Your job contains 1 sequence.
>038377
MQEEEDLPDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQRKH
KKIFKVQQRTEIRARKSKKLKRKKKKRVIGESEALDEALKKMKLKRGDLQLELIRMVLKR
EVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSDNAGTSCAVKIGA
EAAAVNRRRFRSKNIEPMPVGTLQVVPYKRDVVSLRRRRRRKRCHWCRRRGQSLIKCSSC
RKLFFCVDCVKEWYFDTQEDVKKACPVCRGTCGCKACSSSQYRDIDYKDLLKANNEVDKV
LHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYNRLYCCSCKTSI
VDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLCKCPNGRKVCTSGVRILEKKSLRTY
KEGYGSTYFDSSAASPSWKAPDGTAGILCPPMEFGGCGDSFLDLRCVFPSCWTKELEINA
EQIVGCYELPETIDMSSCCSVCTGMDHEVDGTKQLKVAAIRENSNDNFLFFPTLMDVQGD
KLEHFQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSD
WFEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEY
MDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHT
TDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAPEQKMANGMGGKSHSDCENKEVGLCDVL
GEEITRHEAGDLNVRDRNSSHDGDYDTDSDPDSLILGCGTNQNSKKSEKRMHFKDHKNNS
NYFIKERLAESCGAQWDVFRREDVVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGE
AVIIPAGCPYQIRNLKSCVNVVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKM
ALYAINTAVKEIRELTCAE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038377
(979 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141221 - symbol:B160 "AT4G21430" species:3702... 828 2.6e-208 4
TAIR|locus:2027109 - symbol:AT1G62310 "AT1G62310" species... 819 9.3e-119 3
TAIR|locus:2125221 - symbol:AT4G00990 "AT4G00990" species... 708 6.4e-108 2
TAIR|locus:2036014 - symbol:AT1G09060 "AT1G09060" species... 387 1.1e-98 5
TAIR|locus:2008875 - symbol:AT1G11950 "AT1G11950" species... 593 2.2e-94 4
FB|FBgn0037703 - symbol:JHDM2 "JmjC domain-containing his... 221 1.8e-33 3
UNIPROTKB|Q7LBC6 - symbol:KDM3B "Lysine-specific demethyl... 237 2.2e-31 3
UNIPROTKB|E1BE97 - symbol:LOC100848816 "Uncharacterized p... 237 2.8e-31 3
UNIPROTKB|F1RH75 - symbol:KDM3B "Uncharacterized protein"... 237 2.9e-31 3
MGI|MGI:1923356 - symbol:Kdm3b "KDM3B lysine (K)-specific... 230 6.5e-31 3
UNIPROTKB|F1NJZ2 - symbol:KDM3B "Uncharacterized protein"... 234 2.2e-30 4
UNIPROTKB|F1SVC8 - symbol:KDM3A "Uncharacterized protein"... 225 7.6e-28 3
UNIPROTKB|E1BFC2 - symbol:KDM3A "Uncharacterized protein"... 225 9.6e-28 3
UNIPROTKB|E2QWU9 - symbol:KDM3A "Uncharacterized protein"... 225 2.4e-27 4
MGI|MGI:98847 - symbol:Kdm3a "lysine (K)-specific demethy... 224 2.5e-27 4
RGD|708351 - symbol:Kdm3a "lysine (K)-specific demethylas... 222 3.0e-27 3
UNIPROTKB|Q5ZIX8 - symbol:KDM3A "Lysine-specific demethyl... 225 4.1e-27 3
UNIPROTKB|Q9Y4C1 - symbol:KDM3A "Lysine-specific demethyl... 225 4.9e-27 4
UNIPROTKB|E1C232 - symbol:KDM3A "Lysine-specific demethyl... 207 5.3e-26 3
UNIPROTKB|Q15652 - symbol:JMJD1C "Probable JmjC domain-co... 187 5.3e-23 4
MGI|MGI:1918614 - symbol:Jmjd1c "jumonji domain containin... 184 1.7e-20 4
MGI|MGI:96223 - symbol:Hr "hairless" species:10090 "Mus m... 167 3.4e-17 4
UNIPROTKB|F1MBI2 - symbol:HR "Uncharacterized protein" sp... 157 2.5e-16 4
UNIPROTKB|O43593 - symbol:HR "Protein hairless" species:9... 154 3.3e-16 4
UNIPROTKB|F1RMB8 - symbol:HR "Uncharacterized protein" sp... 151 2.8e-15 3
RGD|620634 - symbol:Hr "hair growth associated" species:1... 163 2.7e-14 3
UNIPROTKB|F1PFJ6 - symbol:HR "Uncharacterized protein" sp... 142 1.1e-13 5
RGD|708458 - symbol:Jmjd1c "jumonji domain containing 1C"... 176 3.4e-12 1
TAIR|locus:2059206 - symbol:GRF1 "growth-regulating facto... 128 0.00016 1
UNIPROTKB|A2XA73 - symbol:GRF1 "Growth-regulating factor ... 122 0.00046 1
TAIR|locus:2137549 - symbol:GRF2 "growth-regulating facto... 128 0.00058 2
TAIR|locus:2051597 - symbol:GRF6 "growth-regulating facto... 120 0.00071 2
TAIR|locus:2088272 - symbol:GRF5 "growth-regulating facto... 120 0.00077 1
TAIR|locus:2134986 - symbol:GRF8 "growth-regulating facto... 121 0.00084 1
>TAIR|locus:2141221 [details] [associations]
symbol:B160 "AT4G21430" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001841 InterPro:IPR003347
InterPro:IPR014977 Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 KO:K15601 EMBL:AY142484 EMBL:AB493691
IPI:IPI00524203 RefSeq:NP_193874.2 UniGene:At.32630
ProteinModelPortal:Q8H1S7 PRIDE:Q8H1S7 EnsemblPlants:AT4G21430.1
GeneID:827895 KEGG:ath:AT4G21430 TAIR:At4g21430 InParanoid:Q8H1S7
OMA:NILPISH PhylomeDB:Q8H1S7 ProtClustDB:CLSN2719050
ArrayExpress:Q8H1S7 Genevestigator:Q8H1S7 Uniprot:Q8H1S7
Length = 927
Score = 828 (296.5 bits), Expect = 2.6e-208, Sum P(4) = 2.6e-208
Identities = 179/416 (43%), Positives = 250/416 (60%)
Query: 1 MQEEEDLPDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQRKH 60
M E E +PD RC R+DGKQWRC RR +E KK+CE HH Q +++++KV ES K+ R
Sbjct: 1 MSENEIVPDEFRCNRSDGKQWRCKRRALEGKKMCESHHSQQSLKRSKQKVAESSKLVRSR 60
Query: 61 K----KIFKVQQRTEIXXXXXXXXXXXXXXXVIGESEALDEALKKMKLKRGDLQLELIRM 116
+ ++ + V+GE+EA+DEA+KKMKLKRGDLQL+LIRM
Sbjct: 61 RGGGDEVASSEIEPNESRIRSKRLGKSKRKRVMGEAEAMDEAVKKMKLKRGDLQLDLIRM 120
Query: 117 VLKREVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAIS--STNSDNAGTSC 174
VLKREVEKRKR N + + + N S + ELTR LPNG+MAIS S + N + C
Sbjct: 121 VLKREVEKRKRLPNSNNKKKSNGGFSEFVGE--ELTRVLPNGIMAISPPSPTTSNVSSPC 178
Query: 175 AVKIGAEAAAVNRRRFRSKNIEPMPVGTLQVVPYKRDVVSLXXXXXXXXXXXXXXXGQSL 234
VK+G E ++ +RRFRSKNIEP+P+G +QVVP+K D+V+ L
Sbjct: 179 DVKVGEEPISMIKRRFRSKNIEPLPIGKMQVVPFKGDLVNGRKEKKMRCHWCGTRGFGDL 238
Query: 235 IKCSSCRKLFFCVDCVKEWYFDTQEDVKKACPVCRGTCGCKACSSSQYRDIDYKDLLKAN 294
I C SC + FFC+DC+++ ++E+V+K CPVCRG+C CK CS + + KD
Sbjct: 239 ISCLSCEREFFCIDCIEKRNKGSKEEVEKKCPVCRGSCRCKVCSVTNSGVTECKDSQSVR 298
Query: 295 NEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYN-RLYC 353
+++D+VLH HY +CMLLP++++IN + VE+E +A+ K NP+E QI +E + R C
Sbjct: 299 SDIDRVLHLHYAVCMLLPVLKEINAEHKVEVENDAEKKEGNPAEPQIHSSELTSDDRQPC 358
Query: 354 CSCKT-SIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLCKCPNG---RKVC 405
+ + ++VD R C S L L+ +D Q SLS V + KC NG KVC
Sbjct: 359 SNGRDFAVVDLQRMCTRSSSVLRLNSDQDQSQESLSRKVGS--VKCSNGIKSPKVC 412
Score = 775 (277.9 bits), Expect = 2.6e-208, Sum P(4) = 2.6e-208
Identities = 171/392 (43%), Positives = 231/392 (58%)
Query: 398 CPNGR--------KVCTSGVRILEKKSLRTYKEGYGSTYFDSSAASPSWKAPDGTAGILC 449
C NGR ++CT +L S + + S S S K+P +C
Sbjct: 358 CSNGRDFAVVDLQRMCTRSSSVLRLNSDQDQSQESLSRKVGSVKCSNGIKSPK-----VC 412
Query: 450 PPMEFGGCGDS-FLDLRCVFPSCWTKELEINAEQIVGCYELPETIDMSSCCSVCTGMDHE 508
E GC ++ FL L FP T +LEI+AE++V CYELPE +D S C C GM+ +
Sbjct: 413 KRKEVKGCSNNLFLSL---FPLELTSKLEISAEEVVSCYELPEILDKYSGCPFCIGMETQ 469
Query: 509 VDGT-KQLKVAA-IRENSNDNFLFFPTLMDVQGDKLEHFQKHWRKGQPIIVRNVLEVTSD 566
+ LK A+ RE+ NFL++PT++D + LEHFQ HW KG P+IVR+V++ S
Sbjct: 470 SSSSDSHLKEASKTREDGTGNFLYYPTVLDFHQNNLEHFQTHWSKGHPVIVRSVIKSGSS 529
Query: 567 LSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEVEIGVKQLFLGSLRGPKHADMCN 626
L+WDP+ +FC YL N + K+ N T C DWFEVEIGVKQ FLGSLRG + C
Sbjct: 530 LNWDPVALFCHYLMNRNNKTGNT------TDCMDWFEVEIGVKQFFLGSLRGKAETNTCQ 583
Query: 627 EKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPS 686
E+LKL+GWLSS LF+EQFP HYAEI+ LP+ YMDPK G+LNIA LP D GP
Sbjct: 584 ERLKLEGWLSSSLFKEQFPNHYAEILNILPISHYMDPKRGLLNIAANLPDTVQPPDFGPC 643
Query: 687 VYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQT 746
+ ISY SGEE AQ DSV KL ++ CD+V++L + T+ PVST Q+ IR+LM+ + G+ ++
Sbjct: 644 LNISYRSGEEYAQPDSVKKLGFETCDMVDILLYVTETPVSTNQICRIRKLMK-NIGRVRS 702
Query: 747 DSVEVAPEQKMANG-----MGGKSHSDCENKE 773
+ E + G + S SD E+ +
Sbjct: 703 KNPAKGRESRFDKGKKRDRLDDYSSSDSESSQ 734
Score = 391 (142.7 bits), Expect = 2.6e-208, Sum P(4) = 2.6e-208
Identities = 72/119 (60%), Positives = 96/119 (80%)
Query: 861 REDVVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVN 920
++ V HP+L+Q+++LD HK RLKEEF++EPW+F+Q VGEAVI+PAGCPYQIR KSCVN
Sbjct: 800 KKKVSHPLLEQSYYLDEYHKARLKEEFDVEPWSFDQCVGEAVILPAGCPYQIRKNKSCVN 859
Query: 921 VVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIRELTCAE 979
VL F+SPE+V+E I+ + E+ LP K+KANK EV KMA++ I+ AVKEIRELT ++
Sbjct: 860 AVLKFLSPEHVSESIKRVKELNQLPQSVKSKANKIEVKKMAIHKISEAVKEIRELTSSD 918
Score = 72 (30.4 bits), Expect = 2.6e-208, Sum P(4) = 2.6e-208
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 835 DHKNNSNYFIKER-LAESCGAQWDVFRREDV 864
+ + + NY +E L+ + GAQWDVF+++DV
Sbjct: 749 EERESCNYSCEEESLSNTYGAQWDVFQKQDV 779
Score = 38 (18.4 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 127 RQKNFDFEDEENCDNSNYSDSDRELT 152
R F+ E+ E+C NYS + L+
Sbjct: 742 RGSEFEGEERESC---NYSCEEESLS 764
Score = 37 (18.1 bits), Expect = 4.5e-34, Sum P(3) = 4.5e-34
Identities = 9/45 (20%), Positives = 22/45 (48%)
Query: 742 GQHQTDSVEVAPEQKMANGMGGKSHSDCENKEVGLCDVLGEEITR 786
G Q D + + ++++ + ++ + G + +GEE+TR
Sbjct: 111 GDLQLDLIRMVLKREVEKRKRLPNSNNKKKSNGGFSEFVGEELTR 155
>TAIR|locus:2027109 [details] [associations]
symbol:AT1G62310 "AT1G62310" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
ProtClustDB:CLSN2914506 EMBL:AB493515 IPI:IPI00545153
