Query 038375
Match_columns 121
No_of_seqs 105 out of 1073
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 17:52:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038375.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038375hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gdh_A DJ-1, uncharacterized p 100.0 7.6E-31 2.6E-35 182.8 10.7 113 1-115 81-194 (194)
2 4e08_A DJ-1 beta; flavodoxin-l 100.0 2.4E-30 8.3E-35 179.2 10.6 115 1-117 75-190 (190)
3 3mgk_A Intracellular protease/ 100.0 3E-30 1E-34 181.9 10.6 115 4-119 75-192 (211)
4 3ewn_A THIJ/PFPI family protei 100.0 5.1E-30 1.7E-34 185.2 11.8 118 1-119 92-209 (253)
5 3noq_A THIJ/PFPI family protei 100.0 6.5E-30 2.2E-34 182.4 12.0 115 3-118 74-188 (231)
6 2rk3_A Protein DJ-1; parkinson 100.0 7.7E-29 2.6E-33 172.5 11.7 116 1-117 74-190 (197)
7 3er6_A Putative transcriptiona 100.0 3.1E-29 1.1E-33 176.3 9.8 110 9-119 91-203 (209)
8 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 7.1E-29 2.4E-33 173.9 11.0 117 1-119 74-192 (205)
9 3gra_A Transcriptional regulat 100.0 3E-29 1E-33 175.6 9.0 106 13-119 88-195 (202)
10 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 6.4E-29 2.2E-33 174.5 9.8 115 1-117 79-195 (208)
11 4hcj_A THIJ/PFPI domain protei 100.0 4.5E-28 1.5E-32 166.9 11.6 99 1-101 77-175 (177)
12 3bhn_A THIJ/PFPI domain protei 100.0 2.6E-28 9E-33 174.7 9.5 115 1-118 88-203 (236)
13 2vrn_A Protease I, DR1199; cys 99.9 2.4E-27 8.3E-32 163.7 7.8 105 1-106 83-188 (190)
14 3l18_A Intracellular protease 99.9 1.6E-26 5.5E-31 156.8 8.4 95 4-99 73-167 (168)
15 3efe_A THIJ/PFPI family protei 99.9 5.5E-26 1.9E-30 160.0 8.8 109 8-119 87-199 (212)
16 3fse_A Two-domain protein cont 99.9 3E-26 1E-30 172.7 7.4 108 4-112 83-190 (365)
17 3cne_A Putative protease I; st 99.9 1.4E-25 4.7E-30 153.2 9.0 94 3-99 78-174 (175)
18 1oi4_A Hypothetical protein YH 99.9 2.4E-25 8.2E-30 154.6 9.6 98 1-100 94-192 (193)
19 3f5d_A Protein YDEA; unknow pr 99.9 2E-25 6.8E-30 156.8 8.5 108 4-118 73-185 (206)
20 1u9c_A APC35852; structural ge 99.9 6.9E-25 2.4E-29 154.9 8.8 102 1-103 97-224 (224)
21 3kkl_A Probable chaperone prot 99.9 3.8E-24 1.3E-28 153.8 9.9 103 1-104 106-240 (244)
22 2fex_A Conserved hypothetical 99.9 2.8E-24 9.7E-29 148.4 7.7 104 9-116 77-184 (188)
23 1rw7_A YDR533CP; alpha-beta sa 99.9 4E-24 1.4E-28 153.2 8.5 100 1-101 106-237 (243)
24 1n57_A Chaperone HSP31, protei 99.9 2.7E-23 9.2E-28 152.6 10.2 102 1-104 153-282 (291)
25 3n7t_A Macrophage binding prot 99.9 3.3E-23 1.1E-27 149.1 9.3 101 1-102 113-244 (247)
26 3uk7_A Class I glutamine amido 99.9 6E-23 2E-27 155.8 9.6 99 4-103 99-201 (396)
27 3uk7_A Class I glutamine amido 99.9 1.7E-22 5.8E-27 153.3 10.7 98 4-102 292-393 (396)
28 1vhq_A Enhancing lycopene bios 99.8 5.2E-21 1.8E-25 136.1 3.8 100 10-118 117-224 (232)
29 3l3b_A ES1 family protein; ssg 99.8 3.6E-19 1.2E-23 127.7 5.4 89 9-102 134-228 (242)
30 1sy7_A Catalase 1; heme oxidat 99.2 7.3E-12 2.5E-16 101.1 5.0 83 1-101 603-698 (715)
31 2iuf_A Catalase; oxidoreductas 98.4 3E-07 1E-11 74.0 6.4 41 6-47 612-652 (688)
32 3ttv_A Catalase HPII; heme ori 98.3 7.3E-07 2.5E-11 72.2 4.8 41 5-46 671-711 (753)
33 3ej6_A Catalase-3; heme, hydro 98.0 4.6E-06 1.6E-10 67.1 5.0 40 6-46 610-649 (688)
34 3d54_D Phosphoribosylformylgly 97.8 6.4E-06 2.2E-10 56.8 2.1 38 11-49 64-101 (213)
35 2nv0_A Glutamine amidotransfer 96.3 0.0011 3.7E-08 45.0 1.4 33 9-42 55-87 (196)
36 1q7r_A Predicted amidotransfer 96.1 0.0016 5.6E-08 45.1 1.1 33 9-42 77-109 (219)
37 2iss_D Glutamine amidotransfer 95.6 0.0031 1.1E-07 43.3 1.1 31 12-43 77-107 (208)
38 3l7n_A Putative uncharacterize 95.6 0.021 7.1E-07 39.9 5.2 30 13-43 71-100 (236)
39 2ywd_A Glutamine amidotransfer 95.5 0.0051 1.7E-07 41.3 1.7 36 7-43 54-90 (191)
40 2abw_A PDX2 protein, glutamina 94.9 0.02 6.7E-07 39.7 3.2 30 13-43 66-96 (227)
41 3ugj_A Phosphoribosylformylgly 94.8 0.035 1.2E-06 47.9 5.2 40 9-49 1118-1159(1303)
42 1wl8_A GMP synthase [glutamine 94.6 0.024 8.1E-07 38.1 3.0 30 12-42 58-87 (189)
43 1o1y_A Conserved hypothetical 94.4 0.036 1.2E-06 38.9 3.6 30 13-43 80-109 (239)
44 1qdl_B Protein (anthranilate s 94.3 0.029 9.8E-07 38.0 2.9 28 14-43 66-93 (195)
45 3m3p_A Glutamine amido transfe 94.2 0.047 1.6E-06 38.8 3.9 30 13-43 69-98 (250)
46 1ka9_H Imidazole glycerol phos 93.8 0.02 6.9E-07 38.8 1.3 30 13-43 62-91 (200)
47 2v4u_A CTP synthase 2; pyrimid 93.6 0.087 3E-06 38.0 4.5 29 13-42 106-134 (289)
48 3fij_A LIN1909 protein; 11172J 91.7 0.15 5.2E-06 35.9 3.5 32 11-43 93-124 (254)
49 1gpw_B Amidotransferase HISH; 91.6 0.089 3E-06 35.5 2.2 28 15-43 66-93 (201)
50 1a9x_B Carbamoyl phosphate syn 91.0 0.25 8.6E-06 37.2 4.3 31 11-42 246-276 (379)
51 2w7t_A CTP synthetase, putativ 88.9 0.36 1.2E-05 34.4 3.5 29 13-42 83-111 (273)
52 4gud_A Imidazole glycerol phos 88.8 0.1 3.5E-06 35.4 0.5 27 16-43 62-88 (211)
53 3l4e_A Uncharacterized peptida 88.7 0.19 6.6E-06 34.5 1.9 31 11-42 98-128 (206)
54 2a9v_A GMP synthase; structura 86.5 0.63 2.2E-05 31.8 3.5 27 13-43 75-101 (212)
55 1fy2_A Aspartyl dipeptidase; s 85.8 0.25 8.7E-06 34.3 1.1 31 11-42 98-128 (229)
56 2ywj_A Glutamine amidotransfer 85.6 0.32 1.1E-05 32.3 1.6 25 15-43 60-84 (186)
57 1i1q_B Anthranilate synthase c 85.1 0.78 2.7E-05 30.6 3.3 27 15-43 66-92 (192)
58 1l9x_A Gamma-glutamyl hydrolas 83.3 1 3.6E-05 32.7 3.5 28 14-42 110-139 (315)
59 3r75_A Anthranilate/para-amino 78.2 3 0.0001 33.5 4.8 28 14-42 509-536 (645)
60 1s1m_A CTP synthase; CTP synth 77.8 3 0.0001 32.9 4.6 29 13-42 359-387 (545)
61 1jvn_A Glutamine, bifunctional 74.2 1.7 5.8E-05 34.1 2.4 29 14-43 67-95 (555)
62 1vco_A CTP synthetase; tetrame 71.4 4.5 0.00015 31.9 4.2 29 13-42 371-399 (550)
63 3nva_A CTP synthase; rossman f 70.3 3.9 0.00013 32.2 3.6 30 12-42 365-394 (535)
64 3uow_A GMP synthetase; structu 70.0 3.8 0.00013 32.2 3.5 26 17-43 74-99 (556)
65 2vdj_A Homoserine O-succinyltr 69.2 2.8 9.6E-05 30.4 2.4 31 13-43 122-152 (301)
66 2h2w_A Homoserine O-succinyltr 68.3 3 0.0001 30.5 2.4 31 13-43 134-164 (312)
67 2vpi_A GMP synthase; guanine m 58.3 4.1 0.00014 27.8 1.5 22 20-42 90-111 (218)
68 3hrd_D Nicotinate dehydrogenas 50.5 3.9 0.00013 27.0 0.4 69 15-98 86-154 (160)
69 1ffv_A CUTS, iron-sulfur prote 47.9 3.4 0.00012 27.3 -0.3 70 15-99 86-155 (163)
70 3tqi_A GMP synthase [glutamine 47.8 3.5 0.00012 32.1 -0.2 26 17-43 73-98 (527)
71 3en0_A Cyanophycinase; serine 44.0 14 0.00047 26.6 2.4 31 10-41 128-159 (291)
72 1rm6_C 4-hydroxybenzoyl-COA re 36.4 4 0.00014 26.8 -1.3 66 20-100 90-155 (161)
73 2kw3_C Regulatory factor X-ass 34.7 25 0.00087 19.1 2.0 15 8-22 27-41 (62)
74 1n62_A Carbon monoxide dehydro 30.6 8.2 0.00028 25.5 -0.5 69 15-98 87-155 (166)
75 4dvc_A Thiol:disulfide interch 29.8 28 0.00095 21.9 2.0 30 72-101 153-182 (184)
76 1gpm_A GMP synthetase, XMP ami 29.4 21 0.00071 27.7 1.5 22 20-42 73-94 (525)
77 2ywb_A GMP synthase [glutamine 24.9 29 0.001 26.7 1.6 22 20-42 65-86 (503)
78 3gx8_A Monothiol glutaredoxin- 23.7 1.3E+02 0.0043 18.1 4.6 70 12-81 2-86 (121)
79 3rgo_A Protein-tyrosine phosph 23.5 72 0.0025 19.5 3.1 24 13-36 76-99 (157)
80 2nt2_A Protein phosphatase sli 23.1 75 0.0026 19.4 3.1 24 13-36 68-91 (145)
81 2rmf_A Urocortin, HUCN1; CRF l 21.9 81 0.0028 15.6 2.3 26 84-109 2-27 (40)
82 1t0c_A Insulin; type I beta-tu 21.8 27 0.00092 15.9 0.5 9 1-9 13-21 (31)
83 1zzw_A Dual specificity protei 21.5 84 0.0029 19.2 3.1 24 13-36 70-93 (149)
84 2lnd_A De novo designed protei 21.2 68 0.0023 18.7 2.3 26 10-35 35-60 (112)
85 2img_A Dual specificity protei 20.7 90 0.0031 18.8 3.1 23 14-36 77-99 (151)
No 1
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=99.97 E-value=7.6e-31 Score=182.81 Aligned_cols=113 Identities=27% Similarity=0.370 Sum_probs=105.4
Q ss_pred CCccchhCcccCHHHHHHHHHHHhC-CCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCe
Q 038375 1 GGVPGATNLKESEVLESIVKKQASD-GRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKV 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~-~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i 79 (121)
||.++++++..|+.+++||++++++ +|++++||+|+ +|+.+|+|+||++||||...+.+++.+++|+++++|+|||+
T Consensus 81 GG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~--~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~i 158 (194)
T 4gdh_A 81 GGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT--LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENL 158 (194)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG--HHHHHTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTE
T ss_pred CCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc--cchhhceecCCceEecCcHHHHHHhcCCeeecceEEEcCCE
Confidence 6777899999999999999999865 79999999985 57888999999999999999999887889999999999999
Q ss_pred EcCCChhhHHHHHHHHHHHhcCHHHHHHhhcccccc
Q 038375 80 VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVT 115 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~ 115 (121)
|||+|++++++|++++|++++|++.++++++.|++|
T Consensus 159 iTs~g~~~~~d~al~lve~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 159 ITSQGPGTAMLFGLKLLEQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp EEECSGGGHHHHHHHHHHHHSCHHHHHHHHHHTTCC
T ss_pred EECCCHhHHHHHHHHHHHHHcCHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999985
No 2
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=99.97 E-value=2.4e-30 Score=179.18 Aligned_cols=115 Identities=39% Similarity=0.660 Sum_probs=105.8
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhccccccccc-CcEEecCCe
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVE-SRVPQDGKV 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~-~~~v~dg~i 79 (121)
||.+++..+..|+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++ ++++++ +.+++|||+
T Consensus 75 GG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~-~~~~~~~~~~v~dg~i 152 (190)
T 4e08_A 75 GGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAP-TVLAKHGVASGKSLTSYPSMKPQLVN-NYSYVDDKTVVKDGNL 152 (190)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGGGGSSS-SSEECSSCSEEEETTE
T ss_pred CCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCCeEEeCcCHHHHHhc-CCcccCCCcEEEECCE
Confidence 454567778899999999999999999999999996 69999999999999999999999977 588885 789999999
Q ss_pred EcCCChhhHHHHHHHHHHHhcCHHHHHHhhcccccccc
Q 038375 80 VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFI 117 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~ 117 (121)
|||+|++++++|++++|++++|++.|+++++.|++++.
