL 301
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 203/356 (57%), Gaps = 25/356 (7%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
E GK +H + + + + L+ +Y +C N L +VF+++ KR++ SW+ +IS Y
Sbjct: 303 EQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSY 362
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
+G G + +F++M G P +F+ V AC+ A V+EG + FE M + I P
Sbjct: 363 GIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPS 422
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLG 324
+EHY ++ +LG A L EA + ++ M EP +VW +L +IH +VEL +RA L
Sbjct: 423 VEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLF 482
Query: 325 DLDPSKA-----IVD--------------KIPLPPR--KKQSATNMLEEKNRVSDYRSTD 363
+L+P+ A + D K+ L R +K + +E + ++ + S D
Sbjct: 483 ELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVD 542
Query: 364 LYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIS 419
+ + E++ L+ +M+E GYVPDT+ VL+D+D E KE+ + HSE+LA+A+GLI+
Sbjct: 543 EFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLIN 602
Query: 420 TPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ +RI KNLR+C DCH+ K +SK RE++VRD RFH F+DG CSCGDYW
Sbjct: 603 SKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 48 YATPNPKVYRNTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCK 107
+A P+ + K P++ +P+ +T R N + + + SLCK
Sbjct: 2 WAFQTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTT--RSNGDSNNNNPLIQSLCK 59
Query: 108 EGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNN 167
+G + +A++ + Q+ + + + L+ SC S+ G +H L +D L
Sbjct: 60 QGNLNQALQVLSQEPNPTQ--HTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLAT 117
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHP 227
KLI MY + + ARKVFD+ RKR + W+ + G G + L L+ +M + G
Sbjct: 118 KLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPS 177
Query: 228 DKETFLVVFAACASAEAVKEGFL-----YFEIMKNDYGIVPGIEHYIAIIKVL----GSA 278
D+ T+ V AC ++EA L + I+++ G E ++ I+ L
Sbjct: 178 DRFTYTYVLKACVASEAFVSLLLNGREIHGHILRH------GFEGHVHIMTTLLDMYARF 231
Query: 279 GHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ A ++MP + V W A+
Sbjct: 232 GCVLNASRVFDQMPVKNVVS-WSAM 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ +H + F V + L++MY + A +VFDQ+ +N+ SW MI+ Y+
Sbjct: 202 GREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSK 261
Query: 207 NGQGADGLMLFEQMRKTGPH--PDKETFLVVFAACASAEAVKEGFLY--FEIMKNDYGIV 262
NG+ + L LF +M P+ T + V ACA+ A+++G L + + + I+
Sbjct: 262 NGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSIL 321
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
P + A++ V G+L ERM V W +L + IHG
Sbjct: 322 PVVS---ALVTVYARCGNLELGHRVFERMEKRDVVS-WNSLISSYGIHG 366
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 208/396 (52%), Gaps = 27/396 (6%)
Query: 107 KEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
+ G A+EY S DV F S + SC +L ++ G+++H + + K V
Sbjct: 251 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 310
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ L+ MY +C + +VF + MIS Y +G G + LF+QM G
Sbjct: 311 VMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGG 370
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P TFL + AC+ + +EG FE+M YG+ P ++HY ++ +LG +G L EA
Sbjct: 371 AEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEA 430
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP----SKAIVDKIPLPP 340
E + MP P +W+ L + + + ++ +R + + +LDP S ++ I
Sbjct: 431 EALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATS 490
Query: 341 RK-----------------KQSATNMLEEKNRVSDYRSTDLYRGEY----EKMKGLNGQM 379
R+ K+ + +E K + + + D E ++ + ++
Sbjct: 491 RRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKI 550
Query: 380 REAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCH 439
R+ GY PD VLHD+++E KE +L +HSE+LAIA+ +S P +P+R++KNLR+C DCH
Sbjct: 551 RQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCH 610
Query: 440 NAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK+MS++ GRE++VRD RFHHF+DG+CSC DYW
Sbjct: 611 LAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 102 LLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
+ LC G++R+A+ + S +FS L +C L+ + +++H TS
Sbjct: 18 FVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL---RQLHAFAATSGAAT 74
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQ--GA-------- 211
D N L+ Y + AR++F+++ +RN+ SW+++ GY NG GA
Sbjct: 75 DRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP 134
Query: 212 ---------------------DGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ L F MR+ G HPD+ VF CA V G
Sbjct: 135 ERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 192
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+ C L+ + G++VH + S +D+ + + L MY +C + V L
Sbjct: 176 LGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
++ S + +I+G NG L F MR G D TF+ ++C+ A+ +G
Sbjct: 236 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 295
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVL 275
++ ++MK G++ + ++ L
Sbjct: 296 IHGQVMK------AGVDKVVPVMTCL 315
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 199/371 (53%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ L C +L S+E G+++H ++ S V D+ + + L++MY KC A +F+ L
Sbjct: 619 TLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R+ +W+ +I GYA NGQG L F M G PD TF + +AC+ V+EG
Sbjct: 679 IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGK 738
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M D+GI P ++H ++ +LG G E E+F+++M +WE + +++
Sbjct: 739 EHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKM 798
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
H ++ L ++A L +L P K + + KK+ +
Sbjct: 799 HNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCS 858
Query: 349 MLEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E +V + S D + + K+ L+ ++ YVP T YVLH++ E K++ L
Sbjct: 859 WVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENL 918
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
++HSERLA+ + LIST +RI KNLRIC DCH+ +K +S I +E++VRD +RFHHF
Sbjct: 919 RFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHF 978
Query: 465 RDGKCSCGDYW 475
++G CSC D+W
Sbjct: 979 KNGACSCNDFW 989
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L SC L + G++VH + + + + LI+MY KC A F++L
Sbjct: 518 TFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+L +W ++I+ YA QG L F QM++ G P++ T + C+S ++ EG
Sbjct: 578 SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGG 636
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
M G V + A++ + G + EAE E + T+ + +AQ
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQ 695
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L C + +S+ + K +H L+ D L L+ +Y KC + AR V ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R++ SW +I G A G D + LF++M+ G P++ T AC+ A+ G
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
++ + K G++ + A++ + G + A + MP + V W L N
Sbjct: 235 MHAQAFK--LGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV-TWNVLLNGYAQ 291
Query: 310 HGDV 313
GDV
Sbjct: 292 RGDV 295
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L +C ++++GK++H + D+ + + L+++Y KC LA K+F + ++N
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFE 253
+W+++++GYA G L LF M + ++ T V CA+++ +K+G ++
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339
Query: 254 IMKNDYGIVPGIEHY-IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
I+K Y G E ++ + G I+A + + +P + VW AL G
Sbjct: 340 IIKCGY---EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQ 395
Query: 313 VELEDRAEEL--LGDLDPSKAIV 333
E + L LGD P++ +
Sbjct: 396 SEESIKLFHLMRLGDTLPNQYTI 418
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL + N +++ G+ +H + F DV ++N L+ MY K K+++ + R
Sbjct: 420 SLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR 479
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LY 251
+L SW+ +SG G L +F M + G P+ TF+ + +C+ V G ++
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 252 FEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
I+KN D V A+I + +L +A+ R+ + N+AQ
Sbjct: 540 AHIIKNQLDDNNFVC-----TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+++L C N K+++ G+ +H L+ + + + L++MY KC A VF +
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+K ++ W +I+ GQ + + LF MR P++ T + +A + ++ G
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYG 434
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/354 (37%), Positives = 195/354 (55%), Gaps = 26/354 (7%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
GK +H F + ++ L++MY K + +AR +F+ L ++ + SW+ MI+GYA
Sbjct: 222 GKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAM 281
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIE 266
+G + L LF++M K PD TF+ V AAC+ + EG ++F M +D+ I P ++
Sbjct: 282 HGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQ 340
Query: 267 HYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDL 326
HY +I +LG G L EA + + M EP VW AL + +IHG+VE+ + A E L +L
Sbjct: 341 HYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVEL 400
Query: 327 DPSKA---------------------IVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLY 365
+P + D + KK A + +E N+V + S D
Sbjct: 401 EPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTS 460
Query: 366 RGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTP 421
+ Y ++K M+EAGY P V HD++++ K + HSERLAIA+GLIST
Sbjct: 461 HPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTS 520
Query: 422 PRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
L IIKNLRIC DCH AIK +SKI RE+ +RD R+HHF+DG CSCGD+W
Sbjct: 521 AGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++SLL SC K+IE GK++H + + L KL+ +Y C + A +FD++
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
KRNL W++MI GYA NG + L+ QMR G PDK TF V AC++ A++EG
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L +C L ++E GK++H+ + S DV + LI+MY KC AR+VFD++
Sbjct: 105 FPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKID 164
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ W+ M++ Y+ NGQ + L L M G P + TF++ AA A + +G
Sbjct: 165 ERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQG-- 222
Query: 251 YFEIMKNDYGIVPGIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
E+ + Y G E A++ + +G + A E + E V W A+
Sbjct: 223 -KEL--HGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLE-EKRVVSWNAMITG 278
Query: 307 AQIHGDV-ELEDRAEELLGDLDP 328
+HG E D +E+ G + P
Sbjct: 279 YAMHGHANEALDLFKEMKGKVLP 301
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 205/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ LL +CG+L ++E+G+ +H + + + ++ + N LI+MY KC + AR +FD +
Sbjct: 857 TMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMI 916
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++L +W +MISG +G G + + F++MR G PD+ TF + AC+ + + EG+
Sbjct: 917 PEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGW 976
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F M ++ + P +EHY ++ +L G+L +A +E MP +P +W AL +I
Sbjct: 977 GFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRI 1036
Query: 310 HGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATN 348
H DVEL ++ E + +L+P A + ++I KK +
Sbjct: 1037 HHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCS 1096
Query: 349 MLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+E + + + + S D + + + L +M+ G+ P RY L + + KE AL
Sbjct: 1097 WIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVAL 1156
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+A+G+++ P +R+ KNLR+C DCH K MSK RE+I+RD+ RFHHF
Sbjct: 1157 CGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHF 1216
Query: 465 RDGKCSCGDYW 475
+DG CSC D+W
Sbjct: 1217 KDGFCSCRDFW 1227
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 84 NTNDPLR-----GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLD 136
N ND ++ G + S + + +EG +AI + S DV+S S+L
Sbjct: 704 NLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLH 763
Query: 137 SCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS 196
+C S++ G+ VH +R + + ++N L++MY KC + A VF Q+ +++ S
Sbjct: 764 ACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVS 823
Query: 197 WHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIM 255
W+ MI GY+ N + L LF +M+K PD T + AC S A++ G ++ I+
Sbjct: 824 WNTMIGGYSKNSLPNEALKLFAEMQKE-SRPDGITMACLLPACGSLAALEIGRGIHGCIL 882
Query: 256 KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+N Y + + A+I + G L+ A + +P E + W + + +HG
Sbjct: 883 RNGYSSELHVAN--ALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMHG 935
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSLLDS---CGNLKSIEMGKRVHELLRTSAFVKDVEL 165
G A+E+ Q G D+ ++L++S C N+ S+ +G+ +H + F ++V
Sbjct: 633 GFSHSALEFFVQMLILRVGVDL-ATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
NN L++MY KC N A + F+++ ++ + SW +I+ Y G D + LF +M G
Sbjct: 692 NNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV 751
Query: 226 HPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
PD + V ACA ++ +G ++ I KN+ + + + A++ + G + EA
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN--ALMDMYAKCGSMEEA 809
Query: 285 EEFVERMPFEPTVEVW--------------EALRNFAQIH 310
++P + V W EAL+ FA++
Sbjct: 810 YLVFSQIPVKDIVS-WNTMIGGYSKNSLPNEALKLFAEMQ 848
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 99 DVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSA 158
+ + C+ G +R A+E + + + +SS+L C K ++ GK VH ++ ++
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNG 481
Query: 159 FVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN-LSSWHLMISGYAANGQGADGLMLF 217
+ L KL+ MY C R R++FD + N + W+LM+S YA G + + LF
Sbjct: 482 IPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLF 541
Query: 218 EQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++M+K G + TF + A+ V E
Sbjct: 542 KKMQKLGITGNSYTFSCILKCFATLGRVGE 571
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 84/210 (40%), Gaps = 26/210 (12%)
Query: 107 KEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G RE+I Q + FS +L L + KR+H + F
Sbjct: 530 KIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNT 589
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI Y K A K+FD+L R++ SW+ MISG NG L F QM
Sbjct: 590 VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649
Query: 225 PHPDKETFLVVFAACAS-----------AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
D T + AACA+ + VK F E+M N+ ++
Sbjct: 650 VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSR-EVMFNN-----------TLLD 697
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ G+L +A + E+M + TV W +L
Sbjct: 698 MYSKCGNLNDAIQAFEKMG-QKTVVSWTSL 726
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 211/377 (55%), Gaps = 33/377 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS + +C L ++ GK+VH + S F ++ + + LI+MY KC R A VF+
Sbjct: 255 ISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFV 314
Query: 191 K-RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ R++ W+ MISG+A + + ++LFE+M++ G PD T++ V AC+ +EG
Sbjct: 315 EVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQ 374
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA-- 307
YF++M + + P + HY +I +LG AG + +A + + RM F T +W ++R +
Sbjct: 375 KYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGSVRGLSXL 434
Query: 308 -----QIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRK---------------- 342
+I+G++E + A + L +++P+ A ++ I +K
Sbjct: 435 IKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARKLLRETDV 494
Query: 343 -KQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDE 397
K+ T+ +E KN++ + R+ Y K+ L ++++ Y DT LHD++E
Sbjct: 495 RKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDTNNDLHDVEE 554
Query: 398 EAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 457
K L +HSE+LAI +GL+ P +P+RIIKNLRICGDCH +K++SK RE+IVRD
Sbjct: 555 SRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKFASREIIVRD 614
Query: 458 NKRFHHFRDGKCSCGDY 474
RFHHF+DG CSCG++
Sbjct: 615 TNRFHHFKDGLCSCGEF 631
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C +I ++H +A + + L+ +Y KC + + A ++F+ +
Sbjct: 154 ISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMP 213
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N +W M++GY NG + L+LF + G D +ACA + EG
Sbjct: 214 EKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEG-K 272
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
M + G I ++I + G + EA E ++ +W A+
Sbjct: 273 QVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAM 325
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 12/202 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL C S G+ H + D+ + LI MY KC RK D++ ++
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L + I N + L L +M++ ++ T V CA A+ E
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILEC----- 170
Query: 254 IMKNDYGIVPGIEH----YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ- 308
+ + + I I+ A++ V + +A + E MP + V + + Q
Sbjct: 171 MQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 230
Query: 309 -IHGDVELEDRAEELLG-DLDP 328
H + L +L+G D DP
Sbjct: 231 GFHDEALLLFHNAQLMGFDQDP 252
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 209/370 (56%), Gaps = 28/370 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS++ SC L S+ G+ VH + + +++ L++MY KC T AR +F+ +
Sbjct: 326 SSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPI 385
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
RN+ +W+ MI GYA NGQ + L L+E+M++ PD TF+ V +AC +A+ VKEG Y
Sbjct: 386 RNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKY 445
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ + +++GI P ++HY +I +LG +G + +A + ++ MP EP +W L + G
Sbjct: 446 FDSI-SEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA-KG 503
Query: 312 DVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSATNML 350
D++ + A L +LDP A + + KK +A + +
Sbjct: 504 DLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWV 563
Query: 351 EEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E N+V + S D Y E K+ G L +++ GY PDT VLH++ EE K +++ Y
Sbjct: 564 EVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISY 623
Query: 407 HSERLAIAYGLISTPPRM-PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+ LI P + P+RIIKN+R+C DCH +K S + R +I+RD+ RFHHF
Sbjct: 624 HSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFF 683
Query: 466 DGKCSCGDYW 475
GKCSC D W
Sbjct: 684 GGKCSCNDNW 693
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
P R + +L S GK + + M +D Y ++L +C L + G
Sbjct: 116 PYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNAL-QACSQLLDLRHG 174
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAAN 207
K++H + + ++ + N + +MY KC + AR +FD + +N+ SW+LMISGY
Sbjct: 175 KQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKM 234
Query: 208 GQGADGLMLFEQMRKTGPHPDKETFLVVFAA---CASAEAVKEGFL 250
G + + LF +M+ +G PD T V A C + + F+
Sbjct: 235 GNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFI 280
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 154 LRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADG 213
++ S D+ + ++ Y +C AR +F +L K++ W MI GYA NG+ D
Sbjct: 247 MQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDA 306
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI---- 269
MLF M + PD T + ++CA K LY + + +V GI++ +
Sbjct: 307 WMLFGDMLRRNVKPDSYTISSMVSSCA-----KLASLYHGQVVHGKVVVMGIDNSMLVSS 361
Query: 270 AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
A++ + G ++A E MP + W A+
Sbjct: 362 ALVDMYCKCGVTLDARVIFETMPIRNVI-TWNAM 394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 110 KVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFV-KDVELNNK 168
K+ +AI+ + AS +D ++ L+ C KR+ + + F KD ++N+
Sbjct: 6 KLHQAIDLLYSHGLAS--FDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQ 63
Query: 169 LIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPD 228
L+ +Y K A+ VFD + KR++ SW+ ++S YA G + ++F+QM P+ D
Sbjct: 64 LLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQM----PYRD 119
Query: 229 KETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV 288
++ + A AS + M+ D G P + + L + L++
Sbjct: 120 SVSYNTLIACFASNGHSGKALKVLVRMQED-GFQPTQYSH---VNALQACSQLLD----- 170
Query: 289 ERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL------------GDLDPSKAIVD 334
LR+ QIHG + + D E GD+D ++ + D
Sbjct: 171 --------------LRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFD 214
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 202/371 (54%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F S+L +C L ++ G+++H + + + + + LI MY + + K F
Sbjct: 297 TFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR 356
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ W MI+ Y +G+G + L LF QM ++ TFL + AC+ + ++G
Sbjct: 357 ENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGT 416
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF++M Y + P IEHY ++ +LG AG L EAE + MP +P +W+ L ++
Sbjct: 417 EYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKL 476
Query: 310 HGDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATN 348
H + E+ +R E + LDP S ++ I R +K+ +
Sbjct: 477 HKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGIS 536
Query: 349 MLEEKNRVSDYRSTDLYRGEYEK----MKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
LE KN V + D +Y + +K L ++++ GYVP+ VLHD+D E KE L
Sbjct: 537 WLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNL 596
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+ AIA+ L++T +P+R++KNLR+C DCHNAIK +S+I RE+IVRD RFHHF
Sbjct: 597 AHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHF 656
Query: 465 RDGKCSCGDYW 475
+DG+CSCG+YW
Sbjct: 657 KDGECSCGNYW 667
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 37/232 (15%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLC +G++++A + + + +FS LL SC L S+ GK+VH L+ TS KD
Sbjct: 40 SLCNDGRIKQAYDTFTSEIWSDP--SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDK 97
Query: 164 ELNNKLIEMYGK------------------------CCNTRL-------ARKVFDQLRKR 192
++N L+ Y K N L A+K+FD++ +R
Sbjct: 98 FISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSER 157
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LY 251
N+++W+ MI+G L LF++M G PD+ T V CA ++ G ++
Sbjct: 158 NIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVH 217
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++K + + + +A + + +G L + E+ ++ MP TV W L
Sbjct: 218 ACLLKCGFELSSVVGSSLAHMYI--KSGSLSDGEKLIKSMPIR-TVVAWNTL 266
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
S+L C L+S+ G+ VH L F + + L MY K + K+ +
Sbjct: 196 TLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSM 255
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG- 248
R + +W+ +I+G A NG + L + M+ G PDK TF+ V +AC+ + +G
Sbjct: 256 PIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQ 315
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA-EEFVERMPFEPTVEVWEALRNFA 307
++ E++K V + ++I + +G L ++ + FV+R F+ V +W ++
Sbjct: 316 QIHAEVIKAGASSVLAVVS--SLISMYSRSGCLEDSIKAFVDRENFD--VVLWSSMIAAY 371
Query: 308 QIHGDVELEDRAEELL 323
HG R EE L
Sbjct: 372 GFHG------RGEEAL 381
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 204/375 (54%), Gaps = 30/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK---DVELNNKLIEMYGKCCNTRLARKVF 186
V SS+L +C +L ++E G+ VH L+ + +V L L++MY KC A VF
Sbjct: 252 VLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVF 311
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D ++ +++ W+ MI G A NG G L LF +M G P++ TF+VV AC V
Sbjct: 312 DGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVD 371
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNF 306
EG F M D+GI P EHY + +LG AG L EAE + MP EP W AL +
Sbjct: 372 EGKEIFRSM-CDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSS 430
Query: 307 AQIHGDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQS 345
+H +V + +R + L +L+P +KA+ + KK++
Sbjct: 431 CLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKET 490
Query: 346 ATNMLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAK 400
+ +E V ++RS D R Y ++ + +++ GYV DT VL D+D EE K
Sbjct: 491 GLSFIEWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVLMDMDDEEDK 550
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
L YHSERLA+A+G+++TP MP+RI+KNLR+C DCH K++SK+ RE+I+RD R
Sbjct: 551 GNTLSYHSERLALAFGILNTPRHMPIRIVKNLRVCRDCHVYAKLVSKLYQREIIMRDRHR 610
Query: 461 FHHFRDGKCSCGDYW 475
FH FR G CSC D+W
Sbjct: 611 FHLFRGGVCSCNDFW 625
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ YGKC + AR+VF ++ +R L SW MI G+ ++ L +F+QM G
Sbjct: 188 NTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFR 247
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKND 258
PD V ACA A++ G +K +
Sbjct: 248 PDAVVLSSVLKACAHLGALERGRWVHRFLKAE 279
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 213/395 (53%), Gaps = 28/395 (7%)
Query: 109 GKVREAIE--YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G+ +A++ +M + + S+L + L + G+ +H + + F D L
Sbjct: 285 GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 344
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LIEMY KC A VF ++K+ + W +I G +G L LF +M KTG
Sbjct: 345 TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK 404
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ F+ V AC A V +G YF++M N+Y I P +EHY ++ +L AGHL EA+
Sbjct: 405 PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKN 464
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE--------------LLGDLDPSKAI 332
+E MP P +W +L ++ HG +++ + A + LL ++ + +
Sbjct: 465 TIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGM 524
Query: 333 VDKIP-----LPPR--KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMRE 381
+K+ + R +K + +E K + ++ D+ + Y KM + +++
Sbjct: 525 WEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKC 584
Query: 382 AGYVPDTRYVLHDID-EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
G+VPDT VL I+ E+ KE L+ HSERLAIA+GLI+ P +P+RI+KNLR+C DCH+
Sbjct: 585 VGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHS 644
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
K++SKI RE+IVRDN RFHHF++G CSC DYW
Sbjct: 645 VTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
++ C L ++ GK++H L F DV + L+ MY KC ARKVFD + ++
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV---FAACASAEAVKEGF 249
+ W+ +I GYA G+ L LFE+M P D ++ V+ + C E+ ++ F
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEM----PERDAFSWTVLVDGLSKCGKVESARKLF 232