RefSeq:NP_176421.1 UniGene:At.36279 UniGene:At.68585
ProteinModelPortal:C0SV12 SMR:C0SV12 PRIDE:C0SV12
EnsemblPlants:AT1G62310.1 GeneID:842529 KEGG:ath:AT1G62310
TAIR:At1g62310 OMA:LANCEVE PhylomeDB:C0SV12 Genevestigator:C0SV12
Uniprot:C0SV12
Length = 883
Score = 819 (293.4 bits), Expect = 9.3e-119, Sum P(3) = 9.3e-119
Identities = 189/493 (38%), Positives = 275/493 (55%)
Query: 302 HFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEA-EFKYNRLYCCSCKTSI 360
H YLI ++LP + +++ Q +E+E EA ++G+ PSEV+I A + R+YC C TSI
Sbjct: 286 HLQYLITLMLPFLNKLSIFQKLEIEFEATVQGKLPSEVEITAAISYTDERVYCDHCATSI 345
Query: 361 VDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLCKCPNGRKVCTSGVRILEKKSLRTY 420
VD HRSC CSY LCL CC++I +GSLS + G + G+ E SL
Sbjct: 346 VDLHRSCPKCSYELCLKCCQEIREGSLSERPEMKFHYVDRGHRYM-HGLDAAEP-SL--- 400
Query: 421 KEGYGSTYFDSSAASPS---WKAPDGTAGILCPPMEFGGCGDSFLDLRCVFPSCWTKELE 477
S+ F+ A+PS W + I C P + GGCG+ L+LR + P W +LE
Sbjct: 401 -----SSTFEDEEANPSDAKWSLGEN-GSITCAPEKLGGCGERMLELRRILPLTWMSDLE 454
Query: 478 INAEQIVGCYELPETIDMSSCCSVCTGMDHEVDGTKQLKVAAIRENSNDNFLFFPTLMDV 537
AE + Y + M +C C+ ++ E+ T++ +A R S+DN+LF P + V
Sbjct: 455 HKAETFLSSYNISPR--MLNCR--CSSLETEL--TRK---SASRTTSSDNYLFCPESLGV 505
Query: 538 -QGDKLEHFQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEET 596
+ ++L HFQ+HW KG+P+IVRN L+ T LSW+P+VM+ +N + S ++ V+
Sbjct: 506 LKEEELLHFQEHWAKGEPVIVRNALDNTPGLSWEPMVMWRALCENVNSTSSSEMSQVKAI 565
Query: 597 GCSDWFEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLP 656
C EVEI +Q F G +G + + E LKLK W S F++ P H E I LP
Sbjct: 566 DCLANCEVEINTRQFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALP 625
Query: 657 LPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNV 716
EY DP+TG+LNIATKLP+ F DLGP YI+Y +EL + DSVTKL D+ D VN+
Sbjct: 626 FQEYSDPRTGILNIATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNI 685
Query: 717 LAHTTDVPVSTKQLNNIRELMQGHTGQHQTD--SVEVA--PEQKMANGMGGKSHSDCENK 772
L HT +V +S +Q+++++ L Q H Q++ D S E E++ + S EN+
Sbjct: 686 LTHTAEVTLSQEQISSVKALKQKHKLQNKVDKQSTEDCNEKEEEEEEELNMPEISSNENE 745
Query: 773 EVG--LCDVLGEE 783
E G L D+ E
Sbjct: 746 ETGSALWDIFRRE 758
Score = 436 (158.5 bits), Expect = 3.5e-68, Sum P(3) = 3.5e-68
Identities = 96/277 (34%), Positives = 148/277 (53%)
Query: 233 SLIKCSSCRKLFFCVDCVKEWYFD-TQEDVKKACPVCRGTCGCKACSS-SQYRDIDYKDL 290
+L+ CS C K FC+ C+++WY + +++DV + CP+CR C C C + + ++L
Sbjct: 219 TLLICSECEKTMFCLQCIRKWYPNLSEDDVVEKCPLCRQNCNCSKCLHLNGLIETSKREL 278
Query: 291 LKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEA-EFKYN 349
K+ ++ H YLI ++LP + +++ Q +E+E EA ++G+ PSEV+I A +
Sbjct: 279 AKS----ERRHHLQYLITLMLPFLNKLSIFQKLEIEFEATVQGKLPSEVEITAAISYTDE 334
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLCKCPNGRKVCTSGV 409
R+YC C TSIVD HRSC CSY LCL CC++I +GSLS + G + G+
Sbjct: 335 RVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIREGSLSERPEMKFHYVDRGHRYM-HGL 393
Query: 410 RILEKKSLRTYKEGYGSTYFDSSAASPS---WKAPDGTAGILCPPMEFGGCGDSFLDLRC 466
E SL S+ F+ A+PS W + I C P + GGCG+ L+LR
Sbjct: 394 DAAEP-SL--------SSTFEDEEANPSDAKWSLGEN-GSITCAPEKLGGCGERMLELRR 443
Query: 467 VFPSCWTKELEINAEQIVGCYELPETIDMSSCCSVCT 503
+ P W +LE AE + Y + + C S+ T
Sbjct: 444 ILPLTWMSDLEHKAETFLSSYNISPRMLNCRCSSLET 480
Score = 320 (117.7 bits), Expect = 9.3e-119, Sum P(3) = 9.3e-119
Identities = 56/99 (56%), Positives = 75/99 (75%)
Query: 864 VVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVL 923
V HPI DQ+ +L HK +LK E+ IEPWTF Q +GEAV IPAGCP+Q+RNLKSC V +
Sbjct: 785 VYHPIHDQSCYLTLEHKRKLKAEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAV 844
Query: 924 DFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMAL 962
DF+SPEN+ EC++L +E R LP +HKA+ +K E + ++L
Sbjct: 845 DFVSPENIHECLRLTEEFRQLPKNHKAREDKLEASLLSL 883
Score = 65 (27.9 bits), Expect = 9.3e-119, Sum P(3) = 9.3e-119
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 821 NQNSKKSEKRMHFKDHKNNSNYFIKERLAESCGAQWDVFRREDVVHPILDQ 871
N+ ++ E+ ++ + +N N E+ A WD+FRREDV P L++
Sbjct: 724 NEKEEEEEEELNMPEISSNEN-------EETGSALWDIFRREDV--PKLEE 765
Score = 48 (22.0 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 109 LQLELIRMVLKREVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSD 168
L E I V K +K K Q D + E+C N + + EL +P ISS ++
Sbjct: 694 LSQEQISSV-KALKQKHKLQNKVDKQSTEDC-NEKEEEEEEELN--MPE----ISSNENE 745
Query: 169 NAGTS 173
G++
Sbjct: 746 ETGSA 750
Score = 47 (21.6 bits), Expect = 2.7e-66, Sum P(3) = 2.7e-66
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 816 LGCGTNQNSKKSEKRMHFKDH-KNNSNYFIKERLAESCGAQWD 857
L C + K E+ +HF++H ++ L + G W+
Sbjct: 497 LFCPESLGVLKEEELLHFQEHWAKGEPVIVRNALDNTPGLSWE 539
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 561 LEVTSDLSWDPIVMFCTYLKNSSLKS 586
+EV D W+ V C+ +K +S +S
Sbjct: 135 VEVDEDEEWEEEVTLCSKIKATSSRS 160
Score = 39 (18.8 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 675 PQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNV 716
P F LG +V+I ++ S TK+ D N+
Sbjct: 812 PWTF-VQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENI 852
Score = 39 (18.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 47 REKVPESLKIQRKHKKIFK 65
RE VP+ + RKH K F+
Sbjct: 757 REDVPKLEEYLRKHCKEFR 775
>TAIR|locus:2125221 [details] [associations]
symbol:AT4G00990 "AT4G00990" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0008270 eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
EMBL:AY072204 EMBL:AY096708 IPI:IPI00545540 RefSeq:NP_192008.3
UniGene:At.3531 ProteinModelPortal:Q8VYB9 PaxDb:Q8VYB9 PRIDE:Q8VYB9
EnsemblPlants:AT4G00990.1 GeneID:827933 KEGG:ath:AT4G00990
TAIR:At4g00990 InParanoid:Q8VYB9 OMA:GYLEGRM PhylomeDB:Q8VYB9
ProtClustDB:CLSN2918567 Genevestigator:Q8VYB9 Uniprot:Q8VYB9
Length = 840
Score = 708 (254.3 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 216/664 (32%), Positives = 309/664 (46%)
Query: 243 LFFCVDCVKEWY-FDT--QEDVKKACPVCRGTCG-CK-ACSSSQYRDIDYKDLLKANNEV 297
L FC C K+ Y FD + ++ R C C C + ++K +E
Sbjct: 92 LIFCSKCNKKCYCFDCIKRSYSERTHEEVRAACPFCMMTCICRACLRLPL--VIKPPSEK 149
Query: 298 D---KVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYNRLYCC 354
D K+ YL+ +LP+++ I +QN ELEIE+ I+G +E I+ + + C
Sbjct: 150 DTDVKLKQLQYLLVKVLPVLKDIYTEQNRELEIESTIRGHPVTEANIKRCKLDPSERIYC 209
Query: 355 SCKTSIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLCKCPNGRKVCTSGVRILEK 414
+ + SC +C DI LS C + G G + E
Sbjct: 210 DLCRTSIANFHR--SCPNK---NCSVDIC---LSCCK-----ELSEGFHQERDGKKNAEG 256
Query: 415 KSLRT-YKEGYGSTYFDSSAASP----SWKAPDGTAGILCPPMEFGGCGDSFLDLRCVFP 469
K G G DS A P +WK + + I CPP E GGCG S L+LR ++
Sbjct: 257 KGYECRIPAGQGK---DSDAYVPLHFSTWKL-NSDSSIPCPPKECGGCGTSTLELRRLWK 312
Query: 470 SCWTKELEINAEQIVGCYELPETIDMSSCCSVCTGMDHEVDGTKQLKVAAIRENSNDNFL 529
W ++L NAE+ + P +D+ CS C+ + +Q AA R+N++DNFL
Sbjct: 313 RDWVEKLITNAEKCTLNFR-PTDVDIVHECSSCSTNSDSI--RRQ---AAFRKNAHDNFL 366
Query: 530 FFPTLMDVQGDKLEHFQKHWRKGQPIIVRNVLEVTSDLSWDPIVMF--CTYLKNSSLKSE 587
+ P +D+ D + HFQ HW K +P+IVRNVLE TS LSW+P+VM+ C + +E
Sbjct: 367 YSPNAVDLAEDDIAHFQFHWMKAEPVIVRNVLEKTSGLSWEPMVMWRACREMDPKRKGTE 426
Query: 588 NDGGAVEETGCSDWFEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAH 647
+ V+ C DW EVEI + Q F G L G H + E LKLK W S LF+++ P H
Sbjct: 427 EETTKVKALDCLDWCEVEINLHQFFEGYLEGRMHKNGWPEMLKLKDWPPSDLFEKRLPRH 486
Query: 648 YAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLC 707
AE I LP +Y DPK+G+LN+AT+ P+ DLGP YI+Y EEL + DSVTKL
Sbjct: 487 NAEFIAALPFFDYTDPKSGILNLATRFPEGSLKPDLGPKTYIAYGFHEELNRGDSVTKLH 546
Query: 708 YDLCDVVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAPEQKMANGMGGKSHS 767
D+ D VNVL HT V + + NI+ + Q + + + + K A+ + KS
Sbjct: 547 CDISDAVNVLTHTAKVEIPPVKYQNIK-VHQKKYAEAMLQKQQYSGQVKEASELENKSMK 605
Query: 768 DCENKEVGLCDVLGEEITRHEAGDLNVRDRNXXXXXXXXXXXXXXXLILGCGTNQNSKKS 827
+ + + L D E E + + R T+ S +
Sbjct: 606 EVDESKKDLKDKAANE----EQSNNSSRPSGSGEAEKVIISKEDNPTQPAVSTSVESIQE 661
Query: 828 EKRMHFKDHKNNSNYFIKERLAESCGAQWDVFRREDVVHPILDQNFFLDATHKMRLKEEF 887
+K K+ N+N K A GA WD+FRREDV P L Q F H+ R F
Sbjct: 662 QKLDAPKETDGNTNERSK---AVHGGAVWDIFRREDV--PKLIQ-FLKRHEHEFR---HF 712
Query: 888 EIEP 891
EP
Sbjct: 713 NNEP 716
Score = 379 (138.5 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 65/114 (57%), Positives = 89/114 (78%)
Query: 862 EDVVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNV 921
E V+HPI DQ FL + K +LKEEF+IEPWTFEQH+GEAV IPAGCP+Q+RN +SC+ V
Sbjct: 718 ESVIHPIHDQTMFLSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKV 777
Query: 922 VLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIREL 975
LDF++PE+V EC++L E R LP DH + +K E+ K+ALYA ++A++E++ L
Sbjct: 778 ALDFVAPESVEECLRLTQEFRRLPKDHSSSEDKLELKKIALYAASSAIREVKGL 831
Score = 370 (135.3 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 92/275 (33%), Positives = 143/275 (52%)
Query: 234 LIKCSSCRKLFFCVDCVKEWYFD-TQEDVKKACPVCRGTCGCKACSSSQYRDIDYKDLLK 292
LI CS C K +C DC+K Y + T E+V+ ACP C TC C+AC + K +