T Consensus 153 iTs~g~~a~~d~al~li~~~~g~~~a~~va~~l~~~~~ 190 (190)
T 4e08_A 153 ITSRGPGTAYEFALKIAEELAGKEKVQEVAKGLLVAYN 190 (190)
T ss_dssp EEECSGGGHHHHHHHHHHHHHCHHHHHHHHHHHTCCC-
T ss_pred EECCChHHHHHHHHHHHHHhcCHHHHHHHHHhhCcccC
Confidence 99999999999999999999999999999999999873
No 3
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=99.97 E-value=3e-30 Score=181.86 Aligned_cols=115 Identities=21% Similarity=0.366 Sum_probs=105.5
Q ss_pred cchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhccc--ccccc-cCcEEecCCeE
Q 038375 4 PGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPA--CATTV-ESRVPQDGKVV 80 (121)
Q Consensus 4 ~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~--g~~~~-~~~~v~dg~i~ 80 (121)
.++..+..|+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. ++++. ++.+|+|||+|
T Consensus 75 ~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~-~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~ii 153 (211)
T 3mgk_A 75 SGTREKVNDDNFINFIGNMVKESKYIISVCTGS-ALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIY 153 (211)
T ss_dssp THHHHHTTCHHHHHHHHHHHHHCSEEEECTTHH-HHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEE
T ss_pred cchhhhcCCHHHHHHHHHHHHcCCEEEEEchHH-HHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEE
Confidence 567778889999999999999999999999986 799999999999999999999999876 34554 56899999999
Q ss_pred cCCChhhHHHHHHHHHHHhcCHHHHHHhhccccccccCC
Q 038375 81 TSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFIDN 119 (121)
Q Consensus 81 T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~~ 119 (121)
||+|+++++||++++|++++|++.|+++++.|++++.++
T Consensus 154 Ts~G~~a~~dlal~lv~~~~G~~~A~~va~~l~~~~~r~ 192 (211)
T 3mgk_A 154 TSSGVSAGIDMTLGFIEDLIGKEKALEISRSIEYFWNED 192 (211)
T ss_dssp EECSHHHHHHHHHHHHHHHHCHHHHHHHHHHHTCCCCCC
T ss_pred ECCCHHHHHHHHHHHHHHHhCHHHHHHHHHhcEECCcCC
Confidence 999999999999999999999999999999999998764
No 4
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=99.97 E-value=5.1e-30 Score=185.23 Aligned_cols=118 Identities=24% Similarity=0.293 Sum_probs=108.3
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeE
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVV 80 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~ 80 (121)
||.+|+..+..|+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|+..+..++++.+|+|||+|
T Consensus 92 GG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~-~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~ii 170 (253)
T 3ewn_A 92 GGTDGTLAAASDAETLAFMADRGARAKYITSVCSGS-LILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRDRNRI 170 (253)
T ss_dssp CBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHH-HHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEETTEE
T ss_pred CCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHH-HHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEECCEE
Confidence 454377788899999999999999999999999986 7999999999999999999999997656667788999999999
Q ss_pred cCCChhhHHHHHHHHHHHhcCHHHHHHhhccccccccCC
Q 038375 81 TSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFIDN 119 (121)
Q Consensus 81 T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~~ 119 (121)
||+|+++++||+++||++++|++.|+++++.|++++++-
T Consensus 171 Ts~G~~a~idlaL~lv~~l~G~~~A~~va~~l~~~~~~p 209 (253)
T 3ewn_A 171 TGAGVTAGLDFGLSMVAELRDQTYAECAQLMSEYDPDPP 209 (253)
T ss_dssp EECSTTHHHHHHHHHHHHHSCHHHHHHHHHHTTCCCCCS
T ss_pred ECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhcccCCCCC
Confidence 999999999999999999999999999999999998753
No 5
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=99.97 E-value=6.5e-30 Score=182.41 Aligned_cols=115 Identities=29% Similarity=0.397 Sum_probs=107.0
Q ss_pred ccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcC
Q 038375 3 VPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTS 82 (121)
Q Consensus 3 ~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~ 82 (121)
+.++..+..|+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.+++.+..++++.+|+|||+|||
T Consensus 74 G~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~-~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs 152 (231)
T 3noq_A 74 GTGVGALMEDPQALAFIRQQAARARYVTSVSTGS-LVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTG 152 (231)
T ss_dssp STTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHH-HHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEE
T ss_pred CCChhhhccCHHHHHHHHHHHhcCCEEEEECHHH-HHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEEC
Confidence 3677778899999999999999999999999985 799999999999999999999999765666678899999999999
Q ss_pred CChhhHHHHHHHHHHHhcCHHHHHHhhccccccccC
Q 038375 83 RGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFID 118 (121)
Q Consensus 83 ~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~ 118 (121)
+|+++++||++++|++++|++.++++++.|++++++
T Consensus 153 ~G~~a~~d~aL~li~~~~G~~~A~~va~~l~~~~~~ 188 (231)
T 3noq_A 153 GGITAGIDFALTLAAELFDAATAQRVQLQLEYAPAP 188 (231)
T ss_dssp CSTTHHHHHHHHHHHHHSCHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHHHHHHHcCHHHHHHHHHhceeCCCC
Confidence 999999999999999999999999999999999875
No 6
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=99.96 E-value=7.7e-29 Score=172.46 Aligned_cols=116 Identities=43% Similarity=0.584 Sum_probs=102.9
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccc-cccccCcEEecCCe
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPAC-ATTVESRVPQDGKV 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g-~~~~~~~~v~dg~i 79 (121)
||..++..+..++.+++||+++++++|+|++||+|+ ++|+++|+|+||++|+||...+.+++.+ +++.++.+++|||+
T Consensus 74 GG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~i 152 (197)
T 2rk3_A 74 GGNLGAQNLSESAAVKEILKEQENRKGLIATICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLI 152 (197)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEETTE
T ss_pred CCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEeCCE
Confidence 454456678889999999999999999999999996 6999999999999999999999997643 34677899999999
Q ss_pred EcCCChhhHHHHHHHHHHHhcCHHHHHHhhcccccccc
Q 038375 80 VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFI 117 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~ 117 (121)
|||+|+.++++|++++|++++|++.|+++++.|+++.-
T Consensus 153 iTs~g~~a~~d~al~li~~l~g~~~a~~va~~~~~~~~ 190 (197)
T 2rk3_A 153 LTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLKDL 190 (197)
T ss_dssp EEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGGTC---
T ss_pred EECCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999988753
No 7
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=99.96 E-value=3.1e-29 Score=176.34 Aligned_cols=110 Identities=19% Similarity=0.180 Sum_probs=97.5
Q ss_pred cccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhccc--ccccccC-cEEecCCeEcCCCh
Q 038375 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPA--CATTVES-RVPQDGKVVTSRGP 85 (121)
Q Consensus 9 l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~--g~~~~~~-~~v~dg~i~T~~g~ 85 (121)
+..|+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. ++++.++ .+++|||+|||+|+
T Consensus 91 ~~~~~~l~~~l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~ 169 (209)
T 3er6_A 91 DKIDPALFDWIRELHLKGSKIVAIDTGI-FVVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGNVYLSSGP 169 (209)
T ss_dssp GGSCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEETTEEEECCS
T ss_pred ccCCHHHHHHHHHHHhcCCEEEEEcHHH-HHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEeCCEEECCcH
Confidence 4679999999999999999999999986 799999999999999999999999765 4556554 69999999999999
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHhhccccccccCC
Q 038375 86 CTTMEFAVALVEQLYGKERADEVSGPLVVTFIDN 119 (121)
Q Consensus 86 ~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~~ 119 (121)
++++||++++|++++|++.|+++++.|++++++.
T Consensus 170 ~a~~dlal~li~~~~G~~~A~~va~~l~~~~~~~ 203 (209)
T 3er6_A 170 YSHSSVMLEIVEEYFGKHTRNLGNQFLSTIESEG 203 (209)
T ss_dssp SCCHHHHHHHHHHHHCHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHhccCcccc
Confidence 9999999999999999999999999999998764
No 8
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=99.96 E-value=7.1e-29 Score=173.87 Aligned_cols=117 Identities=32% Similarity=0.547 Sum_probs=106.2
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCe-
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKV- 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i- 79 (121)
||..++.++..++.+++||+++++++|+|++||+|++++|+++|+|+||++|+||...+.+.+ +++.++++++|||+
T Consensus 74 GG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~--~~~~~~~vv~Dg~i~ 151 (205)
T 2ab0_A 74 GGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPA--EQWLDKRVVWDARVK 151 (205)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCT--TTBCCCSEEEETTTT
T ss_pred CCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccC--CEEecCCEEEeCCcC
Confidence 454457778889999999999999999999999996369999999999999999998887754 56788889999999
Q ss_pred -EcCCChhhHHHHHHHHHHHhcCHHHHHHhhccccccccCC
Q 038375 80 -VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFIDN 119 (121)
Q Consensus 80 -~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~~ 119 (121)
|||+|++++++|++++|+++.|.+.++++++.|++++.|.
T Consensus 152 viTs~g~~s~~d~al~li~~l~g~~~a~~va~~l~~~~~r~ 192 (205)
T 2ab0_A 152 LLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIY 192 (205)
T ss_dssp EEEECSGGGHHHHHHHHHHHHTCHHHHHHHHTTTTCCTTSC
T ss_pred eEECcChhhHHHHHHHHHHHhcChHHHHHHHHhcccCCCCC
Confidence 9999999999999999999999999999999999998765
No 9
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=99.96 E-value=3e-29 Score=175.64 Aligned_cols=106 Identities=20% Similarity=0.258 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhccc--ccccccCcEEecCCeEcCCChhhHHH
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPA--CATTVESRVPQDGKVVTSRGPCTTME 90 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~--g~~~~~~~~v~dg~i~T~~g~~~~~~ 90 (121)
+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. ++++.++.+++|||+|||+|+++++|
T Consensus 88 ~~l~~~l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~iiTs~G~~a~~d 166 (202)
T 3gra_A 88 PELDRLLNDCAAHGMALGGLWNGA-WFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAME 166 (202)
T ss_dssp TTHHHHHHHHHHHTCEEEEETTHH-HHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEEEESSHHHHHH
T ss_pred HHHHHHHHHHHhhCCEEEEECHHH-HHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEEECCCHHHHHH
Confidence 899999999999999999999986 799999999999999999999999765 45677788999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHhhccccccccCC
Q 038375 91 FAVALVEQLYGKERADEVSGPLVVTFIDN 119 (121)
Q Consensus 91 ~a~~li~~~~~~~~a~~v~~~l~~~~~~~ 119 (121)
|++++|++++|++.|+++++.|++++.+.