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ L+D +E +++ + + V N +I Y K + A ++F Q+
Sbjct: 212 WTVLVDGLSKCGKVESARKLFDQMPCRNLVS----WNAMINGYMKSGDFDSALELFYQMP 267
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+L +W+LMI+GY NGQ D + +F M K G P T + V +A + + +G
Sbjct: 268 IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRW 327
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
M+ + + GI ++I++ G IE+ V R + V W A+ IH
Sbjct: 328 IHSYMEKNGFELDGILG-TSLIEMYAKCG-CIESALTVFRAIQKKKVGHWTAIIVGLGIH 385
Query: 311 G 311
G
Sbjct: 386 G 386
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYG--KCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+++H +A ++++L+ +Y K + AR +FD++++R+L W+ +I Y
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N DG++LF ++ PD T V CA V+EG
Sbjct: 90 ENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEG 131
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 199/371 (53%), Gaps = 38/371 (10%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD--QLRKR 192
L +C L +++ G H+ RT V +V + N LI+MY KC + A +VF +L R
Sbjct: 234 LSACAQLGALKDGLAAHDFARTIGAVGNVRVCNALIDMYSKCGSLSRALEVFHSIKLEDR 293
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
L S++ I + +G G D L LF++M PD+ T+L V C A V +G F
Sbjct: 294 TLVSYNATIQALSMHGHGEDALKLFDEM-PARIEPDEVTYLAVLGGCNHAGLVDDGRRVF 352
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ + P ++HY I+ +LG AG L EA + + MPF + +W+ L A++HG+
Sbjct: 353 DSMR----VPPNMKHYGTIVDLLGRAGRLAEAHDMIMHMPFPADIVLWQTLLGAAKMHGN 408
Query: 313 VELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSD-YRSTDL------- 364
V+L + A L DL + VD + ++ + + RV D RS D+
Sbjct: 409 VDLAELAATKLADLGSN---VDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFS 465
Query: 365 --------------------YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
+R Y + + ++ E GY P+T VLHDI EE K+ AL
Sbjct: 466 YTEIDGVMHKFINGDKEHLRWREIYRALDEIGSKICELGYEPETSNVLHDIGEEEKQYAL 525
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIA+GLISTPP +R+IKNLRICGDCH K++SK GR +I+RD RFH F
Sbjct: 526 SYHSEKLAIAFGLISTPPGETIRVIKNLRICGDCHVVAKLISKAYGRVIIIRDRARFHQF 585
Query: 465 RDGKCSCGDYW 475
DG+CSC DYW
Sbjct: 586 EDGQCSCRDYW 596
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H +L DV L L++ Y KC + AR+VFD++ R++++W+ +++G A
Sbjct: 141 QLHAILVRLGVAADVRLMTTLLDSYAKCGDLASARRVFDEMSVRDVATWNALLAGLAQGT 200
Query: 209 QGADGLMLFEQM----RKTGPH--PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
+ L+LF ++ R+ P P++ T + +ACA A+K+G + + G V
Sbjct: 201 EPNLALVLFRRLAGSFRELPPREEPNEVTVVAALSACAQLGALKDGLAAHDFART-IGAV 259
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE--------PTVEVW-------EALRNFA 307
+ A+I + G L A E + E T++ +AL+ F
Sbjct: 260 GNVRVCNALIDMYSKCGSLSRALEVFHSIKLEDRTLVSYNATIQALSMHGHGEDALKLFD 319
Query: 308 QIHGDVELEDRAEELL-------GDLDPSKAIVDKIPLPPRKKQSAT--NMLEEKNRVSD 358
++ +E ++ + G +D + + D + +PP K T ++L R+++
Sbjct: 320 EMPARIEPDEVTYLAVLGGCNHAGLVDDGRRVFDSMRVPPNMKHYGTIVDLLGRAGRLAE 379
>gi|302781368|ref|XP_002972458.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
gi|300159925|gb|EFJ26544.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
Length = 381
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 209/381 (54%), Gaps = 26/381 (6%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q G F S+L++C + ++ +G+ +H+ L + +++ + L+ MY KC
Sbjct: 2 QQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKCGKL 61
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR+VFDQ+ ++ +W +++G A +G + L +M G P+ TFL + AC
Sbjct: 62 VEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLVYAC 121
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + + E F I D+G P EH+ +I +LG G L EA+E ++ MPFEP +
Sbjct: 122 SHSGYLDEARDCF-IAMADHGFFPLPEHFRCVIDLLGRGGRLEEAQEVIDAMPFEPGLTA 180
Query: 300 WEALRNFAQIHGDVELEDRAEELLGDLDPSKAI-----------------VDKIP-LPPR 341
W + + ++ DV + A E +++P++ V+K+ L R
Sbjct: 181 WLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVEKVRRLMER 240
Query: 342 ---KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHD 394
KK+ + +E KNR+ ++ + D + YE+++ L +++EAGYVPDT VLH+
Sbjct: 241 RGVKKEPGLSCIEVKNRLHEFGAADKSHPQKDLIYEELRKLTLEIKEAGYVPDTSLVLHN 300
Query: 395 IDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELI 454
+DEE K+ L +HSERLA+ YGLI+TPP L ++ NLR+C DCH A K +S I R+++
Sbjct: 301 VDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCHTAFKYISTISNRQIV 360
Query: 455 VRDNKRFHHFRDGKCSCGDYW 475
VRD RFH F G CSC DYW
Sbjct: 361 VRDANRFHTFATGGCSCKDYW 381
>gi|224135801|ref|XP_002327307.1| predicted protein [Populus trichocarpa]
gi|222835677|gb|EEE74112.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 208/377 (55%), Gaps = 32/377 (8%)
Query: 128 YDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ FS +L +C + V+ + + F D L N LI Y +C + +++VFD
Sbjct: 154 WCTFSIVLKACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFD 213
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
++R R++ SW+ MI YA +GQ + L LF +M PD T + + +AC+ A V+E
Sbjct: 214 KMRSRDVVSWNSMIKAYALHGQAKEALHLFSEMN---VRPDSATMVALLSACSHAGLVEE 270
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G F+ M ++G+ P ++HY ++ +LG AG L+EA E + RMP +P VW AL +
Sbjct: 271 GINIFDSMSMNHGVSPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSC 330
Query: 308 QIHGDVELEDRAEELLGDLDPSKA---------------------IVDKIPLPPRKKQSA 346
+ +G+ +L A + L +L+P + I D++ +K+
Sbjct: 331 RKYGETQLAKLAADKLKELEPGNSLGYVQISNIYCSGGSYNEAGLIRDEMNGSRVRKEPG 390
Query: 347 TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ +E +NRV ++ S + Y K+ L GQ++ GYVP+T L DI+EE K++
Sbjct: 391 LSWIEIENRVHEFASGGRRHPQREAIYAKLYSLIGQLKGVGYVPETSLALQDIEEEHKQE 450
Query: 403 ALQYHSERLAIAYGLISTPPRM----PLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
L +HSE+LA+ + L+S +RI+KN+RIC DCHN +K+ S ++ +E++VRD+
Sbjct: 451 QLYHHSEKLALVFALMSEGSLCCGGGVIRIVKNIRICVDCHNFMKLASDLLQKEIVVRDS 510
Query: 459 KRFHHFRDGKCSCGDYW 475
RFHHF++ CSC DYW
Sbjct: 511 NRFHHFKNRMCSCNDYW 527
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 27/136 (19%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL------ARK 184
F+S++ SC + GK+VH L + V + N LI Y K C A +
Sbjct: 60 FASVIISCDYV----CGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACR 115
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS--- 241
VF+ + RNL SW+ MI+ + L+LF Q+ + G PD TF +V ACA
Sbjct: 116 VFESMEFRNLVSWNSMIAA------EEEALLLFRQLYREGLAPDWCTFSIVLKACAGFVT 169
Query: 242 --------AEAVKEGF 249
++ VK GF
Sbjct: 170 ERHALAVYSQVVKAGF 185
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY KC + AR+VFD++ +RN+ SW +ISGYA +G+ + LF M +P++
Sbjct: 1 MYAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDML-VDCYPNEFA 59
Query: 232 FLVVFAAC 239
F V +C
Sbjct: 60 FASVIISC 67
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 205/372 (55%), Gaps = 41/372 (11%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C NL + G++VH N LI+MY KC + A+ +F ++
Sbjct: 308 VLSSIVGACANLAASIAGRQVH--------------GNALIDMYAKCSDVIAAKDIFSRM 353
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R R++ SW +I G A +GQ L L++ M G P++ TF+ + AC+ V++G
Sbjct: 354 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 413
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M DYGI P ++HY ++ +LG +G L EAE + MPF P W AL + +
Sbjct: 414 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 473
Query: 310 HGDVELEDR-AEELLGDL---DPSKAIV-----DKIPLPPRKKQSATNMLEEKNR----- 355
G ++ R A+ L+ DPS I+ L + ++ + E + R
Sbjct: 474 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGH 533
Query: 356 --VSDYRSTDL-YRGE---------YEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEK 402
V + T++ Y GE + +K L +MR GYVPDT ++LHD+DE+ KEK
Sbjct: 534 SSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEK 593
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSER A+AYGL+ P P+RI+KNLR+CGDCH +K +S+I RE+IVRD R+H
Sbjct: 594 LLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYH 653
Query: 463 HFRDGKCSCGDY 474
HF+ GKCSC D+
Sbjct: 654 HFKGGKCSCNDF 665
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFS+L+ +C NL SI+ G++VH S + D + + L++MY KC A+ VFD +
Sbjct: 175 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 234
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLF 217
R +N SW M+SGYA +G+ + L LF
Sbjct: 235 RVKNTISWTAMVSGYAKSGRKEEALELF 262
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 142 KSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMI 201
+++ K +H + V+ L N L+ +YGKC A +VFD++ R+ +W ++
Sbjct: 85 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 144
Query: 202 SGY-AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ AN G + +G PD F + ACA+ ++ G
Sbjct: 145 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 192
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 201/372 (54%), Gaps = 26/372 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V S++ SC +L ++E G+R HE + S ++ L L++MY +C A +VF++L
Sbjct: 253 VMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEEL 312
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
++ SW +I G A +G + F QM + G P T V +AC+ V +G
Sbjct: 313 PDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGL 372
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+E MK DYGI P +EHY I+ +LG AG L EAE F+ +MP +P + AL +I
Sbjct: 373 EIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKI 432
Query: 310 HGDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATN 348
+ + E+ +R +L ++ P +++ D + KK +
Sbjct: 433 YKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWS 492
Query: 349 MLEEKNRVSDYRSTDLYRG-EYEKMKGLN----GQMREAGYVPDTRYVLHDIDEEAKEKA 403
++E +++ + D + E K+K L G++R GY +T D+DEE KE A
Sbjct: 493 LIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETA 552
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ HSE+LAIAYG++ T +RI+KNLR+C DCH A K++S++ GRE IVRD RFHH
Sbjct: 553 IHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHH 612
Query: 464 FRDGKCSCGDYW 475
FR+G CSC DYW
Sbjct: 613 FRNGLCSCRDYW 624
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L+ + ++ + +G++ H + F DV + N L+ MY C A ++F Q+
Sbjct: 122 FPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMP 181
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ SW M++GY G D +F++M PH + T+ ++ A ++
Sbjct: 182 FRDVVSWTSMVAGYCKCGMVEDAREMFDEM----PHRNLFTWSIMINGYAKNNCFEKAID 237
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
FE+MK + G+V + ++ V+ S HL A EF ER
Sbjct: 238 LFELMKRE-GVVA---NETVMVSVISSCAHL-GALEFGER 272
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 213/395 (53%), Gaps = 29/395 (7%)
Query: 109 GKVREAIE---YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
G+ R+A+E YM Q A S++ +C L ++E G+ + DV +
Sbjct: 272 GRFRDALETFRYM-QICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFV 330
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
N LI+MY KC + A VF + R+ +W +I G A NG+G + + +F +M +
Sbjct: 331 GNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQ 390
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
PD+ TF+ V AC A V +G +F M Y I P + HY +I VLG AG L EA
Sbjct: 391 TPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEAL 450
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA-------------- 331
+ +++MP +P +W L +++G+ E+ + A E L +LDP +
Sbjct: 451 DTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSN 510
Query: 332 -------IVDKIPLPPRKKQSATNMLEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMR 380
I I KK+ +M+E + ++ RS + + Y K++ + +R
Sbjct: 511 RWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLR 570
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
AGYVPD VL ++ EE K+K L +HSE+LA+ + L+++ + +RI+KNLR+C DCHN
Sbjct: 571 NAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHN 630
Query: 441 AIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
AIK++SK+ GRE+IVRD RFHHFR G CSC DYW
Sbjct: 631 AIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 31/158 (19%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL 181
ASA A + S+L +CG K + +G +VH+ + S + D + N L++MY +C +
Sbjct: 155 ASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDA 214
Query: 182 -------------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQG 210
AR +FD + +R+ +W MI GY G+
Sbjct: 215 AWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRF 274
Query: 211 ADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
D L F M+ D+ T + V ACA A++ G
Sbjct: 275 RDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG 312
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 214/397 (53%), Gaps = 28/397 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFSSLL--DSCGNLKSIEMGKRVHELLRTSAFVK-DV 163
+ GK EA++ + +SA D + +L + L ++E GK +H ++ S V+ +V
Sbjct: 228 QHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNV 287
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
+ L++MY KC + A VF + +++ W+ MI+GYA +G L +F Q+R
Sbjct: 288 RVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQ 347
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G P TF+ + AC+ + V+EG +F+ M+++YGI P IEHY ++ +LG AG + E
Sbjct: 348 GLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEE 407
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELL-------------------- 323
A V+ + P +W +L ++H ++ L R + L
Sbjct: 408 AFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAA 467
Query: 324 -GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRG----EYEKMKGLNGQ 378
G + + + +K+ + +E +V ++ + D+ Y + +N
Sbjct: 468 VGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNAL 527
Query: 379 MREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDC 438
++E G+VP T VLHD+DE KEKAL HSE+LA+A+GLIS+ P ++I+KNLR C DC
Sbjct: 528 VKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDC 587
Query: 439 HNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
H +K++SKI R+++ RD RFHHF DG C+CGDYW
Sbjct: 588 HAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR++FD L +++ W+ MI GY +G+ + L LF +M ++ PD+ T ++V +A A
Sbjct: 204 ARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQ 263
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
V+ G +KN + + A++ + G L +A + + V VW
Sbjct: 264 LGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIV-VWN 322
Query: 302 ALRNFAQIHGD 312
A+ N +HGD
Sbjct: 323 AMINGYAMHGD 333
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 211/394 (53%), Gaps = 27/394 (6%)
Query: 109 GKVREAIEYMGQDASASAGYDVFSSL--LDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G REAIE + + D ++ + L SC +L ++E+G L+ F+ + L
Sbjct: 285 GLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG 344
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI+ Y KC + A V+ +++++ ++ +ISG A GQ +F QM K G
Sbjct: 345 TSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIP 404
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P++ TF+ + C A V +G YF M +D+ + P IEHY ++ +L AG L EA
Sbjct: 405 PNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHN 464
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKA----IVDKIPLPPRK 342
++ MP + V VW +L ++H + +L + + L +L+P + ++ I R+
Sbjct: 465 LIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRR 524
Query: 343 KQSATNM-----------------LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMRE 381
A + +E V ++ D L + YEK++ L ++E
Sbjct: 525 WDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKE 584
Query: 382 AGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNA 441
AGY P T +VL D++EE KE L HSE+LA+A+ LIST + +R++KNLR+CGDCH A
Sbjct: 585 AGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEA 644
Query: 442 IKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
IK +SK+ GRE+++RDN RFH F DG CSC DYW
Sbjct: 645 IKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK REA++ + D V +L +C L +E G+ + +R ++V +
Sbjct: 184 GKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVA 243
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
L++MY KC + AR VFD + ++++ W MI GYA+NG + + LF +MRK
Sbjct: 244 TSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVR 303
Query: 227 PDKETFLVVFAACASAEAVKEG 248
PD + ++CAS A++ G
Sbjct: 304 PDCYAMVGALSSCASLGALELG 325
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS +L +C L +G +H L+ + F DV + ++ Y KC R A KVFD +
Sbjct: 107 FSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMV 166
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N+ SW MI G G+ + + LF + ++G PD + V ACA ++ G
Sbjct: 167 VKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRW 226
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
M+ + G+ + +++ + G + EA FV E + W A+
Sbjct: 227 IDRCMR-ECGLSRNVFVATSLVDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAM 277
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 211/370 (57%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS++ +C NL ++ GK++H ++R S F +V + + ++MY KC + R + +F +++
Sbjct: 268 LSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 327
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++N+ W+ +ISG+A + + + ++LFE+M++ G HP++ TF + + C V+EG
Sbjct: 328 EKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 387
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F++M+ YG+ P + HY ++ +LG AG L EA E ++ +PFEPT +W +L ++
Sbjct: 388 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVC 447
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
++EL + A + L +L+P A ++ I + KK +
Sbjct: 448 KNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSW 507
Query: 350 LEEKNRVSDYR----STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ K++V +R S R + L ++R+ GY P + LHD++ KE+ L
Sbjct: 508 IDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLM 567
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+ +GL+ P +RI+KNLRIC DCH +K S R +IVRD RFHHF
Sbjct: 568 QHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFS 627
Query: 466 DGKCSCGDYW 475
DG CSCG++W
Sbjct: 628 DGHCSCGEFW 637
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F +L C ++ K H DV L+N LI Y KC LAR+VFD +
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC-ASAEAVKEGF 249
+R+L SW+ MI Y N ++ L +F +MR G + T V +AC A+ +A++
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185
Query: 250 LYFEIMKN--DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
L+ MK D + G A++ + G + +A + E M + +V W ++
Sbjct: 186 LHCLSMKTSLDLNLYVG----TALLDLYAKCGMINDAVQVFESMQDKSSV-TWSSM---- 236
Query: 308 QIHGDVELEDRAEELL 323
+ G V+ ++ E LL
Sbjct: 237 -VAGYVQSKNYEEALL 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 132 SSLLDSCG-NLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +CG N ++E K++H L ++ ++ + L+++Y KC A +VF+ ++
Sbjct: 168 SSVLSACGANCDALEC-KKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ 226
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ +W M++GY + + L+L+ + ++ ++ T V AC++ A+ EG
Sbjct: 227 DKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 284
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 199/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C + +E G R+H+ ++ + L L++MY KC N A +VF + ++
Sbjct: 352 SALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQK 411
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ +W +MI G+A +G + F+QM G PD+ FL + AC + V G +F
Sbjct: 412 SIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFF 471
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ DY I P ++HY I+ +LG +G L EA F+ERMP P +W AL + H
Sbjct: 472 DSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKK 531
Query: 313 VELEDRAEELLGDLDPSK-------------------AIVDKIPLPPR--KKQSATNMLE 351
++ A L L+P+ A ++ + R K S + +E
Sbjct: 532 TKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIE 591
Query: 352 EKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+ +V + S D + + K++ + + GY+P T +VLH++++E KE L H
Sbjct: 592 VEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSH 651
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
E+LA+A+ LI T P M +RI+KNL++CGDCH+ +K SKI RE+++RD KRFHHF+DG
Sbjct: 652 GEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDG 711
Query: 468 KCSCGDYW 475
CSC D+W
Sbjct: 712 SCSCRDHW 719
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
+ LI+ + K + A ++FDQ+ ++N+ SW M+ G++ NG L +F +M + G
Sbjct: 285 STLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVR 344
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
P+ T + +ACA ++ G + +K D G+ A++ + G++ A E
Sbjct: 345 PNAFTIVSALSACAKIGGLEAGLRIHKYIK-DNGLHLTEALGTALVDMYAKCGNIESASE 403
Query: 287 FVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ ++ W + IHG E
Sbjct: 404 VFGETE-QKSIRTWTVMIWGWAIHGHSE 430
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 207/371 (55%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S+L +C L +++ G VH + D L+ LI+MY KC + LA + F
Sbjct: 226 ILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTS 285
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
RKR++S++ ISG A NG + L LFEQM+ G PD +++ V AC+ A V++GF
Sbjct: 286 RKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGF 345
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M + +GI P ++HY ++ +LG AG L EAE+FV MP +P +W AL ++
Sbjct: 346 HYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRV 405
Query: 310 HGDVELEDRAEELLGDLDPSK----AIVDKIPLPPRKKQSA-----------------TN 348
+G+ E+ R LL + D + ++ I K + A +
Sbjct: 406 YGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCS 465
Query: 349 MLEEKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
++E V ++ S D + E++ + + ++++ GY +TR V+ D++EE KE +
Sbjct: 466 LIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVI 525
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
+HSE+LA+A+G + T LRI+KN+RIC DCH AIK++SK+ R++ +RD K FHHF
Sbjct: 526 GHHSEKLAVAFGFLYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHF 585
Query: 465 RDGKCSCGDYW 475
+G CSC DYW
Sbjct: 586 EEGLCSCKDYW 596
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 31/149 (20%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L C N + ++G++ H ++ ++F DV + N +I Y C AR VFD+
Sbjct: 95 FTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESS 154
Query: 191 KRNLSSWH-------------------------------LMISGYAANGQGADGLMLFEQ 219
+ ++ SW+ +MISGYA NGQ + L LF +
Sbjct: 155 ELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFRE 214
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M+ P+ + V +AC+ A+ G
Sbjct: 215 MQMLDQEPNSAILVSVLSACSQLGALDHG 243
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 209/370 (56%), Gaps = 27/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C L +E+G + H + + +D+ LNN L++MY KC + A +VF+Q++
Sbjct: 263 LTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W MISG A NG + L LFE+M+ +G P+ T + V AC+ A +++G+
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWY 380
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF MK YGI P EHY +I +LG AG L +A + + M EP W L ++
Sbjct: 381 YFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATNM 349
++ L + A + + LDP A V++I R KK+ +
Sbjct: 441 RNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSW 500
Query: 350 LEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E ++ + D + +K+ L ++ GYVP+T +VL D++ E E +L+
Sbjct: 501 IEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLR 560
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LA+A+GL++ P +RI KNLRICGDCH K+ SK+ R +++RD R+HHF+
Sbjct: 561 HHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQ 620
Query: 466 DGKCSCGDYW 475
DGKCSCGDYW
Sbjct: 621 DGKCSCGDYW 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L SC + + M +H + DV + + LI+++ K A VFD++
Sbjct: 165 YSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+ W+ +I G+A N + L LF++M++ G ++ T V AC ++ G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ I+K D ++ A++ + G L +A +M E V W +
Sbjct: 282 AHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTM 330
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 9/216 (4%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
LC + + A++ M Q A +S L+ C + +++ G + L +
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L N LI MY K A ++FDQ+ +RN+ SW MIS Y+ L L M +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P+ T+ V +C V+ L+ I+K G+ + A+I V G
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR--MLHCGIIKE--GLESDVFVRSALIDVFAKLGEPE 211
Query: 283 EAEEFVERMPFEPTVEVWEA-LRNFAQ-IHGDVELE 316
+A + M + VW + + FAQ DV LE
Sbjct: 212 DALSVFDEMVTGDAI-VWNSIIGGFAQNSRSDVALE 246
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 197/356 (55%), Gaps = 25/356 (7%)
Query: 145 EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGY 204
E G+ +H + + + + L+ MY +C L ++VFDQ+ KR++ SW+ +IS Y
Sbjct: 295 EQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSY 354
Query: 205 AANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPG 264
+G G + +FE+M G P +F+ V AC+ A V EG + F M +GI P
Sbjct: 355 GVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPS 414
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLG 324
+EHY ++ +LG A L EA + +E M EP +VW +L +IH +VEL +RA L
Sbjct: 415 VEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLF 474
Query: 325 DLDPSKA-----IVD--------------KIPLPPR--KKQSATNMLEEKNRVSDYRSTD 363
DL+P+ A + D K L R +K + +E K ++ + S D
Sbjct: 475 DLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVD 534
Query: 364 LYRGEYEKMKGL----NGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLIS 419
E++ L + +++E GYVP T+ VL+D+ KE+ + HSE+LA+A+GLI+
Sbjct: 535 EVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLIN 594
Query: 420 TPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ +RI K+LR+C DCH+ K +SK +E++VRD RFHHFRDG CSCGDYW
Sbjct: 595 SSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 104 SLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
SLCK+G + +A+E + + + + + L+ SC + S+ +RVH L + F +D
Sbjct: 48 SLCKQGNLTQALELLSLEPNPAQ--HTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDP 105
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L KLI MY + ARKVFD+ R R + ++ + + G G + L ++ +M
Sbjct: 106 FLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSI 165
Query: 224 GPHPDKETFLVVFAACASAEAV-----KEGFLYFEIMKNDYGIVPGIEHYI-AIIKVLGS 277
G D+ T+ V AC ++E K ++ I+++ Y G H + ++ +
Sbjct: 166 GIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYD---GYVHIMTTLVDMYAK 222
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEAL 303