Sbjct: 92 LIFCSKCNKKCYCFDCIKRSYSERTHEEVRAACPFCMMTCICRACLRLP---LVIKPPSE 148
Query: 293 ANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYN-RL 351
+ +V K+ YL+ +LP+++ I +QN ELEIE+ I+G +E I+ + + R+
Sbjct: 149 KDTDV-KLKQLQYLLVKVLPVLKDIYTEQNRELEIESTIRGHPVTEANIKRCKLDPSERI 207
Query: 352 YCCSCKTSIVDYHRSCAS--CSYTLCLSCCRDILQGSLSGCVRARLCKCPNGRKVCTS-G 408
YC C+TSI ++HRSC + CS +CLSCC+++ +G + R +G+K G
Sbjct: 208 YCDLCRTSIANFHRSCPNKNCSVDICLSCCKELSEGFH----QER-----DGKKNAEGKG 258
Query: 409 VRILEKKSLRTYKEGYGSTYFDSSAASPSWKAPDGTAGILCPPMEFGGCGDSFLDLRCVF 468
+ Y +F + WK + + I CPP E GGCG S L+LR ++
Sbjct: 259 YECRIPAGQGKDSDAYVPLHFST------WKL-NSDSSIPCPPKECGGCGTSTLELRRLW 311
Query: 469 PSCWTKELEINAEQIVGCYELPETIDMSSCCSVCT 503
W ++L NAE+ + P +D+ CS C+
Sbjct: 312 KRDWVEKLITNAEKCTLNFR-PTDVDIVHECSSCS 345
Score = 37 (18.1 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 47 REKVPESLKIQRKHKKIFK 65
RE VP+ ++ ++H+ F+
Sbjct: 692 REDVPKLIQFLKRHEHEFR 710
>TAIR|locus:2036014 [details] [associations]
symbol:AT1G09060 "AT1G09060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 InterPro:IPR014977
Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018866 Pfam:PF10497 KO:K15601
IPI:IPI00656590 RefSeq:NP_001031007.1 UniGene:At.10382
ProteinModelPortal:F4HZD1 PRIDE:F4HZD1 EnsemblPlants:AT1G09060.3
GeneID:837427 KEGG:ath:AT1G09060 OMA:MNWVAKL PhylomeDB:F4HZD1
Uniprot:F4HZD1
Length = 944
Score = 387 (141.3 bits), Expect = 1.1e-98, Sum P(5) = 1.1e-98
Identities = 112/406 (27%), Positives = 195/406 (48%)
Query: 361 VDYHRSCASCSYTLCLSCCRDILQGSLSGCVRAR--LCK--CPNGRKVCTSGVRILEKKS 416
+D R+ +C + CR + C LC C + R+ S V I
Sbjct: 331 IDLVRARLKADEQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLRE--ESSVTISGTNQ 388
Query: 417 LRTYKEGYGSTYFDSSAASPSWKAPDGTAGILCPPMEFGGCGDSFLDLRCVFPSCWTKEL 476
++G + S P W+A +G I CPP E+GGCG L+L +F W +L
Sbjct: 389 NVQDRKGAPKLKLNFSYKFPEWEA-NGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKL 447
Query: 477 EINAEQIV-GCYELPETIDMSSCCSVCTGMDHEVDGTKQLKVAAIRENSNDNFLFFPTLM 535
NAE+IV GC +L + ++ C S + K A RE S DN+++ P+L
Sbjct: 448 VKNAEEIVSGC-KLSDLLNPDMCDS------------RFCKFAE-REESGDNYVYSPSLE 493
Query: 536 DVQGDKLEHFQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEE 595
++ D + F++ W +G+ + V+ VL+ +S WDP ++ + S K ++
Sbjct: 494 TIKTDGVAKFEQQWAEGRLVTVKMVLDDSSCSRWDPETIWRDIDELSDEKLREHDPFLKA 553
Query: 596 TGCSDWFEVEIGVKQLFLGSLRGPKHADMCNEKL-KLKGWLSSRLFQEQFPAHYAEIIRG 654
C D EV++ + + F + + K+ + L KLK W S +E E IR
Sbjct: 554 INCLDGLEVDVRLGE-FTRAYKDGKNQETGLPLLWKLKDWPSPSASEEFIFYQRPEFIRS 612
Query: 655 LPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVV 714
P EY+ P+ G+LN+A KLP +D GP +Y+S + +E++ DS+T + Y++ D+V
Sbjct: 613 FPFLEYIHPRLGLLNVAAKLPHYSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMV 672
Query: 715 NVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAPEQKMANG 760
+L HT++ + +++ + + + + + ++PEQK+ +G
Sbjct: 673 YLLVHTSE-ETTFERVRKTKPVPEEPDQKMSENESLLSPEQKLRDG 717
Score = 321 (118.1 bits), Expect = 1.1e-98, Sum P(5) = 1.1e-98
Identities = 59/113 (52%), Positives = 83/113 (73%)
Query: 863 DVVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVV 922
D V L + FL+ HK +L++EF +EPWTFEQH GEA+ IPAGCP+QI NL+S + V
Sbjct: 794 DFVSRPLYEGLFLNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQITNLQSNIQVA 853
Query: 923 LDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIREL 975
LDF+ PE+V E +L +EIR LP DH+AK E+ K++LYA ++A+KE+++L
Sbjct: 854 LDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAIKEVQKL 906
Score = 293 (108.2 bits), Expect = 1.1e-98, Sum P(5) = 1.1e-98
Identities = 54/157 (34%), Positives = 93/157 (59%)
Query: 232 QSLIKCSSCRKLFFCVDCVKEWYFDTQ-EDVKKACPVCRGTCGCKACSSSQYRDIDYKDL 290
+ +I C C + FC +C+ Y + E+V+K CP CRG C CK+C S D K
Sbjct: 229 ERIISCLKCNQRAFCHNCLSARYSEISLEEVEKVCPACRGLCDCKSCLRS---DNTIKVR 285
Query: 291 LKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYNR 350
++ +DK+ + + L+ +LP+++QI+ +Q +E+E+E +++ E+ + A K +
Sbjct: 286 IREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELEKRLR---EVEIDLVRARLKADE 342
Query: 351 LYCCS-CKTSIVDYHRSCASCSYTLCLSCCRDILQGS 386
CC+ C+ +VDY+R C +CSY LCL CC+D+ + S
Sbjct: 343 QMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLREES 379
Score = 136 (52.9 bits), Expect = 1.1e-98, Sum P(5) = 1.1e-98
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 7 LPDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
+PD LRCKR+DGKQWRC M DK +CE H++Q + R
Sbjct: 38 IPDDLRCKRSDGKQWRCTAMSMADKTVCEKHYIQAKKR 75
Score = 68 (29.0 bits), Expect = 1.1e-98, Sum P(5) = 1.1e-98
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 837 KNNSNYFIKERLAESC--GAQWDVFRREDV 864
+N N ++ SC GAQWDVFRR+DV
Sbjct: 747 ENGDN--MESSCTSSCAGGAQWDVFRRQDV 774
Score = 40 (19.1 bits), Expect = 8.9e-36, Sum P(4) = 8.9e-36
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 697 LAQADSVTKLCYDLCDVVNVLAHTTDVPVSTKQL 730
L + + V C LCD + L + V +++
Sbjct: 256 LEEVEKVCPACRGLCDCKSCLRSDNTIKVRIREI 289
>TAIR|locus:2008875 [details] [associations]
symbol:AT1G11950 "AT1G11950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG305537 KO:K15601 EMBL:AB493451 IPI:IPI00542320
RefSeq:NP_172659.3 UniGene:At.42102 ProteinModelPortal:C0SUU8
PRIDE:C0SUU8 EnsemblPlants:AT1G11950.1 GeneID:837747
KEGG:ath:AT1G11950 TAIR:At1g11950 HOGENOM:HOG000243122 OMA:NHCATSI
PhylomeDB:C0SUU8 ProtClustDB:CLSN2914506 Genevestigator:C0SUU8
Uniprot:C0SUU8
Length = 875
Score = 593 (213.8 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 152/466 (32%), Positives = 236/466 (50%)
Query: 293 ANNEVDKVLHFHYLICMLLPIVRQINQ-DQNVELEIEAKIKGQNPSEVQIQEAEFKYNRL 351
+ ++DK F++L +++ ++ + + + + EIE + K Q+ Q+ +E
Sbjct: 258 SKRKLDKYERFYHLRFLIVAMLPFLKKLCKAQDQEIETEAKVQDSMASQVDISES----- 312
Query: 352 YCCSCKTSIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRAR---LCKCPNGR-KVCTS 407
CS + + H CA+ L SC + + L+ C R L P + +
Sbjct: 313 -LCSNEERVFCNH--CATSIVDLHRSCPKCSYELCLNCCQEIRGGWLSDRPECQLQFEYR 369
Query: 408 GVRILEKKSLRTYKEGYGSTYFDSSAASPS--WKAPDGTAGILCPPMEFGGCGDSFLDLR 465
G R + ++ E S+ + +PS W A D I C P E GGCGDS L+L+
Sbjct: 370 GTRYIHGEAA----EPSSSSVSEDETKTPSIKWNA-DENGSIRCAPKELGGCGDSVLELK 424
Query: 466 CVFPSCWTKELEINAEQIVGCYELPETIDMSSCCSVCTGMDHEVDGTKQLKVAAIRENSN 525
+ P W +LE AE + Y + + C S + M + AA R+ S+
Sbjct: 425 RILPVTWMSDLEQKAETFLASYSIKPPMSYCRCSSDMSSMKRK---------AASRDGSS 475
Query: 526 DNFLFFPTLMDV-QGDKLEHFQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSL 584
DN+L+ P +DV + ++L HFQ+HW KG+P+IVRN L T+ LSW+P+VM+ +N
Sbjct: 476 DNYLYSPDSLDVLKQEELLHFQEHWSKGEPVIVRNALNNTAGLSWEPMVMWRALCENVDS 535
Query: 585 KSENDGGAVEETGCSDWFEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQF 644
++ V+ C EV+I F G +G + + E LKLK W S F+
Sbjct: 536 AISSNMSDVKAIDCLANCEVKINTLCFFEGYSKGRTYENFWPEMLKLKDWPPSDKFENLL 595
Query: 645 PAHYAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVT 704
P H E I LP EY DP++G+LNIATKLP+ DLGP Y++Y + +EL + DSVT
Sbjct: 596 PRHCDEFISALPFQEYSDPRSGILNIATKLPEGLLKPDLGPKTYVAYGTSDELGRGDSVT 655
Query: 705 KLCYDLCDVVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVE 750
KL D+ D VN+L HT +V +S +Q + I +L Q H Q++ + E
Sbjct: 656 KLHCDMSDAVNILMHTAEVTLSEEQRSAIADLKQKHKQQNEKELQE 701
Score = 405 (147.6 bits), Expect = 2.9e-70, Sum P(4) = 2.9e-70
Identities = 92/277 (33%), Positives = 140/277 (50%)
Query: 234 LIKCSSCRKLFFCVDCVKEWYFD-TQEDVKKACPVCRGTCGCKAC-SSSQYRDIDYKDLL 291
L C+ C +C C+K+WY + +D+ + CP CRGTC C C SS + + L
Sbjct: 204 LFICTFCEVRLYCFPCIKKWYPHLSTDDILEKCPFCRGTCNCCTCLHSSGLIETSKRKL- 262
Query: 292 KANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYN-R 350
++ ++ H +LI +LP ++++ + Q+ E+E EAK++ S+V I E+ R
Sbjct: 263 ---DKYERFYHLRFLIVAMLPFLKKLCKAQDQEIETEAKVQDSMASQVDISESLCSNEER 319
Query: 351 LYCCSCKTSIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLCKCPNGRKVCTSGVR 410
++C C TSIVD HRSC CSY LCL+CC++I G LS +L + G R
Sbjct: 320 VFCNHCATSIVDLHRSCPKCSYELCLNCCQEIRGGWLSDRPECQL-------QFEYRGTR 372
Query: 411 ILEKKSLRTYKEGYGSTYFDSSAASPS--WKAPDGTAGILCPPMEFGGCGDSFLDLRCVF 468
+ ++ E S+ + +PS W A D I C P E GGCGDS L+L+ +
Sbjct: 373 YIHGEAA----EPSSSSVSEDETKTPSIKWNA-DENGSIRCAPKELGGCGDSVLELKRIL 427
Query: 469 PSCWTKELEINAEQIVGCYELPETIDMSSCCSVCTGM 505
P W +LE AE + Y + + C S + M
Sbjct: 428 PVTWMSDLEQKAETFLASYSIKPPMSYCRCSSDMSSM 464
Score = 379 (138.5 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 66/112 (58%), Positives = 85/112 (75%)
Query: 864 VVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVL 923
V HPI DQ++FL HK +LK EF IEPWTF Q +GEAV IPAGCP+Q+RNLKSC V +
Sbjct: 759 VYHPIHDQSYFLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAV 818
Query: 924 DFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIREL 975
DF+SPEN+ EC++L DE R LP +HKA+ +K E+ KM +YA+ A+KE+ L
Sbjct: 819 DFVSPENIDECLRLTDEFRQLPKNHKAREDKLEIKKMVIYAVEQALKEVETL 870
Score = 65 (27.9 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 822 QNSKKSEKRMHFKDHKNNSNYFIKERLAESCGAQWDVFRREDVVHPILDQ 871
