BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038375
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=2 SV=1
Length = 438
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+PG LK + LE +VKKQ +DGRLNA IC +PA A G+ GLL+G KATCYP FME+
Sbjct: 122 GGLPGGETLKNCKPLEKMVKKQDTDGRLNAAICCAPALAFGTWGLLEGKKATCYPVFMEK 181
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
LA ACAT VESRV DGK+VTSRGP TTMEF+V LVEQL GKE+A EVSGPLV+
Sbjct: 182 LA-ACATAVESRVEIDGKIVTSRGPGTTMEFSVTLVEQLLGKEKAVEVSGPLVM 234
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+ GA SE L +++KKQA + ICASPA GLLKG KAT +P+ +
Sbjct: 327 GGLGGAEAFASSEKLVNMLKKQAESNKPYGAICASPALVFEPHGLLKGKKATAFPAMCSK 386
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
L + +E RV DG ++TSRGP T++EFA+A+VE+ YG+E+ ++S +V
Sbjct: 387 LTD--QSHIEHRVLVDGNLITSRGPGTSLEFALAIVEKFYGREKGLQLSKATLV 438
>sp|Q9FPF0|DJ1A_ARATH Protein DJ-1 homolog A OS=Arabidopsis thaliana GN=DJ1A PE=1 SV=1
Length = 392
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 91/114 (79%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+PG LK + LE++VKKQ SDGRLNA IC +PA ALG+ GLL+G KAT YP FME+
Sbjct: 75 GGLPGGETLKNCKSLENMVKKQDSDGRLNAAICCAPALALGTWGLLEGKKATGYPVFMEK 134
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
LA CAT VESRV DG++VTSRGP TT+EF++ L+EQL+GKE+ADEVS L++
Sbjct: 135 LAATCATAVESRVQIDGRIVTSRGPGTTIEFSITLIEQLFGKEKADEVSSILLL 188
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+ GA E L ++++KQA + ICASPA GLLKG KAT +P ++
Sbjct: 281 GGLNGAQRFASCEKLVNMLRKQAEANKPYGGICASPAYVFEPNGLLKGKKATTHPVVSDK 340
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERA 105
L+ + +E RV DG V+TSR P T MEF++A+VE+ YG+E+A
Sbjct: 341 LSDK--SHIEHRVVVDGNVITSRAPGTAMEFSLAIVEKFYGREKA 383
>sp|Q7TQ35|PARK7_MESAU Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1
Length = 189
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES V++ I+K+Q S L A ICA P AL + + G K T +P ++
Sbjct: 74 GGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPGAKDK 132
Query: 61 LAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ + ESRV +DG ++TSRGP T+ EFA+A+VE L GKE AD+V PLV+
Sbjct: 133 MMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAADQVKAPLVL 187
>sp|Q8VY09|DJ1C_ARATH Protein DJ-1 homolog C OS=Arabidopsis thaliana GN=DJ1C PE=2 SV=1
Length = 472
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+PGA L++ E+LE I+K+QA D RL I +PA L GLL + T +P+F +
Sbjct: 153 GGMPGAVRLRDCEILEKIMKRQAEDKRLYGAISMAPAITLLPWGLLTRKRTTGHPAFFGK 212
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEV 108
L A V++ + G++ TSRGP T+ +FA++L EQL+G+ A +
Sbjct: 213 LPTFWA--VKTNIQISGELTTSRGPGTSFQFALSLAEQLFGETTAKSI 258
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG G+ L++S++L+ ++++Q GR+ +S + L GLLK + T YPS E
Sbjct: 356 GGHTGSERLQKSKILKKLLREQHESGRIYGATNSS-STVLHKHGLLKEKRTTVYPS--ES 412
Query: 61 LAPACATTVE-SRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTF 116
P +E + V DG V+TS G T +F++A+V +L+G RA VS LV +
Sbjct: 413 DEPMNQQMIEGAEVVIDGNVITSLGLATVTKFSLAIVSKLFGHARARSVSEGLVHEY 469
>sp|Q8UW59|PARK7_CHICK Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1
Length = 189
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES ++ I+K Q S L A ICA P AL + G+ G K +P ++
Sbjct: 74 GGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPT-ALLAHGIGFGSKVITHPLAKDK 132
Query: 61 L---APACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ A C + ESRV +DG ++TSRGP T+ EF +A+VE L GKE A++V PL++
Sbjct: 133 MMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLIL 187
>sp|Q99LX0|PARK7_MOUSE Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1
Length = 189