G + A +MP + V W A+
Sbjct: 223 FGCVSNASCVFNQMPVKNVVS-WSAM 247
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 17/192 (8%)
Query: 124 ASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLAR 183
A + F SLL+ G+ +H + + V + L++MY K A
Sbjct: 180 ACVASECFVSLLNK---------GREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNAS 230
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLF-EQMRKTGPH-PDKETFLVVFAACAS 241
VF+Q+ +N+ SW MI+ YA NG+ + L LF E M +T P+ T + V ACA+
Sbjct: 231 CVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAA 290
Query: 242 AEAVKEGFLY--FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
A+++G L + + K I+P I A++ + G L + ++M V
Sbjct: 291 LAALEQGRLIHGYILRKGLDSILPVIS---ALVTMYARCGKLELGQRVFDQMDKRDVVS- 346
Query: 300 WEALRNFAQIHG 311
W +L + +HG
Sbjct: 347 WNSLISSYGVHG 358
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 201/370 (54%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S+L +C L +I+ G+ +H + R L LI+MY KC + A +VF+ +
Sbjct: 341 SILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMH 400
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R LS+ + MI G+A +G+ +F +MRK G PD TF+ + +AC+ + + G
Sbjct: 401 HRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRR 460
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F M +Y I P +EHY +I +LG G EAEE + M EP +W +L ++H
Sbjct: 461 IFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMH 520
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPRKKQSATNM----------------- 349
G+VEL + + L ++P S ++ I + N+
Sbjct: 521 GNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSS 580
Query: 350 LEEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + V ++ D + R Y ++ + + EAG+VPDT VL +++EE K+ AL+
Sbjct: 581 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALR 640
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHHFR
Sbjct: 641 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFR 700
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 701 DGVCSCNDYW 710
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+++ +C SI++G++VH + ++++ N LI++Y KC A +F L +
Sbjct: 240 TVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK 299
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLY 251
++ SW+ MI GY + L+LF++M ++G +P+ T L + ACA A+ G +++
Sbjct: 300 DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIH 359
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
I K G+ ++I + G + A + M
Sbjct: 360 VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 35/152 (23%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-------- 181
F LL SC LK + G+++H + + D+ ++ LI MY K N R
Sbjct: 105 TFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVK--NGRWKDAHKVFD 162
Query: 182 -------------------------ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
A+K+FD++ +++ SW+ +ISGYA G + L L
Sbjct: 163 GSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDL 222
Query: 217 FEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
F++M KT PD+ T + V +ACA + +++ G
Sbjct: 223 FKEMMKTNVKPDESTMVTVVSACAQSGSIQLG 254
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 40/226 (17%)
Query: 133 SLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCN---TRLARKVFDQ 188
SLL +C L+S+ + +H ++++T + L+ +L+E N A VF+
Sbjct: 7 SLLHNCKTLQSLRI---IHAQMIKTGLHNTNYALS-RLLEFCILSPNFDGLPYAISVFET 62
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ NL W+ M G+A + + L+ M G P+ TF + +CA + KEG
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 249 F--------LYFEI-----------------MKNDYGIVPGIEH-----YIAIIKVLGSA 278
L +E+ K+ + + G H Y A+I S
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 279 GHLIEAEEFVERMPFEPTVEVWEA-LRNFAQIHGDVELEDRAEELL 323
G++ A++ + +P + V W A + +A + E D +E++
Sbjct: 183 GYIESAQKMFDEIPVKDVVS-WNAIISGYADTGNNKEALDLFKEMM 227
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+ +L + +L S+E G+ +H +++D + N L++MY KC LAR++FD L
Sbjct: 290 ACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN 349
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+NL SW +MI+GY +G+G D + LFEQM+ +G PD +F + AC+ + EG+ +
Sbjct: 350 KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F M+N++ I P ++HY ++ +L G+L EA EF+E MP EP +W +L +IH
Sbjct: 410 FNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHR 469
Query: 312 DVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNML 350
+V+L ++ E++ +L+P + + +K+ ++ + + +
Sbjct: 470 NVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWI 529
Query: 351 EEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
E + + + + + + E + + +M+E G+ P +Y L D+ ++AL
Sbjct: 530 EVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCG 589
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HS +LA+A+G+++ P+R+ KN R+C CH A K +SK+ GRE+I+RD+ RFHHF +
Sbjct: 590 HSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEE 649
Query: 467 GKCSCGDYW 475
G+CSC YW
Sbjct: 650 GRCSCRGYW 658
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C +G VH + + + L N L++MY C + R K+F + ++
Sbjct: 90 SVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQK 149
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MI+ Y G LF++M G PD A A E++K G
Sbjct: 150 NVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHG---- 205
Query: 253 EIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ Y I GIE + A++++ G++ EA + + + T+ W L
Sbjct: 206 -KSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTIS-WNTL 258
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 129 DVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
DVF +S LD+ +S++ GK VH + + + + N L+EMY KC AR +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + K++ SW+ +I GY+ + + LF +M P+ T + A AS +++
Sbjct: 245 DHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLE 303
Query: 247 EG 248
G
Sbjct: 304 RG 305
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G VH L F + N LI Y K A VFD++ +R++ SW+ +I G A+
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASA 242
NG + LF +M G D T L V AC +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQS 98
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 201/371 (54%), Gaps = 38/371 (10%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK--R 192
L +C + S++ G VHE R +V + N LI+MY KC + A +VF +++ R
Sbjct: 218 LSACAQIGSLQDGLCVHEFARKIGVGGNVRVCNALIDMYSKCGSLARALEVFHSIKREDR 277
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
L S++ I + +G G D L LF++M T PD+ T++ V C A V EG F
Sbjct: 278 TLVSYNTAIQAISMHGHGGDALKLFDEM-PTCIEPDEVTYIAVLCGCNHAGLVDEGLRVF 336
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M+ + P ++HY ++ +LG AG L EA + ++ MPF + +W+ L ++ HGD
Sbjct: 337 HGMR----VPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFPADIVLWQTLLGASKTHGD 392
Query: 313 VELEDRA----EELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE 368
VEL + A EL ++D ++ + + + + + + R +D R +
Sbjct: 393 VELAEVAATKLTELGSNVDGDYVLLSNV-YASKARWADVGRVRDTMRSNDVRKVPGF--S 449
Query: 369 YEKMKG-----LNG-------------------QMREAGYVPDTRYVLHDIDEEAKEKAL 404
Y ++ G +NG ++ E GY P+T VLHDI EE K+ AL
Sbjct: 450 YTEISGVMHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNVLHDIGEEEKQYAL 509
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
YHSE+LAIA+GLI+TPP LR+IKN+RICGDCH K++SK GR +I+RD RFH F
Sbjct: 510 SYHSEKLAIAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKAYGRAIIIRDRARFHRF 569
Query: 465 RDGKCSCGDYW 475
DG+CSC DYW
Sbjct: 570 EDGQCSCSDYW 580
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
++H L+ DV L L++ Y KC ARKVFD++ R+++SW+ +++G A
Sbjct: 125 QLHALVLRLGCTADVRLITTLLDSYAKCDELASARKVFDEMTVRDVASWNALLAGLAQGT 184
Query: 209 QGADGLMLFEQMRKTGPH------PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV 262
+ + L LF ++ ++ P+ T + +ACA ++++G E + G+
Sbjct: 185 EPSLALALFHRLVRSFQELPPREAPNVVTIIAALSACAQIGSLQDGLCVHEFARK-IGVG 243
Query: 263 PGIEHYIAIIKVLGSAGHLIEAEE 286
+ A+I + G L A E
Sbjct: 244 GNVRVCNALIDMYSKCGSLARALE 267
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 201/375 (53%), Gaps = 32/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++DSC +L ++ GK +HE + F KDV L L+ MY KC + A+K FD +
Sbjct: 374 TFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGI 433
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ SW MI+ A +G + L L M G ++ T V AC+ + EG
Sbjct: 434 SNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGI 493
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF + D+GI E+ + I +LG AG L EAE + MPF+ + L ++
Sbjct: 494 DYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKV 553
Query: 310 HGDVE----LEDR----------AEELLGDLDPSKAIVDKIPLPPR-------KKQSATN 348
HGDV L R + LL ++ + D + R K+Q+ +
Sbjct: 554 HGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCS 613
Query: 349 MLEEKNRVSDYRSTDL-------YRGEYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAK 400
+E ++++ ++ D R E E+ L +M+ E GYVPDTR V HD+ ++ K
Sbjct: 614 SIEYRDKIYEFSVGDTSNPRNLEIRAELER---LYSRMKEEEGYVPDTRDVFHDVSDDKK 670
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+ L++HSE++A+ +GLI++PP LRIIKNLR+C DCH K+ SKI GR +IVRD R
Sbjct: 671 EELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTR 730
Query: 461 FHHFRDGKCSCGDYW 475
FHHF G CSCGDYW
Sbjct: 731 FHHFEGGICSCGDYW 745
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L +C + K +E G+ +H + F +D + N LI M+ +C + AR+ F +
Sbjct: 273 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSI 332
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+ L +W+ M++ YA +G D L L++ M G PD+ TF V +CAS A++EG
Sbjct: 333 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 392
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
E G + A++ + G L +A++ + + + V W A+ +
Sbjct: 393 FIHEC-STSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS-WSAMIAASAQ 450
Query: 310 HGDVE 314
HG E
Sbjct: 451 HGHAE 455
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++++L +C + + GK +H+ + S ++ + N LI MY KC + + ++ +F +
Sbjct: 172 TYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTM 231
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+++ SW+ MI+ Y G D LF +M G PD TF + ACAS + +++G
Sbjct: 232 DVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDG 290
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D L N +I+MYGKC + AR+VFD++++RN SW +++ Y N + L ++++M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHL 281
+ D T V AAC V+EG + + + G + ++I + G L
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRM-VQRKAEELGFEKDVVVATSLIHLFAKCGCL 119
Query: 282 IEAEEFVERM 291
EAE M
Sbjct: 120 EEAESVFRSM 129
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
SS+L +C L +E G+ V F KDV + LI ++ KC A VF +
Sbjct: 70 TLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSM 129
Query: 190 -RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ S MI Y +G+ L + +MR G PD T+ + AC+S + + +G
Sbjct: 130 GAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDG 189
Query: 249 -FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ I+++ + I A+I + G L +++ M + V W A+
Sbjct: 190 KHIHKHILESKH--FGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVS-WNAMIAAY 246
Query: 308 QIHG 311
++G
Sbjct: 247 TLYG 250
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 202/366 (55%), Gaps = 25/366 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L + ++ S+E G+ +H F++D +N L++MY KC +AR +FD+L
Sbjct: 715 MTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLT 774
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+NL SW +MI+GY +G G D + LFEQMR +G PD +F + AC + EG+
Sbjct: 775 KKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWK 834
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M+ +Y I P ++HY I+ +L G+L EA EF+E MP EP +W +L + +IH
Sbjct: 835 FFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIH 894
Query: 311 GDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNM 349
DV+L ++ + + L+P K + +KI ++ + +
Sbjct: 895 RDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSW 954
Query: 350 LEEKNRV----SDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + +V +D R+ + E + + +MRE G+ P +Y L ++ ++AL
Sbjct: 955 IEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALC 1014
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HS +LA+ +G++ P P+R+ KN ++C CH A K +SK+ RE+I+RD+ RFHHF
Sbjct: 1015 GHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFE 1074
Query: 466 DGKCSC 471
G+CSC
Sbjct: 1075 GGRCSC 1080
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 93 AQLESLDVNL--LSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRV 150
+++ S DVNL LC+ G + A+ +G D G + +++ CG +S+E +R
Sbjct: 59 SRVLSSDVNLRIQRLCQAGDLAAALRLLGSDGGV--GVRSYCAVVQLCGEERSLEAARRA 116
Query: 151 HELLR--TSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYAA 206
H L+R T + V L +L+ Y KC + AR VFD++ R ++ W ++S YA
Sbjct: 117 HALVRAGTGGIIGSV-LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAK 175
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
G +G+ LF QM+ G PD V AS ++ EG
Sbjct: 176 AGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEG 217
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 22/186 (11%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE---------LNNKLIEMYGKCCNTRLAR 183
S+L +C L +GK VH S + D+E L +KL+ MY KC + AR
Sbjct: 304 SVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSAR 363
Query: 184 KVFDQL-RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETF-----LVVFA 237
+VFD + K N+ W+L++ GYA + + L+LFEQM + G PD+ +
Sbjct: 364 RVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCL 423
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
+CA V G+L +K +G + + A+I + + A +RMP + T+
Sbjct: 424 SCARDGLVAHGYL----VKLGFGTQCAVCN--ALISFYAKSNMIDNAVLVFDRMPHQDTI 477
Query: 298 EVWEAL 303
W ++
Sbjct: 478 S-WNSV 482
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Query: 107 KEGKVREAIEYMGQDASASAGYDV--FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K G +E + Q D S +L +L SI G+ +H LL +
Sbjct: 175 KAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACA 234
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+ N LI +Y +C A +VFD + R+ SW+ ISGY +NG + LF +M G
Sbjct: 235 VANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEG 294
Query: 225 PHPDKETFLVVFAACAS-----------AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
T L V ACA ++K G L+ ++ GI + + +
Sbjct: 295 TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLW-DLESVQSGIDEALGSKLVFMY 353
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVW 300
V G + A + MP + V VW
Sbjct: 354 V--KCGDMGSARRVFDAMPSKGNVHVW 378
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 129 DVF--SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
DVF +S+L +S++ GK VH + K + + N L+EMY C N AR VF
Sbjct: 611 DVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVF 670
Query: 187 DQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
D + +++ SW+ +I GY+ N + LF M P+ T + A AS +++
Sbjct: 671 DHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFK-PNTVTMTCILPAVASISSLE 729
Query: 247 EG 248
G
Sbjct: 730 RG 731
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S+L +C +G+ VH + + + L N L++MY C + ++F + ++
Sbjct: 516 SVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQK 575
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N+ SW MI+ Y G L ++M G PD V A E++K+G
Sbjct: 576 NVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQG 631
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
S LL L G H L F + N LI Y K A VFD++
Sbjct: 413 LSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMP 472
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ SW+ +ISG +NG ++ + LF +M G D T L V ACA
Sbjct: 473 HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACA 522
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 202/373 (54%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++LD+ + SI G+ +H + ++ F D + N L+ MY KC + A+ +FD+
Sbjct: 430 TFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKS 489
Query: 190 --RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ ++ +W +++GYA GQ L LF M++ G P+ TF+ AC +++
Sbjct: 490 SSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQ 549
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G M D+GIVP +H+ I+ +LG G L EAE+ +ER + V W AL +
Sbjct: 550 GCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDAC 608
Query: 308 QIHGDVELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSAT---NMLEEKNRVSDY 359
+ ++E +R E + LDP A + R ++AT ML++ R
Sbjct: 609 KNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 668
Query: 360 RSTDLYRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
S E Y +++ L+ ++ AGYV DT VLHD+ +E KE+
Sbjct: 669 CSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKER 728
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSE+LAIA+GL+STP PLR+IKNLR+C DCH A K++SK+ GR++++RD+ R+H
Sbjct: 729 LLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYH 788
Query: 463 HFRDGKCSCGDYW 475
HF G CSCGDYW
Sbjct: 789 HFTSGTCSCGDYW 801
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--- 189
+L+++C L ++ G+R+H + F ++ L N LI MY KC + A++ FD+L
Sbjct: 12 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
KR++ +W+ MIS + NG + L LF M G P P+ TF+ V +C V+ G
Sbjct: 72 SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC-----VEAG 126
Query: 249 FLYFEIMKNDYGIVPGI----EHYI--AIIKVLGSAGHLIEAEE-FVERMPFEPTVEV 299
L E ++ +G + G E ++ A++ G G L +A E F+ + EP+ +
Sbjct: 127 LLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR--KRNLSSWHLMISG 203
+GKR+ LL + D + N + MY KC + AR VF+++ +R+ +W+ M++
Sbjct: 342 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
Query: 204 YAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGI 261
Y +G G + LF+ M P+K TF+ V A S ++ +G ++ ++ N +
Sbjct: 402 YGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFES 461
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
I++ A++ + G L +A+ ++
Sbjct: 462 DTVIQN--ALLNMYAKCGSLDDAQAIFDK 488
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 13/207 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+L++C L V E + + +D L L+ Y + + AR FD ++
Sbjct: 224 SVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQS 283
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-----SAEAVK 246
++ SW+ M + Y + + + L+LFE+M G P TF+ ACA +A A+
Sbjct: 284 PDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIG 343
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM-PFEPTVEVWEALRN 305
+ + + + G+ A + + G L +A ER+ P W ++
Sbjct: 344 K---RIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLA 400
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKAI 332
HG L A EL ++ K +
Sbjct: 401 AYGHHG---LGKEAFELFQAMEAEKLV 424
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 107 KEGKVREAIEY---MGQDASASAGYDVFSSLLDSC--GNLKSIEMGKRVHELLRTSAFVK 161
+ G REA++ M D + F S+LDSC L S+E + +H + + +
Sbjct: 88 RNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 147
Query: 162 DVELNNKLIEMYGKCCNTRLARKVF----DQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
+ + L++ YGK + A +VF D+ +L + MIS NG + L LF
Sbjct: 148 EAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLF 207
Query: 218 EQMRKTGPHPDKETFLVVFAACA 240
M G P T + V AC+
Sbjct: 208 YAMNLEGTKPSGVTLVSVLNACS 230
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 202/370 (54%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SSL + ++ ++ G +H + + VK+ +++ L+ MYGKC + A +VF + +
Sbjct: 403 YSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK 462
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ N+ W MI+ + +G + + LFE+M G P+ TF+ V +AC+ + +GF
Sbjct: 463 EHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFK 522
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF M N + I PG+EHY ++ +LG G L EA F+E MPFEP VW AL H
Sbjct: 523 YFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKH 582
Query: 311 GDVELEDRAEELLGDLDP---------------------SKAIVDKIPLPPRKKQSATNM 349
+VE+ E L L+P + + + + +K+S +
Sbjct: 583 ANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSW 642
Query: 350 LEEKNRVSDYRSTDLYRGEYEKMKGLNGQMREA----GYVPDTRYVLHDIDEEAKEKALQ 405
++ KNR + + D +++ G+ +++E GYV +T++ + + E ++E++L
Sbjct: 643 IDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSV-EGSEEQSLW 701
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LA+A+GL+ PP P+RI KNLR CGDCH +K S+I RE+IVRD RFH F
Sbjct: 702 CHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFT 761
Query: 466 DGKCSCGDYW 475
+G CSC DYW
Sbjct: 762 NGSCSCMDYW 771
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS++L +C + + G+++H L+ F+ D + L++MY KC + LA VFD++
Sbjct: 203 FSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMP 262
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
RNL SW+ MI G+ N + +F ++ G PD+ + V +ACA
Sbjct: 263 HRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACA 310
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C L ++ GK+VH + V V + N L++MY KC A K+F
Sbjct: 303 SSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGD 362
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
R++ +W++MI G F+ M + G PD+ ++ +F A AS A+ +G +
Sbjct: 363 RDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMI 422
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ ++K G V +++ + G G +++A + V R E V W A+ H
Sbjct: 423 HSHVLKT--GHVKNSRISSSLVTMYGKCGSMLDAYQ-VFRETKEHNVVCWTAMITVFHQH 479
Query: 311 G 311
G
Sbjct: 480 G 480
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR--K 191
LL++ LKS++ ++H L T+ + N L+ +Y KC + +F+
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FL 250
N+ +W +I+ + + + L F +MR TG +P+ TF + ACA A + EG +
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ I K+ + P + A++ + G ++ AE + MP V W ++
Sbjct: 223 HALIHKHCFLNDPFVA--TALLDMYAKCGSMLLAENVFDEMPHRNLVS-WNSM 272
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 203/370 (54%), Gaps = 29/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ +C +L +++ G+ H + + + N LI+MY KC L+R+VF+ + R
Sbjct: 446 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 505
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ MI+GY +G G + LF +M G PD TF+ + +AC+ + V EG +F
Sbjct: 506 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 565
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M++ YG+ P +EHYI ++ +L G L EA EF++ MP V VW AL +++ +
Sbjct: 566 HVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 625
Query: 313 VELEDRAEELLGDLDPSKA-----------------------IVDKIPLPPRKKQSATNM 349
++L + ++ +L P I+ K+ KK +
Sbjct: 626 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV--QGFKKSPGCSW 683
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + D + Y ++ + +++ GY PDT +VL D++EE KEKAL
Sbjct: 684 IEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALI 743
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIAYG++S + + KNLR+CGDCH IK +S + R +IVRD RFHHF+
Sbjct: 744 CHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFK 803
Query: 466 DGKCSCGDYW 475
+G+CSCGD+W
Sbjct: 804 NGQCSCGDFW 813
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L +C +L + MG+++H LL S D+ N L+ MY K A +FD++
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ S+ ++SGY NG+ + ++F++M+ PD T + + AC+ A++ G
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG-- 460
Query: 251 YFEIMKNDYG--IVPGI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ +G I+ G+ E I A+I + G + + + MP V W +
Sbjct: 461 -----RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMI 514
Query: 305 NFAQIHG 311
IHG
Sbjct: 515 AGYGIHG 521
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L +C L G+ +H + D+ ++ L++MY KC A +F +
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 190 RKRNLSSWHLMISGYAANG--QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
R+L +W+ M++GYA +G A +L QM+ P+ T + + A A+ +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 248 G--FLYFEIMKNDYG-------IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
G + I + + G+ A++ + G L+ A + MP V
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV- 305
Query: 299 VWEAL 303
W AL
Sbjct: 306 TWSAL 310
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
S V L L++MY KC + AR+VFD + RN +W +I G+ + +L
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326
Query: 217 FEQMRKTGPHPDKETFLV-VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
F+ M G T + ACAS + ++ G ++ G+ + +++ +
Sbjct: 327 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMY 385
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
AG + +A + M + TV + + Q RAEE
Sbjct: 386 AKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ-------NGRAEE 424
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 202/370 (54%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD-QLRK 191
S++ + L ++ G H + D +L++ LI MY KC A VF+
Sbjct: 213 SVISAIAYLGALAQGLWAHAYVCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCAL 272
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R++ +W+ M++G+ A+G L LF +M +G P+K TF + AC+ V+EG Y
Sbjct: 273 RSVDTWNAMLAGFTASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGY 332
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
FE M N I P I HY ++ + AG +AEE ++ MP EP VW+AL + +
Sbjct: 333 FERMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYS 392
Query: 312 DVELEDRAEELLGDLDPS------------------KAI--VDKIPL-PPRKKQSATNML 350
+ EL +A L + P+ K + V K+ L +K ++ +
Sbjct: 393 NFELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSI 452
Query: 351 EEKNRVSDYRSTDLY----RGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE-AKEKALQ 405
E + ++ S D R YE + + Q++ AGY PDT VL DID+E KE +L
Sbjct: 453 ELDGVIHEFISGDKSHSRKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLA 512
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+A+GLIST P P+RI+KNLR+CGDCHNAIK++SKI GR ++VRD RFH FR
Sbjct: 513 LHSERLALAFGLISTAPGTPIRIVKNLRVCGDCHNAIKLLSKIYGRCIMVRDANRFHRFR 572
Query: 466 DGKCSCGDYW 475
+G CSCGDYW
Sbjct: 573 EGSCSCGDYW 582
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ N L+ Y + +T R+ F Q+ R+ SW+ +I+ ANG+ + + +F +M
Sbjct: 140 DMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTVIAWCVANGEHEEAVAVFREML 199
Query: 222 KTGP-HPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
+ PD+ T + V +A A A+ +G + + + + + + + A+I + G
Sbjct: 200 ASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKEIEVDEKLSS--ALINMYSKCG 257