QN K+ +++ ++ + S+ + E+ GA WD+F+REDV P L++
Sbjct: 694 QNEKELQEQNGLEEEEVVSDEIVV--YDETSGALWDIFKREDV--PKLEE 739
Score = 49 (22.3 bits), Expect = 1.3e-68, Sum P(4) = 1.3e-68
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 826 KSEKRMHFKDHKNNSN-YFIKERLAESCGAQWD 857
K E+ +HF++H + ++ L + G W+
Sbjct: 489 KQEELLHFQEHWSKGEPVIVRNALNNTAGLSWE 521
Score = 39 (18.8 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 675 PQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNV 716
P F LG +V+I ++ S TK+ D N+
Sbjct: 786 PWTF-VQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENI 826
Score = 37 (18.1 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 21 WRCNRRVMEDKKLCE 35
W+ V++D+K CE
Sbjct: 104 WKEEEVVVDDEKKCE 118
>FB|FBgn0037703 [details] [associations]
symbol:JHDM2 "JmjC domain-containing histone demethylase 2"
species:7227 "Drosophila melanogaster" [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0005634
"nucleus" evidence=ISM] [GO:0032452 "histone demethylase activity"
evidence=ISM] [GO:0016577 "histone demethylation" evidence=ISM]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
EMBL:AE014297 GO:GO:0005634 GeneTree:ENSGT00530000063039
eggNOG:NOG305537 GO:GO:0032452 KO:K15601 EMBL:BT003787
RefSeq:NP_788611.1 UniGene:Dm.26190 MINT:MINT-1601605
EnsemblMetazoa:FBtr0082063 GeneID:41143 KEGG:dme:Dmel_CG8165
UCSC:CG8165-RA CTD:41143 FlyBase:FBgn0037703 InParanoid:Q9VHC5
OMA:SHTNHED OrthoDB:EOG4XPNWR GenomeRNAi:41143 NextBio:822388
Uniprot:Q9VHC5
Length = 854
Score = 221 (82.9 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 44/107 (41%), Positives = 64/107 (59%)
Query: 859 FRREDVVHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSC 918
FR E PI DQN++LD + RL +E+ +E Q +G+AV IPAG P+Q++NL +C
Sbjct: 723 FRLEPDHDPIHDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNC 782
Query: 919 VNVVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAI 965
+ V DF+SPEN+T C L E R L H +K ++ + +AI
Sbjct: 783 IKVAEDFVSPENITHCYHLTHEFRRLSHSHTNHEDKLQIKNIIYHAI 829
Score = 191 (72.3 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 60/178 (33%), Positives = 86/178 (48%)
Query: 545 FQKHWRKGQPIIVRNVLE-VTSDLSWDPIVMFCTYL--KNSSLKSENDGGAVEETGCSDW 601
FQ+ W+ GQP+++ V + DL W P FC K + L + +G V +
Sbjct: 490 FQEVWKCGQPVMISEVARSLNLDL-WHPQA-FCRDFGDKPNDLINCLNGNLVPNQPMRHF 547
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
+E G Q L M LKLK W F E P +A++++GLP+PEY
Sbjct: 548 WE---GF-QCMTKRLPDAYGKPML---LKLKDWPPGDDFAEILPTRFADLMKGLPMPEYT 600
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+TG LNIA+ LP+ F DLGP +Y +Y G L T L D+ D VN++ +
Sbjct: 601 -LRTGNLNIASCLPKMFVPPDLGPKMYNAY--GSALHPDKGTTNLHLDISDAVNIMVY 655
Score = 92 (37.4 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 326 EIEAKIKGQNPSEVQIQEAEFKYNRLYCCSCKTSIVDYHRSCASCSYTLCLSCCRDILQG 385
E EA QN + K R C C T++ +YH +C C + +CL C +D +G
Sbjct: 216 EAEALSLHQNTDGTIAWKKAVKGTREICDVCDTTLFNYHWTCRKCGFGVCLDCVKDRKEG 275
Score = 47 (21.6 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 239 SCRKLFF--CVDCVKE 252
+CRK F C+DCVK+
Sbjct: 256 TCRKCGFGVCLDCVKD 271
Score = 42 (19.8 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 853 GAQWDVFRREDVVHPILDQNFFLDATHKMRLKEEFEIEP 891
GA W +F P D + D +++ L++ F +EP
Sbjct: 696 GALWHIF-------PARDADKIRDLLNRVTLEKGFRLEP 727
Score = 37 (18.1 bits), Expect = 8.8e-28, Sum P(3) = 8.8e-28
Identities = 14/67 (20%), Positives = 29/67 (43%)
Query: 276 ACSSSQYRDIDYKDL-LKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQ 334
A +S+ R I + + ++ H + LPI R + +N L+ E +++ +
Sbjct: 11 ATRTSRKRTISSTSFSISTRTDPKSIIEIH-IFNDSLPIKRACCEVENPTLKAEQRVQQE 69
Query: 335 NPSEVQI 341
S Q+
Sbjct: 70 EESLGQV 76
>UNIPROTKB|Q7LBC6 [details] [associations]
symbol:KDM3B "Lysine-specific demethylase 3B" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 EMBL:CH471062 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 eggNOG:NOG305537 KO:K15601
EMBL:AF251039 EMBL:AF338242 EMBL:AB029005 EMBL:AC104116
EMBL:AC113403 EMBL:BC000539 EMBL:BC001202 EMBL:BC146788
IPI:IPI00298935 IPI:IPI00748132 IPI:IPI00749486 RefSeq:NP_057688.2
UniGene:Hs.483486 ProteinModelPortal:Q7LBC6 IntAct:Q7LBC6
MINT:MINT-1195273 STRING:Q7LBC6 PhosphoSite:Q7LBC6 DMDM:308153456
PaxDb:Q7LBC6 PRIDE:Q7LBC6 Ensembl:ENST00000314358
Ensembl:ENST00000394866 GeneID:51780 KEGG:hsa:51780 UCSC:uc003lcy.1
UCSC:uc010jew.1 CTD:51780 GeneCards:GC05P137688 HGNC:HGNC:1337
HPA:HPA016610 MIM:609373 neXtProt:NX_Q7LBC6 PharmGKB:PA25918
InParanoid:Q7LBC6 OMA:IICKRLR OrthoDB:EOG4W9J32 GenomeRNAi:51780
NextBio:55912 ArrayExpress:Q7LBC6 Bgee:Q7LBC6 CleanEx:HS_JMJD1B
Genevestigator:Q7LBC6 GermOnline:ENSG00000120733 Uniprot:Q7LBC6
Length = 1761
Score = 237 (88.5 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD T + RL EE+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1646 PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1705
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1706 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1752
Score = 182 (69.1 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 545 FQKHWRKGQPIIVRNV-LEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSD-W 601
F++ W++GQP++V V ++ S+L W P + ++ L + + + + D W
Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSEL-WKPEAFSQEFGDQDVDLVNCRNCAIISDVKVRDFW 1463
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L R M LKLK W F++ P + +++ LPLPEY
Sbjct: 1464 DGFEIICKRL-----RSEDGQPMV---LKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1515
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1516 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYV- 1573
Query: 722 DVPV 725
+P+
Sbjct: 1574 GIPI 1577
Score = 76 (31.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 63/281 (22%), Positives = 103/281 (36%)
Query: 118 LKR-EVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSDNAGTSCAV 176
+KR +++R D + N D S+ SDS+ +L + GL I G +
Sbjct: 794 VKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQL--QAKTGLKGIPEHLMGKLGPN--- 848
Query: 177 KIGAEAAAVNRRRFRSKNIEPMPVGTLQVVPYKRDVVSLXXXXXXXXXXXXXXXGQSLIK 236
G +A + + + K P G + P K V G+ ++
Sbjct: 849 --GERSAELLLGKSKGKQA---PKGRPRTAPLK---VGQSVLKDVSKVKKLKQSGEPFLQ 900
Query: 237 CSSCRK----LFFCVDCVKEWY--FDTQE--DVKKACPVC---------RGTCGCKACSS 279
SC L C +C E Y F QE D AC +G + S
Sbjct: 901 DGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLS 960
Query: 280 SQYRDIDYKDLLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEV 339
Q D D +L ++ + + + +L + Q Q V E EA + + +V
Sbjct: 961 PQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQ--LVMSEKEAMMMVEPHQKV 1018
Query: 340 QIQEAEFKYNRLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
+ A + R C C+T++ + H C C + +CL C R
Sbjct: 1019 AWKRA-VRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYR 1058
Score = 41 (19.5 bits), Expect = 9.5e-28, Sum P(3) = 9.5e-28
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 131 FDFEDEENCDNSNYSDSDRELTRELPNGLM---AISSTNS---DNAGTSCAVKIGAEA 182
F E D+S+ DS ++ L +GL ++ T++ AG+S K+ AE+
Sbjct: 540 FTTVSESLADDSSSRDSFKQSLESLSSGLCKGRSVLGTDTKPGSKAGSSVDRKVPAES 597
Score = 39 (18.8 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 38 HLQGRHRQNREKVPESLKIQRKHKKIFKVQQRT 70
HL G+ N E+ E L + K K+ K + RT
Sbjct: 840 HLMGKLGPNGERSAELLLGKSKGKQAPKGRPRT 872
>UNIPROTKB|E1BE97 [details] [associations]
symbol:LOC100848816 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 KO:K15601 OMA:IICKRLR
EMBL:DAAA02020398 IPI:IPI00825479 RefSeq:XP_003582470.1
RefSeq:XP_003586349.1 Ensembl:ENSBTAT00000013278 GeneID:100848816
KEGG:bta:100848816 Uniprot:E1BE97
Length = 1759
Score = 237 (88.5 bits), Expect = 2.8e-31, Sum P(3) = 2.8e-31
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD T + RL EE+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1644 PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1703
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1704 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1750
Score = 182 (69.1 bits), Expect = 2.8e-31, Sum P(3) = 2.8e-31
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 545 FQKHWRKGQPIIVRNV-LEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSD-W 601
F++ W++GQP++V V ++ S+L W P + ++ L + + + + D W
Sbjct: 1403 FRECWKQGQPVLVSGVHKKLKSEL-WKPEAFSQEFGDQDVDLVNCRNCAIISDVKVRDFW 1461
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L R M LKLK W F++ P + +++ LPLPEY
Sbjct: 1462 DGFEIICKRL-----RSEDGQPMV---LKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1513
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1514 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYV- 1571
Query: 722 DVPV 725
+P+
Sbjct: 1572 GIPI 1575
Score = 75 (31.5 bits), Expect = 2.8e-31, Sum P(3) = 2.8e-31
Identities = 63/281 (22%), Positives = 103/281 (36%)
Query: 118 LKR-EVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSDNAGTSCAV 176
+KR +++R D + N D S+ SDS+ +L + GL I G +