T Consensus 167 lal~li~~~~G~~~A~~va~~l~~~~~~~ 195 (202)
T 3gra_A 167 LMLGLVRRLYGDGLAEGVEEILSFSGARE 195 (202)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHC------
T ss_pred HHHHHHHHHhCHHHHHHHHHHhCcCcccc
Confidence 99999999999999999999999998764
No 10
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=99.96 E-value=6.4e-29 Score=174.52 Aligned_cols=115 Identities=33% Similarity=0.573 Sum_probs=103.2
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEec--CC
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQD--GK 78 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~d--g~ 78 (121)
||.+++..+..|+.+++||+++++++|+|++||+|++++|+++|||+||++|+||...+.+.+ .++.++++++| ||
T Consensus 79 GG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~~--~~~~~~~vv~d~dg~ 156 (208)
T 3ot1_A 79 GGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIPS--ERLSRQRVCYYATQH 156 (208)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSCT--TTBCCSSEEEEGGGT
T ss_pred CCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHccC--CccccCcEEEeCCCC
Confidence 454567778899999999999999999999999986369999999999999999999888843 67888888875 59
Q ss_pred eEcCCChhhHHHHHHHHHHHhcCHHHHHHhhcccccccc
Q 038375 79 VVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFI 117 (121)
Q Consensus 79 i~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~ 117 (121)
+|||+|++++++|++++|++++|++.++++++.|++++.
T Consensus 157 iiTs~g~~a~~d~al~lv~~l~G~~~a~~va~~l~~~~~ 195 (208)
T 3ot1_A 157 LLTSQGPGTALEFALAMIALLAGVELAQHVAAPMVLHPQ 195 (208)
T ss_dssp EEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGGTCCHH
T ss_pred EEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhheeCCC
Confidence 999999999999999999999999999999999998654
No 11
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=99.95 E-value=4.5e-28 Score=166.89 Aligned_cols=99 Identities=22% Similarity=0.332 Sum_probs=93.3
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeE
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVV 80 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~ 80 (121)
|| .|+.++..|+.+++||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.+++.|++|+++++|+|||+|
T Consensus 77 GG-~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~-~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~li 154 (177)
T 4hcj_A 77 GG-IGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGV-VIMANAKILEEINVTCLSADESHVRHGNANIMSENVVVSGNIV 154 (177)
T ss_dssp CS-GGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEE
T ss_pred CC-ccHHHHhhCHHHHHHHHHHHHhCCEEEEecccH-HHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEEEECCEE
Confidence 44 678899999999999999999999999999997 6999999999999999999999998878899999999999999
Q ss_pred cCCChhhHHHHHHHHHHHhcC
Q 038375 81 TSRGPCTTMEFAVALVEQLYG 101 (121)
Q Consensus 81 T~~g~~~~~~~a~~li~~~~~ 101 (121)
|++|+.++.+|++++|+.|.+
T Consensus 155 Ts~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 155 TANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp EECSGGGHHHHHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999865
No 12
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.95 E-value=2.6e-28 Score=174.71 Aligned_cols=115 Identities=23% Similarity=0.272 Sum_probs=104.2
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCC-eEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCe
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGR-LNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKV 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~-~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i 79 (121)
||.+++..+..|+.+++|| ++++++ +|++||+|+ ++|+++|||+||++|+||...+.|++.+..+.++.+|+|||+
T Consensus 88 GG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~-~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~i 164 (236)
T 3bhn_A 88 SGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGS-FVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNI 164 (236)
T ss_dssp CCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHH-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEETTE
T ss_pred CCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHH-HHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeCCE
Confidence 3435677788899999999 556666 999999996 699999999999999999999999887777788899999999
Q ss_pred EcCCChhhHHHHHHHHHHHhcCHHHHHHhhccccccccC
Q 038375 80 VTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFID 118 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~ 118 (121)
|||+|+++++||++++|++++|++.++++++.|++++.+
T Consensus 165 iTs~G~~a~~dlal~lIe~l~G~~~A~~va~~l~~~~~~ 203 (236)
T 3bhn_A 165 ATAGGCLSLLYLVGWLAERLFDSVKRKQIQNQLIPAGQM 203 (236)
T ss_dssp EEECSGGGHHHHHHHHHHHHSCHHHHHHHHTTTSCTTCH
T ss_pred EECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999875
No 13
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=99.94 E-value=2.4e-27 Score=163.74 Aligned_cols=105 Identities=30% Similarity=0.422 Sum_probs=94.0
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeE
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVV 80 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~ 80 (121)
||..++..+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++.+..++++++++|||+|
T Consensus 83 GG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~-~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~ii 161 (190)
T 2vrn_A 83 GGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGP-WSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVV 161 (190)
T ss_dssp CCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTT-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEE
T ss_pred CCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhH-HHHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEE
Confidence 454467777889999999999999999999999996 6999999999999999999999998877888888888899999
Q ss_pred cCCChhhHHHHHHHHHHHh-cCHHHHH
Q 038375 81 TSRGPCTTMEFAVALVEQL-YGKERAD 106 (121)
Q Consensus 81 T~~g~~~~~~~a~~li~~~-~~~~~a~ 106 (121)
||+|+.++.+|++++|+++ .|++.|+
T Consensus 162 Ts~g~~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 162 TSRKPDDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp ECSSGGGHHHHHHHHHHHHHHCCCGGG
T ss_pred EcCChhhHHHHHHHHHHHHhccccccc
Confidence 9999999999999999999 8886654
No 14
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=99.93 E-value=1.6e-26 Score=156.83 Aligned_cols=95 Identities=25% Similarity=0.322 Sum_probs=88.6
Q ss_pred cchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcCC
Q 038375 4 PGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSR 83 (121)
Q Consensus 4 ~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~~ 83 (121)
.++..+..++.+++||+++++++|+|++||+|+ ++|+++|+|+||++|+||...+.+++.+.+++++.+++|||+|||+
T Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~ 151 (168)
T 3l18_A 73 KAPEIVRLNEKAVMITRRMFEDDKPVASICHGP-QILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSR 151 (168)
T ss_dssp SHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEEC
T ss_pred cCHHHhccCHHHHHHHHHHHHCCCEEEEECHhH-HHHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcC
Confidence 467777889999999999999999999999996 6999999999999999999999998877778888999999999999
Q ss_pred ChhhHHHHHHHHHHHh
Q 038375 84 GPCTTMEFAVALVEQL 99 (121)
Q Consensus 84 g~~~~~~~a~~li~~~ 99 (121)
|+.++.+|++++|+.+
T Consensus 152 g~~~~~d~~l~li~~l 167 (168)
T 3l18_A 152 HPGDLYAWMREFVKLL 167 (168)
T ss_dssp SGGGHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHhh
Confidence 9999999999999876
No 15
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=99.93 E-value=5.5e-26 Score=159.99 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=96.6
Q ss_pred CcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCc-chHHhhccc--c-cccccCcEEecCCeEcCC
Q 038375 8 NLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYP-SFMEQLAPA--C-ATTVESRVPQDGKVVTSR 83 (121)
Q Consensus 8 ~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~-~~~~~l~~~--g-~~~~~~~~v~dg~i~T~~ 83 (121)
.+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+|| .+.+.+++. + ..+.++.+|+|||+|||+
T Consensus 87 ~~~~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg~iiTs~ 165 (212)
T 3efe_A 87 SEEIHQPILERIGQALKIGTIVAAICGAT-DALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDANLVTAS 165 (212)
T ss_dssp TSGGGHHHHHHHHHHHHHTCEEEEETHHH-HHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEETTEEEEC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEcHHH-HHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCCcEEEECCEEECC
Confidence 35789999999999999999999999986 799999999999999996 777777653 2 245678999999999999
Q ss_pred ChhhHHHHHHHHHHHhcCHHHHHHhhccccccccCC
Q 038375 84 GPCTTMEFAVALVEQLYGKERADEVSGPLVVTFIDN 119 (121)
Q Consensus 84 g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~~ 119 (121)
|++ ++||++++|+++.+. .++++++.+++.+.++
T Consensus 166 G~~-~~d~al~li~~l~g~-~a~~va~~~~~~~~g~ 199 (212)
T 3efe_A 166 GIA-PLEFAMEVLKKIDVF-TLDALHSWYNLNKTHK 199 (212)
T ss_dssp TTC-HHHHHHHHHHHHTCS-CHHHHHHHHHHHHHCC
T ss_pred Cch-HHHHHHHHHHHhcCC-CHHHHHHHHHHHcCCC
Confidence 986 899999999999997 9999999999987664
No 16
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.93 E-value=3e-26 Score=172.73 Aligned_cols=108 Identities=21% Similarity=0.346 Sum_probs=100.2
Q ss_pred cchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcCC
Q 038375 4 PGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSR 83 (121)
Q Consensus 4 ~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~~ 83 (121)
.++..+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++.++++.+..+|+|||+|||+
T Consensus 83 ~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~-~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~ 161 (365)
T 3fse_A 83 MAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGP-QVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSR 161 (365)
T ss_dssp THHHHHTTCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEEC
T ss_pred cchhhccCCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECC
Confidence 467778899999999999999999999999996 7999999999999999999999998777888888999999999999
Q ss_pred ChhhHHHHHHHHHHHhcCHHHHHHhhccc
Q 038375 84 GPCTTMEFAVALVEQLYGKERADEVSGPL 112 (121)
Q Consensus 84 g~~~~~~~a~~li~~~~~~~~a~~v~~~l 112 (121)
|+.++++|++++|+.+.+.+.++++++.+
T Consensus 162 G~~a~~d~al~lIe~L~g~~~A~~lA~~~ 190 (365)
T 3fse_A 162 EPGDLAIFTTAILSRLGYGGKDAALPDEK 190 (365)
T ss_dssp SGGGHHHHHHHHHHHTTCCCSSSCCCCTT
T ss_pred CHHHHHHHHHHHHHHhcCchHHHHHhhhh
Confidence 99999999999999999998888887654
No 17
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.92 E-value=1.4e-25 Score=153.22 Aligned_cols=94 Identities=19% Similarity=0.262 Sum_probs=86.5
Q ss_pred ccchhCcc---cCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCe
Q 038375 3 VPGATNLK---ESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKV 79 (121)
Q Consensus 3 ~~g~~~l~---~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i 79 (121)
.+++..+. .++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++ ..+.++.+++|||+
T Consensus 78 ~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGlL~G~~~T~~~~~~~~l~~--~~~~~~~~v~Dg~i 154 (175)
T 3cne_A 78 VPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGA-MMFDFTGITKGKKVAVHPLAKPAIQN--GIATDEKSEIDGNF 154 (175)
T ss_dssp GGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHH-HHHHHTTTTTTCEEECCGGGGGGCCS--SEEESSSEEEETTE
T ss_pred cccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCCEEEeCccHHHHhhc--CEEeCCCEEEeCCE
Confidence 34677676 78999999999999999999999996 69999999999999999999999976 67788899999999
Q ss_pred EcCCChhhHHHHHHHHHHHh
Q 038375 80 VTSRGPCTTMEFAVALVEQL 99 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~ 99 (121)
|||+|+.++++|++++|+++
T Consensus 155 iTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 155 FTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp EEESSGGGGGGTHHHHHHHH
T ss_pred EeCCChHHHHHHHHHHHHHh
Confidence 99999999999999999986
No 18
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.92 E-value=2.4e-25 Score=154.60 Aligned_cols=98 Identities=23% Similarity=0.312 Sum_probs=90.2
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCC-e
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGK-V 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~-i 79 (121)
|| .++..+..++.+++||+++++++++|++||+|+ ++|+++|+|+||++|+||...+.|++.+++++++++++||| +
T Consensus 94 GG-~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~-~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~i 171 (193)
T 1oi4_A 94 GG-HSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGP-QLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQL 171 (193)
T ss_dssp CB-THHHHHTTSHHHHHHHHHHHHTTCCEEEETTTH-HHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTTE
T ss_pred CC-cCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCEEEECCEE
Confidence 44 567777789999999999999999999999996 69999999999999999999999987788888888999999 9
Q ss_pred EcCCChhhHHHHHHHHHHHhc
Q 038375 80 VTSRGPCTTMEFAVALVEQLY 100 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~ 100 (121)
|||+|+.++.+|++++|+++.