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPL 338
+ A E +V+ W A+ G +RA EL ++ S + +KI
Sbjct: 258 FIEGAVYVFENSCALRSVDTWNAMLAGFTASG---CSERALELFTRMESSGFVPNKITF 313
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 13/156 (8%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML---FEQMR 221
+ N LI Y C ARKVFD + ++ +W+ ++ GYA QG D L F QM
Sbjct: 112 VRNGLIHAYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYA---QGRDTGALREFFAQM- 167
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP---GIEHYIAIIKVLGSA 278
P D ++ V A C + +E F M P + I+ I LG+
Sbjct: 168 ---PARDSVSWNTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGAL 224
Query: 279 GHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
+ A +V R E ++ AL N G +E
Sbjct: 225 AQGLWAHAYVCRKEIEVDEKLSSALINMYSKCGFIE 260
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 198/367 (53%), Gaps = 25/367 (6%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LL +C NL ++E G++VH + + L N LI MY + N A VF + +N
Sbjct: 133 LLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFKGMHNKN 192
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
+ +W +ISG A NG G + + FE+M K G PD TF V +AC++ V +G + F
Sbjct: 193 VVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVDKGMIIFA 252
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M ++GIVP I HY ++ +LG AG L +A + + M +P +W L +IH +V
Sbjct: 253 RMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGACRIHRNV 312
Query: 314 EL---------EDRAEE---------LLGDLDPSKAIVDKIPLPPRK---KQSATNMLEE 352
L E +A+E L +D K + + K A++ +E
Sbjct: 313 ILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGIQTTPASSSIEL 372
Query: 353 KNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
K +V ++ D+ + YE + ++ Q++ AGYV + L ++D E K L YHS
Sbjct: 373 KGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRYVLSYHS 432
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LAIA+G+++TPP +RI KNLRIC DCHN KI+S + R++I+ D+ RFHHFR G
Sbjct: 433 EKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITDHTRFHHFRGGH 492
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 493 CSCNDYW 499
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G++VH + + D L L+++Y C A KVFD++R+R+ +W+++IS Y
Sbjct: 43 GEQVHARILSDGHQSDSLLLTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMR 102
Query: 207 NGQGADGLMLFEQMR--KTGPHPDKETFLVVFAACASAEAVKEG 248
N + D L++F+ M + G PD T L++ ACA+ A++ G
Sbjct: 103 NRRTRDVLVIFDGMLSGELGCEPDDVTCLLLLQACANLGALEFG 146
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 201/375 (53%), Gaps = 32/375 (8%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS++DSC +L ++ GK +HE + F KDV L L+ MY KC + A+K FD +
Sbjct: 282 TFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGI 341
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ SW MI+ A +G + L L M G ++ T V AC+ + EG
Sbjct: 342 SNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGI 401
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF + D+GI E+ + I +LG AG L EAE + MPF+ + L ++
Sbjct: 402 DYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKV 461
Query: 310 HGDVE-----------LEDR---AEELLGDLDPSKAIVDKIPLPPR-------KKQSATN 348
HGDV LE + LL ++ + D + R K+Q+ +
Sbjct: 462 HGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCS 521
Query: 349 MLEEKNRVSDYRSTDL-------YRGEYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAK 400
+E ++++ ++ D R E E+ L +M+ E GYVPDTR V HD+ ++ K
Sbjct: 522 SIEYRDKIYEFSVGDTSNPRNLEIRAELER---LYSRMKEEEGYVPDTRDVFHDVSDDKK 578
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
E+ L++HSE++A+ +GLI++PP LRIIKNLR+C DCH K+ SKI GR +IVRD R
Sbjct: 579 EELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTR 638
Query: 461 FHHFRDGKCSCGDYW 475
FHHF G CSCGDYW
Sbjct: 639 FHHFEGGICSCGDYW 653
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
FSS+L +C + K +E G+ +H + F +D + N LI MY +C + AR+ F +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
K+ L +W+ M++ YA +G D L L++ M G PD+ TF V +CAS A++EG
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
E G + A++ + G L +A++ + + + V W A+ +
Sbjct: 301 FIHEC-STSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS-WSAMIAASAQ 358
Query: 310 HGDVE 314
HG E
Sbjct: 359 HGHAE 363
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 30/149 (20%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKC------------- 176
SS+L +C L +E G+ V F KDV + LI ++ KC
Sbjct: 50 TLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSM 109
Query: 177 ----------------CNT-RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
C + + ++ +F + +++ SW+ MI+ Y G D LF +
Sbjct: 110 GAMRDIISVTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHR 169
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
M G PD TF + ACAS + +++G
Sbjct: 170 MCTLGHTPDIYTFSSILGACASPKRLEDG 198
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR+VFD++++RN SW +++ Y N + L ++++M + D T V AAC
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
V+EG + + + G + ++I + G L EAE M
Sbjct: 61 LLDVEEGRM-VQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSM 109
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 205/372 (55%), Gaps = 41/372 (11%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V SS++ +C NL + G++VH N LI+MY KC + A+ +F ++
Sbjct: 177 VLSSIVGACANLAASIAGRQVH--------------GNALIDMYAKCSDVIAAKDIFSRM 222
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R R++ SW +I G A +GQ L L++ M G P++ TF+ + AC+ V++G
Sbjct: 223 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 282
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F+ M DYGI P ++HY ++ +LG +G L EAE + MPF P W AL + +
Sbjct: 283 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 342
Query: 310 HGDVELEDR-AEELLGDL---DPSKAIV-----DKIPLPPRKKQSATNMLEEKNR----- 355
G ++ R A+ L+ DPS I+ L + ++ + E + R
Sbjct: 343 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGH 402
Query: 356 --VSDYRSTDL-YRGE---------YEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEK 402
V + T++ Y GE + +K L +MR GYVPDT ++LHD+DE+ KEK
Sbjct: 403 SSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEK 462
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L +HSER A+AYGL+ P P+RI+KNLR+CGDCH +K +S+I RE+IVRD R+H
Sbjct: 463 LLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYH 522
Query: 463 HFRDGKCSCGDY 474
HF+ GKCSC D+
Sbjct: 523 HFKGGKCSCNDF 534
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VFS+L+ +C NL SI+ G++VH S + D + + L++MY KC A+ VFD +
Sbjct: 44 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 103
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLF 217
R +N SW M+SGYA +G+ + L LF
Sbjct: 104 RVKNTISWTAMVSGYAKSGRKEEALELF 131
>gi|357498695|ref|XP_003619636.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494651|gb|AES75854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 403
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 201/358 (56%), Gaps = 17/358 (4%)
Query: 126 AGY---DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLA 182
AGY F L+ N+ E+ + ++ A + L LI+MY KC A
Sbjct: 55 AGYVQVGCFMEDLEFFHNMLQSEVKPNEYTMVSALAIKMNDRLLASLIDMYAKCGEIDSA 114
Query: 183 RKVFDQLR-KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
VF + + KR + W+ MI G+A +G+ + + LFEQM+ P+K TF+ + AC+
Sbjct: 115 SSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPNKVTFIALLNACSH 174
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
+KEG YFE+M +DYGI P IEHY ++ +L + L EAEE + MP P V +W
Sbjct: 175 GYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMILSMPMAPDVAIWG 234
Query: 302 ALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI---PLPPRKKQSATNMLEEKNRVSD 358
AL N +I+ D+E R ++ ++DP+ + + + + +L E+N +
Sbjct: 235 ALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARILRERNEI-- 292
Query: 359 YRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID-EEAKEKALQYHSERLAIAYGL 417
R Y ++ + +++ AGYVP+ VL D D EE KE L HSE+LAIA+GL
Sbjct: 293 -------REIYSFLEEMIRKLKIAGYVPELGEVLLDFDDEEDKETTLSVHSEKLAIAFGL 345
Query: 418 ISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
++T P P+ I+KNLR+CGDCH AIK +SK+ R +IVRD R+HHF+DG CSC DYW
Sbjct: 346 MNTAPGTPICIVKNLRVCGDCHEAIKFISKVYDRVIIVRDRMRYHHFKDGVCSCKDYW 403
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
SA +D+ N +I +Y N A+ +FD++ +R++ SW +I+GY G + L
Sbjct: 10 SAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFMEDLEF 69
Query: 217 FEQMRKTGPHPDKETFLVVFA 237
F M ++ P++ T + A
Sbjct: 70 FHNMLQSEVKPNEYTMVSALA 90
>gi|218198170|gb|EEC80597.1| hypothetical protein OsI_22944 [Oryza sativa Indica Group]
Length = 563
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 200/347 (57%), Gaps = 13/347 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+S+L +C L ++E+G++VH + KD+ L+N L++MY KC + + A +F ++
Sbjct: 229 TLTSVLRACTGLVTLEVGRQVHA--HVLKYDKDLILHNALLDMYCKCGSLQDADALFGRM 286
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+R++ SW MISG A NG+ + L +F+ M+ GP P+ T + V AC+ A V++G+
Sbjct: 287 PQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVLFACSHAGLVEDGW 346
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF M+ +GI P EH ++ +LG AG L +A +F+ M F+P +W L ++
Sbjct: 347 YYFSSMEKLFGIQPEREHCNCMVDLLGRAGKLDDAVKFIHEMNFQPDSVIWRTLLGACRM 406
Query: 310 HGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSD-YRSTDLYRGE 368
H + +L A + + L+P +K + M+ ++ D RS
Sbjct: 407 HKNADLAAYAAKEILRLEPDDQDAEK----------SWKMMRDRGVKKDPGRSWIELESI 456
Query: 369 YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRI 428
+++ L ++ GY P T +VL D+ E KE L+YHSE+LAIA+G ++ P+RI
Sbjct: 457 IQELSRLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRI 516
Query: 429 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+KNLRICGDCH K++SK G+ +I+RD RFHHF+DG CSC DYW
Sbjct: 517 MKNLRICGDCHAFAKLVSKSEGKVIIIRDPVRFHHFQDGVCSCNDYW 563
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA-ANGQGADGLMLFEQMRKT 223
++N L+ +Y K A ++FD + +N+ SW +++ A A G+ D L LF M +
Sbjct: 109 VSNSLVSLYAKFGLLDDALRLFDGMPHKNVVSWTTVVAALANARGRKEDALRLFVAMLRD 168
Query: 224 GPHPDKETFLVVFAACAS 241
G P+ TF + AC++
Sbjct: 169 GVAPNMYTFSSILGACST 186
>gi|125524834|gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indica Group]
Length = 370
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 208/370 (56%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L + +L S+E G+ +H +++D + N L++MY KC LAR++FD L
Sbjct: 1 MACILPTAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLT 60
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+NL SW +MI+GY +G+G D + LFEQM+ +G PD +F + AC+ + EG+
Sbjct: 61 NKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWR 120
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+F M+N++ I P ++HY ++ +L G+L EA EF+E MP EP +W +L +IH
Sbjct: 121 FFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 180
Query: 311 GDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNM 349
+V+L ++ E++ +L+P + + +K+ ++ + +
Sbjct: 181 RNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSW 240
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + + + + + E + + +M+E G+ P +Y L D+ ++AL
Sbjct: 241 IEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALC 300
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HS +LA+A+G+++ P+R+ KN R+C CH A K +SK+ GRE+I+RD+ RFHHF
Sbjct: 301 GHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFE 360
Query: 466 DGKCSCGDYW 475
+G+CSC YW
Sbjct: 361 EGRCSCRGYW 370
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 209/370 (56%), Gaps = 27/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C L +E+G++VH + F +D+ LNN LI+MY KC + A F ++
Sbjct: 256 LTSVLRACTGLALLELGRQVH--VHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMV 313
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++++ SW M++G A NG L LFE M+++G P+ T L V AC+ A V++G+
Sbjct: 314 EKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWY 373
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF MK +G+ PG EHY +I +LG AG L EA + + M EP W L ++H
Sbjct: 374 YFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRK-------KQSATN----------M 349
+V+L A + + +L+P A ++ I ++ +++ TN
Sbjct: 434 RNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSW 493
Query: 350 LEEKNRVSDYRSTDLYRGEYE----KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E ++ + D + E ++ L ++ GYVPDT +VL D++ E KE +L+
Sbjct: 494 IEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLR 553
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LAI +GL++ +RI KNLRICGDCH K++S++ R +++RD R+HHF+
Sbjct: 554 YHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQ 613
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 614 DGVCSCGDYW 623
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L +C L ++ +++H + + DV + + LI++Y K + A VFD++
Sbjct: 158 YSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP 214
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
R+L W+ +I G+A N G + L LF++M++ G D+ T V AC ++ G
Sbjct: 215 TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQ 274
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ ++K D ++ A+I + G L +A RM E V W +
Sbjct: 275 VHVHVLKFDQDLILN----NALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTM 323
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 9/224 (4%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIE 145
PLR A L + C + + A+ M + A +S L+ C +++
Sbjct: 13 PLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQ 72
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
GKRVHE + + + + N L+ MY K A +FD++ +RN+ SW MIS Y
Sbjct: 73 EGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY- 131
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGI 265
+N L M + G P+ T+ V AC +++ L+ I+K G+ +
Sbjct: 132 SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQ--LHCGIIKT--GLESDV 187
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEA-LRNFAQ 308
A+I V L A + MP V VW + + FAQ
Sbjct: 188 FVRSALIDVYSKWSDLDNALGVFDEMPTRDLV-VWNSIIGGFAQ 230
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 202/373 (54%), Gaps = 28/373 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++LD+ + SI G+ +H + ++ F D + N L+ MY KC + A+ +FD+
Sbjct: 564 TFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKS 623
Query: 190 --RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
+ ++ +W +I+GYA GQ L LF M++ G P+ TF+ AC +++
Sbjct: 624 SSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQ 683
Query: 248 GFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
G M D+GI+P +H+ I+ +LG G L EAE+ +ER + V W AL +
Sbjct: 684 GCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDAC 742
Query: 308 QIHGDVELEDRAEELLGDLDPSKA-----IVDKIPLPPRKKQSAT---NMLEEKNRVSDY 359
+ ++E +R E + LDP A + R ++AT ML++ R
Sbjct: 743 KNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 802
Query: 360 RSTDLYRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
S E Y +++ L+ ++ AGYV DT VLHD+ +E KE+
Sbjct: 803 CSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKER 862
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFH 462
L HSE+LAIA+GL+STP PLR+IKNLR+C DCH A K++SK+ GR++++RD+ R+H
Sbjct: 863 LLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYH 922
Query: 463 HFRDGKCSCGDYW 475
HF G CSCGDYW
Sbjct: 923 HFTSGTCSCGDYW 935
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--- 189
+L+++C L ++ G+R+H + F ++ L N LI MY KC + A++ FD+L
Sbjct: 146 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 205
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEG 248
KR++ +W+ MIS + NG + L LF M + G P P+ TF+ V +C V+ G
Sbjct: 206 SKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSC-----VEAG 260
Query: 249 FLYFEIMKNDYGIVPGI----EHYI--AIIKVLGSAGHLIEAEE-FVERMPFEPTVEV 299
L E ++ +G + G E ++ A++ G G L +A E F+ + EP+ +
Sbjct: 261 LLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSL 318
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR--KRNLSSWHLMISG 203
+GKR+ LL + D + N + MY KC + AR VF+++ +R+ +W+ M++
Sbjct: 476 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAA 535
Query: 204 YAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGI 261
Y +G G + LF+ M P+K TF+ V A S ++ +G ++ ++ N +
Sbjct: 536 YGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFES 595
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
I++ A++ + G L +A+ ++
Sbjct: 596 DTVIQN--ALLNMYAKCGSLDDAQAIFDK 622
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 13/207 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHE-LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+L++C L+ V E + + +D L L+ Y + + AR FD ++
Sbjct: 358 SVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQS 417
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-----SAEAVK 246
++ SW+ M + Y + + + L+LFE+M G P TF+ ACA +A A+
Sbjct: 418 PDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIG 477
Query: 247 EGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM-PFEPTVEVWEALRN 305
+ + + + G+ A + + G L +A ER+ P W ++
Sbjct: 478 K---RIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLA 534
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKAI 332
HG L A EL ++ K +
Sbjct: 535 AYGHHG---LGKEAFELFQAMEAEKLV 558
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 107 KEGKVREAIEY---MGQDASASAGYDVFSSLLDSC--GNLKSIEMGKRVHELLRTSAFVK 161
+ G REA++ M +D + F S+LDSC L S+E + +H + + +
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 281
Query: 162 DVELNNKLIEMYGKCCNTRLARKVF----DQLRKRNLSSWHLMISGYAANGQGADGLMLF 217
+ + L++ YGK + A +VF D+ +L + MIS NG + L LF
Sbjct: 282 EAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341
Query: 218 EQMRKTGPHPDKETFLVVFAACA 240
M G P T + V AC+
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACS 364
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHE--LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
+ LL +CG L++++ G+R+H L R L + LI M+ KC N A + D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 188 QLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
R ++ S MI + +G+ + LF++M P+ + + AC+ +
Sbjct: 105 --RFASVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159
Query: 248 G-FLYFEIMKNDYGIVPGIEHYI---AIIKVLGSAGHLIEAEEFVERMPFEPTVEV--WE 301
G ++ +I D+ E+ + A+I + G LI+A++ +R+P +V W
Sbjct: 160 GRRIHSQISDRDFE-----ENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWN 214
Query: 302 AL 303
A+
Sbjct: 215 AM 216
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 201/374 (53%), Gaps = 35/374 (9%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-K 191
S++ + L ++ G H + + +L++ LI MY KC A VFD + K
Sbjct: 215 SVVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGK 274
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+L +W+ M++G+ ANG L LF +M T P+K TF V AC+ V+EG Y
Sbjct: 275 RSLDTWNAMLAGFTANGYSERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKY 334
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F+ M YGI P I HY ++ + AG +AEE ++ MP EP + +AL + H
Sbjct: 335 FQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHK 394
Query: 312 DVELEDRAEELLGD-----------------LDPSKAIVDKIPLPPRK--------KQSA 346
++EL + L + LD + V K+ RK K
Sbjct: 395 NLELGKKVGHRLIEAAANDHAGYVLLSNIYALDGNWGGVHKV----RKLMLDRGVLKTPG 450
Query: 347 TNMLEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE-AKE 401
++ +E + ++ S D R Y+ + + Q++ +GY PDT VL DID+E KE
Sbjct: 451 SSSVELNGVIHEFISGDKSHSRKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDDEDVKE 510
Query: 402 KALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+L HSE+LAIA+GLIST P P+R++ NLRICGDCHNAIK++SKI GR +IVRD RF
Sbjct: 511 SSLALHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRDANRF 570
Query: 462 HHFRDGKCSCGDYW 475
HHFR G CSCGDYW
Sbjct: 571 HHFRKGSCSCGDYW 584
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 168 KLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM-LFEQMRKTGPH 226
+L+ Y C AR+VFD ++ +W+ ++ GYA G D L F +M P
Sbjct: 116 RLVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARM----PS 171
Query: 227 PDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP---GIEHYIAIIKVLGSAGHLIE 283
D ++ V + C E F M P + ++ I LG+ H +
Sbjct: 172 RDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLW 231
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
A +V R E ++ AL N G +E
Sbjct: 232 AHAYVFRKCIEVEEKLSSALINMYSKCGFIE 262
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 209/388 (53%), Gaps = 47/388 (12%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD-------VELNNKLIEMYGKCCNTRLAR 183
S LL SCG L S+++GK+ H ++ +D + +NN LI MY KC + + A
Sbjct: 538 LSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAA 597
Query: 184 KVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE 243
+VF ++ ++++ SW MI+G A +G + L LFE+M+ G P++ TFL + ACA
Sbjct: 598 QVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGG 657
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER--MPFEP----TV 297
V+EG YF+ M NDYG+ P IEHY +I + G +G A+ VE F+P +
Sbjct: 658 LVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDIL 717
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPS-------------------------KAI 332
+W+ L ++L A + +L+P KA+
Sbjct: 718 NLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAM 777
Query: 333 VDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDT 388
DK +K+ + ++ NR + + D+Y + YEK+ LN R GYVP T
Sbjct: 778 RDK----GLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMT 833
Query: 389 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTP-PRMPLRIIKNLRICGDCHNAIKIMSK 447
VLHD+DE KE L HSE+LA+++GL++ +R++KNLR+C DCH+ +K S
Sbjct: 834 ELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASL 893
Query: 448 IVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+ RE+++RD++RFH FRDG CSCGDYW
Sbjct: 894 LEKREILLRDSQRFHLFRDGSCSCGDYW 921
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F SLL + L ++ G+ +H + + D + N LI Y KC AR++F++L
Sbjct: 329 TFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERL 388
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R++ SW+ M++GY N Q +F++M +G PD + ++F A A G
Sbjct: 389 LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNA---ASRDSSGL 445
Query: 250 LYFEIMKNDYG-----IVPG---IEHYIAIIKVLGSAGHLIEAEEFVERM 291
+YF K +G I PG + AI+K+ + +AE+ + M
Sbjct: 446 IYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGM 495
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++S++++CG+ + G VH + A ++ L N L+ YGKC N + A ++F+++
Sbjct: 227 TYASVVNACGSSGEEKYGAMVHGRI-IKAGLEATNLWNSLVTFYGKCGNLQHASQLFERI 285
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP--HPDKETFLVVFAACASAEAVKE 247
++++ SW+ MI+ G+G + L LF +M K P P++ TFL + +A + A++
Sbjct: 286 SRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRC 345
Query: 248 G 248
G
Sbjct: 346 G 346
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 127 GYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVF 186
G+ + S L SC I + +++H + F D + I MY +C A++VF
Sbjct: 121 GFSLASLLKVSCST-GEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVF 179
Query: 187 DQ--LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAE 243
D+ L ++ W+ +I+ Y +G + L LF +M G P + T+ V AC S+
Sbjct: 180 DETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSG 239
Query: 244 AVKEGFLYFEIMKNDYGIVPGIEH---YIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
K G M + I G+E + +++ G G+L A + ER+ + V W
Sbjct: 240 EEKYG-----AMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVS-W 293
Query: 301 EAL 303
A+
Sbjct: 294 NAM 296
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 136 DSCGNLKSIEMGKRVHE--LLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
DS G L GK +H L R + + ++N +++MY K A K+F ++ R+
Sbjct: 441 DSSG-LIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRD 499
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
SW+ M+ GY+ N + D LM+F + K G D + ++ +C +++ G
Sbjct: 500 SYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLG 554
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 211/376 (56%), Gaps = 37/376 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +C + E GK +H + S + V +NN LI+MY +C N +AR VF+ ++
Sbjct: 439 LTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 498
Query: 191 -KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
KR++ SW MI+G A +G G + + +F +M ++G PD+ +F+ + AC+ A +KEG
Sbjct: 499 EKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGE 558
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
YF MK Y I P +EHY ++ + G +G L +A F+ +MP PT VW L
Sbjct: 559 GYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSS 618
Query: 310 HGDVELEDRAEELLGDLDPSKA--------------------------IVDKIPLPPRKK 343
HG++EL ++ ++ L +LDP+ + IV +I KK
Sbjct: 619 HGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRI-----KK 673
Query: 344 QSATNMLEEKNRVSDYRSTDLYRG----EYEKMKGLNGQMR-EAGYVPDTRYVLHDIDEE 398
+A +++E + + + + + +EK+K + ++R EAGY P+ L+D++EE
Sbjct: 674 ITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEE 733
Query: 399 AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
KE + HSE+LA+A+ L P +RI+KNLRIC DCH +K+ S++ G E+++RD
Sbjct: 734 EKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRICRDCHAVMKLTSRVYGVEIVIRDR 793
Query: 459 KRFHHFRDGKCSCGDY 474
RFH F+DG CSCGDY
Sbjct: 794 NRFHSFKDGSCSCGDY 809
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A+++F ++ R+ SW MI G++ NG + F ++ +
Sbjct: 374 NVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMR 433
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P++ + V +AC+ + A + G L+ + K+ Y + + + A+I + G++ A
Sbjct: 434 PNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNN--ALIDMYSRCGNVPMAR 491
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKI 336
E M + ++ W ++ +HG E A + ++ S + D+I
Sbjct: 492 LVFEGMQEKRSIVSWTSMIAGLAMHGHGE---EAIRIFNEMTESGVMPDEI 539
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 35/153 (22%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ ++ + N +S+ G ++H + + LI MYG+C ARKVFD++
Sbjct: 276 FAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMP 335
Query: 191 K-------------------------------RNLSSWHLMISGYAANGQGADGLMLFEQ 219
+ RN +SW++M++GY G+ +F +
Sbjct: 336 QPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSE 395
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
M PH D ++ + + + E F YF
Sbjct: 396 M----PHRDDVSWSTMIVGFSHNGSFNESFSYF 424
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 213/383 (55%), Gaps = 27/383 (7%)