Sbjct: 792 VKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQL--QAKTGLKGIPEHLMGKLGPN--- 846
Query: 177 KIGAEAAAVNRRRFRSKNIEPMPVGTLQVVPYKRDVVSLXXXXXXXXXXXXXXXGQSLIK 236
G +A + + + K P G + P K V G+ ++
Sbjct: 847 --GERSAELLLGKGKGKQA---PKGRPRTAPLK---VGQSVLKDVSKVKKLKQSGEPFLQ 898
Query: 237 CSSCRK----LFFCVDCVKEWY--FDTQE--DVKKACPVC---------RGTCGCKACSS 279
SC L C +C E Y F QE D AC +G + S
Sbjct: 899 DGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLS 958
Query: 280 SQYRDIDYKDLLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEV 339
Q D D +L ++ + + + +L + Q Q V E EA + + +V
Sbjct: 959 PQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQ--LVMSEKEAMMMVEPHQKV 1016
Query: 340 QIQEAEFKYNRLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
+ A + R C C+T++ + H C C + +CL C R
Sbjct: 1017 AWKRA-VRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYR 1056
Score = 38 (18.4 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 38 HLQGRHRQNREKVPESLKIQRKHKKIFKVQQRT 70
HL G+ N E+ E L + K K+ K + RT
Sbjct: 838 HLMGKLGPNGERSAELLLGKGKGKQAPKGRPRT 870
>UNIPROTKB|F1RH75 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:CU856219
EMBL:CU928408 Ensembl:ENSSSCT00000015658 Uniprot:F1RH75
Length = 1766
Score = 237 (88.5 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD T + RL EE+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1651 PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1710
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1711 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1757
Score = 182 (69.1 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 545 FQKHWRKGQPIIVRNV-LEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSD-W 601
F++ W++GQP++V V ++ S+L W P + ++ L + + + + D W
Sbjct: 1411 FRECWKQGQPVLVSGVHKKLKSEL-WKPEAFSQEFGDQDVDLVNCRNCAIISDVKVRDFW 1469
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L R M LKLK W F++ P + +++ LPLPEY
Sbjct: 1470 DGFEIICKRL-----RSEDGQPMV---LKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1521
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1522 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYV- 1579
Query: 722 DVPV 725
+P+
Sbjct: 1580 GIPI 1583
Score = 75 (31.5 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 63/281 (22%), Positives = 103/281 (36%)
Query: 118 LKR-EVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSDNAGTSCAV 176
+KR +++R D + N D S+ SDS+ +L + GL I G +
Sbjct: 800 VKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQL--QAKTGLKGIPEHLMGKLGPN--- 854
Query: 177 KIGAEAAAVNRRRFRSKNIEPMPVGTLQVVPYKRDVVSLXXXXXXXXXXXXXXXGQSLIK 236
G +A + + + K P G + P K V G+ ++
Sbjct: 855 --GERSAELLLGKGKGKQA---PKGRPRTAPLK---VGQSVLKDVSKVKKLKQSGEPFLQ 906
Query: 237 CSSCRK----LFFCVDCVKEWY--FDTQE--DVKKACPVC---------RGTCGCKACSS 279
SC L C +C E Y F QE D AC +G + S
Sbjct: 907 DGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLS 966
Query: 280 SQYRDIDYKDLLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEV 339
Q D D +L ++ + + + +L + Q Q V E EA + + +V
Sbjct: 967 PQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQ--LVMSEKEAMMMVEPHQKV 1024
Query: 340 QIQEAEFKYNRLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
+ A + R C C+T++ + H C C + +CL C R
Sbjct: 1025 AWKRA-VRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYR 1064
Score = 38 (18.4 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 38 HLQGRHRQNREKVPESLKIQRKHKKIFKVQQRT 70
HL G+ N E+ E L + K K+ K + RT
Sbjct: 846 HLMGKLGPNGERSAELLLGKGKGKQAPKGRPRT 878
>MGI|MGI:1923356 [details] [associations]
symbol:Kdm3b "KDM3B lysine (K)-specific demethylase 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 MGI:MGI:1923356 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 OrthoDB:EOG4W9J32 EMBL:AK129281
EMBL:BC031981 EMBL:BC038376 EMBL:BC060727 EMBL:BC108415
EMBL:AK018027 EMBL:AK033343 IPI:IPI00664808 IPI:IPI00757477
UniGene:Mm.277906 ProteinModelPortal:Q6ZPY7 STRING:Q6ZPY7
PhosphoSite:Q6ZPY7 PaxDb:Q6ZPY7 PRIDE:Q6ZPY7 CleanEx:MM_JMJD1B
Genevestigator:Q6ZPY7 GermOnline:ENSMUSG00000038773 Uniprot:Q6ZPY7
Length = 1562
Score = 230 (86.0 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 43/107 (40%), Positives = 65/107 (60%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + RL EE+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1447 PIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1506
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1507 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1553
Score = 183 (69.5 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 55/184 (29%), Positives = 89/184 (48%)
Query: 545 FQKHWRKGQPIIVRNV-LEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSD-W 601
F++ W++GQP++V V ++ S+L W P + ++ L + + + + D W
Sbjct: 1206 FRECWKQGQPVLVSGVHKKLKSEL-WKPEAFSQEFGDQDVDLVNCRNCAIISDVKVRDFW 1264
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L R M LKLK W F++ P + +++ LPLPEY
Sbjct: 1265 DGFEIICKRL-----RSEDGQPMV---LKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1316
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1317 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYV- 1374
Query: 722 DVPV 725
+PV
Sbjct: 1375 GIPV 1378
Score = 76 (31.8 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 63/281 (22%), Positives = 104/281 (37%)
Query: 118 LKR-EVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSDNAGTSCAV 176
+KR +++R D + N D S+ SDS+ +L + +GL I G +
Sbjct: 595 VKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQL--QAKSGLKGIPEHLMGKLGPN--- 649
Query: 177 KIGAEAAAVNRRRFRSKNIEPMPVGTLQVVPYKRDVVSLXXXXXXXXXXXXXXXGQSLIK 236
G +A + + + K P G + P K V G+ ++
Sbjct: 650 --GERSAELLLGKGKGKQA---PKGRPRTAPLK---VGQSVLKDVSKVRKLKQSGEPFLQ 701
Query: 237 CSSCRK----LFFCVDCVKEWY--FDTQE--DVKKACPVC---------RGTCGCKACSS 279
SC L C +C E Y F QE D AC +G + S
Sbjct: 702 DGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGVLRVEGFLS 761
Query: 280 SQYRDIDYKDLLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEV 339
Q D D +L ++ + + + +L + Q Q V E EA + + +V
Sbjct: 762 PQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQ--LVMSEKEAMMMVEPHQKV 819
Query: 340 QIQEAEFKYNRLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
+ A + R C C+T++ + H C C + +CL C R
Sbjct: 820 AWKRA-VRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYR 859
Score = 38 (18.4 bits), Expect = 5.6e-27, Sum P(3) = 5.6e-27
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 38 HLQGRHRQNREKVPESLKIQRKHKKIFKVQQRT 70
HL G+ N E+ E L + K K+ K + RT
Sbjct: 641 HLMGKLGPNGERSAELLLGKGKGKQAPKGRPRT 673
>UNIPROTKB|F1NJZ2 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:AADN02028186
EMBL:AADN02028187 EMBL:AADN02028188 IPI:IPI00589441
Ensembl:ENSGALT00000012413 Uniprot:F1NJZ2
Length = 1755
Score = 234 (87.4 bits), Expect = 2.2e-30, Sum P(4) = 2.2e-30
Identities = 43/107 (40%), Positives = 66/107 (61%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD T + RL +E+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1640 PIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1699
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1700 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1746
Score = 183 (69.5 bits), Expect = 2.2e-30, Sum P(4) = 2.2e-30
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 545 FQKHWRKGQPIIVRNV-LEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSD-W 601
F++ W++GQP++V V ++ S+L W P + ++ L + + + + D W
Sbjct: 1399 FRECWKQGQPVLVSGVHKKLKSEL-WKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFW 1457
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L R M LKLK W F++ P + +++ LPLPEY
Sbjct: 1458 DGFEIISKRL-----RSEDGQPMV---LKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1509
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1510 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYV- 1567
Query: 722 DVPV 725
+P+
Sbjct: 1568 GIPI 1571
Score = 69 (29.3 bits), Expect = 2.2e-30, Sum P(4) = 2.2e-30
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C+T++ + H C C + +CL C R
Sbjct: 1022 REMCDVCETTLFNIHWVCRKCGFGVCLDCYR 1052
Score = 61 (26.5 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 815 ILGCGTNQNSKKSE---KRMHFKDHKNN---SNYF--IKERLAESCGAQWDVFRR 861
I GC T Q ++K K + F+ N SNYF I E L+E ++ D F++
Sbjct: 515 IFGCSTGQEAQKDSDLSKNLFFQCMTQNLPSSNYFTVISESLSEDASSR-DTFKQ 568
Score = 47 (21.6 bits), Expect = 2.2e-30, Sum P(4) = 2.2e-30
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 118 LKR-EVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRE-----LPNGLMAISSTNSD-NA 170
+KR +++R D + N D S+ SDS+ +L + +P+ LM N++ NA
Sbjct: 796 VKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEEQLQAKACMKGIPDHLMVKLGPNAERNA 855
Score = 37 (18.1 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 118 LKREVEKRKRQKNFDFEDEENCDNSNYSDS 147
LK + ++K FE ++ N SDS
Sbjct: 280 LKAAKSSKGKKKRESFEGKDGRRRKNVSDS 309