T Consensus 172 iTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 172 VTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp EEESSGGGHHHHHHHHHHHHC
T ss_pred EECCCcchHHHHHHHHHHHhh
Confidence 999999999999999999874
No 19
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.92 E-value=2e-25 Score=156.81 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=92.8
Q ss_pred cchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhc---c--cccccccCcEEecCC
Q 038375 4 PGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLA---P--ACATTVESRVPQDGK 78 (121)
Q Consensus 4 ~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~---~--~g~~~~~~~~v~dg~ 78 (121)
.++.. .|+.+++||+++++++++|++||+|+ ++|+++|||+||++|+||. +.++ . .++++.++.+|+|||
T Consensus 73 ~~~~~--~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGLL~Gr~aTthw~--~~~~~~~~~~~~~~~~~~~~V~Dg~ 147 (206)
T 3f5d_A 73 DSWSN--DNKKLLHFVKTAFQKNIPIAAICGAV-DFLAKNGLLNNHSHTGNFV--YLWKDYKQYKPISSFVEKQAVRDKN 147 (206)
T ss_dssp SCCCC--CCHHHHHHHHHHHHTTCCEEEETHHH-HHHHHTTTTTTSCBCCSCG--GGGTTCTTCCCSSCBCCSSEEEETT
T ss_pred CChhh--cCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHcCCCCCCEEEccCH--HHhhhhHhhcCCCeEccCCEEEECC
Confidence 45554 89999999999999999999999986 7999999999999999984 2332 1 156778889999999
Q ss_pred eEcCCChhhHHHHHHHHHHHhcCHHHHHHhhccccccccC
Q 038375 79 VVTSRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFID 118 (121)
Q Consensus 79 i~T~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~ 118 (121)
+|||+|++ ++||++++|+.+. .+.++++++.|++.+.+
T Consensus 148 iiTs~G~a-~id~al~li~~l~-~~~a~~va~~~~~~~~g 185 (206)
T 3f5d_A 148 LVTANGTA-PIEFTNLILEMID-FDTPENIEKMMYMNRYG 185 (206)
T ss_dssp EEEECTTC-HHHHHHHHHHHTT-CSCHHHHHHHHHHHHHC
T ss_pred EEECCCch-HHHHHHHHHHHhC-cchHHHHHHHhhhhhcc
Confidence 99999986 8999999999765 68999999999988753
No 20
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.91 E-value=6.9e-25 Score=154.94 Aligned_cols=102 Identities=26% Similarity=0.416 Sum_probs=87.9
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcC------CCCCCeeecCcchHH---------------
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRG------LLKGLKATCYPSFME--------------- 59 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aG------ll~g~~~t~~~~~~~--------------- 59 (121)
||.....++..++.+++||+++++++|+|++||+|+ ++|+++| ||+||++|+||...+
T Consensus 97 GG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~-~~La~ag~~~g~~lL~Gr~~T~~~~~~~~~~~~~~~~p~~~~~ 175 (224)
T 1u9c_A 97 GGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGP-SGLVNATYKDGTPIVKGKTVTSFTDEEEREVGLDVHMPFLLES 175 (224)
T ss_dssp CCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTSCBTTTTCEECCSCHHHHHHHTCGGGSSSCHHH
T ss_pred CCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHH-HHHHHccccCCCceecCcEEecCCCHHHhhccccccCCccHHH
Confidence 454434568889999999999999999999999997 6999999 999999999998655
Q ss_pred hhcccccccccCc-----EEecCCeEcCCChhhHHHHHHHHHHHhcCHH
Q 038375 60 QLAPACATTVESR-----VPQDGKVVTSRGPCTTMEFAVALVEQLYGKE 103 (121)
Q Consensus 60 ~l~~~g~~~~~~~-----~v~dg~i~T~~g~~~~~~~a~~li~~~~~~~ 103 (121)
.|++.++++++.+ +|+|||+|||+|++++++|++++|+++.|++
T Consensus 176 ~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~~ 224 (224)
T 1u9c_A 176 TLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEERE 224 (224)
T ss_dssp HHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhccC
Confidence 3555567777665 9999999999999999999999999998863
No 21
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.91 E-value=3.8e-24 Score=153.78 Aligned_cols=103 Identities=22% Similarity=0.298 Sum_probs=88.2
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhc-------CCCCCCeeecCcchHH--------------
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSR-------GLLKGLKATCYPSFME-------------- 59 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a-------Gll~g~~~t~~~~~~~-------------- 59 (121)
||.+++.++..|+.+++||+++++++|+|++||+|+ ++|+++ |+|+||++|+||...+
T Consensus 106 GG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~-~~La~a~~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~ 184 (244)
T 3kkl_A 106 AGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGP-LLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKL 184 (244)
T ss_dssp CSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTTSSBTTTTCEECCSCHHHHHHHTTHHHHHHTTC
T ss_pred CCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHhhccccCCceeCCceecCCCcHHHHhhhhhhhcccccc
Confidence 565555788899999999999999999999999998 589998 9999999999998643
Q ss_pred -----hhccccccccc------CcEEecCCeEcCCChhhHHHHHHHHHHHhcCHHH
Q 038375 60 -----QLAPACATTVE------SRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKER 104 (121)
Q Consensus 60 -----~l~~~g~~~~~------~~~v~dg~i~T~~g~~~~~~~a~~li~~~~~~~~ 104 (121)
.+++.|+.|++ +.+|+|||+||++|+.++.+|++++|+.+.+.+.
T Consensus 185 ~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~~ 240 (244)
T 3kkl_A 185 TTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVEH 240 (244)
T ss_dssp CCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC---
T ss_pred ccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhhh
Confidence 44455777876 4799999999999999999999999999998654
No 22
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.90 E-value=2.8e-24 Score=148.37 Aligned_cols=104 Identities=27% Similarity=0.310 Sum_probs=89.2
Q ss_pred cccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhccc--cc-ccccCc-EEecCCeEcCCC
Q 038375 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPA--CA-TTVESR-VPQDGKVVTSRG 84 (121)
Q Consensus 9 l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~--g~-~~~~~~-~v~dg~i~T~~g 84 (121)
+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||.....+++. +. .+.++. +|+|||+||++|
T Consensus 77 ~~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g 155 (188)
T 2fex_A 77 KGTAADLGGLVKRFRDRDRLVAGICAAA-SALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAG 155 (188)
T ss_dssp HTCCCCCHHHHHHHHHTTCEEEEETHHH-HHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECT
T ss_pred ccccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCC
Confidence 4578999999999999999999999996 699999999999999999876666543 23 466778 999999999999
Q ss_pred hhhHHHHHHHHHHHhcCHHHHHHhhccccccc
Q 038375 85 PCTTMEFAVALVEQLYGKERADEVSGPLVVTF 116 (121)
Q Consensus 85 ~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~ 116 (121)
++ +++|++++|+++.+.+.++ ++.+.+..
T Consensus 156 ~~-~~d~al~lv~~l~~~~~~~--~~~~~~~~ 184 (188)
T 2fex_A 156 SA-PVSFAVEILKSLGLFGPEA--EAELQIFA 184 (188)
T ss_dssp TC-HHHHHHHHHHHTTCCSHHH--HHHHGGGG
T ss_pred cc-HHHHHHHHHHHccCCCHHH--HHHHHHHH
Confidence 86 8999999999999988876 66665544
No 23
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.90 E-value=4e-24 Score=153.20 Aligned_cols=100 Identities=20% Similarity=0.303 Sum_probs=86.5
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcC-------CCCCCeeecCcchHHh-------------
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRG-------LLKGLKATCYPSFMEQ------------- 60 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aG-------ll~g~~~t~~~~~~~~------------- 60 (121)
||..++.++..|+.+++||+++++++++|++||+|+ ++|+++| ||+||++|+||...+.
T Consensus 106 GG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~-~~La~ag~~~~g~~lL~G~~~T~~~~~~e~~~~~~~~~p~~~~ 184 (243)
T 1rw7_A 106 AGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGP-AIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNL 184 (243)
T ss_dssp CSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTTSSBTTTTCEECCSCHHHHHHTTCHHHHHHTTC
T ss_pred CCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCH-HHHHhcCcccCCceeeCCcEEeecCCHHHhhcccccccccccc
Confidence 554556678889999999999999999999999997 5999999 9999999999986554
Q ss_pred ------hcccccccc------cCcEEecCCeEcCCChhhHHHHHHHHHHHhcC
Q 038375 61 ------LAPACATTV------ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYG 101 (121)
Q Consensus 61 ------l~~~g~~~~------~~~~v~dg~i~T~~g~~~~~~~a~~li~~~~~ 101 (121)
+++.|+.++ +..+|+|||+|||+|+.++++|++++|+++..
T Consensus 185 ~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 185 ATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp CCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred ccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 444467777 66799999999999999999999999998753
No 24
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.89 E-value=2.7e-23 Score=152.62 Aligned_cols=102 Identities=21% Similarity=0.373 Sum_probs=88.2
Q ss_pred CCccchh-CcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhc----CCCCCCeeecCcchHHhhcc------------
Q 038375 1 GGVPGAT-NLKESEVLESIVKKQASDGRLNAVICASPAEALGSR----GLLKGLKATCYPSFMEQLAP------------ 63 (121)
Q Consensus 1 gG~~g~~-~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a----Gll~g~~~t~~~~~~~~l~~------------ 63 (121)
|| .|+. .+..|+.+++||+++++++++|++||+|+ ++|+++ |||+||++|+||...+.++.
T Consensus 153 GG-~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp-~~La~a~~~~GLL~Gr~~Tt~~~~~e~~~~~~~~~~~~~P~~ 230 (291)
T 1n57_A 153 GG-HGALIGLPESQDVAAALQWAIKNDRFVISLCHGP-AAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWY 230 (291)
T ss_dssp CS-GGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGGGGTTSCCTTTTCEECCCCGGGGGTTTTTTSSSSCCSSC
T ss_pred CC-cchhhhhhhCHHHHHHHHHHHHcCCEEEEECccH-HHHHhhcccCccCCCCEEEeCCCHHHhhhccccccccccchh
Confidence 44 5555 78899999999999999999999999997 477777 59999999999998877632
Q ss_pred -------cccccc----cCcEEecCCeEcCCChhhHHHHHHHHHHHhcCHHH
Q 038375 64 -------ACATTV----ESRVPQDGKVVTSRGPCTTMEFAVALVEQLYGKER 104 (121)
Q Consensus 64 -------~g~~~~----~~~~v~dg~i~T~~g~~~~~~~a~~li~~~~~~~~ 104 (121)
.|+.++ +..+|+|||+|||+|+.++++|++++|+.+.+.+.
T Consensus 231 le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~ 282 (291)
T 1n57_A 231 FGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYA 282 (291)
T ss_dssp HHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchh
Confidence 256777 67899999999999999999999999999998654
No 25
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.89 E-value=3.3e-23 Score=149.11 Aligned_cols=101 Identities=21% Similarity=0.281 Sum_probs=86.5
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhc------CCCCCCeeecCcchHHh--------------
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSR------GLLKGLKATCYPSFMEQ-------------- 60 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a------Gll~g~~~t~~~~~~~~-------------- 60 (121)
||...+.++..++.+++||+++++++|+|++||+|+ ++|+++ |+|+||++|+||...+.
T Consensus 113 GG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp-~~La~a~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~ 191 (247)
T 3n7t_A 113 GGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGP-AMLPGIHDENGDSVIKDKTVTGFTTKGEIMIKVIDKMREDHLH 191 (247)
T ss_dssp CSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGGGCBCTTSSBTTTTCEECCCCHHHHHHTTCHHHHHHTTCC
T ss_pred CCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHH-HHHHHhhcccCCccccCceecCCCcHHHhhhhhhhhccccchh
Confidence 554323678899999999999999999999999998 589998 99999999999987543
Q ss_pred -----hccccccccc------CcEEecCCeEcCCChhhHHHHHHHHHHHhcCH
Q 038375 61 -----LAPACATTVE------SRVPQDGKVVTSRGPCTTMEFAVALVEQLYGK 102 (121)
Q Consensus 61 -----l~~~g~~~~~------~~~v~dg~i~T~~g~~~~~~~a~~li~~~~~~ 102 (121)
+++.|+.|++ ..+|+|||+||++|+.++.+|++++|+.+...