Query: 120 QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
Q A A F + L +C ++++G+ V + + V L + L+ MY +C
Sbjct: 198 QAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCGVV 257
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
AR+ FD L++RN+ +W MI+GY +G G + + LF MR GP P+ TF+ V +AC
Sbjct: 258 DKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLSAC 317
Query: 240 ASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFV-ERMPFEPTVE 298
A A V EG F MK YG+VP +EHY +++ + G AG L EA +F+ + MP EP E
Sbjct: 318 AHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEPGPE 377
Query: 299 VWEALRNFAQIHGDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR------ 341
VW A+ ++H + L E L L+P A+ K+ +
Sbjct: 378 VWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMHHVEKVRNTMI 437
Query: 342 ----KKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLH 393
KKQ +++E +R + + Y ++ L ++ AGY+P+T VLH
Sbjct: 438 KRRLKKQIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEELIHRITAAGYMPETESVLH 497
Query: 394 DIDEEAKEKALQYHSERLAIAYGLI-STPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRE 452
+++EE +E AL+YHSE+LA+AYGL+ S P+R+IKNLRICGDCH AIK MS + RE
Sbjct: 498 ELEEEEREGALRYHSEKLAVAYGLMMSVGSTTPIRVIKNLRICGDCHLAIKFMSAVENRE 557
Query: 453 LIVRDNKRFHHFRDGKCSCGDYW 475
++VRD RFHHF+DGKCSC +YW
Sbjct: 558 IVVRDKHRFHHFKDGKCSCLEYW 580
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+++ +C +L ++ G +H F D + L+ +Y KC +ARK+FD +R
Sbjct: 108 FTAVAKACADLSALRTGAAIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIR 167
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R++ +W+ MISGY NG G+ ++++M+ PD TF+ +ACA A A+ G
Sbjct: 168 DRSVVAWNAMISGYEQNGLAERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLG 225
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 202/370 (54%), Gaps = 29/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ +C +L +++ G+ H + + + N LI+MY KC L+R+VF+ + R
Sbjct: 331 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 390
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ MI+GY +G G + LF +M G PD TF+ + +AC+ + V EG +F
Sbjct: 391 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 450
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M + YG+ P +EHYI ++ +L G L EA EF++ MP V VW AL +++ +
Sbjct: 451 HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 510
Query: 313 VELEDRAEELLGDLDPSKA-----------------------IVDKIPLPPRKKQSATNM 349
++L + ++ +L P I+ K+ KK +
Sbjct: 511 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV--QGFKKSPGCSW 568
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + D + Y ++ + +++ GY PDT +VL D++EE KEKAL
Sbjct: 569 IEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALI 628
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIAYG++S + + KNLR+CGDCH IK +S + R +IVRD RFHHF+
Sbjct: 629 CHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFK 688
Query: 466 DGKCSCGDYW 475
+G+CSCGD+W
Sbjct: 689 NGQCSCGDFW 698
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L +C +L + MG+++H LL S D+ N L+ MY K A +FD++
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ S+ ++SGY NG+ + ++F++M+ PD T + + AC+ A++ G
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG-- 345
Query: 251 YFEIMKNDYG--IVPGI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ +G I+ G+ E I A+I + G + + + MP V W +
Sbjct: 346 -----RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMI 399
Query: 305 NFAQIHG 311
IHG
Sbjct: 400 AGYGIHG 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
S V L L++MY KC + AR+VFD + RN +W +I G+ + +L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211
Query: 217 FEQMRKTGPHPDKETFLV-VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
F+ M G T + ACAS + ++ G ++ G+ + +++ +
Sbjct: 212 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMY 270
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
AG + +A + M + TV + + Q RAEE
Sbjct: 271 AKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ-------NGRAEE 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 12/184 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L +C L G+ +H + D+ ++ L++MY KC A +F +
Sbjct: 13 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 72
Query: 191 KRNLSSWHLMISGYAANG--QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R+L +W+ M++GYA +G A +L QM+ P+ T + + A A+ +G
Sbjct: 73 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 132
Query: 249 FLYFEIM---------KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEV 299
+ + G+ A++ + G L+ A + MP V
Sbjct: 133 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV-T 191
Query: 300 WEAL 303
W AL
Sbjct: 192 WSAL 195
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 202/370 (54%), Gaps = 27/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--R 190
+L+ +C NL ++ G VH + + + + ++MY KC LA +VFD++
Sbjct: 371 ALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPEN 430
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+ + MI G+A +G G L L+ +M+ G PD TF+V AC+ V+EG
Sbjct: 431 DRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLE 490
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F+ MK +G+ P +EHY +I +LG AG L EAEE++ MP +P +W +L A+IH
Sbjct: 491 IFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIH 550
Query: 311 GDVELEDRAEELLGDLDPSK-----------AIVDKIPLPPR----------KKQSATNM 349
G++ + + A L +L+P A V ++ R K ++
Sbjct: 551 GNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSL 610
Query: 350 LEEKNRVSDY----RSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E K + ++ RS + Y K+ +N ++ E G+ T L D++EE KE L
Sbjct: 611 VEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLS 670
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSERLAIA+ LI++P + +RIIKNLR+CGDCH K++S RE+IVRD RFHHF+
Sbjct: 671 YHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFK 730
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 731 DGSCSCLDYW 740
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 130 VFSSLLDSC-GNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFD 187
F SL +C N G +H +L+ D + L+ Y K ++R +FD
Sbjct: 252 TFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFD 311
Query: 188 QLRKRNLSSWHLMISGYAANGQ-------------GADGLMLFEQMRKTGPHPDKETFLV 234
++ + +L++W+++++ YA + + L LF M+ G P++ T +
Sbjct: 312 RINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVA 371
Query: 235 VFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+ +AC++ AV +GF ++ +++N + + A + + G L A + ++MP
Sbjct: 372 LISACSNLGAVSQGFWVHCFVLRNKIKMNRFVG--TAFVDMYSKCGCLNLACQVFDKMP 428
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 205/374 (54%), Gaps = 33/374 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
SS+L +C +L +E+G+++H + + LI +YGKC N AR VFD L
Sbjct: 307 LSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLT 366
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++ + + MI YA NG G + L LFE+++ G P+ TF+ + AC +A V+EG
Sbjct: 367 ELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQ 426
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
F ++N++ I I+H+ +I +LG + L EA +E + P V +W L N +IH
Sbjct: 427 IFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIH 485
Query: 311 GDVELEDRAEELLGDLDPS------------------------KAIVDKIPLPPRKKQSA 346
G+VE+ ++ + +L P K+ + + L KK A
Sbjct: 486 GEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKL---KKSPA 542
Query: 347 TNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEK 402
+ ++ V + + DL +E + GL +++ GY P+TR+VL D+DEE K
Sbjct: 543 MSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKIS 602
Query: 403 ALQYHSERLAIAYGLISTPPR-MPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 461
+L YHSE+LAIAY L T R +RI KNLR+CGDCH+ IK +S + GR++I RD+KRF
Sbjct: 603 SLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRF 662
Query: 462 HHFRDGKCSCGDYW 475
HHF+ G CSC DYW
Sbjct: 663 HHFKGGLCSCKDYW 676
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
+ +SSL+ + KS+ + VH + S F L +KLI+ Y KC + ARK+FD+
Sbjct: 2 NFYSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDE 60
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
L R++ +W+ MIS + ++G+ + + + M G PD TF + A + ++ G
Sbjct: 61 LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHG 120
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+ +L +CGNL + G+ +H L+ S V L+ MY +C + KVF+QL
Sbjct: 206 LACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLD 265
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
N +W + G NG+ + +F +M + P+ T + AC+S ++ G
Sbjct: 266 YANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVG 323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAF-VKDVEL 165
GK +EA+E+ G D FS++ + L I G+R H L V D +
Sbjct: 80 GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFV 139
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP 225
+ L++MY K R A VF ++ ++++ + +I GYA +G + L +FE M G
Sbjct: 140 ASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGV 199
Query: 226 HPDKETFLVVFAACAS 241
P++ T + C +
Sbjct: 200 KPNEYTLACILINCGN 215
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 195/370 (52%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS L + L +E G+++H L F D + N +MY KC K+
Sbjct: 658 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 717
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+L SW+++IS +G + F +M + G P TF+ + AC+ V +G
Sbjct: 718 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 777
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y++++ D+G+ P IEH I +I +LG +G L EAE F+ +MP +P VW +L +IH
Sbjct: 778 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 837
Query: 311 GDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATNM 349
G+++ +A E L L+P V ++ KK+ A +
Sbjct: 838 GNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 897
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ K++VS + D + Y K++ + ++E+GYV DT L D DEE KE L
Sbjct: 898 VKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLW 957
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AY L+STP +RI KNLRIC DCH+ K +S+++GR +++RD RFHHF
Sbjct: 958 NHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFE 1017
Query: 466 DGKCSCGDYW 475
G CSC DYW
Sbjct: 1018 RGLCSCKDYW 1027
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 124 ASAGYDVFSSLLDSC---GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
S+ Y S+L +C G+L +E GK +H + ++ F D + N LI MY KC +
Sbjct: 549 VSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 606
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ +F+ L RN+ +W+ M++ A +G G + L L +MR G D+ +F +A A
Sbjct: 607 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 666
Query: 241 SAEAVKEG 248
++EG
Sbjct: 667 KLAVLEEG 674
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 78 GTGHSQNTNDPLRG--NAQLESLDVNLLSLCKEGKVREAIEYMGQDASA--SAGYDVFSS 133
G G S N + L S + + S +G+ +A+ + S+ S Y F+S
Sbjct: 398 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTS 457
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L +C E G+ +H L+ S + + N L+ MYGK +R+V Q+ +R+
Sbjct: 458 ALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD 517
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
+ +W+ +I GYA + L F+ MR G + T + V +AC
Sbjct: 518 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+LL G++ + G+ +H L+ F V + N L+ MY + A VF Q+
Sbjct: 355 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 414
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE-------- 243
++L SW+ +++ + +G+ D L L M +G + TF AAC + +
Sbjct: 415 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 474
Query: 244 ---AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
V G Y +I+ N A++ + G G + E+ + +MP V W
Sbjct: 475 HGLVVVSGLFYNQIIGN------------ALVSMYGKIGEMSESRRVLLQMPRRDVV-AW 521
Query: 301 EALRNFAQIHGDVELED 317
AL I G E ED
Sbjct: 522 NAL-----IGGYAEDED 533
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 3/158 (1%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ VH L V N LI MY K + AR +FD + RN SW+ M+SG
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGFLYFEIMKNDYGIVPGI 265
G +G+ F +M G P + AC S +EG + G++ +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDV 209
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
AI+ + G G + + + E MP + V W +L
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSL 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G+++ + S + + N LI M G N A +FDQ+ +R+ SW+ + + YA
Sbjct: 268 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 327
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVP-- 263
NG + +F MR+ + T + + + K G + +G+V
Sbjct: 328 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG-------RGIHGLVVKM 380
Query: 264 GIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G + + + +++ AG +EA ++MP + + W +L
Sbjct: 381 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSL 423
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 130 VFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
V +SL+ +CG S+ G +VH + S + DV ++ ++ +YG +RKVF++
Sbjct: 175 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 234
Query: 189 LRKRNLSSWHLMISGYAANGQ 209
+ RN+ SW ++ GY+ G+
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGE 255
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 195/370 (52%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS L + L +E G+++H L F D + N +MY KC K+
Sbjct: 568 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 627
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+L SW+++IS +G + F +M + G P TF+ + AC+ V +G
Sbjct: 628 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 687
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y++++ D+G+ P IEH I +I +LG +G L EAE F+ +MP +P VW +L +IH
Sbjct: 688 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 747
Query: 311 GDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATNM 349
G+++ +A E L L+P V ++ KK+ A +
Sbjct: 748 GNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 807
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ K++VS + D + Y K++ + ++E+GYV DT L D DEE KE L
Sbjct: 808 VKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLW 867
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AY L+STP +RI KNLRIC DCH+ K +S+++GR +++RD RFHHF
Sbjct: 868 NHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFE 927
Query: 466 DGKCSCGDYW 475
G CSC DYW
Sbjct: 928 RGLCSCKDYW 937
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 124 ASAGYDVFSSLLDSC---GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
S+ Y S+L +C G+L +E GK +H + ++ F D + N LI MY KC +
Sbjct: 459 VSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ +F+ L RN+ +W+ M++ A +G G + L L +MR G D+ +F +A A
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 241 SAEAVKEG 248
++EG
Sbjct: 577 KLAVLEEG 584
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 77 TGTGHSQNTNDPLRG--NAQLESLDVNLLSLCKEGKVREAIEYMGQDASA--SAGYDVFS 132
G G S N + L S + + S +G+ +A+ + S+ S Y F+
Sbjct: 307 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C E G+ +H L+ S + + N L+ MYGK +R+V Q+ +R
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
++ +W+ +I GYA + L F+ MR G + T + V +AC
Sbjct: 427 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 130 VFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
V +SL+ +CG S+ G +VH + S + DV ++ ++ +YG +RKVF++
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ RN+ SW ++ GY+ G+ + + +++ MR G ++ + +V ++C +K+
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG---LLKDE 176
Query: 249 FLYFEIMKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
L +I+ + G+E +A+ I +LGS G++ A ++M T+ W ++
Sbjct: 177 SLGRQIIGQV--VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIA 233
Query: 305 NFAQIHGDVELEDRAEELL 323
+G +E R L+
Sbjct: 234 AAYAQNGHIEESFRIFSLM 252
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+LL G++ + G+ +H L+ F V + N L+ MY + A VF Q+
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAE-------- 243
++L SW+ +++ + +G+ D L L M +G + TF AAC + +
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 244 ---AVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
V G Y +I+ N A++ + G G + E+ + +MP V W
Sbjct: 385 HGLVVVSGLFYNQIIGN------------ALVSMYGKIGEMSESRRVLLQMPRRDVV-AW 431
Query: 301 EALRNFAQIHGDVELED 317
AL I G E ED
Sbjct: 432 NAL-----IGGYAEDED 443
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S ++ SCG LK +G+++ + S + + N LI M G N A +FDQ+ +
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 223
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+ SW+ + + YA NG + +F MR+ + T + + + K G
Sbjct: 224 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG--- 280
Query: 252 FEIMKNDYGIVP--GIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +G+V G + + + +++ AG +EA ++MP + + W +L
Sbjct: 281 ----RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSL 333
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKET 231
MY K + AR +FD + RN SW+ M+SG G +G+ F +M G P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 232 FLVVFAACA-SAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVER 290
+ AC S +EG + G++ + AI+ + G G + + + E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 291 MPFEPTVEVWEAL 303
MP + V W +L
Sbjct: 120 MP-DRNVVSWTSL 131
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 198/370 (53%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ LL++C + ++ G +H + F V + N LI MY K + + VF +
Sbjct: 325 FAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMI 384
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ MI GY+ +G G L +F+ M P+ TF+ V +A + VKEGF
Sbjct: 385 YRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFY 444
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y + ++ I PG+EHY ++ +L AG L EAE F++ + V W L N +H
Sbjct: 445 YLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVH 504
Query: 311 GDVELEDRAEELLGDLDP----SKAIVDKIPLPPR-----------------KKQSATNM 349
+ +L R E + +DP + ++ + R KK+ +
Sbjct: 505 RNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASW 564
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
L+ +N + + S E Y+K++ L ++ GYVP+ VLHD+++E KE L
Sbjct: 565 LDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLS 624
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYGL+ P P+RIIKNLR+C DCH A+K++SK+ R +IVRD RFHHFR
Sbjct: 625 YHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFR 684
Query: 466 DGKCSCGDYW 475
DG C+C D+W
Sbjct: 685 DGSCTCLDHW 694
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 3 SLVSIQQHAANSMIISSNFNS-----KISHSISAHSVTLKSSSPVKLLCAYATPNPKVYR 57
++VS+Q N + ++ ++ ++ + H + K L+C + V+
Sbjct: 106 NMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFK----FGLVCHQYVKSALVHM 161
Query: 58 NTRFVKKQRNPSSNEQEPKTGTGHSQNTNDPLRGNAQLESLDVNLLSLCKEGKVREAIEY 117
+R + + P ++ ND N+ L +L + G+ EA+E
Sbjct: 162 YSRCSHVELALQVLDTVP------GEHVNDIFSYNSVLNAL-------VESGRGEEAVEV 208
Query: 118 MGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGK 175
+ + +D + ++ C ++ +++G RVH L + D + + LI+MYGK
Sbjct: 209 LRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGK 268
Query: 176 CCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVV 235
C AR VFD L+ RN+ W +++ Y NG + L LF M + G P++ TF V+
Sbjct: 269 CGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVL 328
Query: 236 FAACASAEAVKEG 248
ACA A++ G
Sbjct: 329 LNACAGIAALRHG 341
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 138 CGNLKSIEMGKRVHE--LLRT-SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
C ++K + GK +H L+R ++ + N L+ +Y KC LAR +FD + RN+
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKT-GPHPDKETFLVVFAACASAEAVKEGFLYFE 253
SW+++++GY G + L+LF+ M P++ F +AC+ VKEG
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 254 IMKNDYGIVPGIEHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
++ +G+V Y+ A++ + H+ A + ++ +P E +++
Sbjct: 142 LLFK-FGLV--CHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIF 187
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
VF++ L +C + ++ G + H LL V + + L+ MY +C + LA +V D +
Sbjct: 119 VFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTV 178
Query: 190 ---RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK 246
++ S++ +++ +G+G + + + +M D T++ V CA ++
Sbjct: 179 PGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQ 238
Query: 247 EGF-LYFEIMKNDYGIVPGIEHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
G ++ +++ G++ + ++ +I + G G ++ A + + V VW AL
Sbjct: 239 LGLRVHARLLRG--GLM--FDEFVGSMLIDMYGKCGEVLNARNVFDGLQ-NRNVVVWTAL 293
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 202/370 (54%), Gaps = 29/370 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SL+ +C +L +++ G+ H + + + N LI+MY KC L+R+VF+ + R
Sbjct: 446 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 505
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ MI+GY +G G + LF +M G PD TF+ + +AC+ + V EG +F
Sbjct: 506 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 565
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+M + YG+ P +EHYI ++ +L G L EA EF++ MP V VW AL +++ +
Sbjct: 566 HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 625
Query: 313 VELEDRAEELLGDLDPSKA-----------------------IVDKIPLPPRKKQSATNM 349
++L + ++ +L P I+ K+ KK +
Sbjct: 626 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV--QGFKKSPGCSW 683
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E + + D + Y ++ + +++ GY PDT +VL D++EE KEKAL
Sbjct: 684 IEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALI 743
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSE+LAIAYG++S + + KNLR+CGDCH IK +S + R +IVRD RFHHF+
Sbjct: 744 CHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFK 803
Query: 466 DGKCSCGDYW 475
+G+CSCGD+W
Sbjct: 804 NGQCSCGDFW 813
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S L +C +L + MG+++H LL S D+ N L+ MY K A +FD++
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
++ S+ ++SGY NG+ + ++F++M+ PD T + + AC+ A++ G
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG-- 460
Query: 251 YFEIMKNDYG--IVPGI--EHYI--AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ +G I+ G+ E I A+I + G + + + MP V W +
Sbjct: 461 -----RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMI 514
Query: 305 NFAQIHG 311
IHG
Sbjct: 515 AGYGIHG 521
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L +C L G+ +H + D+ ++ L++MY KC A +F +
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 190 RKRNLSSWHLMISGYAANG--QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKE 247
R+L +W+ M++GYA +G A +L QM+ P+ T + + A A+ +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 248 GFLYFEIM---------KNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVE 298
G + + G+ A++ + G L+ A + MP V
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV- 305
Query: 299 VWEAL 303
W AL
Sbjct: 306 TWSAL 310
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 157 SAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLML 216
S V L L++MY KC + AR+VFD + RN +W +I G+ + +L
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326
Query: 217 FEQMRKTGPHPDKETFLV-VFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
F+ M G T + ACAS + ++ G ++ G+ + +++ +
Sbjct: 327 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMY 385
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
AG + +A + M + TV + + Q RAEE
Sbjct: 386 AKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ-------NGRAEE 424
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 198/370 (53%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ L+S L ++ G +H L+ S + V + N L+ MY K + ARK F +
Sbjct: 341 FAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ MI G++ +G G +GL F++M G P++ TF+ V AC+ V++G
Sbjct: 401 FRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLY 460
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF + + + P ++HY I+ +L AG +AE+F+ P E V W AL N +
Sbjct: 461 YFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVR 520
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
+ L + E P+ + ++ I R KK+ +
Sbjct: 521 RNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSW 580
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ +N+ + + + E Y K+K + ++R GY PD V HD+DEE +E L
Sbjct: 581 IGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLS 640
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYGL+ TP PL + KN+RIC DCH+AIK++SKI R +++RD+ RFHHFR
Sbjct: 641 YHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFR 700
Query: 466 DGKCSCGDYW 475
DG+CSC DYW
Sbjct: 701 DGQCSCCDYW 710
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVH-ELLRT--SAFVKDVELNNKLIEMYGKCCNTRLARKV 185
D + LL C N + G+ +H L+ T S+ KDV N LI +Y KC T ARKV
Sbjct: 32 DRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKV 91
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEA 244
FD + +RN+ SW M+ GY +G + L LF+ M + P++ VVF +C+S+
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGR 151
Query: 245 VKEG 248
++EG
Sbjct: 152 IEEG 155
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +E E + + A D + S L C NL+ + + +++H + F +VE +
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEAS 275
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
+I MYGKC A++VFD +N+ ++ Y + + L LF +M
Sbjct: 276 GAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYI---AIIKVLGSAGHLI 282
P++ TF + + A +K G L+ ++K+ Y H + A++ + +G +
Sbjct: 336 PNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYR-----NHVMVGNALVNMYAKSGSIE 390
Query: 283 EAEEFVERMPFEPTVEVWEAL 303
+A + M F V W +
Sbjct: 391 DARKAFSGMTFRDIV-TWNTM 410
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 1/156 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V + + SC + IE GK+ H S + + N L+ MY C A +V D L
Sbjct: 138 VATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+LS + +SGY G +G + +M K D T+L C++ +
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLAR 257
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
M G +E AII + G G ++ A+
Sbjct: 258 QIHSRMVR-LGFNSEVEASGAIINMYGKCGKVLYAQ 292
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 201/371 (54%), Gaps = 26/371 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F L C +L + +GK +H L + ++++ N LIEMY KC + +VF+++
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W MI Y G+G L F M K+G PD F+ + AC+ + V EG