>UNIPROTKB|F1SVC8 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:CU467088 EMBL:CU928755
RefSeq:XP_003124983.3 Ensembl:ENSSSCT00000009003 GeneID:100517522
KEGG:ssc:100517522 Uniprot:F1SVC8
Length = 1323
Score = 225 (84.3 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1208 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1267
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1268 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1314
Score = 167 (63.8 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 52/181 (28%), Positives = 82/181 (45%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 968 FRECWKQGQPVMVSGVHHKLNTELWKP----------ESFRKEFGNQEVDLVNCRT-NEI 1016
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P + NEK LKLK W F++ P+ + +++ +PLP
Sbjct: 1017 ITGATVGDFWDGFEDVPNR--LKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 1074
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1075 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1133
Query: 719 H 719
+
Sbjct: 1134 Y 1134
Score = 65 (27.9 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C C + +C+ C R
Sbjct: 661 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYR 691
Score = 46 (21.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 739 GHTGQHQTDSVEVAPEQKMANG-MGGKSHSDCENKEVGLC 777
G G H + VE E +G + SH+D K++ +C
Sbjct: 25 GSEGGHDSWDVERVAEWPWLSGTIRAVSHTDVTKKDLKVC 64
Score = 45 (20.9 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 568 SWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEVEIGVKQLFL-GSLRGPKHADMCN 626
SW P+++ +L SL S DG E G W +VE + +L G++R H D+
Sbjct: 8 SW-PVLVGKRFL---SL-SAADGS---EGGHDSW-DVERVAEWPWLSGTIRAVSHTDVTK 58
Query: 627 EKLKL 631
+ LK+
Sbjct: 59 KDLKV 63
Score = 42 (19.8 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 713 VVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAP---EQKMANGMGGKSHSDC 769
V++ T PVS +R L+ TG+ + + ++ P + A+ + K+ SD
Sbjct: 867 VLHTFNSTILTPVSNNNSGFLRNLLNSSTGKTE-NGLKNTPKILDDIFASLVQNKTCSDL 925
Query: 770 ENKEVGL 776
+ GL
Sbjct: 926 SKRPQGL 932
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 724 PVSTKQLNNIRELMQGHTGQHQTDSVEVAP 753
P ST LN + +L G+ + + P
Sbjct: 817 PASTSPLNWLADLTSGNVNKENKEKQPTMP 846
>UNIPROTKB|E1BFC2 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:DAAA02031122
IPI:IPI00709258 RefSeq:NP_001179801.1 UniGene:Bt.52403 PRIDE:E1BFC2
Ensembl:ENSBTAT00000018069 GeneID:536073 KEGG:bta:536073
NextBio:20876880 Uniprot:E1BFC2
Length = 1320
Score = 225 (84.3 bits), Expect = 9.6e-28, Sum P(3) = 9.6e-28
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1205 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1264
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1265 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1311
Score = 166 (63.5 bits), Expect = 9.6e-28, Sum P(3) = 9.6e-28
Identities = 52/181 (28%), Positives = 82/181 (45%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 965 FRECWKQGQPVMVSGVHHKLNTELWKP----------ESFRREFGNQEVDLVNCRT-NEI 1013
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P + NEK LKLK W F++ P+ + +++ +PLP
Sbjct: 1014 ITGATVGDFWDGFEDVPNR--LKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 1071
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1072 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1130
Query: 719 H 719
+
Sbjct: 1131 Y 1131
Score = 65 (27.9 bits), Expect = 9.6e-28, Sum P(3) = 9.6e-28
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C C + +C+ C R
Sbjct: 658 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYR 688
Score = 43 (20.2 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 710 LCDVVNVLAHTTDVPVSTKQLNN----IRELMQGHTGQHQTDSVEVAP---EQKMANGMG 762
LC VL HT + + T NN +R L+ TG+ + + ++ P + A+ +
Sbjct: 858 LCKSSTVL-HTFNSTILTPVSNNSSGFLRNLLNSSTGKTE-NGLKNTPKILDDIFASLVQ 915
Query: 763 GKSHSDCENKEVGL 776
K+ SD + GL
Sbjct: 916 NKTCSDLSKRPQGL 929
Score = 42 (19.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 742 GQHQTDSVEVAPEQKMANG-MGGKSHSDCENKEVGLC 777
G H + VE E +G + SH+D K++ +C
Sbjct: 25 GGHDSWDVERVAEWPWLSGTIRAVSHTDVTKKDLKVC 61
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 568 SWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEVEIGVKQLFL-GSLRGPKHADMCN 626
SW P+++ +L SL S DGG D ++VE + +L G++R H D+
Sbjct: 8 SW-PVLVGKRFL---SL-SAGDGG-------HDSWDVERVAEWPWLSGTIRAVSHTDVTK 55
Query: 627 EKLKL 631
+ LK+
Sbjct: 56 KDLKV 60
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 724 PVSTKQLNNIRELMQGHTGQHQTDSVEVAP 753
P ST LN + +L G+ + + P
Sbjct: 814 PASTSPLNWLADLTSGNVNKENKEKQPAMP 843
>UNIPROTKB|E2QWU9 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:AAEX03010929
RefSeq:XP_532973.3 Ensembl:ENSCAFT00000012063 GeneID:475763
KEGG:cfa:475763 NextBio:20851540 Uniprot:E2QWU9
Length = 1322
Score = 225 (84.3 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1207 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1266
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1267 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1313
Score = 170 (64.9 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 54/182 (29%), Positives = 86/182 (47%)
Query: 545 FQKHWRKGQPIIVRNVL-EVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFE 603
F++ W++GQP++V V ++ +DL W P S + E V+ C E
Sbjct: 967 FRECWKQGQPVMVSGVHHKLNTDL-WKP----------ESFRKEFGNQEVDLVNCRT-NE 1014
Query: 604 VEIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPL 657
+ G V + G P + NEK LKLK W F++ P+ + +++ +PL
Sbjct: 1015 IITGATVGDFWDGFEDVPNR--LKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPL 1072
Query: 658 PEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVL 717
PEY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1073 PEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVM 1131
Query: 718 AH 719
+
Sbjct: 1132 VY 1133
Score = 65 (27.9 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C C + +C+ C R
Sbjct: 660 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYR 690
Score = 46 (21.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 739 GHTGQHQTDSVEVAPEQKMANG-MGGKSHSDCENKEVGLC 777
G G H + VE E +G + SH+D K++ +C
Sbjct: 25 GGDGGHDSWDVERVAEWPWVSGTIRAVSHTDVTKKDLKVC 64
Score = 45 (20.9 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 568 SWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEVEIGVKQLFLGSLRGPKHADMCNE 627
SW P+++ +L SL S DGG + G W + G++R H D+ +
Sbjct: 8 SW-PVLVGKRFL---SL-SAADGG---DGGHDSWDVERVAEWPWVSGTIRAVSHTDVTKK 59
Query: 628 KLKL 631
LK+
Sbjct: 60 DLKV 63
Score = 44 (20.5 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 713 VVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAP---EQKMANGMGGKSHSDC 769
V++ T PVS +R L+ TG+ + + ++ P + A+ + K+ SD
Sbjct: 866 VLHTFNSTILTPVSNNNSGFLRNLLNSSTGKTE-NGLKNTPKILDDIFASLVQNKTSSDL 924
Query: 770 ENKEVGL 776
+ GL
Sbjct: 925 SKRPQGL 931
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 724 PVSTKQLNNIRELMQGHTGQHQTDSVEVAP 753
P ST LN + +L G+ + + P
Sbjct: 816 PASTSPLNWLADLTSGNVNKENKEKQPTMP 845
Score = 38 (18.4 bits), Expect = 2.4e-27, Sum P(4) = 2.4e-27
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 13 CKRTDGKQWRCNRRVME 29
C DG+ WR RR +E
Sbjct: 64 CVEFDGESWR-KRRWIE 79
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 755 QKMANGMGGKSHSDCENKEVGLCDVLGEEITRHEAGDLNVR 795
+ + N GK+ + +N L D+ + + DL+ R
Sbjct: 887 RNLLNSSTGKTENGLKNTPKILDDIFASLVQNKTSSDLSKR 927
>MGI|MGI:98847 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005506 "iron ion binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007290 "spermatid
nucleus elongation" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=ISO] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0036123 "histone H3-K9
dimethylation" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046293 "formaldehyde biosynthetic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:98847 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0005506 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0001047 GO:GO:0009755
GO:GO:0033169 GO:GO:0000976 GO:GO:0051573 GO:GO:0007290
GeneTree:ENSGT00530000063039 eggNOG:NOG305537 CTD:55818 KO:K15601
OrthoDB:EOG4FFD0Z GO:GO:0046293 EMBL:AK129204 EMBL:BC026605
EMBL:BC031158 EMBL:BC031200 EMBL:BC059264 EMBL:AK144825
EMBL:AK166797 EMBL:DQ323991 IPI:IPI00460716 IPI:IPI00755968
RefSeq:NP_001033784.2 RefSeq:NP_766589.1 UniGene:Mm.260479
ProteinModelPortal:Q6PCM1 IntAct:Q6PCM1 STRING:Q6PCM1
PhosphoSite:Q6PCM1 PaxDb:Q6PCM1 PRIDE:Q6PCM1
Ensembl:ENSMUST00000065509 Ensembl:ENSMUST00000167220 GeneID:104263
KEGG:mmu:104263 UCSC:uc009cgy.2 InParanoid:Q6PCM1 OMA:RRLQFNK
NextBio:356834 Bgee:Q6PCM1 CleanEx:MM_JMJD1A Genevestigator:Q6PCM1
GermOnline:ENSMUSG00000053470 GO:GO:0036123 Uniprot:Q6PCM1
Length = 1323
Score = 224 (83.9 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1208 PIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1267