T Consensus 192 ~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 192 TIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp CHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 4445777776 47999999999999999999999999998653
No 26
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.88 E-value=6e-23 Score=155.76 Aligned_cols=99 Identities=26% Similarity=0.285 Sum_probs=90.5
Q ss_pred cchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccC----cEEecCCe
Q 038375 4 PGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVES----RVPQDGKV 79 (121)
Q Consensus 4 ~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~----~~v~dg~i 79 (121)
.++..+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.+++.|+++++. .+++|||+
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~i 177 (396)
T 3uk7_A 99 RAPEYLALTASVVELVKEFSRSGKPIASICHGQ-LILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSL 177 (396)
T ss_dssp SHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTE
T ss_pred cchhhcccCHHHHHHHHHHHHcCCEEEEECchH-HHHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCcceEecCCE
Confidence 456778889999999999999999999999996 6999999999999999999999998767777653 48999999
Q ss_pred EcCCChhhHHHHHHHHHHHhcCHH
Q 038375 80 VTSRGPCTTMEFAVALVEQLYGKE 103 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~~~~ 103 (121)
|||+|+.++++|++++|+++.|++
T Consensus 178 iT~~g~~~~~d~al~li~~l~g~~ 201 (396)
T 3uk7_A 178 ITAATYEGHPEFIQLFVKALGGKI 201 (396)
T ss_dssp EEESSGGGHHHHHHHHHHHTTCEE
T ss_pred EEecCcccHHHHHHHHHHHHhccc
Confidence 999999999999999999999975
No 27
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.88 E-value=1.7e-22 Score=153.27 Aligned_cols=98 Identities=29% Similarity=0.321 Sum_probs=89.8
Q ss_pred cchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccC----cEEecCCe
Q 038375 4 PGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVES----RVPQDGKV 79 (121)
Q Consensus 4 ~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~----~~v~dg~i 79 (121)
.++..+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.++..++++++. ++|+|||+
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~-~~La~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~i 370 (396)
T 3uk7_A 292 RAPEYLALNEHVLNIVKEFMNSEKPVASICHGQ-QILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNL 370 (396)
T ss_dssp SHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGH-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTE
T ss_pred cchhhhccCHHHHHHHHHHHHCCCEEEEEchHH-HHHHHcCCcCCCEEecCccHHHHHHHCCCEEEcCCCceeEEEcCCE
Confidence 467778889999999999999999999999996 6999999999999999999998887667888875 59999999
Q ss_pred EcCCChhhHHHHHHHHHHHhcCH
Q 038375 80 VTSRGPCTTMEFAVALVEQLYGK 102 (121)
Q Consensus 80 ~T~~g~~~~~~~a~~li~~~~~~ 102 (121)
|||+|+.+..+|++++|+++.+.
T Consensus 371 iTs~g~~~~~d~~l~li~~l~~~ 393 (396)
T 3uk7_A 371 VTGAAWPGHPEFVSQLMALLGIQ 393 (396)
T ss_dssp EEESSGGGHHHHHHHHHHHHTCE
T ss_pred EECCCchhHHHHHHHHHHHhccc
Confidence 99999999999999999999874
No 28
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.81 E-value=5.2e-21 Score=136.11 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=81.6
Q ss_pred ccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCC-CCeeecC-c-chHHhhcccccccccC---cEEec--CCeEc
Q 038375 10 KESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLK-GLKATCY-P-SFMEQLAPACATTVES---RVPQD--GKVVT 81 (121)
Q Consensus 10 ~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~-g~~~t~~-~-~~~~~l~~~g~~~~~~---~~v~d--g~i~T 81 (121)
+.|+.+++||+++++++++|++||+|+ ++|+++ |+ ||++|+| | ...+.|++.|+.+++. .+++| ||+||
T Consensus 117 ~~~~~l~~~l~~~~~~gk~vaaIC~G~-~~La~a--L~~Gr~~Tth~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liT 193 (232)
T 1vhq_A 117 TVDRELKALAQAMHQAGKPLGFMCIAP-AMLPKI--FDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVT 193 (232)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEETTGG-GGHHHH--CSSCCEECCCSCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEE
T ss_pred ccCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHH--hcCCCEEeccCCHHHHHHHHHcCCEEecCCCCceEEecCCCEEE
Confidence 358999999999999999999999997 589998 78 9999999 5 6778887767777763 55555 99999
Q ss_pred CCChhhHHHHHHHHHHHhcCHHHHHHhhccccccccC
Q 038375 82 SRGPCTTMEFAVALVEQLYGKERADEVSGPLVVTFID 118 (121)
Q Consensus 82 ~~g~~~~~~~a~~li~~~~~~~~a~~v~~~l~~~~~~ 118 (121)
|+ +++|++++|++++|.+.+ +++.+.+.+++
T Consensus 194 s~----~~d~al~lv~~~~G~~~~--~~~~~~~~~~~ 224 (232)
T 1vhq_A 194 TP----AYMLAQNIAEAASGIDKL--VSRVLVLAEEG 224 (232)
T ss_dssp EC----GGGTCSSHHHHHHHHHHH--HHHHHHHHC--
T ss_pred CC----CHHHHHHHHHHHcCHHHH--HHHHHHhhhcc
Confidence 97 788999999999998753 55556665554
No 29
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.76 E-value=3.6e-19 Score=127.69 Aligned_cols=89 Identities=11% Similarity=0.069 Sum_probs=71.3
Q ss_pred cccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcC-CCCCCeeecCcchHHhhccccccccc---CcEEec--CCeEcC
Q 038375 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGSRG-LLKGLKATCYPSFMEQLAPACATTVE---SRVPQD--GKVVTS 82 (121)
Q Consensus 9 l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aG-ll~g~~~t~~~~~~~~l~~~g~~~~~---~~~v~d--g~i~T~ 82 (121)
+..|+.+++||+++++++|+|++||+|+ ++|+++| ||+||++|+||...+.+++.|+.|++ +++|+| ||+||+
T Consensus 134 ~~~~~~l~~~lr~~~~~gk~IaaIC~G~-~~La~ag~lL~Gr~~T~~~~~~~~l~~~Ga~~~~~~~~~vVvD~~g~liTs 212 (242)
T 3l3b_A 134 DYILPEFKNAVREFYNAKKPIGAVCISP-AVVVALLKDIAKVKVTIGEDSNGLIDKMGGVHVDCPTIKSVKDDVNRIFSC 212 (242)
T ss_dssp CCBCHHHHHHHHHHHHTTCCEEEETTHH-HHHHHHHTTTCCCEECCCC----CHHHHTCEECCCCTTCCEEETTTTEEEE
T ss_pred ccCCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHhCcccCCCEEEecCChHHHHHHCCCEEEcCCCCeEEEECCCCEEEC
Confidence 3568999999999999999999999997 6999999 99999999999887778777888887 579999 999999
Q ss_pred CChhhHHHHHHHHHHHhcCH
Q 038375 83 RGPCTTMEFAVALVEQLYGK 102 (121)
Q Consensus 83 ~g~~~~~~~a~~li~~~~~~ 102 (121)
+++.. +..+.|.+.|.
T Consensus 213 ~a~~~----~~~~~e~~~g~ 228 (242)
T 3l3b_A 213 SAYMR----NDSLYNVYLGI 228 (242)
T ss_dssp CGGGS----CCCHHHHHHHH
T ss_pred cCccc----CCCHHHHHhCH
Confidence 98742 33444444443
No 30
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.22 E-value=7.3e-12 Score=101.09 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=67.5
Q ss_pred CCccchhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhc-CCCCCCeeecCcchHHhhcccccccccCcEEecCCe
Q 038375 1 GGVPGATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSR-GLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKV 79 (121)
Q Consensus 1 gG~~g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a-Gll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i 79 (121)
||..++..+..++.+++||+++++++|+|++||+|+ ++|+++ ||. .++..|. +.+|+|+++
T Consensus 603 GG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~-~lLA~AlGL~-------------~L~~aGa----~~VVvDg~l 664 (715)
T 1sy7_A 603 GGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAV-DLVAKAIALP-------------QVTVSSE----AEVHESYGV 664 (715)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHHCCT-------------TSCCCCS----SSCEEETTE
T ss_pred CCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHH-HHHHHccCcH-------------hHHhcCC----CcEEEeCCE
Confidence 454567778889999999999999999999999986 699999 983 2333332 679999999
Q ss_pred EcCCChh------------hHHHHHHHHHHHhcC
Q 038375 80 VTSRGPC------------TTMEFAVALVEQLYG 101 (121)
Q Consensus 80 ~T~~g~~------------~~~~~a~~li~~~~~ 101 (121)
||++|+. +..+|+..+++.+..
T Consensus 665 ITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 665 VTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp EEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred EECCCCcccccccccccccCHHHHHHHHHHHHHc
Confidence 9999985 567788888887764
No 31
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=98.44 E-value=3e-07 Score=73.97 Aligned_cols=41 Identities=17% Similarity=0.102 Sum_probs=38.1
Q ss_pred hhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCC
Q 038375 6 ATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLK 47 (121)
Q Consensus 6 ~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~ 47 (121)
++.|..++.+++||+++++.+|+|++||+|++ +|..+|+..
T Consensus 612 ~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~-vL~~aGi~~ 652 (688)
T 2iuf_A 612 ASTLYPAGRPLNILLDAFRFGKTVGALGSGSD-ALESGQISS 652 (688)
T ss_dssp CCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHH-HHHHTTCCT
T ss_pred hhhcccChHHHHHHHHHHHcCCEEEEECchHH-HHHHcCCCC
Confidence 78899999999999999999999999999986 899999853
No 32
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=98.27 E-value=7.3e-07 Score=72.21 Aligned_cols=41 Identities=2% Similarity=-0.055 Sum_probs=38.5
Q ss_pred chhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCC
Q 038375 5 GATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLL 46 (121)
Q Consensus 5 g~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll 46 (121)
+++.|+.|+.+++||+++++++|+|++||+|+ ++|+++|+-
T Consensus 671 g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp-~lLa~AGL~ 711 (753)
T 3ttv_A 671 NIADIADNGDANYYLMEAYKHLKPIALAGDAR-KFKATIKIA 711 (753)
T ss_dssp CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGG-GGGGGGTCC
T ss_pred ChHHhhhCHHHHHHHHHHHhcCCeEEEECchH-HHHHHcCCC
Confidence 78999999999999999999999999999998 599999984
No 33
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=98.03 E-value=4.6e-06 Score=67.08 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=36.8
Q ss_pred hhCcccCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCC
Q 038375 6 ATNLKESEVLESIVKKQASDGRLNAVICASPAEALGSRGLL 46 (121)
Q Consensus 6 ~~~l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll 46 (121)
++.|+.++.++.|++++++.+|+|++||+|++ +|..+|+-
T Consensus 610 ~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~-lL~~AGI~ 649 (688)
T 3ej6_A 610 MSPLFPAGRPSQILTDGYRWGKPVAAVGSAKK-ALQSIGVE 649 (688)
T ss_dssp CCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHH-HHHHTTCC
T ss_pred hhhhccCHHHHHHHHHHHHcCCEEEEeCccHH-HHHHcCCC
Confidence 37899999999999999999999999999985 89999984
No 34
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=97.83 E-value=6.4e-06 Score=56.79 Aligned_cols=38 Identities=34% Similarity=0.417 Sum_probs=33.7
Q ss_pred cCHHHHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCC
Q 038375 11 ESEVLESIVKKQASDGRLNAVICASPAEALGSRGLLKGL 49 (121)
Q Consensus 11 ~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~ 49 (121)
.++.+.++|+++.+++++|.+||.|. .+|+.+|+|+|+
T Consensus 64 ~~~~~~~~l~~~~~~~~pilgIC~G~-qlLa~aGll~g~ 101 (213)
T 3d54_D 64 AREKIAFEIAKAAERGKLIMGICNGF-QILIEMGLLKGA 101 (213)
T ss_dssp HTSTTHHHHHHHHHHTCEEEECHHHH-HHHHHHTSSCSE
T ss_pred ccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCCCCC
Confidence 46778999999999999999999986 589999999874
No 35
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=96.35 E-value=0.0011 Score=45.04 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=26.6
Q ss_pred cccCHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 9 l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+.++..+.++|+++.++++++.+||.|.+ +|+.