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES +++ I+K+Q S L A ICA P AL + + G K T +P ++
Sbjct: 74 GGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPT-ALLAHEVGFGCKVTTHPLAKDK 132
Query: 61 LAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ + ESRV +DG ++TSRGP T+ EFA+A+VE L GK+ A++V PLV+
Sbjct: 133 MMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMANQVKAPLVL 187
>sp|O88767|PARK7_RAT Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1
Length = 189
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES +++ I+K+Q + L A ICA P AL + + G K T +P ++
Sbjct: 74 GGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPT-ALLAHEVGFGCKVTSHPLAKDK 132
Query: 61 LAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ + ESRV +DG ++TSRGP T+ EFA+A+VE L GK+ A++V PLV+
Sbjct: 133 MMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMANQVKAPLVL 187
>sp|Q5XJ36|PARK7_DANRE Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1
Length = 189
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+ GA NL ES ++ ++K Q L A ICA P AL + G+ G T +P ++
Sbjct: 74 GGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPT-ALLAHGIAYGSTVTTHPGAKDK 132
Query: 61 L-APACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ A E+RV +DG V+TSRGP T+ EFA+ +VE+L G E A +V PL++
Sbjct: 133 MMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQVKAPLIL 187
>sp|Q5E946|PARK7_BOVIN Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1
Length = 189
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES ++ I+K+Q L A ICA P AL + + G K T +P ++
Sbjct: 74 GGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDK 132
Query: 61 LAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ + E+RV +DG ++TSRGP T+ EFA+ +VE L GKE AD+V PLV+
Sbjct: 133 MMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVADQVKAPLVL 187
>sp|Q99497|PARK7_HUMAN Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2
Length = 189
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES ++ I+K+Q + L A ICA P AL + + G K T +P ++
Sbjct: 74 GGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDK 132
Query: 61 LAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ T E+RV +DG ++TSRGP T+ EFA+A+VE L GKE A +V PLV+
Sbjct: 133 MMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 187
>sp|Q95LI9|PARK7_CHLAE Protein DJ-1 OS=Chlorocebus aethiops GN=PARK7 PE=2 SV=1
Length = 189
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG GA NL ES ++ I+K+Q + L A ICA P AL + + G K T +P ++
Sbjct: 74 GGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDK 132
Query: 61 LAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ T E+RV +DG ++TSRGP T+ EFA+A+VE L GKE A +V PLV+
Sbjct: 133 MMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 187
>sp|Q46948|YAJL_ECOLI Chaperone protein YajL OS=Escherichia coli (strain K12) GN=yajL
PE=1 SV=2
Length = 196
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+ GA ++S +L VK+ GR+ A ICA+PA L + T +P+ ++
Sbjct: 74 GGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDK 133
Query: 61 LAPACATTVESRVPQDGKV--VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ PA ++ RV D +V +TS+GP T ++F + +++ L G+E+A EV+ LV+
Sbjct: 134 I-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVM 187
>sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1
Length = 228
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 3 VPGATN---LKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFME 59
VPG L E E ++ QA+ R +C + LG+ GLL+G +AT + ++ +
Sbjct: 68 VPGGAGVGPLMEDEQTLDFIRSQAAQARYVTSVCTG-SLVLGAAGLLQGKRATTHWAYHD 126
Query: 60 QLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEV 108