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
FE MK Y I P IEHY ++ +L + + +AEEF++ MP +P +W ++ +
Sbjct: 632 CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTS 691
Query: 311 GDVELEDRAEELLGDL---DPSKAIV-----------DKIPLPPRK-------KQSATNM 349
GD+E +R + +L DP +I+ DK+ L + K +
Sbjct: 692 GDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSW 751
Query: 350 LEEKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDI-DEEAKEKAL 404
+E V + S D Y+ ++ L M + GY+PD R V ++ +EE K + +
Sbjct: 752 IEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLI 811
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSERLAIA+GL++T P PL+++KNLR+CGDCH K++SKIVGRE++VRD RFH F
Sbjct: 812 CGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLF 871
Query: 465 RDGKCSCGDYW 475
+DG CSC D W
Sbjct: 872 KDGTCSCKDRW 882
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 104 SLCKEGKVREAIEYMGQ--DASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVK 161
+ K G EA+E+ G+ ++ S F S++ +C L EMG V+E + F
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
D+ + N L++MY + AR+VFD++ R+L SW+ +ISGY+++G + L ++ +++
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 222 KTGPHPDKETFLVVFAACASAEAVKEG 248
+ PD T V A + VK+G
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
L+ L ++ GK +H S D+ ++N LI+MY KC + K+F + +
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-LYF 252
+W+ +IS G A GL + QMRK+ PD TFLV CAS A + G ++
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+++ +G ++ A+I++ G L + ERM V W + ++G+
Sbjct: 534 CLLR--FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV-TWTGMIYAYGMYGE 590
Query: 313 VELEDRAEELLGDLDPSKAIVDKI 336
E +A E D++ S + D +
Sbjct: 591 GE---KALETFADMEKSGIVPDSV 611
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +CG+L+ + + K ++ + + FV + + N LI++Y KC + AR VF+ +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ SW+ +ISGY +G + + LF+ M D T+L++ + +K G
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 6/184 (3%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR- 190
S L S NL + +R+H L+ + + KLI+ Y + VF ++
Sbjct: 11 SRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+N+ W+ +I ++ NG + L + ++R++ PDK TF V ACA + G L
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+E + D G + A++ + G L A + + MP V W +L + H
Sbjct: 128 VYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSH 185
Query: 311 GDVE 314
G E
Sbjct: 186 GYYE 189
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L + GNL ++ G+ +H S V +NN L+ MY K AR+VFD++
Sbjct: 211 SSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV 270
Query: 192 RNLSSWHLMISGYAANGQGADGL-MLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-F 249
R+ S++ MI GY + + M E + + PD T V AC + +
Sbjct: 271 RDSVSYNTMICGYLKLEMVEESVRMFLENLDQF--KPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+Y ++K + + + + +I V G +I A + M + TV W ++ I
Sbjct: 329 IYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECKDTVS-WNSI-----I 380
Query: 310 HGDVELEDRAEEL 322
G ++ D E +
Sbjct: 381 SGYIQSGDLMEAM 393
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 208/369 (56%), Gaps = 24/369 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S L+SC L +++ GK +H + D + N L+ MY N A VF ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K+++ SW+ +I G A +G+G ++F QM + PD+ TF + +AC+ +++G
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 251 YFEIMKNDYG-IVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F M + I I+HY ++ +LG G L EAEE +ERM +P VW AL + ++
Sbjct: 449 LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRM 508
Query: 310 HGDVELEDRAEELLGDLDPSKAI-----------------VDKIPLPPRK----KQSATN 348
H DV+ ++A + +LD + V K+ + +K K+ ++
Sbjct: 509 HSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSS 568
Query: 349 MLEEKNRVSDYRSTDLYRGE--YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQY 406
+ + + ++ S D YEK++ L +++E GY PD R LHD+++E KE+ L Y
Sbjct: 569 WVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWY 628
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSERLAIA+GLI+T + ++KNLR+C DCH IK++S +VGRE+++RD RFHHF++
Sbjct: 629 HSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKN 688
Query: 467 GKCSCGDYW 475
G CSCGDYW
Sbjct: 689 GTCSCGDYW 697
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ ++ +C N + MG +VH L+ F+ + ++ LI Y C +RKVFD+
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
++ W ++SGY+ N + D L +F M + P++ TF +C++ + G
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG 345
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
VKD N ++ Y + A K+F Q+ +N+ SW MI G N + + L LF+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 220 MRKTGPHPDKETFLVVFAACASAEA-----------VKEGFLYFE 253
M + F V ACA+A A +K GFLY E
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 158 AFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLM 215
+F VE N+ + + + R+ AR+VF+Q+ ++S + MI+GY + + D L
Sbjct: 28 SFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALN 87
Query: 216 LFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVL 275
LF++M P D ++ + + C + F+ M + + A++
Sbjct: 88 LFDEM----PVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE-----RSVVSWTAMVNGC 138
Query: 276 GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDK 335
+G + +AE +MP + T W ++ +HG ++ G +D + + +
Sbjct: 139 FRSGKVDQAERLFYQMPVKDTA-AWNSM-----VHGYLQ--------FGKVDDALKLFKQ 184
Query: 336 IP 337
+P
Sbjct: 185 MP 186
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 208/380 (54%), Gaps = 28/380 (7%)
Query: 109 GKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
GK EA+ + S D F+ SLL +C + ++ +GKRVH + +++ +
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT-GP 225
N L+++Y +C A+ +FD++ +N SW +I G A NG G + + LF+ M T G
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 226 HPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P + TF+ + AC+ VKEGF YF M+ +Y I P IEH+ ++ +L AG + +A
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS---------------- 329
E+++ MP +P V +W L +HGD +L + A + L+P+
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Query: 330 -----KAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMR 380
+ I ++ KK +++E NRV ++ D + Y K+K + G++R
Sbjct: 441 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Query: 381 EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHN 440
GYVP V D++EE KE A+ YHSE++AIA+ LISTP R P+ ++KNLR+C DCH
Sbjct: 501 SEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 560
Query: 441 AIKIMSKIVGRELIVRDNKR 460
AIK++SK+ RE++VRD R
Sbjct: 561 AIKLVSKVYNREIVVRDRSR 580
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 108/219 (49%), Gaps = 14/219 (6%)
Query: 86 NDPLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIE 145
N +RG A++ + ++ SL +E +V +E + L+ + + +
Sbjct: 89 NTLIRGYAEIGN-SISAFSLYREMRVSGLVE---------PDTHTYPFLIKAVTTMADVR 138
Query: 146 MGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYA 205
+G+ +H ++ S F + + N L+ +Y C + A KVFD++ +++L +W+ +I+G+A
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPG 264
NG+ + L L+ +M G PD T + + +ACA A+ G ++ ++K G+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRN 256
Query: 265 IEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ ++ + G + EA+ + M + +V W +L
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSL 294
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 134 LLDSCGNL------KSIEMGKRVHEL-LRTSAFVKDVELNNKLIEMYGKCCN---TRLAR 183
+++ C NL SI +++H +R + D EL LI + A
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 184 KVFDQLRKR-NLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACAS 241
KVF ++ K N+ W+ +I GYA G L+ +MR +G PD T+ + A +
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 242 AEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVW 300
V+ G ++ ++++ +G + +++ +++ + + G + A + ++MP E + W
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQN--SLLHLYANCGDVASAYKVFDKMP-EKDLVAW 190
Query: 301 EALRN-FAQ 308
++ N FA+
Sbjct: 191 NSVINGFAE 199
>gi|356544972|ref|XP_003540920.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Glycine max]
Length = 622
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 205/370 (55%), Gaps = 26/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S +L S ++ +E GK + L V + N L+ MY K R K FD+L
Sbjct: 254 YSGILSSYLSMGCLEQGKWLLAHLMKPGQKLVVYVGNTLLHMYAKLGKIRDVEKFFDKLV 313
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
K ++ S + M++ YA +G G + + FE+M G P+ T L V ++C+ A + EG
Sbjct: 314 KVDVVSCNSMLTRYAQHGLGKEAMQQFEEMISFGIEPNDITVLFVLSSCSHARLLDEGKH 373
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF +M+ Y I P + HY II +LG AG L +AE F+E MP EP V + AL +++H
Sbjct: 374 YFGLMRK-YSIEPKVSHYATIIDLLGXAGLLDQAESFIEEMPIEPIVAIXGALLGDSKMH 432
Query: 311 GDVELEDRAEELLGDLDPS---------------------KAIVDKIPLPPRKKQSATNM 349
+ ++ A + + +L+PS ++ + KK+ +
Sbjct: 433 KNTKMGAYAAQQVFELNPSCRGTHTLLVNMYASAGRWGDVAKVIKIMKDSGVKKEPTCSX 492
Query: 350 LEEKNRVSDYRSTDLYRGEYEKM----KGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E +N V + + D + EK+ + LN +++E GYVPDT +VL +D++ KE Q
Sbjct: 493 VEIENSVHVFVANDAAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNFQ 552
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YH+E+LA+ ++TPPR RI+KN+R+ GDCH++I ++ +V RE+IVRD RFHHFR
Sbjct: 553 YHTEKLALTLAFLNTPPRSTTRIMKNIRVSGDCHSSINYVALVVKREIIVRDTNRFHHFR 612
Query: 466 DGKCSCGDYW 475
DG CSCGDYW
Sbjct: 613 DGFCSCGDYW 622
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++++LL C L ++ GK VH + S F D+ + N ++ MY +C N + + VF++
Sbjct: 66 LYNTLLKRCTQLGKLKEGKLVHFHMFNSKFKDDLVIQNFVLFMYARCGNLKDTQHVFNEK 125
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++++ +W MISGYA N + D L+LF ++ G
Sbjct: 126 LQKDMVTWTSMISGYAQNERAKDTLVLFPRILSEG 160
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 4/194 (2%)
Query: 119 GQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCN 178
Q+ A +F +L L + +H +V + + L+ M +C
Sbjct: 141 AQNERAKDTLVLFPRILSEGTKLNXFILSSLIHASCWMYGCHSNVFVGSSLVNMXARCGY 200
Query: 179 TRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAA 238
VFD +N SW+ +I GYA G+G + L L+ +M+ P + T+ + ++
Sbjct: 201 LGEEXLVFDNSWCKNEVSWNALIGGYAKKGEGEEALALYLRMQMEAYKPIQFTYSGILSS 260
Query: 239 CASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
S +++G +L +MK +V + + ++ + G + + E+F +++ V
Sbjct: 261 YLSMGCLEQGKWLLAHLMKPGQKLVVYVGN--TLLHMYAKLGKIRDVEKFFDKLVKVDVV 318
Query: 298 EVWEALRNFAQIHG 311
L +AQ HG
Sbjct: 319 SCNSMLTRYAQ-HG 331
>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 561
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 203/368 (55%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C ++ G+ +H FV D+ + LI+MY + ++A VF++++++
Sbjct: 194 SLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEK 253
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
L W+ M+ GYA + G + ++L+++MR+ PD TF + +AC ++ V EG+ YF
Sbjct: 254 TLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYF 313
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ DY IVP IEHY ++ +LG +G L EA F+E MP +P +W AL +IH +
Sbjct: 314 DSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKN 373
Query: 313 VELEDRAEELLGDLDPSKAI-----------VDKIPLPPRKKQSATNMLEEKNRVSDY-- 359
++L + A L ++P+ + +++ R K S T + + V +
Sbjct: 374 IKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERLKHSMTVLAMKIPPVWSWTQ 433
Query: 360 --RSTDLYRGE----------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
+S ++ E Y ++ L ++R+ GY PD V +ID+ KEK L H
Sbjct: 434 VNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAPDLNCVCQNIDDNEKEKILMSH 493
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
+E+LA+ YG++ P+RI+KN RIC DCH K +S + RE+++RD RFHHF++G
Sbjct: 494 TEKLAMVYGVMKMKGGSPIRIVKNTRICFDCHTVAKYISLVRKREILLRDGGRFHHFKNG 553
Query: 468 KCSCGDYW 475
KC+C D W
Sbjct: 554 KCACNDRW 561
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+S L + L ++GK +H + S DV + L++MY K A+ V + +
Sbjct: 22 TSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKN 81
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+N+ +W+ +ISGY+ GQ + + L QM + G PD T+ + + + + E
Sbjct: 82 KNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTI 141
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFE 294
+K+ GI P + + A+I ++A + +M E
Sbjct: 142 INRIKSS-GITPNVVSWTALISGCSQNEKYMDALKIFSQMQAE 183
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG-FLY 251
N+ SW +ISG + N + D L +F QM+ P+ T + ACA +K+G L+
Sbjct: 153 NVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELH 212
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
MK G V I A+I + AG L A ++ E T+ W + IH
Sbjct: 213 CFSMK--LGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQ-EKTLPCWNCMMMGYAIHS 269
Query: 312 DVE 314
E
Sbjct: 270 HGE 272
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 198/370 (53%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ LL+S L ++ G +H L+ S + V + N L+ MY K + ARK F +
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W+ MISG + +G G + L F++M TG P++ TF+ V AC+ V++G
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF + + + P I+HY I+ +L AG +AE+F+ P E V W L N +
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPR-----------------KKQSATNM 349
+ L + E + P+ + ++ I R KK+ +
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+ +N+ + + D E Y K+K + +++ GY PD HD+DEE +E L
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLS 640
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AYGLI TP + PL + KN+RIC DCH+AIK++SKI R +++RD+ RFHHF
Sbjct: 641 YHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFL 700
Query: 466 DGKCSCGDYW 475
DG+CSC DYW
Sbjct: 701 DGQCSCCDYW 710
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELL---RTSAFVKDVELNNKLIEMYGKCCNTRLARKV 185
D + LL C N + +G+ +H L S+ +D N LI +Y KC T ARK+
Sbjct: 32 DRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKL 91
Query: 186 FDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG-PHPDKETFLVVFAACASAEA 244
FD + +RN+ SW M+ GY +G + L LF+ M +G P++ VVF +C+++
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 245 VKEG 248
++EG
Sbjct: 152 IEEG 155
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 109 GKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELN 166
G +E ++ + + A+ ++ + S L NL+ + + +VH + F +VE
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
LI MYGKC A++VFD +N+ ++ Y + + L LF +M
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDY--GIVPGIEHYIAIIKVLGSAGHLIE 283
P++ TF ++ + A +K+G L+ ++K+ Y ++ G A++ + +G + +
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG----NALVNMYAKSGSIED 391
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHG 311
A + M F V W + + HG
Sbjct: 392 ARKAFSGMTFRDIV-TWNTMISGCSHHG 418
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
V + + SC N IE GK+ H + + N L+ MY C A +V D L
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
+LS + +SGY G +GL + +RKT
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGL---DVLRKTA 229
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 203/375 (54%), Gaps = 35/375 (9%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L CG L EMGK++H S F+ D+ + N +I MY KC N A KVF+ +
Sbjct: 512 TAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA 571
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC--ASAEAVKEGF 249
++ SW+ +I+G+ + QG + L ++ +M K G PD TF+++ +A ++ V
Sbjct: 572 HDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCR 631
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F MK Y I P +EHY +++ VLG G L EAEE + +MP EP VW AL + +I
Sbjct: 632 RLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRI 691
Query: 310 HGDVELEDRAEELL---GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR------ 360
H + + RA + L LDPS I+ + ++M+ E+ RV +R
Sbjct: 692 HSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRS 751
Query: 361 --------------------STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ D++ G ++ L + +AGYVPDT +VLH+++E K
Sbjct: 752 WIIHENKVHSFYARDKSHPQAKDIHSG----LELLIMECLKAGYVPDTSFVLHEVEEHQK 807
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
+ L YHS ++A YGL+ T P P+RI+KN+ +CGDCH +K +S + GRE+ +RD
Sbjct: 808 KDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASG 867
Query: 461 FHHFRDGKCSCGDYW 475
H F +G+CSC DYW
Sbjct: 868 HHCFLNGQCSCKDYW 882
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K + R+A+E + S+ + FS ++L C L +E+G ++H ++ F+
Sbjct: 148 KSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTF 207
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N L+ +YGKC ++FD++ R+++SW+ +IS LF MR+
Sbjct: 208 VSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRID 267
Query: 225 ----PHPDKETFLVVFAACAS-------AEAVKEGF 249
H T LV AS A +K GF
Sbjct: 268 GFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGF 303
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 25/170 (14%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LLD +E+ K VH + A +D+ L N LI Y K A KVF L N
Sbjct: 78 LLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 135
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-----------SA 242
+ S+ MISG+A + + + +F +MR +G ++ +F+ + C A
Sbjct: 136 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHA 195
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+K GFL + + N A++ + G G+L + + MP
Sbjct: 196 IVIKMGFLNYTFVSN------------ALMGLYGKCGYLDSVLQLFDEMP 233
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG++K + + E +R V+DV ++I Y + T LA +VFD++ RN S+
Sbjct: 320 CGSIKHV---VALFEKMR----VRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISY 372
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----EGFLYF 252
+ ++SG+ NG+G+ L F +M + G T V AC K GF
Sbjct: 373 NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGF--- 429
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
I+K +G IE A++ + G + +A++
Sbjct: 430 -ILKFGFGSNACIE--AALLDMCTRCGRMADAQK 460
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELL 154
S + L C+ G+ +A+ + + F+ +L++CG L ++ K++H +
Sbjct: 371 SYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFI 430
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS--WHLMISGYAANGQGAD 212
F + + L++M +C A+K+F Q S W MI GYA N Q +
Sbjct: 431 LKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEE 490
Query: 213 GLMLFEQMRKTGPH-PDKETFLVVFAACAS-----------AEAVKEGFL 250
+ LF Q + G DK V C + A+K GFL
Sbjct: 491 AISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFL 540
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 205/379 (54%), Gaps = 46/379 (12%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
SLL +C N M + +H ++ T +++ + L+ +Y K +RKVF+++ K
Sbjct: 255 SLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKP 314
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQM-RKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ +W M++GYA +G G + + FE++ R+ G PD TF + +AC+ + VKEG +
Sbjct: 315 DKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYF 374
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
F +M + Y + P ++HY ++ +LG G L +A E ++ MPFEP VW AL ++H
Sbjct: 375 FRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHR 434
Query: 312 DVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNM---------------------- 349
+++L A + L LDPS PR +NM
Sbjct: 435 NIDLGKEAAKNLIALDPSD---------PRNYIMLSNMYSAAGLWNDASKVRTLMKNKVL 485
Query: 350 --------LEEKNR-----VSDYRSTDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDID 396
+E N+ V DY D +R ++K++ + ++++ G+V +T +LHD+D
Sbjct: 486 TRNQGCSFIEHGNKIHRFVVDDYTHPDSHR-IHKKLEEVMKKIQDVGFVHETESILHDVD 544
Query: 397 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 456
EE K + HSE++A+AYGL+ T MPL IIKNLRIC DCHN +K +S + R +I+R
Sbjct: 545 EEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTIIIR 604
Query: 457 DNKRFHHFRDGKCSCGDYW 475
D KRFH F G CSCGDYW
Sbjct: 605 DTKRFHQFSGGLCSCGDYW 623
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 121 DASASAGYDVF-SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNT 179
+A ++ +D F S+L+ + S+ + + +H + S +D + ++L+ Y K T
Sbjct: 37 NAISTHHFDPFLSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPT 96
Query: 180 RLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKE-TFLVVFAA 238
+ A +FD++ K++ SW+ ++SG A GQ + L +F +M+ E TFL V +A
Sbjct: 97 KDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISA 156
Query: 239 CASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP-FEPTV 297
C S +A EG+ Y G+V ++ A++ + G G + A MP E ++
Sbjct: 157 CVSEKACDEGY-YVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSI 215
Query: 298 EVWEAL 303
W ++
Sbjct: 216 VSWNSI 221
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 16/232 (6%)
Query: 88 PLRGNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFSSLLDSCGNLKSIEMG 147
P + SL L + + G+ M D+ F S++ +C + K+ + G
Sbjct: 107 PKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEG 166
Query: 148 KRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL--RKRNLSSWHLMISGYA 205
VH V +V++ N L+ MYGK A ++F ++ ++++ SW+ +++ A
Sbjct: 167 YYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCA 226
Query: 206 ANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIV--P 263
NG + F+ MR G PD T + + AC E F +++ +G++
Sbjct: 227 QNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQAC-------ENFPLGRMVEVLHGVIFTC 279
Query: 264 GIEHYIAIIKVL----GSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
G++ + I+ L G L + + E + +P W A+ +HG
Sbjct: 280 GLDENLTIVTTLLNLYSKLGRLNNSRKVFEEIS-KPDKVAWTAMLAGYAMHG 330
>gi|302806445|ref|XP_002984972.1| hypothetical protein SELMODRAFT_121321 [Selaginella moellendorffii]
gi|300147182|gb|EFJ13847.1| hypothetical protein SELMODRAFT_121321 [Selaginella moellendorffii]
Length = 379
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 197/372 (52%), Gaps = 25/372 (6%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
D L+ +C + + +R+H + S + + ++L+ MYGKC + AR++FD
Sbjct: 8 DAIVDLVRACARSRHLGEARRIHAQILASPHRGNKLMLDQLVMMYGKCGSVEDAREMFDS 67
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ +RN SW+ +++ YA G + + +F +M G PD+ F+ V AC+ A ++
Sbjct: 68 MAERNEVSWNALLAAYAQRGDVEEVVEVFWRMIVEGVSPDEVAFVTVLTACSHAGLLETS 127
Query: 249 FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQ 308
+ F M+ D+G+ P +HY+ +I VLG +G L AEE + MPF P W L +
Sbjct: 128 WELFVSMRGDHGLRPLSQHYLCMIDVLGRSGLLSSAEELIATMPFIPDEVAWGMLLAACK 187
Query: 309 IHGDVELEDRAEE---------------------LLGDLDPSKAIVDKIPLPPRKKQSAT 347
+H DV R + G + + A+ K+ KQ
Sbjct: 188 VHKDVSRAARIARDAVAADPEDCSSYTLLRNMLGIAGRTEDAAAVRKKMVSSGLSKQPGI 247
Query: 348 NMLEEKNRVSDYRSTDLYRGEYEKMKG----LNGQMREAGYVPDTRYVLHDIDEEAKEKA 403
+++ + + + S D +++ L QMRE+GYVPDT V H + E K +
Sbjct: 248 SLIIVNSEMHSFTSGDESHPRIHEIRAELQRLTSQMRESGYVPDTHDVFHAVSEAGKSEL 307
Query: 404 LQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 463
+ +HSE+LAIA+GLIST P +PL I KNLR+C DCH+A K +SK+ GR ++VRD+ RFH
Sbjct: 308 VWHHSEKLAIAFGLISTSPGVPLWIRKNLRVCLDCHSATKFISKVTGRSIVVRDSYRFHK 367
Query: 464 FRDGKCSCGDYW 475
F +G CSCGD+W
Sbjct: 368 FENGSCSCGDFW 379
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 202/369 (54%), Gaps = 26/369 (7%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S L +C L ++++G+ +H ++ + L LI+MY K + A +VF + +
Sbjct: 482 STLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK 541
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W MI+G A +G+G + LF M++T P+ TF + AC+ + V EG F
Sbjct: 542 DVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLF 601
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ YG+VP +HY ++ VLG AGHL EA +F+E MP P+ VW AL IHG+
Sbjct: 602 DEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGN 661
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+EL ++A L GD + + ++ KK++ + +E
Sbjct: 662 LELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIE 721
Query: 352 EKNRVSDYRSTD----LYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEE-AKEKALQY 406
V ++ D L R Y K+ + ++R GYV +T +L ++EE KEKAL+
Sbjct: 722 IDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKL 781
Query: 407 HSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 466
HSE++AIA+GLI + +RI+KNLR+C DCH K++SK+ GR++++RD RFHHF
Sbjct: 782 HSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSG 841
Query: 467 GKCSCGDYW 475
G CSC DYW
Sbjct: 842 GHCSCQDYW 850
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F L+ + + +GK VH + ++F DV + N LI Y C + LA VF+ +
Sbjct: 242 TFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMI 301
Query: 190 RKRN--LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
N + SW+ M++G+ G L LFE+MR G HP+ T + V +ACA
Sbjct: 302 EGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACA 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 33/149 (22%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C ++ +G++V + + + + ++ + N I+M+ KC +AR +FD + KR
Sbjct: 348 SVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKR 407
Query: 193 NLSSW-------------------------------HLMISGYAANGQGADGLMLFE--Q 219
++ SW +++ISGY +G+ + L +F Q
Sbjct: 408 DVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQ 467
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ K+G PD+ T L +ACA A+ G
Sbjct: 468 LTKSGARPDQVTLLSTLSACAQLGAMDIG 496
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 122 ASASAGYDVFSSLLDSCGNLKSIEMGKRVH-ELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
ASA+A +L C + K + K++H ++LRT+ + D ++L +
Sbjct: 133 ASATATNVGDRALFQQCTSFKQL---KQIHAQMLRTNK-LHDPYAASELFTAAAFSSFSA 188
Query: 181 L--ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH-PDKETFLVVFA 237
L ARKVFDQ+ + NL SW+++I A + +++F +M P P+K TF V+
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248
Query: 238 ACA 240
A A
Sbjct: 249 AVA 251
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 219/400 (54%), Gaps = 34/400 (8%)
Query: 107 KEGKVREAIEY---MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDV 163
+ G ++A+E M + Y S+L + L S+E+G+ +H S D
Sbjct: 244 QNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDD 303
Query: 164 ELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT 223
L + LI+MY KC A VF++L + N+ +W MI+G+A +GQ D + F +MR+
Sbjct: 304 VLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 363
Query: 224 GPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIE 283
G P ++ + AC+ A V+EG YF M + G+ P IEHY ++ +LG G L E
Sbjct: 364 GVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDE 423