T Consensus 55 ~~~~~~~~~~i~~~~~~~~pilgIC~G~q-~l~~ 87 (196)
T 2nv0_A 55 LIDTYQFMEPLREFAAQGKPMFGTCAGLI-ILAK 87 (196)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEETHHHH-HHSB
T ss_pred HhhhHHHHHHHHHHHHCCCcEEEECHHHH-HHHH
Confidence 33345568899999999999999999976 7775
No 36
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=96.07 E-value=0.0016 Score=45.13 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=26.8
Q ss_pred cccCHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 9 LKESEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 9 l~~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+.++..+.++|+++.+++++|.+||.|.+ +|+.
T Consensus 77 ~~~~~~~~~~i~~~~~~~~PilGIC~G~Q-lL~~ 109 (219)
T 1q7r_A 77 LIDRYGLMEPLKQFAAAGKPMFGTCAGLI-LLAK 109 (219)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEETTHHH-HHEE
T ss_pred HhhhhHHHHHHHHHHHcCCeEEEECHHHH-HHHH
Confidence 33345567899999999999999999976 7776
No 37
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=95.65 E-value=0.0031 Score=43.32 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 12 SEVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 12 ~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+..+.++|+++.++++++.+||.|.+ +|+.+
T Consensus 77 ~~~~~~~i~~~~~~g~PilGIC~G~Q-lL~~~ 107 (208)
T 2iss_D 77 EMDMDEKLVERINNGLPVFATCAGVI-LLAKR 107 (208)
T ss_dssp HTTCHHHHHHHHHTTCCEEEETHHHH-HHEEE
T ss_pred hhhHHHHHHHHHHCCCeEEEECHHHH-HHHHH
Confidence 44467899999999999999999976 67763
No 38
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=95.58 E-value=0.021 Score=39.92 Aligned_cols=30 Identities=13% Similarity=0.333 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
....++|+++.++++++.+||-|.+ +|+.+
T Consensus 71 ~~~~~~i~~~~~~~~PvLGIClG~Q-lL~~~ 100 (236)
T 3l7n_A 71 QAEVKLIQKAAKSEKIIVGVCLGAQ-LMGVA 100 (236)
T ss_dssp HHHHHHHHHHHHTTCEEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEchHHH-HHHHH
Confidence 4478999999999999999999976 67763
No 39
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.48 E-value=0.0051 Score=41.33 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=27.4
Q ss_pred hCcccCHHHHHHHHHHHhCC-CeEEEechhHHHHHHhc
Q 038375 7 TNLKESEVLESIVKKQASDG-RLNAVICASPAEALGSR 43 (121)
Q Consensus 7 ~~l~~~~~l~~~l~~~~~~~-~~i~aic~g~~~lLa~a 43 (121)
+.+..+..+.++|+++.+++ ++|.+||.|.+ +|+.+
T Consensus 54 ~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q-~l~~~ 90 (191)
T 2ywd_A 54 GKLAREYGIEDEVRKRVEEGSLALFGTCAGAI-WLAKE 90 (191)
T ss_dssp HHHHHHTTHHHHHHHHHHTTCCEEEEETHHHH-HHEEE
T ss_pred HHhhhhhhHHHHHHHHHHCCCCeEEEECHHHH-HHHHH
Confidence 33333456788999999999 99999999965 67763
No 40
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=94.88 E-value=0.02 Score=39.66 Aligned_cols=30 Identities=13% Similarity=0.017 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhC-CCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASD-GRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~-~~~i~aic~g~~~lLa~a 43 (121)
..+.++|+++.++ +++|.+||.|.+ +|+.+
T Consensus 66 ~~~~~~i~~~~~~~g~PilGIC~G~Q-lL~~~ 96 (227)
T 2abw_A 66 DTLYNALVHFIHVLKKPIWGTCAGCI-LLSKN 96 (227)
T ss_dssp HHHHHHHHHHHHTSCCCEEEETHHHH-HTEEE
T ss_pred HHHHHHHHHHHHhcCCEEEEECHHHH-HHHHH
Confidence 5688999999999 999999999965 77763
No 41
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=94.83 E-value=0.035 Score=47.89 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=33.7
Q ss_pred cccCHHHHHHHHHHH-hCCCeEEEechhHHHHHHhc-CCCCCC
Q 038375 9 LKESEVLESIVKKQA-SDGRLNAVICASPAEALGSR-GLLKGL 49 (121)
Q Consensus 9 l~~~~~l~~~l~~~~-~~~~~i~aic~g~~~lLa~a-Gll~g~ 49 (121)
.+.++.+.+.++++. ++++++.+||+|.+ +|.++ |||.|.
T Consensus 1118 ~l~~~~l~~~l~~~~~~~g~pvLGICnG~Q-lL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1118 ILFNHRVRDEFETFFHRPQTLALGVCNGCQ-MMSNLRELIPGS 1159 (1303)
T ss_dssp HHTSHHHHHHHHHHHHSSSCEEEEETHHHH-HHHTTGGGSTTC
T ss_pred HHhchhHHHHHHHHHHhCCCcEEEECHHHH-HHHHhcCcCCCC
Confidence 456788888899865 68999999999976 88888 999886
No 42
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=94.62 E-value=0.024 Score=38.09 Aligned_cols=30 Identities=10% Similarity=0.063 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 12 SEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 12 ~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
...+.++++++.++++++.+||.|.+ +|+.
T Consensus 58 ~~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 87 (189)
T 1wl8_A 58 TGNCEKVLEHYDEFNVPILGICLGHQ-LIAK 87 (189)
T ss_dssp CTTHHHHHHTGGGTCSCEEEETHHHH-HHHH
T ss_pred hhhHHHHHHHHhhCCCeEEEEcHHHH-HHHH
Confidence 34567888877788999999999976 6665
No 43
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=94.38 E-value=0.036 Score=38.87 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
..+.++|+++.++++|+.+||-|.+ +|+.+
T Consensus 80 ~~~~~~i~~~~~~~~PiLGIC~G~Q-lL~~a 109 (239)
T 1o1y_A 80 KYEFQLIEEILKKEIPFLGICLGSQ-MLAKV 109 (239)
T ss_dssp HHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEchhHH-HHHHH
Confidence 3678899999889999999999976 67653
No 44
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=94.30 E-value=0.029 Score=37.99 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 14 VLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 14 ~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
...++++++ +.++++.+||-|.+ +|+.+
T Consensus 66 ~~~~~i~~~-~~~~PvLGIC~G~Q-lL~~~ 93 (195)
T 1qdl_B 66 VSLDVIKYL-GKRTPILGVCLGHQ-AIGYA 93 (195)
T ss_dssp THHHHHHHH-TTTSCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHh-cCCCcEEEEehHHH-HHHHH
Confidence 456888875 78999999999976 67763
No 45
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=94.17 E-value=0.047 Score=38.76 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
..++++|+++.+.++++.+||.|.+ +|+.+
T Consensus 69 ~~~~~~i~~~~~~~~PvlGIC~G~Q-ll~~~ 98 (250)
T 3m3p_A 69 PTLLALIRDAVAQRVPVIGHCLGGQ-LLAKA 98 (250)
T ss_dssp HHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 5678899999999999999999976 67764
No 46
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=93.79 E-value=0.02 Score=38.82 Aligned_cols=30 Identities=17% Similarity=0.121 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
..+.++|+++.++++|+.+||.|.+ +|+.+
T Consensus 62 ~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 91 (200)
T 1ka9_H 62 SGFVERVRRHLERGLPFLGICVGMQ-VLYEG 91 (200)
T ss_dssp SCTHHHHHHHHHTTCCEEECTHHHH-TTSSE
T ss_pred cCHHHHHHHHHHcCCeEEEEcHHHH-HHHHh
Confidence 5578899999999999999999975 78887
No 47
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=93.62 E-value=0.087 Score=38.05 Aligned_cols=29 Identities=0% Similarity=-0.365 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+.+.++++++.++++|+.+||.|.+ +|+.
T Consensus 106 ~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 134 (289)
T 2v4u_A 106 LGKLQAISWARTKKIPFLGVXLGMQ-LAVI 134 (289)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECccHH-HHHH
Confidence 5688999999999999999999976 6665
No 48
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=91.71 E-value=0.15 Score=35.92 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=26.3
Q ss_pred cCHHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 11 ESEVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 11 ~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+|...+++|+++.++++++.+||-|-+ +|+.+
T Consensus 93 rd~~~~~lir~a~~~~~PiLGIC~G~Q-ll~~a 124 (254)
T 3fij_A 93 RDSYEIALVRAALDAGKPIFAICRGMQ-LVNVA 124 (254)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred hhHHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 345578999999999999999999975 67754
No 49
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=91.62 E-value=0.089 Score=35.50 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=24.2
Q ss_pred HHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 15 LESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 15 l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+.++|+++.++++++.+||.|.+ +|+.+
T Consensus 66 ~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 93 (201)
T 1gpw_B 66 LIDFVRKHVEDERYVVGVCLGMQ-LLFEE 93 (201)
T ss_dssp CHHHHHHHHHTTCEEEEETHHHH-TTSSE
T ss_pred HHHHHHHHHHcCCeEEEEChhHH-HHHHh
Confidence 67899999899999999999965 77765
No 50
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=91.02 E-value=0.25 Score=37.17 Aligned_cols=31 Identities=13% Similarity=0.050 Sum_probs=26.4
Q ss_pred cCHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 11 ESEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 11 ~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
.+...+++|+++.++++|+.+||-|-+ +|+.
T Consensus 246 ~~~~~~~~Ir~~~~~~~PILGIClG~Q-LLa~ 276 (379)
T 1a9x_B 246 PCDYAITAIQKFLETDIPVFGICLGHQ-LLAL 276 (379)
T ss_dssp TCHHHHHHHHHHTTSCCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECchHH-HHHH
Confidence 357788999999998999999999976 6775
No 51
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=88.92 E-value=0.36 Score=34.43 Aligned_cols=29 Identities=0% Similarity=-0.267 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+..+.+++.+.++++|+.+||-|.+ +|+.
T Consensus 83 ~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~ 111 (273)
T 2w7t_A 83 DGKCAAAQVARMNNIPYFGVXLGMQ-VAVI 111 (273)
T ss_dssp HHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred hhHHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 4577889998888999999999976 5654
No 52
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=88.81 E-value=0.1 Score=35.44 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=20.9
Q ss_pred HHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 16 ESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 16 ~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
..+++...+.++|+.+||-|-+ +|+.+
T Consensus 62 ~~~i~~~~~~~~PvlGIClG~Q-lL~~~ 88 (211)
T 4gud_A 62 RDLIELVKRVEKPLLGICLGMQ-LLGKL 88 (211)
T ss_dssp TTCHHHHHHCCSCEEEETHHHH-TTSSE
T ss_pred cChHHHHHHcCCCEEEEchhHh-HHHHH
Confidence 3456777788999999999965 67653
No 53
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=88.70 E-value=0.19 Score=34.49 Aligned_cols=31 Identities=10% Similarity=0.142 Sum_probs=25.2
Q ss_pred cCHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 11 ESEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 11 ~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+...+.+.|++..++|+++.++|.|.+ ++..
T Consensus 98 ~~~gl~~~l~~~~~~G~p~~G~sAGa~-~l~~ 128 (206)
T 3l4e_A 98 KRTGADKLILEEIAAGKLYIGESAGAV-ITSP 128 (206)
T ss_dssp HHHTHHHHHHHHHHTTCEEEEETHHHH-TTSS
T ss_pred HHCChHHHHHHHHHcCCeEEEECHHHH-Hhcc
Confidence 456788899999999999999999853 5543
No 54
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=86.52 E-value=0.63 Score=31.76 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+.+.+++ .++++++.+||-|.+ +|+.+
T Consensus 75 ~~l~~~~---~~~~~PiLGIC~G~Q-ll~~~ 101 (212)
T 2a9v_A 75 GSVGKYI---DDHNYPILGICVGAQ-FIALH 101 (212)
T ss_dssp HHHHHHH---HHCCSCEEEETHHHH-HHHHH
T ss_pred hhHHHHH---HhCCCCEEEEChHHH-HHHHH
Confidence 4444444 478999999999976 66653
No 55
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=85.76 E-value=0.25 Score=34.33 Aligned_cols=31 Identities=13% Similarity=0.038 Sum_probs=24.7
Q ss_pred cCHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 11 ESEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 11 ~~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
++..+.+.|+++.++|+++.++|.|. .+|+.