L A V+ RV +DG + T G ++FA+ L ++L G + A V
Sbjct: 127 LLPTLGAIPVKDRVVRDGNLFTGGGITAGIDFALTLAQELVGVDTAQLV 175
>sp|P55880|YAJL_SALTY Chaperone protein YajL OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=yajL PE=3 SV=2
Length = 196
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
GG+ GA ++S +L VK+ GR+ A ICA+ A L + T +P+ ++
Sbjct: 74 GGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDK 133
Query: 61 LAPACATTVESRVPQDGKV--VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVV 114
+ PA ++ RV D +V +TS+GP T ++F + +++ L G+E+A EV+ LV+
Sbjct: 134 I-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLVM 187
>sp|O59413|PFPI_PYRHO Intracellular protease 1 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pfpI PE=1 SV=1
Length = 166
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
G P L E V SI +K S+G+ A IC P + L S G+L+G K T YP +
Sbjct: 70 GRAPERVRLNEKAV--SIARKMFSEGKPVASICHGP-QILISAGVLRGRKGTSYPGIKDD 126
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
+ A V++ V DG V+SR P + V+ L
Sbjct: 127 MINAGVEWVDAEVVVDGNWVSSRVPADLYAWMREFVKLL 165
>sp|Q9V1F8|PFPI_PYRAB Intracellular protease 1 OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pfpI PE=3 SV=1
Length = 166
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
G P L E V I KK S+G+ A IC P + L S G+L+G + T YP +
Sbjct: 70 GRAPERVRLNEKAV--EIAKKMFSEGKPVASICHGP-QILISAGVLRGRRGTSYPGIKDD 126
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
+ A V++ V DG V+SR P + V+ L
Sbjct: 127 MINAGVDWVDAEVVVDGNWVSSRVPGDLYAWMREFVKLL 165
>sp|Q58377|Y967_METJA Uncharacterized protein MJ0967 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0967 PE=3 SV=1
Length = 205
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPS--FM 58
GG+ L + L +VK+ + ++ + IC SP L G+LKG KAT YP+ +
Sbjct: 101 GGIGSKEYLWNNTKLIELVKEFYNKNKVVSAICLSPV-VLARAGILKGKKATVYPAPEAI 159
Query: 59 EQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
E+L A A + V DG V+T++ P F + +++ +
Sbjct: 160 EELKKAGAIYEDRGVVVDGNVITAKSPDYARLFGLEVLKAI 200
>sp|Q5JGM7|PFPI_PYRKO Intracellular protease 1 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfpI PE=3 SV=1
Length = 166
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
G P L E V +I KK DG+ A IC P + L S G+LKG K T + +
Sbjct: 70 GRAPEIVRLNEKAV--AITKKMFEDGKPVASICHGP-QILISAGVLKGRKGTSTVTIRDD 126
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
+ A A +++ V DG V+SR P + V+ L
Sbjct: 127 VKNAGAEWIDAEVVVDGNWVSSRHPGDLYAWMREFVKLL 165
>sp|Q51732|PFPI_PYRFU Intracellular protease 1 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pfpI PE=1 SV=1
Length = 166
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
G P L E V I +K ++G+ A IC P + L S G+LKG K T Y +
Sbjct: 70 GRAPERVRLNEKAV--EIARKMFTEGKPVATICHGP-QILISAGVLKGRKGTSYIGIRDD 126
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
+ A ++ V DG V+SR P + V+ L
Sbjct: 127 MINAGVEWIDREVVVDGNWVSSRHPGDLYAWMREFVKLL 165
>sp|Q10356|YDB3_SCHPO Uncharacterized protein C22E12.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC22E12.03c PE=1 SV=1
Length = 191
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 1 GGVPGATNLKESEVLESIVKK-QASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFME 59
GG GA L + ++ +VK+ + +ICA A S L + T +PS
Sbjct: 78 GGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTSG--LPNKQITGHPSVRG 135
Query: 60 QLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPL 112
QL ++ V + ++TS+GP T M F + L+EQ+ K++ + V L
Sbjct: 136 QLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDKYNAVYKSL 188
>sp|Q54MG7|PARK7_DICDI Protein DJ-1 OS=Dictyostelium discoideum GN=DDB_G0285969 PE=3 SV=1
Length = 205