Query: 284 AEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP--------------- 328
AEEF+ MP +P +W+AL ++H +VE+ R +L D+ P
Sbjct: 424 AEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 483
Query: 329 --SKAIVDKIPLPPR----KKQSATNMLEEKNRVSDYRSTDLYRGEYEKMKGLNG----- 377
+ + V ++ L + +K + ++ + ++ D + + K +N
Sbjct: 484 QGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVED---DSHPRAKEINSMLVEI 540
Query: 378 --QMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRIC 435
++R AGY P T VL +++EE KE AL YHSE++A A+GLIST P P+RI+KNLRIC
Sbjct: 541 SDKLRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRIC 600
Query: 436 GDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
DCH++IK++SK+ R++ VRD KRFHHF+DG CSC DYW
Sbjct: 601 EDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 162 DVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMR 221
+V L N +I+ Y + + + AR +FD++R+R++ SW+ MISGY+ NG D + +F +M+
Sbjct: 200 EVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMK 259
Query: 222 K-TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGH 280
K P+ T + V A + +++ G + + D GI A+I + G
Sbjct: 260 KGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 318
Query: 281 LIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ +A ER+P E + W A+ N IHG
Sbjct: 319 IEKAIMVFERLPRENVI-TWSAMINGFAIHG 348
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL-------ARK 184
SSL ++I ++H + S ++D +++ C + L A K
Sbjct: 17 SSLFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRF---CATSDLHHRDLDYAHK 73
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQ--GADGLMLF-EQMRKTGPHPDKETFLVVFAACAS 241
+F+Q+ +RN SW+ +I G++ + + + LF E M P++ TF V ACA
Sbjct: 74 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAK 133
Query: 242 AEAVKEG 248
+++G
Sbjct: 134 TGKIQQG 140
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 194/370 (52%), Gaps = 25/370 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FS L + L +E G+++H L F D + N +MY KC K+
Sbjct: 669 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSV 728
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R+L SW+++IS +G + F +M + G P TF+ + AC+ V +G
Sbjct: 729 NRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLA 788
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
Y++++ D+G+ P IEH I +I +LG +G L EAE F+ +MP +P VW +L +IH
Sbjct: 789 YYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 848
Query: 311 GDVELEDRAEELLGDLDPSKAIV---------------------DKIPLPPRKKQSATNM 349
D++ +A E L L+P V ++ KK+ A +
Sbjct: 849 RDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 908
Query: 350 LEEKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
++ K++VS + D + Y K++ + ++E+GYV DT L D DEE KE L
Sbjct: 909 VKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLW 968
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
HSERLA+AY L+STP +RI KNLRIC DCH+ K +S+++GR +++RD RFHHF
Sbjct: 969 NHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFE 1028
Query: 466 DGKCSCGDYW 475
G CSC DYW
Sbjct: 1029 SGLCSCKDYW 1038
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 125 SAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARK 184
S Y F+S L +C + + + G+ +H L+ S + + N L+ MYGK +R+
Sbjct: 460 SVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRR 519
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC 239
V Q+ +R++ +W+ +I GYA N L F+ +R G + T + V +AC
Sbjct: 520 VLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSAC 574
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 124 ASAGYDVFSSLLDSC---GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTR 180
SA Y S+L +C G+L +E GK +H + ++ F D + N LI MY KC +
Sbjct: 560 VSANYITVVSVLSACLVPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 617
Query: 181 LARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
++ +F+ L R++ +W+ +++ A +G G + L L +MR G D+ +F +A A
Sbjct: 618 SSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAA 677
Query: 241 SAEAVKEG 248
++EG
Sbjct: 678 KLAVLEEG 685
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S+LL G++ + G+ +H L+ F V + N L+ MY + A VF Q+
Sbjct: 366 STLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPT 425
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
++L SW+ +++ + +G+ D L + M +TG + TF AAC S E +G +
Sbjct: 426 KDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRIL 485
Query: 252 FEIMKNDYGIVPGI-EHYI---AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFA 307
++ +V G+ ++ I A++ + G G + + + +MP V W AL
Sbjct: 486 HGLV-----VVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVV-AWNAL---- 535
Query: 308 QIHGDVELED 317
I G E ED
Sbjct: 536 -IGGYAENED 544
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 130 VFSSLLDSCGNLKSI-EMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
V +SL+ +CG S+ G +VH + S + DV ++ ++ +YG +RKVF++
Sbjct: 161 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 220
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
+ RN+ SW ++ GY+ G+ + + +++ MR G ++ + +V ++C +K+
Sbjct: 221 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCG---LLKDE 277
Query: 249 FLYFEIMKNDYGIVPGIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
L +I+ I G+E +A+ I + G+ G++ A ++ T+ +
Sbjct: 278 SLGRQIIGQV--IKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335
Query: 305 NFAQIHGDVELEDRAEELL 323
+AQ +G +E R L+
Sbjct: 336 AYAQ-NGHIEESSRIFNLM 353
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S ++ SCG LK +G+++ + S + + N LI M+G N A +F+Q+ +
Sbjct: 265 SLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISE 324
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
R+ SW+ +++ YA NG + +F MR+ + T + + + K G
Sbjct: 325 RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWG--- 381
Query: 252 FEIMKNDYGIVP--GIEHYIAI----IKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +G+V G + + + +++ AG EA+ ++MP + + W +L
Sbjct: 382 ----RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLIS-WNSL 434
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 147 GKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAA 206
G+ +H L V N LI MY K + AR +FD++ RN SW+ M+SG
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 207 NGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-SAEAVKEGFLYFEIMKNDYGIVPGI 265
G +G+ F++M G P + AC S +EG + G++ +
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDV 195
Query: 266 EHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
AI+ + G G + + + E MP + V W +L
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSL 232
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 193/371 (52%), Gaps = 25/371 (6%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+++L +C ++ G R+H + + D + L++MY KC A VF +
Sbjct: 295 TIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM 354
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++ SW MI G+A +G+ + F QM +G PD+ FL V AC ++ V G
Sbjct: 355 NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGL 414
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
+F+ M+ DY I P ++HY+ ++ +LG AG L EA E VE MP P + W AL +
Sbjct: 415 NFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKA 474
Query: 310 HGDVELEDRAEELLGDLDP----SKAIVDK-------IPLPPRKKQSATNMLEEKNRVSD 358
H + + L +LDP S +DK I +++ S ++E++
Sbjct: 475 HKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWS 534
Query: 359 YRSTD-----LYRGEYE---------KMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKAL 404
Y D G+Y K+ + + GY P + +HDI+EE KE
Sbjct: 535 YIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVT 594
Query: 405 QYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 464
HSE+LA+ G + T P +RIIKNLRICGDCH+ +K +SKI R++++RD ++FHHF
Sbjct: 595 GIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHF 654
Query: 465 RDGKCSCGDYW 475
+DG+CSCGDYW
Sbjct: 655 KDGRCSCGDYW 665
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
+ LI+ Y A+++F+ + ++N+ SW +I+G++ G + + +M + G
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 227 PDKETFLVVFAACASAEAVKEGF-LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P++ T V +AC+ + A+ G ++ I+ N + I A++ + G L A
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIG--TALVDMYAKCGELDCAA 348
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHG 311
M + + W A+ +HG
Sbjct: 349 TVFSNMNHKDILS-WTAMIQGWAVHG 373
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 204/359 (56%), Gaps = 26/359 (7%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
S+ GK +H+ +R + ++ + N ++ MY K + LARK+F ++ ++ SW+ MIS
Sbjct: 521 SLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMIS 580
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY-GI 261
+A +G L F +M G P+ TF+ V +AC+ VK+G F + +D+ I
Sbjct: 581 AFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTI 640
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
P EHY ++ ++ AG L AE+F+ P +P + + +++H DVE ++ E
Sbjct: 641 SPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAE 700
Query: 322 LLGDLDPSKA--------IVDKIPLPPR-------------KKQSATNMLEEKNRVSDYR 360
L +L P ++ + D++ +K+ A + + K RV ++
Sbjct: 701 HLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFF 760
Query: 361 STDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG 416
+ D E+++ L+ +M +AGY PDT +LHD+ +E K++ L YHSE+LAIA+G
Sbjct: 761 TGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFG 820
Query: 417 LISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LIST P LRIIKNLR+CGDCH A K +SKI GRE++VRD+ RFHHF +G CSCGDYW
Sbjct: 821 LISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L C +++ G+ +H + S DV L+N +++MYG C +T A +VF ++
Sbjct: 407 FVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK 466
Query: 191 KRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ SW+ MI+ YAA + ++ L+LF+QM+ G PD +F+ +ACA+ ++ EG
Sbjct: 467 ARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK 526
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN-FAQ 308
L + ++ + G+ + A++ + +G L+ A + +MP P V W + + FAQ
Sbjct: 527 LLHDRIR-ETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQ 584
Query: 309 IHG 311
HG
Sbjct: 585 -HG 586
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L++C + +E G+ +H +R F + V N LI MYGKC + A +VF ++ R
Sbjct: 308 AVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHR 367
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ +I+ + + Q + L L M+ G DK +F+ CA++EA+ +G +
Sbjct: 368 DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIH 427
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + GI + AI+ + GS +A M V W A+
Sbjct: 428 SWIV-ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVS-WNAM 476
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L +C + + +E G+R+H +LR +A D ++ L+ MYGKC + ARKVFD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
R + + W+ MI+ YA + +F M G ++ TF+ V AC+
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACS 212
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ LLD + +S+++GK VH + SA + + + L+ MY C + A+ FD++
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC-ASAEAVKEGF 249
++ +W +I + G L LF M+ G P F+ V AC A E ++EG
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG- 119
Query: 250 LYFEIMKNDYGIVPGI----EHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +G++ G +HY++ ++ + G + +A + + + + VE W A+
Sbjct: 120 ------RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVE-WNAM 172
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 87/219 (39%), Gaps = 20/219 (9%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F +LD+C LK +E+ K V + R + D L+ YG C + A + F +
Sbjct: 204 FIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSR 263
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R + + MI+ Y + + L LF+ M G D+ + V AC+ ++EG
Sbjct: 264 HRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEG 322
Query: 249 FLYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ M+ D + G A+I + G G L EA E M + W +
Sbjct: 323 RMIHGFMREIRFDRHVNAG----NALINMYGKCGSLEEAVEVFRSMQHRDVIS-WNTI-- 375
Query: 306 FAQIHGDVELEDRAEELLG--DLDPSKA----IVDKIPL 338
HG A LL LD KA V+ +PL
Sbjct: 376 -IAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPL 413
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 204/367 (55%), Gaps = 28/367 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRN 193
L +C L +++ G+ VH+ + +V++ N +I+MY KC + A VF+ +R ++
Sbjct: 212 LLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKS 271
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L +W+ MI +A +G G L LFE++ ++G PD ++L V AC A V++G F
Sbjct: 272 LITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFN 331
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M G+ P I+HY +++ +LG AG L EA + V +PF P + +W+ L + +GDV
Sbjct: 332 SMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDV 389
Query: 314 ELEDRAEELL--------GDL-------------DPSKAIVDKIPLPPRKKQSATNMLEE 352
E+ + A L GD D + D + KK + +E
Sbjct: 390 EMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEI 449
Query: 353 KNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
K ++ + + D R Y K+ +N +++ GY DT VLHDI +E KE AL YHS
Sbjct: 450 KGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHS 509
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL T P+++IKNLRICGDCH IK++SKI RE+IVRD RFH F++G
Sbjct: 510 EKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGL 569
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 570 CSCKDYW 576
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L +C + ++H L F DV L L++ Y K + LA+K+FD++ +
Sbjct: 107 SFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQ 166
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG-- 248
+++SW+ +I+G+A + AD +M F++M+ G P+ T AC+ A+KEG
Sbjct: 167 PDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGES 226
Query: 249 ---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
++ E + ++ + +I + G + +A E M + ++ W +
Sbjct: 227 VHKYIVEEKLNSNVQVCN------VVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIM 280
Query: 306 FAQIHGD 312
+HGD
Sbjct: 281 AFAMHGD 287
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 200/368 (54%), Gaps = 26/368 (7%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVK-DVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
+L + L ++E GK +H ++ S V+ V + LI+MY KC + A VF + +
Sbjct: 525 VLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDK 584
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ W+ MI+GYA +G L +F Q R+ G P TF+ + AC+ + V+EG +F
Sbjct: 585 DIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFF 644
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
+ M+ +YGI P IEHY ++ +LG AG + EA V+ M P +W +L ++H +
Sbjct: 645 QSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKN 704
Query: 313 VELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKKQSATNMLE 351
+ L + + L G+ + + +K+ + +E
Sbjct: 705 MSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIE 764
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
V ++ + D+ Y + +NG ++E G+VP T VLHD+DE KEKAL H
Sbjct: 765 IDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVH 824
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+A+GLIST P ++I+KNLR C DCH +K++S+I GR+++ RD RFHHF DG
Sbjct: 825 SEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDG 884
Query: 468 KCSCGDYW 475
CSCGDYW
Sbjct: 885 SCSCGDYW 892
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
AR +FD L ++ W+ MI GY +G+ + L LF +M +G PD+ T ++V +A A
Sbjct: 472 ARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQ 531
Query: 242 AEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWE 301
V+ G +KN + + A+I + G L +A + + + + VW
Sbjct: 532 LGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIG-DKDIVVWN 590
Query: 302 ALRNFAQIHGD 312
A+ N +HGD
Sbjct: 591 AMINGYAMHGD 601
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 203/375 (54%), Gaps = 35/375 (9%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
+++L CG L EMGK++H S F+ D+ + N +I MY KC N A KVF+ +
Sbjct: 530 TAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA 589
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC--ASAEAVKEGF 249
++ SW+ +I+G+ + QG + L ++ +M K G PD TF+++ +A ++ V
Sbjct: 590 HDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCR 649
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
F MK Y I P +EHY +++ VLG G L EAEE + +MP EP VW AL + +I
Sbjct: 650 RLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRI 709
Query: 310 HGDVELEDRAEELL---GDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRVSDYR------ 360
H + + RA + L LDPS I+ + ++M+ E+ RV +R
Sbjct: 710 HSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRS 769
Query: 361 --------------------STDLYRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAK 400
+ D++ G ++ L + +AGYVPDT +VLH+++E K
Sbjct: 770 WIIHENKVHSFYARDKSHPQAKDIHSG----LELLIMECLKAGYVPDTSFVLHEVEEHQK 825
Query: 401 EKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 460
+ L YHS ++A YGL+ T P P+RI+KN+ +CGDCH +K +S + GRE+ +RD
Sbjct: 826 KDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASG 885
Query: 461 FHHFRDGKCSCGDYW 475
H F +G+CSC DYW
Sbjct: 886 HHCFLNGQCSCKDYW 900
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 107 KEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVE 164
K + R+A+E + S+ + FS ++L C L +E+G ++H ++ F+
Sbjct: 166 KSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTF 225
Query: 165 LNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTG 224
++N L+ +YGKC ++FD++ R+++SW+ +IS LF MR+
Sbjct: 226 VSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRID 285
Query: 225 ----PHPDKETFLVVFAACAS-------AEAVKEGF 249
H T LV AS A +K GF
Sbjct: 286 GFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGF 321
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 25/170 (14%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRN 193
LLD +E+ K VH + A +D+ L N LI Y K A KVF L N
Sbjct: 96 LLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 153
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA-----------SA 242
+ S+ MISG+A + + + +F +MR +G ++ +F+ + C A
Sbjct: 154 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHA 213
Query: 243 EAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMP 292
+K GFL + + N A++ + G G+L + + MP
Sbjct: 214 IVIKMGFLNYTFVSN------------ALMGLYGKCGYLDSVLQLFDEMP 251
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 138 CGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSW 197
CG++K + + E +R V+DV ++I Y + T LA +VFD++ RN S+
Sbjct: 338 CGSIKHV---VALFEKMR----VRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISY 390
Query: 198 HLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVK-----EGFLYF 252
+ ++SG+ NG+G+ L F +M + G T V AC K GF
Sbjct: 391 NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGF--- 447
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEE 286
I+K +G IE A++ + G + +A++
Sbjct: 448 -ILKFGFGSNACIE--AALLDMCTRCGRMADAQK 478
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMGQDASASAGYDVFS--SLLDSCGNLKSIEMGKRVHELL 154
S + L C+ G+ +A+ + + F+ +L++CG L ++ K++H +
Sbjct: 389 SYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFI 448
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSS--WHLMISGYAANGQGAD 212
F + + L++M +C A+K+F Q S W MI GYA N Q +
Sbjct: 449 LKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEE 508
Query: 213 GLMLFEQMRKTGPH-PDKETFLVVFAACAS-----------AEAVKEGFL 250
+ LF Q + G DK V C + A+K GFL
Sbjct: 509 AISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFL 558
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 203/359 (56%), Gaps = 26/359 (7%)
Query: 143 SIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMIS 202
S+ GK +H+ +R + ++ + N ++ MY K LARK+F ++ ++ SW+ MIS
Sbjct: 521 SLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMIS 580
Query: 203 GYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDY-GI 261
+A +G L F +M G P+ TF+ V +AC+ VK+G F + +D+ I
Sbjct: 581 AFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTI 640
Query: 262 VPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEE 321
P EHY ++ ++ AG L AE+F+ P +P + + +++H DVE ++ E
Sbjct: 641 SPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAE 700
Query: 322 LLGDLDPSKA--------IVDKIPLPPR-------------KKQSATNMLEEKNRVSDYR 360
L +L P ++ + D++ +K+ A + + K RV ++
Sbjct: 701 HLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFF 760
Query: 361 STDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYG 416
+ D E+++ L+ +M +AGY PDT +LHD+ +E K++ L YHSE+LAIA+G
Sbjct: 761 TGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFG 820
Query: 417 LISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
LIST P LRIIKNLR+CGDCH A K +SKI GRE++VRD+ RFHHF +G CSCGDYW
Sbjct: 821 LISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F + L C +++ G+ +H + S DV L+N +++MYG C +T A +VF ++
Sbjct: 407 FVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK 466
Query: 191 KRNLSSWHLMISGYAANGQ-GADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
R+ SW+ MI+ YAA + ++ L+LF+QM+ G PD +F+ +ACA+ ++ EG
Sbjct: 467 VRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK 526
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN-FAQ 308
L + ++ + G+ + A++ + +G L+ A + +MP P V W + + FAQ
Sbjct: 527 LLHDRIR-ETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQ 584
Query: 309 IHG 311
HG
Sbjct: 585 -HG 586
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
++L++C + +E G+ +H +R F + V N LI MYGKC + A +VF ++ R
Sbjct: 308 AVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHR 367
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
++ SW+ +I+ + + Q + L L M+ G DK +F+ CA++EA+ +G +
Sbjct: 368 DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIH 427
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ + GI + AI+ + GS +A M V W A+
Sbjct: 428 SWIV-ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS-WNAM 476
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 131 FSSLLDSC-GNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
F ++L +C + + +E G+R+H +LR +A D ++ L+ MYGKC + ARKVFD +
Sbjct: 102 FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACA 240
R + + W+ MI+ YA + +F M G ++ TF+ V AC+
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACS 212
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
++ LLD + +S+++GK VH + SA + + + L+ MY C + A+ FD++
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAAC-ASAEAVKEGF 249
++ +W +I + G L LF M+ G P F+ V AC A E ++EG
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG- 119
Query: 250 LYFEIMKNDYGIVPGI----EHYIA--IIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ +G++ G +HY++ ++ + G + +A + + + + VE W A+
Sbjct: 120 ------RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVE-WNAM 172
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 14/231 (6%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELL--RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
F +LD+C LK +E+ K V + R + D L+ YG C + A + F +
Sbjct: 204 FIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSR 263
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEG 248
R + + MI+ Y + + L LF+ M G D+ + V AC+ ++EG
Sbjct: 264 HRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEG 322
Query: 249 FLYFEIMKN---DYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
+ M+ D + G A+I + G G L EA E M + W +
Sbjct: 323 RIIHGFMREIRFDRHVNAG----NALINMYGKCGSLEEAVEVFRSMQHRDVIS-WNTI-- 375
Query: 306 FAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLPPRKKQSATNMLEEKNRV 356
HG A LL + DKI AT+ K R+
Sbjct: 376 -IAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRM 425
>gi|387169524|gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
Length = 511
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 208/370 (56%), Gaps = 28/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+S L +C L + K VH L+ + + L++ L+++Y KC + +R+VF ++
Sbjct: 145 FASSLAACARLGDLHHAKWVHSLMIDAGIELNAILSSALVDVYAKCGDIETSREVFYSVK 204
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+ ++S W+ MI+G+A +G + + +F +M PD TFL + AC+ + +G +
Sbjct: 205 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTACSHCGLLGKGKV 264
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF+IM + I P +EHY A++ +LG AG + EA E +E MP EP V +W +L + ++ +
Sbjct: 265 YFDIMSQRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTY 324
Query: 311 GDVELEDRAEELLGDLDPSKA----IVDKIPLPPRKKQSATN----MLEEKNRVSDYRST 362
+ EL + A + +L +K+ ++ I +K +SA M +E R + +S
Sbjct: 325 KNPELGEIA---IQNLSKAKSGDYVLLSNIYSTTKKWESAQKVRELMTKEGIRKAKGKSW 381
Query: 363 DLYRGE-----------------YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
Y G Y+ ++GL + + G+V DT VL D+ EE KE+ L
Sbjct: 382 VEYGGVIHRFKAGDTSHIEIKAIYKVLEGLIQKTKSEGFVSDTDLVLMDVSEEEKEENLN 441
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
YHSE+LA+AY ++ + P +RI KN+R+C DCHN IK +SK++ R +I+RD RFH F
Sbjct: 442 YHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFE 501
Query: 466 DGKCSCGDYW 475
DG CSC DYW
Sbjct: 502 DGLCSCKDYW 511
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK-TG 224
N +IE K + LA+KV +N+ +W+LMI GY N Q + L + M +
Sbjct: 78 TNLIIESLMKIGESSLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKTLKNMLSFSD 137
Query: 225 PHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEA 284
P+K +F AACA + +M D GI A++ V G + +
Sbjct: 138 IKPNKFSFASSLAACARLGDLHHAKWVHSLMI-DAGIELNAILSSALVDVYAKCGDIETS 196
Query: 285 EEFVERMPFEPTVEVWEALRNFAQIHG 311
E + V +W A+ HG
Sbjct: 197 REVFYSVK-RNDVSIWNAMITGFATHG 222
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 209/384 (54%), Gaps = 27/384 (7%)
Query: 118 MGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCC 177
M ++ S + S+L +C +L ++++G+ H L + +V + LI+MY KC
Sbjct: 177 MSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCG 236
Query: 178 NTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFA 237
+F ++ K+N S+ +MI+G A +G+G + L +F M + G PD +L V +
Sbjct: 237 CIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLS 296
Query: 238 ACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTV 297
AC A V EG F MK ++GI P I+HY I+ ++G AG L +A E + MP +P
Sbjct: 297 ACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNE 356
Query: 298 EVWEALRNFAQIHGDVELEDRAEELLGDLDPSKAIVDKIPLP------------------ 339
VW L + + H ++E+ + A + LG+L+ S D + L