T Consensus 98 ~~~gl~~~l~~~~~~G~p~~G~sAG~-~~l~~ 128 (229)
T 1fy2_A 98 RERGLLAPMADRVKRGALYIGWSAGA-NLACP 128 (229)
T ss_dssp HHTTCHHHHHHHHHTTCEEEEETHHH-HHTSS
T ss_pred HHCChHHHHHHHHHcCCEEEEECHHH-Hhhcc
Confidence 34467788998889999999999985 46665
No 56
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=85.64 E-value=0.32 Score=32.29 Aligned_cols=25 Identities=20% Similarity=0.126 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 15 LESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 15 l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+.++++ ++++|+.+||.|.+ +|+.+
T Consensus 60 ~~~~i~---~~~~PilGIC~G~Q-ll~~~ 84 (186)
T 2ywj_A 60 LLEKIK---NSNLPILGTCAGMV-LLSKG 84 (186)
T ss_dssp HHHHHH---TCCCCEEEETHHHH-HHSSC
T ss_pred HHHHHH---hcCCcEEEECHHHH-HHHHH
Confidence 445555 78899999999975 77765
No 57
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=85.06 E-value=0.78 Score=30.61 Aligned_cols=27 Identities=11% Similarity=0.138 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 15 LESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 15 l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
...+++. .++++|+.+||-|-+ +|+.+
T Consensus 66 ~~~l~~~-~~~~~PilGIC~G~Q-ll~~~ 92 (192)
T 1i1q_B 66 MPELLTR-LRGKLPIIGICLGHQ-AIVEA 92 (192)
T ss_dssp HHHHHHH-HBTTBCEEEETHHHH-HHHHH
T ss_pred HHHHHHH-HhcCCCEEEECcChH-HHHHH
Confidence 3444543 568899999999976 67753
No 58
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=83.26 E-value=1 Score=32.70 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhCC--CeEEEechhHHHHHHh
Q 038375 14 VLESIVKKQASDG--RLNAVICASPAEALGS 42 (121)
Q Consensus 14 ~l~~~l~~~~~~~--~~i~aic~g~~~lLa~ 42 (121)
.++++++++.+++ +||.+||-|-+ +|+.
T Consensus 110 ~l~~~~~~~~~~g~~~PiLGIC~G~Q-ll~~ 139 (315)
T 1l9x_A 110 IFYNLSIQSFDDGDYFPVWGTCLGFE-ELSL 139 (315)
T ss_dssp HHHHHHHHHHHTTCCCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEChHHH-HHHH
Confidence 4667777776554 99999999976 5654
No 59
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=78.19 E-value=3 Score=33.49 Aligned_cols=28 Identities=18% Similarity=0.321 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 14 VLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 14 ~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
.++++|++..+.++++.+||-|-+ +|+.
T Consensus 509 ~~~~lI~~a~~~~iPiLGIClG~Q-lLa~ 536 (645)
T 3r75_A 509 RLYAWLRHLIDEGKPFMAVCLSHQ-ILNA 536 (645)
T ss_dssp HHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHHCCCCEEEECHHHH-HHHH
Confidence 467888988888999999999976 6665
No 60
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=77.85 E-value=3 Score=32.89 Aligned_cols=29 Identities=10% Similarity=-0.032 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+..+.+++.+.++++|+.+||-|-+ +|+.
T Consensus 359 ~g~~~~i~~a~~~~~PiLGIClG~Q-ll~v 387 (545)
T 1s1m_A 359 EGMITTARFARENNIPYLGICLGMQ-VALI 387 (545)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hhhHHHHHHHHHCCCcEEEECChHH-HHHH
Confidence 5677889998889999999999976 5663
No 61
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=74.21 E-value=1.7 Score=34.14 Aligned_cols=29 Identities=17% Similarity=0.098 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 14 VLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 14 ~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
.+.++|+++.++++|+.+||.|.+ +|+.+
T Consensus 67 ~~~~~i~~~~~~g~PiLGIC~G~Q-lL~~a 95 (555)
T 1jvn_A 67 GFEKPIREYIESGKPIMGIXVGLQ-ALFAG 95 (555)
T ss_dssp TCHHHHHHHHHTTCCEEEEEHHHH-TTEEE
T ss_pred cHHHHHHHHHHcCCcEEEEchhhh-hhhhh
Confidence 467889999899999999999975 77774
No 62
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=71.41 E-value=4.5 Score=31.90 Aligned_cols=29 Identities=10% Similarity=-0.143 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+..+.+++.+.++++|+.+||-|-+ +|+.
T Consensus 371 ~g~i~~ir~a~e~~iPiLGICLGmQ-lL~~ 399 (550)
T 1vco_A 371 EGKVRAAQYARERKIPYLGICLGLQ-IAVI 399 (550)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hhhHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 4567888988889999999999976 5554
No 63
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=70.32 E-value=3.9 Score=32.15 Aligned_cols=30 Identities=13% Similarity=-0.121 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHhCCCeEEEechhHHHHHHh
Q 038375 12 SEVLESIVKKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 12 ~~~l~~~l~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
.+..+++++.+.++++|+.+||-|-+ +|+.
T Consensus 365 ~~g~i~~ir~a~~~~~PiLGIClG~Q-ll~v 394 (535)
T 3nva_A 365 AEGKIKAIKYAREHNIPFLGICFGFQ-LSIV 394 (535)
T ss_dssp HHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECcchh-HHHH
Confidence 35678899999999999999999976 4553
No 64
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=69.98 E-value=3.8 Score=32.20 Aligned_cols=26 Identities=8% Similarity=0.004 Sum_probs=19.2
Q ss_pred HHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 17 SIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 17 ~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
.+++.+.++++|+.+||-|-+ +|+.+
T Consensus 74 ~l~~~a~~~g~PvLGIC~G~Q-lLa~~ 99 (556)
T 3uow_A 74 EVFEYFLEKKIPIFGICYGMQ-EIAVQ 99 (556)
T ss_dssp HHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHHhhhcCCCEEEECHHHH-HHHHH
Confidence 344555677999999999976 67753
No 65
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=69.20 E-value=2.8 Score=30.44 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+++.++++...++++++.+||-|.+.++...
T Consensus 122 ~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~ 152 (301)
T 2vdj_A 122 EELKRIMEYSKTNVTSTLHICWGAQAGLYHH 152 (301)
T ss_dssp HHHHHHHHHHHHHEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEcHHHHHHHHHh
Confidence 5688888888889999999999977435543
No 66
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=68.33 E-value=3 Score=30.50 Aligned_cols=31 Identities=19% Similarity=0.130 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 13 EVLESIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
+++.++++...++++++.+||-|.+.++...
T Consensus 134 ~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~ 164 (312)
T 2h2w_A 134 EELTEIMEWSRHNVYSTMFICWAAQAGLYYF 164 (312)
T ss_dssp HHHHHHHHHHHHHEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECHHHHHHHHHh
Confidence 5678888888889999999999977435543
No 67
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=58.30 E-value=4.1 Score=27.80 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=17.1
Q ss_pred HHHHhCCCeEEEechhHHHHHHh
Q 038375 20 KKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 20 ~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+...++++|+.+||.|.+ +|+.
T Consensus 90 ~~~~~~~~PilGIC~G~Q-ll~~ 111 (218)
T 2vpi_A 90 PAIFTIGKPVLGICYGMQ-MMNK 111 (218)
T ss_dssp GGGGTSSCCEEEETHHHH-HHHH
T ss_pred HHHHHcCCCEEEEcHHHH-HHHH
Confidence 344578999999999976 6765
No 68
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=50.49 E-value=3.9 Score=26.98 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcCCChhhHHHHHHH
Q 038375 15 LESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVA 94 (121)
Q Consensus 15 l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~~g~~~~~~~a~~ 94 (121)
+..+-+.|.+.+..=++.|+- -++++...||+..+-. ..+.+++ ..+||+--|.|.....+.+..
T Consensus 86 l~pvq~af~~~~~~QCGfCtp-G~ims~~all~~~~~p----t~~eI~~----------al~GNlCRCtgY~~I~~Av~~ 150 (160)
T 3hrd_D 86 PSLLQQCFLEAGAVQCGYCTP-GMILTAKALLDKNPDP----TDEEITV----------AMSGNLCRCTGYIKIHAAVRY 150 (160)
T ss_dssp CCHHHHHHHHHTCCSSCSSHH-HHHHHHHHHHTTCSSC----CHHHHHH----------HHTTCCCSSSCSHHHHHHHHH
T ss_pred cCHHHHHHHHcCCCcCCcchh-hHHHHHHHHHHhCCCC----CHHHHHH----------HHcCCCCCCCCcHHHHHHHHH
Confidence 334444455666777999995 5789988888753211 1222222 136888888888777666655
Q ss_pred HHHH
Q 038375 95 LVEQ 98 (121)
Q Consensus 95 li~~ 98 (121)
..+.
T Consensus 151 aa~~ 154 (160)
T 3hrd_D 151 AVER 154 (160)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 69
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=47.88 E-value=3.4 Score=27.33 Aligned_cols=70 Identities=11% Similarity=0.151 Sum_probs=45.0
Q ss_pred HHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcCCChhhHHHHHHH
Q 038375 15 LESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVA 94 (121)
Q Consensus 15 l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~~g~~~~~~~a~~ 94 (121)
+..+-+.|.+.+..-+++|+- -+++....||+..+ .+ ..+.+++ ..+||+.-|.|.....+.+..
T Consensus 86 l~pvq~a~~~~~~~QCG~Ctp-G~imsa~all~~~~---~p-t~~ei~~----------~l~gnlCRCtgY~~I~~Av~~ 150 (163)
T 1ffv_A 86 LHAVQEGFYKEHGLQCGFCTP-GMLMRAYRFLQENP---NP-TEAEIRM----------GMTGNLCRCTGYQNIVKAVQY 150 (163)
T ss_dssp CCHHHHHHHHTTCCSSCSSHH-HHHHHHHHHHHHCS---SC-CHHHHHH----------HTTTCCCSSSCSHHHHHHHHH
T ss_pred cCHHHHHHHHhCCccCccccH-hHHHHHHHHHHcCC---CC-CHHHHHH----------HHcCCccCCCCCHHHHHHHHH
Confidence 344555566777788999995 57888888876322 11 1222322 135899999998877776666
Q ss_pred HHHHh
Q 038375 95 LVEQL 99 (121)
Q Consensus 95 li~~~ 99 (121)
..+.+
T Consensus 151 ~a~~~ 155 (163)
T 1ffv_A 151 AARKL 155 (163)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55544
No 70
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=47.84 E-value=3.5 Score=32.09 Aligned_cols=26 Identities=12% Similarity=-0.052 Sum_probs=19.1
Q ss_pred HHHHHHHhCCCeEEEechhHHHHHHhc
Q 038375 17 SIVKKQASDGRLNAVICASPAEALGSR 43 (121)
Q Consensus 17 ~~l~~~~~~~~~i~aic~g~~~lLa~a 43 (121)
...+...+.++|+.+||-|-+ +|+.+
T Consensus 73 ~~~~~~~~~~~PvLGIC~G~Q-lla~~ 98 (527)
T 3tqi_A 73 RAPAFIFEIGCPVLGICYGMQ-TMAYQ 98 (527)
T ss_dssp -CCCSTTTSSSCEEEETHHHH-HHHHH
T ss_pred hhHHHHHhcCCCEEEEChHHH-HHHHH
Confidence 344556778999999999976 67653
No 71
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=44.02 E-value=14 Score=26.63 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=25.1
Q ss_pred ccCHHHHHHHHHHHhCC-CeEEEechhHHHHHH
Q 038375 10 KESEVLESIVKKQASDG-RLNAVICASPAEALG 41 (121)
Q Consensus 10 ~~~~~l~~~l~~~~~~~-~~i~aic~g~~~lLa 41 (121)
+.+..+.+.|++.+++| .++++.|.|. .++.