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 1 GGVPGATNLKE--SEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFM 58
GG + +E SE + +++ S G+ A +C + A ALG G+LKG AT Y + +
Sbjct: 83 GGFENYSFYEEAYSEDVSQLIRDFDSKGKHIASVCVA-ALALGKSGILKGRNATTYRNSL 141
Query: 59 -------EQLAPACATTV-ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEV 108
+QL A + + + D V+TS P T A L+ +L + +A +V
Sbjct: 142 REHSVRQQQLRDFGANVIADQSIVIDKNVITSYNPQTAPYVAFELLSRLSDENKAKKV 199
>sp|Q49X39|HSLU_STAS1 ATP-dependent protease ATPase subunit HslU OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=hslU PE=3 SV=1
Length = 470
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 10 KESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTV 69
K SE+ + ++ Q D ++ + PA + G+L + M QL P V
Sbjct: 186 KRSEIKQQLLNGQLEDEKVRLKVEQDPA----AMGMLGTNQNQQMQDMMNQLMPK--KKV 239
Query: 70 ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFIDNV 120
E VP V T+R T EFA L++Q + A E++ + + FID +
Sbjct: 240 EREVP----VKTARKILTD-EFADELIDQETANQEAIELAEQMGIIFIDEI 285
>sp|P0A0K3|Y2013_STAA8 Uncharacterized protein SAOUHSC_02013 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_02013 PE=3 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|Q5HEP9|Y1933_STAAC Uncharacterized protein SACOL1933 OS=Staphylococcus aureus (strain
COL) GN=SACOL1933 PE=3 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|P0A0K0|Y1875_STAAM Uncharacterized protein SAV1875 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1875 PE=3 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|P0A0K2|Y1815_STAAW Uncharacterized protein MW1815 OS=Staphylococcus aureus (strain
MW2) GN=MW1815 PE=3 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|Q6G859|Y1797_STAAS Uncharacterized protein SAS1797 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1797 PE=3 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|P0A0K1|Y1692_STAAN Uncharacterized protein SA1692 OS=Staphylococcus aureus (strain
N315) GN=SA1692 PE=3 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|Q6GFI2|Y1965_STAAR Uncharacterized protein SAR1965 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1965 PE=3 SV=1
Length = 171
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 32 ICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEF 91
IC P + L LKG T + + L+ A A V+ V D +VTSR P +F
Sbjct: 104 ICHGP-QILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDF 162
Query: 92 AVALVEQL 99
+V+QL
Sbjct: 163 NREIVKQL 170
>sp|Q15942|ZYX_HUMAN Zyxin OS=Homo sapiens GN=ZYX PE=1 SV=1
Length = 572
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 28 LNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCT 87
V+CA P E S + + + C P + +Q AP C+ E +P+ G+ T R
Sbjct: 468 FTCVVCARPLEGT-SFIVDQANRPHCVPDYHKQYAPRCSVCSEPIMPEPGRDETVR---- 522
Query: 88 TMEFAVALVEQLYGK-ERADEVSGPLVVTFIDN 119
VAL + + K + ++ PL + DN
Sbjct: 523 ----VVALDKNFHMKCYKCEDCGKPLSIEADDN 551
>sp|O28987|Y1281_ARCFU Uncharacterized protein AF_1281 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1281 PE=3 SV=1
Length = 168
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQ 60
G P + E V IVK G+ A IC P + L S +KG + T + +
Sbjct: 70 GKSPERVRINERAV--EIVKDFLELGKPVAAICHGP-QLLISAMAVKGRRMTSWIGIRDD 126
Query: 61 LAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
L A A + V DG V+TSR P F L++ L
Sbjct: 127 LIAAGALYEDRPVVVDGNVITSRMPDDLPYFCGELIKIL 165
>sp|Q62523|ZYX_MOUSE Zyxin OS=Mus musculus GN=Zyx PE=1 SV=2
Length = 564
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 28 LNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCT 87
V+CA P E S + + + C P + +Q AP C+ E +P+ G+ T R