Sbjct: 357 VVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNP-GDYVVLSNMYARAKRWEDVAKIRTE 415
Query: 340 -PRKKQSAT---NMLEEKNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYV 391
RK + T ++++ + ++ + S D+ +G YE + + Q++ GY PDT V
Sbjct: 416 MARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQV 475
Query: 392 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGR 451
L D+DEE K + L+ HS++LA+A+ LI T P+RI +NLR+C DCH K++S I R
Sbjct: 476 LFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQR 535
Query: 452 ELIVRDNKRFHHFRDGKCSCGDYW 475
E+ VRD RFHHF+DG CSC DYW
Sbjct: 536 EITVRDRNRFHHFKDGTCSCRDYW 559
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ +L +C +L+SIE G ++H + D+ + N LI MYGKC L+ VF+ +
Sbjct: 87 TYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHM 146
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLV-VFAACASAEAVKEG 248
+R+++SW +I+ +A+ G ++ L +F +M + G +E+ LV V +AC A+ G
Sbjct: 147 DRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLG 206
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 182 ARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACAS 241
A +F Q+ + ++ MI GY + L L+ +M + G D T+ +F ACAS
Sbjct: 38 ACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACAS 97
Query: 242 AEAVKEG 248
+++EG
Sbjct: 98 LRSIEEG 104
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 220/408 (53%), Gaps = 29/408 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + G E+ Y Q A S + +L +C S E GK +H +
Sbjct: 228 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 287
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYAANGQGADG 213
+ + V +NN LI+MY +C N +AR VF+ ++ KR + SW MI+G A +GQG +
Sbjct: 288 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 347
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
+ LF +M G PD +F+ + AC+ A ++EG YF MK Y I P IEHY ++
Sbjct: 348 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 407
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--- 330
+ G +G L +A +F+ +MP PT VW L HG++EL ++ ++ L +LDP+
Sbjct: 408 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 467
Query: 331 -----------------AIVDKIPLPPR-KKQSATNMLEEKNRVSDYRSTDLYRG----E 368
A + K + R KK +A +++E + + + + +G
Sbjct: 468 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 527
Query: 369 YEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
+EK+K + +++ EAGY P+ L+D++EE KE + HSE+LA+A+ L +R
Sbjct: 528 HEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIR 587
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I+KNLRIC DCH +K+ SK+ G E++VRD RFH F+DG CSC DYW
Sbjct: 588 IVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 39/219 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ ++ + N +S+ G ++H + + LI MYG C ARKVFD++
Sbjct: 101 FAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH 160
Query: 191 K-------------------------------RNLSSWHLMISGYAANGQGADGLMLFEQ 219
+ RN +SW++M++GY G+ +F +
Sbjct: 161 QPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 220
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M PH D ++ + A + E FLYF ++ G+ P ++ +G
Sbjct: 221 M----PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA-GMSPNEVSLTGVLSACSQSG 275
Query: 280 HLIEAE---EFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
+ FVE+ + V V AL + G+V +
Sbjct: 276 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 314
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A+++F ++ R+ SW MI G A NG + + F ++++ G
Sbjct: 199 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 258
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P++ + V +AC+ + + + G L+ + K Y + + + A+I + G++ A
Sbjct: 259 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN--ALIDMYSRCGNVPMAR 316
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVE 314
E M + + W ++ +HG E
Sbjct: 317 LVFEGMQEKRCIVSWTSMIAGLAMHGQGE 345
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLR 190
SLL+SC NL+++ ++H L D KLI + L AR++
Sbjct: 2 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 58
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ + ++ ++ GY+ + + + + +F E MRK PD +F V A + +++ GF
Sbjct: 59 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 118
Query: 250 -LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + +K+ G+E ++ +I + G G + A + + M +P + W A+
Sbjct: 119 QMHCQALKH------GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH-QPNLVAWNAV 170
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 208/370 (56%), Gaps = 27/370 (7%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+S+L +C L +E+G + H + + +D+ LNN L++MY KC + A +VF+Q++
Sbjct: 263 LTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
+R++ +W MISG A NG + L LFE+M+ +G P+ T + V AC+ A +++G+
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWY 380
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
YF MK YGI P EHY +I +LG AG L +A + + M EP W L ++
Sbjct: 381 YFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
Query: 311 GDVELEDRAEELLGDLDPSKA-----------------IVDKIPLPPR----KKQSATNM 349
++ L + A + + LDP A V++I R KK+ +
Sbjct: 441 RNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSW 500
Query: 350 LEEKNRVSDYRSTDLYRGEY----EKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQ 405
+E ++ + D + +K+ L ++ GYVP+T +VL D++ E E +L+
Sbjct: 501 IEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLR 560
Query: 406 YHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 465
+HSE+LA+A+GL++ P +RI KNLRICGDCH K+ SK+ R +++R R+HHF+
Sbjct: 561 HHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQ 620
Query: 466 DGKCSCGDYW 475
DGKCSCGDYW
Sbjct: 621 DGKCSCGDYW 630
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
+SS+L SC + + M +H + DV + + LI+++ K A VFD++
Sbjct: 165 YSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF- 249
+ W+ +I G+A N + L LF++M++ G ++ T V AC ++ G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
+ I+K D ++ A++ + G L +A +M E V W +
Sbjct: 282 AHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTM 330
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 9/216 (4%)
Query: 105 LCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKD 162
LC + + A++ M Q A +S L+ C + +++ G + L +
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 163 VELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRK 222
+ L N LI MY K A ++FDQ+ +RN+ SW MIS Y+ L L M +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 223 TGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLI 282
P+ T+ V +C V+ L+ I+K G+ + A+I V G
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR--MLHCGIIKE--GLESDVFVRSALIDVFAKLGEPE 211
Query: 283 EAEEFVERMPFEPTVEVWEA-LRNFAQ-IHGDVELE 316
+A + M + VW + + FAQ DV LE
Sbjct: 212 DALSVFDEMVTGDAI-VWNSIIGGFAQNSRSDVALE 246
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 220/408 (53%), Gaps = 29/408 (7%)
Query: 97 SLDVNLLSLCKEGKVREAIEYMG--QDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELL 154
S ++ + G E+ Y Q A S + +L +C S E GK +H +
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 155 RTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRNLSSWHLMISGYAANGQGADG 213
+ + V +NN LI+MY +C N +AR VF+ ++ KR + SW MI+G A +GQG +
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 214 LMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIK 273
+ LF +M G PD +F+ + AC+ A ++EG YF MK Y I P IEHY ++
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 274 VLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPSK--- 330
+ G +G L +A +F+ +MP PT VW L HG++EL ++ ++ L +LDP+
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 331 -----------------AIVDKIPLPPR-KKQSATNMLEEKNRVSDYRSTDLYRG----E 368
A + K + R KK +A +++E + + + + +G
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 535
Query: 369 YEKMKGLNGQMR-EAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLR 427
+EK+K + +++ EAGY P+ L+D++EE KE + HSE+LA+A+ L +R
Sbjct: 536 HEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIR 595
Query: 428 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
I+KNLRIC DCH +K+ SK+ G E++VRD RFH F+DG CSC DYW
Sbjct: 596 IVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 39/219 (17%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F+ ++ + N +S+ G ++H + + LI MYG C ARKVFD++
Sbjct: 109 FAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH 168
Query: 191 K-------------------------------RNLSSWHLMISGYAANGQGADGLMLFEQ 219
+ RN +SW++M++GY G+ +F +
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M PH D ++ + A + E FLYF ++ G+ P ++ +G
Sbjct: 229 M----PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA-GMSPNEVSLTGVLSACSQSG 283
Query: 280 HLIEAE---EFVERMPFEPTVEVWEALRNFAQIHGDVEL 315
+ FVE+ + V V AL + G+V +
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 167 NKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPH 226
N ++ Y K A+++F ++ R+ SW MI G A NG + + F ++++ G
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 227 PDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAE 285
P++ + V +AC+ + + + G L+ + K Y + + + A+I + G++ A
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN--ALIDMYSRCGNVPMAR 324
Query: 286 EFVERMPFEPTVEVWEALRNFAQIHGDVE 314
E M + + W ++ +HG E
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRL--ARKVFDQLR 190
SLL+SC NL+++ ++H L D KLI + L AR++
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLF-EQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+ + ++ ++ GY+ + + + + +F E MRK PD +F V A + +++ GF
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 250 -LYFEIMKNDYGIVPGIEHYI----AIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEAL 303
++ + +K+ G+E ++ +I + G G + A + + M +P + W A+
Sbjct: 127 QMHCQALKH------GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH-QPNLVAWNAV 178
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 201/368 (54%), Gaps = 25/368 (6%)
Query: 133 SLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKR 192
S++ +C +L +++ K +H + + F + +NN LIEMY KC + AR++FD++ ++
Sbjct: 360 SVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK 419
Query: 193 NLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYF 252
N+ SW MIS +A +G L F QM P+ TF+ V AC+ A V+EG F
Sbjct: 420 NVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF 479
Query: 253 EIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
M N++ I P HY ++ + G A L EA E VE MP P V +W +L ++HG+
Sbjct: 480 YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539
Query: 313 VELEDRAEELLGDLDP----SKAIVDKIPLPPRK-----------------KQSATNMLE 351
+EL + A + L +LDP + + I R+ K+ + E
Sbjct: 540 IELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFE 599
Query: 352 EKNRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYH 407
N + ++ D YEK+ + +++ GY P+T +L D++EE K++ + +H
Sbjct: 600 LNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWH 659
Query: 408 SERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDG 467
SE+LA+ YGL+ +RIIKNLR+C DCH IK+ SK+ RE++VRD RFHH++DG
Sbjct: 660 SEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDG 719
Query: 468 KCSCGDYW 475
CSC DYW
Sbjct: 720 VCSCKDYW 727
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
F LL + +KS+ G +H L F D + L+ MY C AR +FD++
Sbjct: 125 FPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMF 184
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFL 250
R++ +W +MI GY +G D L+LFE+M+ PD+ V +AC A + G +
Sbjct: 185 HRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244
Query: 251 YFE-IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERM 291
+ IM+N+ + P ++ A++ + S G + A E+M
Sbjct: 245 IHDFIMENNIVVDPHLQS--ALVTMYASCGSMDLALNLFEKM 284
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
+ S++L +CG ++ GK +H+ + + V D L + L+ MY C + LA +F+++
Sbjct: 225 MLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKM 284
Query: 190 RKRNLSSWHLMISGYAANGQ-------------------------------GADGLMLFE 218
+NL + M++GY+ GQ + L LF
Sbjct: 285 TPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFN 344
Query: 219 QMRKTGPHPDKETFLVVFAACASAEAVKEG-FLYFEIMKNDYGIVPGIEHYIAIIKVLGS 277
+M+ G PD+ T L V ACA A+ + +++ + KN +G I + A+I++
Sbjct: 345 EMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINN--ALIEMYAK 402
Query: 278 AGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGD 312
G L A ++MP + + W + + +HGD
Sbjct: 403 CGSLERARRIFDKMPRKNVIS-WTCMISAFAMHGD 436
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 201/366 (54%), Gaps = 25/366 (6%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNL 194
L + + +E G+ VHE+++ + V + L++M+ KC +AR+VFD + +R++
Sbjct: 270 LSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDV 329
Query: 195 SSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEI 254
+W+ MI G A++G G D + LF + G P TF+ V AC+ V EG YF++
Sbjct: 330 FAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKL 389
Query: 255 MKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVE 314
M + Y I P +EHY ++ +LG AG + EA E +E M P +W + + + H V+
Sbjct: 390 MVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVD 449
Query: 315 LEDRAEELLGDLDPSK----AIVDKIPLPPRK-----------------KQSATNMLEEK 353
L L +L+P+ ++ I +K K + +++E +
Sbjct: 450 LGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEAQ 509
Query: 354 NRVSDYRSTDLYRGE----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSE 409
+ + D+ + Y + +N ++ +AGYVPD VLHDI +E K A++ HSE
Sbjct: 510 GNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHSE 569
Query: 410 RLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKC 469
RLAIAYG I T P+RI+KNL++CGDCH K+++K+ RE+IVRD RFHH ++GKC
Sbjct: 570 RLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRDGSRFHHMKEGKC 629
Query: 470 SCGDYW 475
SC DYW
Sbjct: 630 SCLDYW 635
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 160 VKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQ 219
V+DV N ++ Y + R AR+VF+++ R+ SW ++ GY G+ L +F
Sbjct: 194 VRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRD 253
Query: 220 MRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAG 279
M + G ++ + +A A ++ G E+++ G+ + A++ + G
Sbjct: 254 MVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRT-GMPVSVNVGAALVDMFSKCG 312
Query: 280 HLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
+ A E + MP V W A+ HG
Sbjct: 313 CVAVAREVFDGMP-RRDVFAWNAMICGLASHG 343
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL- 189
S+ LD+ + S +G VH L + D+ + N L YG C + R VFD+L
Sbjct: 133 ISNHLDATDHRASSFLGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELP 192
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQM 220
R R++ +W+ +++GY G +FE+M
Sbjct: 193 RVRDVVTWNAVLAGYVRAGMVRAAREVFEEM 223
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 204/367 (55%), Gaps = 28/367 (7%)
Query: 135 LDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR-KRN 193
L +C L +++ G+ VH+ + +V++ N +I+MY KC + A VF+ +R ++
Sbjct: 212 LLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKS 271
Query: 194 LSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFE 253
L +W+ MI +A +G G L LFE++ ++G PD ++L V AC A V++G F
Sbjct: 272 LITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFN 331
Query: 254 IMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDV 313
M G+ P I+HY +++ +LG AG L EA + V +PF P + +W+ L + +GDV
Sbjct: 332 SMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDV 389
Query: 314 ELEDRAEELLGDL---------------------DPSKAIVDKIPLPPRKKQSATNMLEE 352
E+ + A L ++ D + D + KK + +E
Sbjct: 390 EMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEI 449
Query: 353 KNRVSDYRSTDL----YRGEYEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHS 408
K ++ + + D R Y K+ +N +++ GY DT VLHDI +E KE AL YHS
Sbjct: 450 KGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHS 509
Query: 409 ERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGK 468
E+LA+A+GL T P+++IKNLRICGDCH IK++SKI RE+IVRD RFH F++G
Sbjct: 510 EKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGL 569
Query: 469 CSCGDYW 475
CSC DYW
Sbjct: 570 CSCKDYW 576
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
S L +C + ++H L F DV L L++ Y K + LA+K+FD++ +
Sbjct: 107 SFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQ 166
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGP-HPDKETFLVVFAACASAEAVKEG-- 248
+++SW+ +I+G+A + AD +M F++M+ G P+ T AC+ A+KEG
Sbjct: 167 PDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGES 226
Query: 249 ---FLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRN 305
++ E + ++ + +I + G + +A E M + ++ W +
Sbjct: 227 VHKYIVEEKLDSNVQVCN------VVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIM 280
Query: 306 FAQIHGD 312
+HGD
Sbjct: 281 AFAMHGD 287
>gi|302794404|ref|XP_002978966.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
gi|300153284|gb|EFJ19923.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
Length = 318
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 177/317 (55%), Gaps = 26/317 (8%)
Query: 185 VFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEA 244
VF +R +NL SW MI+ + NG L F M G PD TF + +AC+ A
Sbjct: 2 VFSSIRNKNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFPDAVTFKSILSACSHAGL 61
Query: 245 VKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALR 304
+ GF +F+++ +D+GI P ++H+ ++ +LG +G L+EAEE V+ MPF P W L
Sbjct: 62 FEHGFFHFDLLVHDFGIAPTMDHFKCMVDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLL 121
Query: 305 NFAQIHGDVELEDRAEELL---------------------GDLDPSKAIVDKIPLPPRKK 343
++H VE RA E+L GD + D + +K
Sbjct: 122 AACRVHKSVERGKRAAEMLLELTSEIPGYYVLLSNIHAAAGDHAEKAKVRDLMEARGVRK 181
Query: 344 QSATNMLEEKNRVSDYRSTDLYRGE-----YEKMKGLNGQMREAGYVPDTRYVLHDIDEE 398
+ + +E +R ++ + + ++ E++K L+ M+EAGYVPDT VL ++E+
Sbjct: 182 KPGWSTIEINDRFHEFTAGEKFQHPKKQQILEELKRLSVLMKEAGYVPDTTEVLRLVNED 241
Query: 399 AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDN 458
KE L +HSE+LAI GLISTPP LR++KNLR+C DCH+A K +SKI R++IVRD
Sbjct: 242 EKESLLFFHSEKLAITCGLISTPPGTTLRVVKNLRVCSDCHSATKFISKITRRKIIVRDL 301
Query: 459 KRFHHFRDGKCSCGDYW 475
RFHH +G CSCGDYW
Sbjct: 302 NRFHHTENGVCSCGDYW 318
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 216/412 (52%), Gaps = 27/412 (6%)
Query: 91 GNAQLESLDVNLLSLCKEGKVREAIEYMGQDASASAGYD--VFSSLLDSCGNLKSIEMGK 148
G+ + + +V ++ + K EA Y D FS++L S +L ++ G
Sbjct: 409 GDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGT 468
Query: 149 RVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANG 208
+H+ + +VK++ + LI MY KC + A +VF+ + N+ SW MIS Y +G
Sbjct: 469 AIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHG 528
Query: 209 QGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHY 268
+ LFE M G P TF+ V +AC+ V+EG +F MK + + PG EHY
Sbjct: 529 CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHY 588
Query: 269 IAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDP 328
++ +LG AG L EA+ F+E MP +PT VW AL + +G++++ A E L +++P
Sbjct: 589 ACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEP 648
Query: 329 ---------------------SKAIVDKIPLPPRKKQSATNMLEEKNRVSDYRSTDLYRG 367
+ + + + +K+ + ++ KN + + D
Sbjct: 649 YNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHS 708
Query: 368 E----YEKMKGLNGQMREAGYVPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPR 423
Y+ ++ L +++ GYV +T +V + ++E +E+ L YHSE+LA+A+GL++ P
Sbjct: 709 SSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPID 768
Query: 424 MPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
P+RI KNLR CG CH +K+ SKI RE+IVRD RFH F DG CSCGDYW
Sbjct: 769 SPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 132 SSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK 191
SS+L +C N+ + G++VH ++ V + N L++MY KC K+F +
Sbjct: 351 SSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGD 410
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF-L 250
R++ +W++++ G+ N + + F MR+ G PD+ +F V + AS A+ +G +
Sbjct: 411 RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAI 470
Query: 251 YFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIH 310
+ +I+K G V + ++I + G L++A + E + + V W A+ + Q+H
Sbjct: 471 HDQIIK--LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLH 527
Query: 311 G 311
G
Sbjct: 528 G 528
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 131 FSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLR 190
FSS+L + + G+++H L+ F ++ + L++MY KC + A +VFDQ+
Sbjct: 248 FSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307
Query: 191 KRNLSSWHLMISGYAANGQGADGLMLFEQ-MRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+RNL SW+ MI G+ N + +F+ +R+ P++ + V +ACA+ + G
Sbjct: 308 ERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGR 367
Query: 250 LYFEIMKNDYGIVP 263
++ YG+VP
Sbjct: 368 QVHGVVV-KYGLVP 380
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 7/202 (3%)
Query: 134 LLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQLRK-- 191
LL++ +S++ ++H + + + L N LI +Y KC A +F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 192 RNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGFLY 251
+ + +W +I+ + L LF QMR +GP+P++ TF + +A A+ V G
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 252 FEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQIHG 311
++ + +G I A++ + + A ++MP E + W ++ H
Sbjct: 268 HSLI-HKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI-VGFFHN 324
Query: 312 DVELEDRAEELLGDLDPSKAIV 333
+ L DRA + D+ K ++
Sbjct: 325 N--LYDRAVGVFKDVLREKTVI 344
>gi|302818918|ref|XP_002991131.1| hypothetical protein SELMODRAFT_132950 [Selaginella moellendorffii]
gi|300141062|gb|EFJ07777.1| hypothetical protein SELMODRAFT_132950 [Selaginella moellendorffii]
Length = 582
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 207/374 (55%), Gaps = 29/374 (7%)
Query: 130 VFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQL 189
++ LD+C ++ G+ VH + +DV + N L++MYGKC + A VFD +
Sbjct: 210 TLATALDTCAASGNLHEGRVVHGWITMKGLEQDVFVGNALVDMYGKCGSVEEAWAVFDNM 269
Query: 190 RKRNLSSWHLMISGYAANGQGADGLMLFEQMRKTGPHPDKETFLVVFAACASAEAVKEGF 249
+++N SW+ M+ Y ++G + + +F QM + G P+ +TF V AC A ++EG
Sbjct: 270 KEKNWFSWNFMVEAYCSSGYSTEAIQVFLQMLQEGVKPNAKTFTSVLVACGHAGFIREGI 329
Query: 250 LYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVERMPFEPTVEVWEALRNFAQI 309
L+ M +DY +VP EHY + +LG +G + EAEE+V+++P + VW+AL +I
Sbjct: 330 LHLVYMSSDYDVVPIAEHYACAVGLLGRSGWVKEAEEYVKKLP-DAEAPVWDALVTACRI 388
Query: 310 HGDVELEDRAEELLGDLDP----SKAIVDKI---------PLPPRKKQSATNMLEEKNRV 356
HGD++ A E L + P S A+V + R+ ++ + EE+
Sbjct: 389 HGDLDRGRSAAESLLECSPHAARSYAVVAGLYNALARSDDAARVRETMTSKGLTEERVTS 448
Query: 357 S---------DYRSTDL----YRGEYEKMKGLNGQMREAGYVPD-TRYVLHDIDEEAKEK 402
S ++ + D +G + +++ L ++ + GY PD ++ ++H+ EE +++
Sbjct: 449 SILVGNTTCHEFITADTRHKRIQGIHAELEDLGQRIAKDGYAPDASKLLMHERAEEQRQE 508
Query: 403 ALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD-NKRF 461
+L YHSERLA+ G I PLRII+N R+C DCH AIK MSK +GR +I+RD + +
Sbjct: 509 SLFYHSERLAVGLGAIKIRGDCPLRIIRNFRMCADCHTAIKFMSKAMGRTIILRDGSSQL 568
Query: 462 HHFRDGKCSCGDYW 475
H F DG C+C DYW
Sbjct: 569 HRFVDGHCACRDYW 582
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 129 DVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVELNNKLIEMYGKCCNTRLARKVFDQ 188
D F ++ C LK++ G+R+HE L + + L +++MY C + AR +FD
Sbjct: 3 DYFLYIVRLCTRLKALVAGRRIHEQLVQMGIAEQLPLAKFIVQMYLSCGSLDEARNLFDL 62
Query: 189 LRKRNLSSWHLMISGYAANGQGADGLMLFEQMR-KTGPHPDKETFLVVFAACASAEAV 245
L +++ W +I+ YA G+ + + LFE M +TG P K T+ V + ASAE++
Sbjct: 63 LPSKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTG--PAKATYFAVMKSFASAESL 118
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 107 KEGKVREAIE-YMGQDASASAGYDVFSSLLDSCGNLKSIEMGKRVHELLRTSAFVKDVEL 165
K G+ +EAI+ + ++ + +++ S + +S+ + VH + D +
Sbjct: 80 KYGRWQEAIKLFETMESRTGPAKATYFAVMKSFASAESLAGARLVHSRIVELGAENDDLV 139
Query: 166 NNKLIEMYGKCCNTRLARKVFDQLRK-----RNLSSWHLMISGYAANGQGADGLMLFEQM 220
LIEMYG+C + A +F ++ W+ +IS NGQ L LF +M
Sbjct: 140 RAALIEMYGRCGSLEEAWSIFSSSVAGDGGPHSVLVWNAIISASFQNGQLKGSLELFWKM 199
Query: 221 RKTGPHPDKETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYI----AIIKVLG 276
R+ G PD T CA++ + EG + + + + G+E + A++ + G
Sbjct: 200 RRQGVRPDSLTLATALDTCAASGNLHEGRVV-----HGWITMKGLEQDVFVGNALVDMYG 254
Query: 277 SAGHLIEAEEFVERM 291
G + EA + M
Sbjct: 255 KCGSVEEAWAVFDNM 269
>gi|302773103|ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
gi|300162480|gb|EFJ29093.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
Length = 331
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 188/331 (56%), Gaps = 27/331 (8%)
Query: 172 MYGKCCNTRLARKVFDQLRKRNLSSWHLMISGYAANGQGADGLMLFEQMRKT--GPHPDK 229
MYGKC + AR+VF+ R+++ W+ MI+ YA NGQG L +FE+M++ P+
Sbjct: 1 MYGKCGSVDEARQVFEAFPDRDVALWNSMIAAYAQNGQGEMSLQVFERMKEATNNARPNA 60
Query: 230 ETFLVVFAACASAEAVKEGFLYFEIMKNDYGIVPGIEHYIAIIKVLGSAGHLIEAEEFVE 289
TF+ V AC+ A ++ G YF M+ +GI P +HY +I +LG +G+L +A +
Sbjct: 61 ITFVHVLCACSHARLIERGRSYFGSMETVFGIQPSSQHYRCMIDLLGRSGNLDQAWNILH 120
Query: 290 RMPFEPTVEVWEALRNFAQIHGDVELEDRAEELLGDLDPS-----------KAIVDKIPL 338
MP EP W + + + H +VEL + E L +++P A D+
Sbjct: 121 SMPLEPDSLAWTTMLSACRAHSNVELGELCAERLFEMEPEYSAPYVLLSNIYAARDRWDD 180
Query: 339 PPR----------KKQSATNMLEEKNRVSDYRSTDLY---RGE-YEKMKGLNGQMREAGY 384
R KK S + +E ++V ++ + D R E Y+++ L QM+ GY
Sbjct: 181 VARIRKLMADKGVKKPSGRSSIEVGDKVHEFVAGDRAHPRREEIYQELSRLGSQMKALGY 240
Query: 385 VPDTRYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKI 444
+ D L D +EE KE+ L YHSE+LAIA+G ++TP R L +IKNLR+C DCH A K
Sbjct: 241 IQDRSSALRDGEEEEKEQMLWYHSEKLAIAFGSVATPARKSLYVIKNLRVCTDCHTASKF 300
Query: 445 MSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 475
+S+I GRE+++RD RFHHFRDG CSCGDYW
Sbjct: 301 ISRITGREIVLRDPYRFHHFRDGWCSCGDYW 331
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,393,747,339
Number of Sequences: 23463169
Number of extensions: 308036515
Number of successful extensions: 878597
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6758
Number of HSP's successfully gapped in prelim test: 2977
Number of HSP's that attempted gapping in prelim test: 832976
Number of HSP's gapped (non-prelim): 36641
length of query: 475
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 329
effective length of database: 8,933,572,693
effective search space: 2939145415997
effective search space used: 2939145415997
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)