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1268 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1314
Score = 164 (62.8 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKP----------ESFRKEFGEQEVDLVNCRT-NEI 1014
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P EK LKLK W F++ P+ + +++ +PLP
Sbjct: 1015 ITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 1074
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1075 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1133
Query: 719 H 719
+
Sbjct: 1134 Y 1134
Score = 65 (27.9 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C C + +C+ C R
Sbjct: 659 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYR 689
Score = 45 (20.9 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 13 CKRTDGKQWRCNRRV----MEDKKLCELHHLQGRHRQNREKVPESL 54
C DG+ WR R + ++ K H+L R++ E VPE +
Sbjct: 64 CVEFDGESWRKRRWIDVYSLQRKAFLVEHNLVLAERKSPE-VPEQV 108
Score = 44 (20.5 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 568 SWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEVEIGVKQLFLGSLRGPKHADMCNE 627
SW P+++ +L S+ + N+GG +W + G++R H D+ +
Sbjct: 8 SW-PVLVGKRFLSLSAAEG-NEGGQ------DNWDLERVAEWPWLSGTIRAVSHTDVTKK 59
Query: 628 KLKL 631
LK+
Sbjct: 60 DLKV 63
Score = 41 (19.5 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 742 GQHQTDSVEVAPEQKMANGMGGKSHSDCENKEVGLC 777
GQ D VA ++ + SH+D K++ +C
Sbjct: 29 GQDNWDLERVAEWPWLSGTIRAVSHTDVTKKDLKVC 64
Score = 37 (18.1 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 724 PVSTKQLNNIRELMQGHTGQHQTDSVEVAP 753
P ST LN + +L G+ + + P
Sbjct: 815 PTSTSPLNWLADLTSGNVNKENKEKQLTMP 844
>RGD|708351 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005506 "iron ion
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0007290 "spermatid nucleus
elongation" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009755 "hormone-mediated signaling pathway"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030521 "androgen receptor signaling pathway"
evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0036123 "histone H3-K9 dimethylation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046293 "formaldehyde biosynthetic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 RGD:708351 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007283 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
eggNOG:NOG305537 CTD:55818 HOGENOM:HOG000007471 KO:K15601
EMBL:X59993 IPI:IPI00566177 PIR:S28499 RefSeq:NP_786940.1
UniGene:Rn.10541 ProteinModelPortal:Q63679 STRING:Q63679
PRIDE:Q63679 GeneID:312440 KEGG:rno:312440 UCSC:RGD:708351
NextBio:664882 ArrayExpress:Q63679 Genevestigator:Q63679
GermOnline:ENSRNOG00000007814 Uniprot:Q63679
Length = 1214
Score = 222 (83.2 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1092 PIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1151
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1152 SPEHVKHCFWLTQEFRHLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1198
Score = 163 (62.4 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKP----------ESFRKEFGEQEVDLVNCRT-NEI 898
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P EK LKLK W F++ P+ + +++ +PLP
Sbjct: 899 ITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 958
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 959 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1017
Query: 719 H 719
+
Sbjct: 1018 Y 1018
Score = 65 (27.9 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C C + +C+ C R
Sbjct: 543 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYR 573
Score = 44 (20.5 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 713 VVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAP---EQKMANGMGGKSHSDC 769
V++ T PVS +R L+ TG+ + + ++ P + A+ + K+ SD
Sbjct: 749 VLHTFNSTILTPVSNNNSGFLRNLLNSSTGKTE-NGLKNTPKILDDIFASLVQNKTSSDL 807
Query: 770 ENKEVGL 776
+ GL
Sbjct: 808 SKRPQGL 814
Score = 38 (18.4 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 597 GCSDWFEVEIGVKQLFLGSLRGPKHADMCNEKLKLK 632
G SD EVE GV +L S + +D+ ++ LK
Sbjct: 334 GLSDKPEVEAGVTRLNSCSEKKVGPSDLGSQSQNLK 369
Score = 37 (18.1 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 755 QKMANGMGGKSHSDCENKEVGLCDVLGEEITRHEAGDLNVR 795
+ + N GK+ + +N L D+ + + DL+ R
Sbjct: 770 RNLLNSSTGKTENGLKNTPKILDDIFASLVQNKTSSDLSKR 810
>UNIPROTKB|Q5ZIX8 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000433
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00291
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 EMBL:AJ720656 IPI:IPI00821166
RefSeq:NP_001012909.1 UniGene:Gga.17648 ProteinModelPortal:Q5ZIX8
GeneID:422917 KEGG:gga:422917 CTD:55818 HOGENOM:HOG000007471
KO:K15601 OrthoDB:EOG4FFD0Z NextBio:20825473 Uniprot:Q5ZIX8
Length = 1325
Score = 225 (84.3 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1210 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1269
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV +R
Sbjct: 1270 SPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAVGILR 1316
Score = 165 (63.1 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 51/178 (28%), Positives = 87/178 (48%)
Query: 545 FQKHWRKGQPIIVRNVL-EVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCS--DW 601
F++ W++GQP++V V ++ +DL W P F + N TG + D+
Sbjct: 969 FRECWKQGQPVMVSGVHHKLNADL-WRP-ESFRKEFGQQEVDLVNCRTNEIITGATVGDF 1026
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
++ G + + LR + M LKLK W F++ P+ + ++++ +PLPEY
Sbjct: 1027 WD---GFEDIS-SRLRTEEGEPMV---LKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYT 1079
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+ G LN+A++LP F DLGP +Y +Y + T L D+ D NV+ +
Sbjct: 1080 R-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1136
Score = 60 (26.2 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + C+ C + +C+ C R
Sbjct: 666 REMCDVCDTTIFNLRWVCSKCGFGVCVDCYR 696
Score = 40 (19.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 645 PAHYAEIIRGLPLPEYMDPKTG 666
PA+ + +GLPLP P G
Sbjct: 300 PANKDQRHQGLPLPANSPPNLG 321
>UNIPROTKB|Q9Y4C1 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001047 "core promoter binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007290 "spermatid nucleus elongation"
evidence=IEA] [GO:0036123 "histone H3-K9 dimethylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=IDA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IDA]
[GO:0033169 "histone H3-K9 demethylation" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IDA]
[GO:0050681 "androgen receptor binding" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH471053
GO:GO:0030154 GO:GO:0030521 GO:GO:0005506 GO:GO:0007283
GO:GO:0006351 GO:GO:0016702 GO:GO:0009755 GO:GO:0033169
Pathway_Interaction_DB:ar_pathway GO:GO:0050681 EMBL:AC068288
eggNOG:NOG305537 CTD:55818 KO:K15601 OrthoDB:EOG4FFD0Z
EMBL:AB018285 EMBL:AL832150 EMBL:BX640698 EMBL:CR749581
IPI:IPI00479545 RefSeq:NP_001140160.1 RefSeq:NP_060903.2
UniGene:Hs.557425 ProteinModelPortal:Q9Y4C1 IntAct:Q9Y4C1
STRING:Q9Y4C1 PhosphoSite:Q9Y4C1 DMDM:308153659 PaxDb:Q9Y4C1
PRIDE:Q9Y4C1 Ensembl:ENST00000312912 Ensembl:ENST00000409064
Ensembl:ENST00000409556 GeneID:55818 KEGG:hsa:55818 UCSC:uc002sri.4
GeneCards:GC02P086667 H-InvDB:HIX0002238 HGNC:HGNC:20815 MIM:611512
neXtProt:NX_Q9Y4C1 PharmGKB:PA164721293 InParanoid:Q9Y4C1
BindingDB:Q9Y4C1 ChEMBL:CHEMBL1938209 ChiTaRS:KDM3A
GenomeRNAi:55818 NextBio:61002 ArrayExpress:Q9Y4C1 Bgee:Q9Y4C1
CleanEx:HS_JMJD1A Genevestigator:Q9Y4C1 GermOnline:ENSG00000115548
GO:GO:0046293 Uniprot:Q9Y4C1
Length = 1321
Score = 225 (84.3 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1206 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1265
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1266 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1312
Score = 167 (63.8 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 54/182 (29%), Positives = 86/182 (47%)
Query: 545 FQKHWRKGQPIIVRNVL-EVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFE 603
F++ W++GQP++V V ++ S+L W P S + E V+ C E
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSEL-WKP----------ESFRKEFGEQEVDLVNCRT-NE 1013
Query: 604 VEIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPL 657
+ G V + G P + NEK LKLK W F++ P+ + +++ +PL
Sbjct: 1014 IITGATVGDFWDGFEDVPNR--LKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPL 1071
Query: 658 PEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVL 717
PEY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1072 PEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVM 1130
Query: 718 AH 719
+
Sbjct: 1131 VY 1132
Score = 65 (27.9 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C C + +C+ C R
Sbjct: 659 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYR 689
Score = 43 (20.2 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 713 VVNVLAHTTDVPVSTKQLNNIRELMQGHTGQHQTDSVEVAP---EQKMANGMGGKSHSDC 769