Sbjct: 460 FTCVVCACPLEGT-SFIVDQANQPHCVPDYHKQYAPRCSVCSEPIMPEPGRDETVR---- 514
Query: 88 TMEFAVALVEQLYGK-ERADEVSGPLVVTFIDN 119
VAL + + K + ++ PL + DN
Sbjct: 515 ----VVALDKNFHMKCYKCEDCGKPLSIEADDN 543
>sp|C4L690|GATA_EXISA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium
sp. (strain ATCC BAA-1283 / AT1b) GN=gatA PE=3 SV=1
Length = 480
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 47 KGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAV 93
KG++ TC +F+E PA TV R+ G + G EFA+
Sbjct: 82 KGMRTTCASTFLENFVPAHDATVVERLHDAGALTI--GKLNMDEFAM 126
>sp|Q3AKH0|GATA_SYNSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain CC9605) GN=gatA PE=3 SV=1
Length = 491
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 47 KGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAV 93
KG++ TC +EQ P +TV R+ Q G V+ G EFA+
Sbjct: 85 KGVRTTCSSRMLEQFVPPYESTVTERLWQAGGVLV--GKTNLDEFAM 129
>sp|Q17H91|GATA_AEDAE Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Aedes aegypti GN=gatA PE=3 SV=1
Length = 494
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 47 KGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQLYG--KER 104
KG+ TC +E P TV R+ ++G ++ + V+ ++G K
Sbjct: 85 KGIHTTCAARMLENFVPTYNATVYERLARNGAILVGKTNMDQYGMGSGTVDSIFGPTKNY 144
Query: 105 ADEVSG 110
D V G
Sbjct: 145 WDAVEG 150
>sp|Q55DM1|LVSA_DICDI BEACH domain-containing protein lvsA OS=Dictyostelium discoideum
GN=lvsA PE=4 SV=2
Length = 3619
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 19/67 (28%)
Query: 13 EVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESR 72
E+L ++KK+AS G N+ I + +G G C+TT+ SR
Sbjct: 1478 ELLAWVLKKKASLGLFNSNILELLFDLIGING-------------------NCSTTITSR 1518
Query: 73 VPQDGKV 79
PQ+G V
Sbjct: 1519 APQEGTV 1525
>sp|P33076|C2TA_HUMAN MHC class II transactivator OS=Homo sapiens GN=CIITA PE=1 SV=3
Length = 1130
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 14 VLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRV 73
+L+ + +A DG L++ +PAE RGLL GL F ++L C + +R
Sbjct: 497 ILDGFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGL-------FQKKLLRGCTLLLTAR- 548
Query: 74 PQDGKVVTS 82
P+ G++V S
Sbjct: 549 PR-GRLVQS 556
>sp|B5YFC6|TRMFO_DICT6 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
3960 / H-6-12) GN=trmFO PE=3 SV=1
Length = 439
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 71 SRVPQDGKVVTSRGPCTTMEFAVALVEQL 99
++P++G V+ + GP T+ +FA L+E L
Sbjct: 122 KKIPEEGIVIVATGPLTSSDFAEHLIEIL 150
>sp|Q2YU51|GATA_STAAB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=gatA PE=3 SV=1
Length = 485
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATT 68
+K+++ L+ + K DG+L + + + GL+ TC +E+ P +T
Sbjct: 52 IKKAQELDELQAKDQMDGKLFGIPMG-----IKDNIITNGLETTCASKMLEEFVPIYEST 106
Query: 69 VESRVPQDGKVVTSRGPCTTMEFAV 93
V ++ + V+ G EFA+
Sbjct: 107 VMEKLHNENAVLI--GKLNMDEFAM 129
>sp|A0RU64|GATA_CENSY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cenarchaeum
symbiosum (strain A) GN=gatA PE=3 SV=1
Length = 479
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATT 68
L E+ ++S +KK GR C A+ ++G++ TC +E T
Sbjct: 47 LDEARRIDSRIKKGEKVGR-----CLGAPIAVKDNICVRGMRTTCASKMLEGYESPYDAT 101
Query: 69 VESRVPQDGKVVTSRGPCTTMEFAVALVEQL--YGKER 104
V +R+ + ++T G EFA+ L + YG R
Sbjct: 102 VVTRLLAEDAIIT--GKTNMDEFAMGLTTEFSAYGPSR 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,616,549
Number of Sequences: 539616
Number of extensions: 1364174
Number of successful extensions: 2852
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2799
Number of HSP's gapped (non-prelim): 54
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)