T Consensus 128 l~~t~l~~~L~~~~~~G~~~~~GtSAGA-~i~~ 159 (291)
T 3en0_A 128 LADTPLMDRIRQRVHNGEISLAGTSAGA-AVMG 159 (291)
T ss_dssp HTTCHHHHHHHHHHHTTSSEEEEETHHH-HTTS
T ss_pred HHhCCHHHHHHHHHHCCCeEEEEeCHHH-Hhhh
Confidence 35678889999999999 8999999984 4543
No 72
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=36.38 E-value=4 Score=26.84 Aligned_cols=66 Identities=9% Similarity=0.102 Sum_probs=40.7
Q ss_pred HHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcCCChhhHHHHHHHHHHHh
Q 038375 20 KKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVALVEQL 99 (121)
Q Consensus 20 ~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~~g~~~~~~~a~~li~~~ 99 (121)
+.+.+.+-.-++.|+.+ +++....+|+..+- ...+.+++ ..+||++-|.|.....+......+.+
T Consensus 90 ~a~~~~~~~qCG~Ctpg-~im~a~~ll~~~~~----pt~~~i~~----------~l~gnlcRCtgy~~i~~A~~~~~~~~ 154 (161)
T 1rm6_C 90 AAFHEKLGTQCGFCTPG-MIMASEALLRKNPS----PSRDEIKA----------ALAGNLCRCTGYVKIIKSVETAAAAR 154 (161)
T ss_dssp HHHHHHTCCSSCSSHHH-HHHHHHHHHHHCSS----CCHHHHHH----------HTTTCCCSSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCCchH-HHHHHHHHHhcCCC----CCHHHHHH----------HHcCCeECCCCCHHHHHHHHHHHHHH
Confidence 33445556899999965 67777777653211 11222222 13689999999887777766665544
Q ss_pred c
Q 038375 100 Y 100 (121)
Q Consensus 100 ~ 100 (121)
+
T Consensus 155 ~ 155 (161)
T 1rm6_C 155 L 155 (161)
T ss_dssp H
T ss_pred h
Confidence 3
No 73
>2kw3_C Regulatory factor X-associated protein; mhcii, RFX5, rfxap, enhanceosome, DNA binding protein; NMR {Homo sapiens}
Probab=34.73 E-value=25 Score=19.09 Aligned_cols=15 Identities=27% Similarity=0.297 Sum_probs=12.5
Q ss_pred CcccCHHHHHHHHHH
Q 038375 8 NLKESEVLESIVKKQ 22 (121)
Q Consensus 8 ~l~~~~~l~~~l~~~ 22 (121)
.|+++|+++.|++..
T Consensus 27 SLLRsPEVI~Fl~~q 41 (62)
T 2kw3_C 27 SLLRSPEVVQFLQKQ 41 (62)
T ss_dssp HTTCCHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHH
Confidence 366899999999876
No 74
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=30.56 E-value=8.2 Score=25.51 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCeEEEechhHHHHHHhcCCCCCCeeecCcchHHhhcccccccccCcEEecCCeEcCCChhhHHHHHHH
Q 038375 15 LESIVKKQASDGRLNAVICASPAEALGSRGLLKGLKATCYPSFMEQLAPACATTVESRVPQDGKVVTSRGPCTTMEFAVA 94 (121)
Q Consensus 15 l~~~l~~~~~~~~~i~aic~g~~~lLa~aGll~g~~~t~~~~~~~~l~~~g~~~~~~~~v~dg~i~T~~g~~~~~~~a~~ 94 (121)
+..+-+.|.+.+..-+++|+- -+++....||+..+ .+ ..+.+++ ..+||+.-|.|.....+.+..
T Consensus 87 ~~pvq~a~~~~~~~QCG~Ctp-G~imsa~all~~~~---~p-t~~eI~~----------~l~gNlCRCtgY~~I~~Av~~ 151 (166)
T 1n62_A 87 LSALQEGFRMMHGLQCGYCTP-GMIMRSHRLLQENP---SP-TEAEIRF----------GIGGNLCRCTGYQNIVKAIQY 151 (166)
T ss_dssp CCHHHHHHHHTTCCSSCSSHH-HHHHHHHHHHHHCS---SC-CHHHHHH----------HTTTCCCSSSTTHHHHHHHHH
T ss_pred cCHHHHHHHHcCCccCCccch-hHHHHHHHHHHcCC---CC-CHHHHHH----------HHcCCccCCCCCHHHHHHHHH
Confidence 334445566677788999995 57888888876322 11 1222222 135899999998777776655
Q ss_pred HHHH
Q 038375 95 LVEQ 98 (121)
Q Consensus 95 li~~ 98 (121)
..+.
T Consensus 152 ~a~~ 155 (166)
T 1n62_A 152 AAAK 155 (166)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 75
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=29.82 E-value=28 Score=21.93 Aligned_cols=30 Identities=13% Similarity=0.167 Sum_probs=20.4
Q ss_pred cEEecCCeEcCCChhhHHHHHHHHHHHhcC
Q 038375 72 RVPQDGKVVTSRGPCTTMEFAVALVEQLYG 101 (121)
Q Consensus 72 ~~v~dg~i~T~~g~~~~~~~a~~li~~~~~ 101 (121)
.++++|+.++.......++-...+|+.|..
T Consensus 153 tfiINGky~v~~~~~~s~e~~~~~i~~Ll~ 182 (184)
T 4dvc_A 153 AVVVNNRYLVQGQSAKSLDEYFDLVNYLLT 182 (184)
T ss_dssp EEEETTTEEECGGGCSSHHHHHHHHHHHTT
T ss_pred EEEECCEEeeCCcCCCCHHHHHHHHHHHHh
Confidence 478899976655444556667788887754
No 76
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=29.44 E-value=21 Score=27.67 Aligned_cols=22 Identities=9% Similarity=0.043 Sum_probs=17.1
Q ss_pred HHHHhCCCeEEEechhHHHHHHh
Q 038375 20 KKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 20 ~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+...+.++|+.+||-|-+ +|+.
T Consensus 73 ~~~~~~g~PvLGIC~G~Q-lla~ 94 (525)
T 1gpm_A 73 QYVFEAGVPVFGVCYGMQ-TMAM 94 (525)
T ss_dssp GGGGTSSSCEEEETHHHH-HHHH
T ss_pred HHHHHCCCCEEEEChHHH-HHHH
Confidence 344578999999999976 6665
No 77
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=24.94 E-value=29 Score=26.67 Aligned_cols=22 Identities=23% Similarity=0.155 Sum_probs=17.0
Q ss_pred HHHHhCCCeEEEechhHHHHHHh
Q 038375 20 KKQASDGRLNAVICASPAEALGS 42 (121)
Q Consensus 20 ~~~~~~~~~i~aic~g~~~lLa~ 42 (121)
+...+.++|+.+||-|-+ +|+.
T Consensus 65 ~~~~~~~~PvLGIC~G~Q-lla~ 86 (503)
T 2ywb_A 65 PRLFSSGLPLLGICYGMQ-LLAQ 86 (503)
T ss_dssp GGGGCSSCCEEEETHHHH-HHHH
T ss_pred HHHHhCCCCEEEECHHHH-HHHH
Confidence 334578999999999976 6765
No 78
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=23.66 E-value=1.3e+02 Score=18.10 Aligned_cols=70 Identities=9% Similarity=0.113 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHhCCCeEEE-----------echhHHHHHHhcCCC----CCCeeecCcchHHhhcccccccccCcEEec
Q 038375 12 SEVLESIVKKQASDGRLNAV-----------ICASPAEALGSRGLL----KGLKATCYPSFMEQLAPACATTVESRVPQD 76 (121)
Q Consensus 12 ~~~l~~~l~~~~~~~~~i~a-----------ic~g~~~lLa~aGll----~g~~~t~~~~~~~~l~~~g~~~~~~~~v~d 76 (121)
++.+.+++++.....+++.- .|.-.--+|...|+- .-..+...+...+.+.+......-+.+.+|
T Consensus 2 ~~~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~ 81 (121)
T 3gx8_A 2 STEIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVN 81 (121)
T ss_dssp CHHHHHHHHHHHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEET
T ss_pred CHHHHHHHHHHhccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEEC
Confidence 46778899998887766543 344444456666652 112334445566666543222223456778
Q ss_pred CCeEc
Q 038375 77 GKVVT 81 (121)
Q Consensus 77 g~i~T 81 (121)
|++|-
T Consensus 82 g~~iG 86 (121)
T 3gx8_A 82 KEFIG 86 (121)
T ss_dssp TEEEE
T ss_pred CEEEe
Confidence 88884
No 79
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=23.46 E-value=72 Score=19.53 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCeEEEechhH
Q 038375 13 EVLESIVKKQASDGRLNAVICASP 36 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~ 36 (121)
+.+.++|++..+++++|.-.|.+|
T Consensus 76 ~~~~~~i~~~~~~~~~vlVHC~~G 99 (157)
T 3rgo_A 76 HKGVQFALKYQALGQCVYVHCKAG 99 (157)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSSS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCC
Confidence 356678888888889999999765
No 80
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=23.14 E-value=75 Score=19.39 Aligned_cols=24 Identities=13% Similarity=0.011 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhCCCeEEEechhH
Q 038375 13 EVLESIVKKQASDGRLNAVICASP 36 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~ 36 (121)
+...+|+.+..++++.|...|.+|
T Consensus 68 ~~~~~fi~~~~~~~~~VlVHC~~G 91 (145)
T 2nt2_A 68 NDTYKFISKAKKHGSKCLVHSKMG 91 (145)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred HHHHHHHHHHHHcCCeEEEECCCC
Confidence 366789998888899999999876
No 81
>2rmf_A Urocortin, HUCN1; CRF ligand, sauvagine, astressin2B, urocortins, urotensins, CRF receptors, amidation, cleavage on PAIR of basic residues, hormone; NMR {Synthetic} SCOP: j.16.1.1
Probab=21.87 E-value=81 Score=15.64 Aligned_cols=26 Identities=15% Similarity=0.353 Sum_probs=18.6
Q ss_pred ChhhHHHHHHHHHHHhcCHHHHHHhh
Q 038375 84 GPCTTMEFAVALVEQLYGKERADEVS 109 (121)
Q Consensus 84 g~~~~~~~a~~li~~~~~~~~a~~v~ 109 (121)
.|.-++|+.+++++.+.--..++...
T Consensus 2 dPpiSiDLTFHlLR~miemar~e~~~ 27 (40)
T 2rmf_A 2 NPSLSIDLTFHLLRTLLELARTQSQR 27 (40)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 35567999999999888655555443
No 82
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=21.81 E-value=27 Score=15.90 Aligned_cols=9 Identities=67% Similarity=1.121 Sum_probs=5.8
Q ss_pred CCccchhCc
Q 038375 1 GGVPGATNL 9 (121)
Q Consensus 1 gG~~g~~~l 9 (121)
||+||+..+
T Consensus 13 gggpgagsl 21 (31)
T 1t0c_A 13 GGGPGAGSL 21 (31)
T ss_dssp CCSTTSSSC
T ss_pred cCCCCcccc
Confidence 566776655
No 83
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=21.54 E-value=84 Score=19.21 Aligned_cols=24 Identities=13% Similarity=0.164 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhCCCeEEEechhH
Q 038375 13 EVLESIVKKQASDGRLNAVICASP 36 (121)
Q Consensus 13 ~~l~~~l~~~~~~~~~i~aic~g~ 36 (121)
+.+.+|+++..+++++|.-.|.+|
T Consensus 70 ~~~~~~i~~~~~~~~~VlVHC~~G 93 (149)
T 1zzw_A 70 EEAFEFIEEAHQCGKGLLIHCQAG 93 (149)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred HHHHHHHHHHHHcCCeEEEECCCC
Confidence 356778888877889999999875
No 84
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.24 E-value=68 Score=18.74 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=21.0
Q ss_pred ccCHHHHHHHHHHHhCCCeEEEechh
Q 038375 10 KESEVLESIVKKQASDGRLNAVICAS 35 (121)
Q Consensus 10 ~~~~~l~~~l~~~~~~~~~i~aic~g 35 (121)
..++.+.++|+.+..+||++...-+|
T Consensus 35 tssqdirdiiksmkdngkplvvfvng 60 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNG 60 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECS
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecC
Confidence 34677888899998899998888776
No 85
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=20.68 E-value=90 Score=18.83 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCCeEEEechhH
Q 038375 14 VLESIVKKQASDGRLNAVICASP 36 (121)
Q Consensus 14 ~l~~~l~~~~~~~~~i~aic~g~ 36 (121)
.+.+++++..+++.++.-.|.+|
T Consensus 77 ~~~~~i~~~~~~~~~vlVHC~aG 99 (151)
T 2img_A 77 RFVQIVDEANARGEAVGVHCALG 99 (151)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSS
T ss_pred HHHHHHHHHHhCCCcEEEECCCC
Confidence 45667777767889999999865
Done!