V++ T PVS +R L+ TG+ + + ++ P + A+ + K+ SD
Sbjct: 865 VLHTFNSTILTPVSNNNSGFLRNLLNSSTGKTE-NGLKNTPKILDDIFASLVQNKTTSDL 923
Query: 770 ENKEVGL 776
+ GL
Sbjct: 924 SKRPQGL 930
Score = 42 (19.8 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 568 SWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEVEIGVKQLFL-GSLRGPKHADMCN 626
SW P+++ +L SL S DG G D ++VE + +L G++R H D+
Sbjct: 8 SW-PVLVGRRFL---SL-SAADGS----DGSHDSWDVERVAEWPWLSGTIRAVSHTDVTK 58
Query: 627 EKLKL 631
+ LK+
Sbjct: 59 KDLKV 63
Score = 40 (19.1 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 729 QLNNIRELMQGHTGQHQTDS-VEVAPEQKMANGMGGKSHSDCENKEV 774
++ N EL Q H + S V APE K G+ S ++C K+V
Sbjct: 429 EIANPPEL-QKHLEHAPSPSDVSNAPEVKA--GVNSDSPNNCSGKKV 472
Score = 39 (18.8 bits), Expect = 4.5e-14, Sum P(4) = 4.5e-14
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 724 PVSTKQLNNIRELMQGHTGQHQTDSVEVAP 753
P ST LN + +L G+ + + P
Sbjct: 815 PASTSPLNWLADLTSGNVNKENKEKQPTMP 844
Score = 38 (18.4 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 13 CKRTDGKQWRCNRRVME 29
C DG+ WR RR +E
Sbjct: 64 CVEFDGESWR-KRRWIE 79
>UNIPROTKB|E1C232 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007290
"spermatid nucleus elongation" evidence=IEA] [GO:0009755
"hormone-mediated signaling pathway" evidence=IEA] [GO:0030521
"androgen receptor signaling pathway" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039
GO:GO:0046293 OMA:RRLQFNK EMBL:AADN02014773 IPI:IPI00586981
Ensembl:ENSGALT00000025482 ArrayExpress:E1C232 Uniprot:E1C232
Length = 1333
Score = 207 (77.9 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 43/113 (38%), Positives = 64/113 (56%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIR------NLKSCVN 920
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q R NL SC+
Sbjct: 1212 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQARTTGTVHNLYSCIK 1271
Query: 921 VVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
V DF+SPE+V C L E R L H +K +V + +A+ AV +R
Sbjct: 1272 VAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAVGILR 1324
Score = 165 (63.1 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 51/178 (28%), Positives = 87/178 (48%)
Query: 545 FQKHWRKGQPIIVRNVL-EVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCS--DW 601
F++ W++GQP++V V ++ +DL W P F + N TG + D+
Sbjct: 971 FRECWKQGQPVMVSGVHHKLNADL-WRP-ESFRKEFGQQEVDLVNCRTNEIITGATVGDF 1028
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
++ G + + LR + M LKLK W F++ P+ + ++++ +PLPEY
Sbjct: 1029 WD---GFEDIS-SRLRTEEGEPMV---LKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYT 1081
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+ G LN+A++LP F DLGP +Y +Y + T L D+ D NV+ +
Sbjct: 1082 R-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1138
Score = 68 (29.0 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C T+I + H C+ C + +C+ C R
Sbjct: 668 REMCDVCDTTIFNLHWVCSKCGFGVCVDCYR 698
Score = 40 (19.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 645 PAHYAEIIRGLPLPEYMDPKTG 666
PA+ + +GLPLP P G
Sbjct: 302 PANKDQRHQGLPLPANSPPNLG 323
>UNIPROTKB|Q15652 [details] [associations]
symbol:JMJD1C "Probable JmjC domain-containing histone
demethylation protein 2C" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0046966 "thyroid
hormone receptor binding" evidence=TAS] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005654 GO:GO:0006355
GO:GO:0046872 GO:GO:0007596 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0046966 EMBL:EF068222 EMBL:BX537954
EMBL:AL713895 EMBL:AL590502 EMBL:AL607128 EMBL:AC022022
EMBL:AK027280 EMBL:AL831917 EMBL:AB037801 EMBL:L40411
IPI:IPI00384202 IPI:IPI00902772 IPI:IPI01012411 RefSeq:NP_004232.2
RefSeq:NP_116165.1 UniGene:Hs.413416 PDB:2YPD PDBsum:2YPD
ProteinModelPortal:Q15652 IntAct:Q15652 STRING:Q15652
PhosphoSite:Q15652 DMDM:85541650 PaxDb:Q15652 PRIDE:Q15652
Ensembl:ENST00000399251 Ensembl:ENST00000399262
Ensembl:ENST00000542921 GeneID:221037 KEGG:hsa:221037
UCSC:uc001jml.3 CTD:221037 GeneCards:GC10M064926 HGNC:HGNC:12313
MIM:604503 neXtProt:NX_Q15652 PharmGKB:PA128394767 eggNOG:NOG305537
HOVERGEN:HBG079631 InParanoid:Q15652 KO:K11449 OMA:YKMKHSV
OrthoDB:EOG447FS9 ChiTaRS:JMJD1C GenomeRNAi:221037 NextBio:91161
ArrayExpress:Q15652 Bgee:Q15652 CleanEx:HS_JMJD1C
Genevestigator:Q15652 GermOnline:ENSG00000171988 Uniprot:Q15652
Length = 2540
Score = 187 (70.9 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 35/107 (32%), Positives = 65/107 (60%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++++ + RL EE+ + T Q +G+A+++PAG +Q++N SC+ V DF+
Sbjct: 2423 PIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFV 2482
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE++ E L E+RLL + +K +V + +A+ V+ ++
Sbjct: 2483 SPEHLVESFHLTQELRLLKEEINYD-DKLQVKNILYHAVKEMVRALK 2528
Score = 176 (67.0 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 52/178 (29%), Positives = 80/178 (44%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP +V V + + W K S+ + + C D
Sbjct: 2182 FKECWKQGQPAVVSGVHKKMNISLW----------KAESISLDFGDHQADLLNCKDSIIS 2231
Query: 605 EIGVKQLFLGSLRGPKHA-DMCNEK--LKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
VK+ + G K + E LKLK W S F+ PA Y ++++ LPLPEY
Sbjct: 2232 NANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYC 2291
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+P+ G N+A+ LP F DLGP + +Y T L ++ DVVN+L +
Sbjct: 2292 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVY 2348
Score = 66 (28.3 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSC 378
R C +C+ ++ + H C C + +CL C
Sbjct: 1843 REMCDACEATLFNIHWVCQKCGFVVCLDC 1871
Score = 41 (19.5 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 124 KRKRQKNF-DFEDEENCDNSNY----SDSDRELTRELPN 157
KR R N DF + + +NSN + S+++ EL N
Sbjct: 365 KRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENELKN 403
Score = 41 (19.5 bits), Expect = 5.3e-09, Sum P(5) = 5.3e-09
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 556 IVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEET 596
+++NVL ++ +S + M + +N+ KSE +GG+ E+
Sbjct: 1955 VLQNVLNHSNKIS---LCMPESQQQNTPPKSEKNGGSSPES 1992
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 3 EEEDLPDHLRCKRTDGKQ 20
EEEDL D LR + D +
Sbjct: 2368 EEEDLDDILRKRLKDSSE 2385
Score = 39 (18.8 bits), Expect = 8.5e-23, Sum P(4) = 8.5e-23
Identities = 9/47 (19%), Positives = 24/47 (51%)
Query: 108 DLQLELIRMVLKREVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRE 154
D ++ + + V +V +RK ++ ++ E + + S S++ R+
Sbjct: 1599 DSKIIVDKYVKDDKVNRRKAKRTYESGSESGDSDESESKSEQRTKRQ 1645
Score = 39 (18.8 bits), Expect = 5.3e-09, Sum P(5) = 5.3e-09
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 828 EKR-MHFKDHKNNSNY-FIKE 846
EK + KD+KN+SN+ KE
Sbjct: 2164 EKHILWLKDYKNSSNWKLFKE 2184
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(5) = 1.0e-08
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 762 GGKSHSDCENKE 773
G KSH C NK+
Sbjct: 1928 GIKSHCHCTNKQ 1939
Score = 37 (18.1 bits), Expect = 5.9e-06, Sum P(5) = 5.9e-06
Identities = 18/61 (29%), Positives = 24/61 (39%)
Query: 663 PKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTTD 722
P ++ TK +NF G SV S S +V +C DV+ A TT
Sbjct: 1357 PNVNSDSVHTKSEKNFQAVSQG-SVPSSVMS--------AVNTMCNTKTDVITSAADTTS 1407
Query: 723 V 723
V
Sbjct: 1408 V 1408
>MGI|MGI:1918614 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 MGI:MGI:1918614
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 GeneTree:ENSGT00530000063039 CTD:221037
eggNOG:NOG305537 HOVERGEN:HBG079631 KO:K11449 OrthoDB:EOG447FS9
ChiTaRS:JMJD1C EMBL:AK173162 EMBL:AC155712 EMBL:AC156272
EMBL:AK077400 EMBL:AK082106 EMBL:AK085500 EMBL:BC068318
IPI:IPI00749954 RefSeq:NP_001229325.1 UniGene:Mm.23846
IntAct:Q69ZK6 STRING:Q69ZK6 PhosphoSite:Q69ZK6 PRIDE:Q69ZK6
Ensembl:ENSMUST00000173689 GeneID:108829 KEGG:mmu:108829
UCSC:uc007fls.2 UCSC:uc011xfo.1 HOGENOM:HOG000113130
InParanoid:Q69ZK6 NextBio:361361 Bgee:Q69ZK6 CleanEx:MM_JMJD1C
Genevestigator:Q69ZK6 GermOnline:ENSMUSG00000037876 Uniprot:Q69ZK6
Length = 2350
Score = 184 (69.8 bits), Expect = 1.7e-20, Sum P(4) = 1.7e-20
Identities = 35/107 (32%), Positives = 65/107 (60%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++++ + RL EE+ + T Q +G+A+++PAG +Q++N SCV V DF+
Sbjct: 2233 PIRDQSWYVNRKLRQRLLEEYGVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFV 2292
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE++ + L E+RLL + +K +V + +A+ V+ ++
Sbjct: 2293 SPEHLVQSFHLTQELRLLKEEINYD-DKLQVKNILYHAVKEMVRALK 2338
Score = 158 (60.7 bits), Expect = 1.7e-20, Sum P(4) = 1.7e-20
Identities = 52/178 (29%), Positives = 76/178 (42%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP +V V + + W K S+ + + C D
Sbjct: 1992 FKECWKQGQPAVVSGVHKKMNISLW----------KAESISLDFGDHQADLLNCKDSIVS 2041
Query: 605 EIGVKQLFLGSLRGPKHA-DMCNEK--LKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
VK+ + G K + E LKLK S F+ P Y + +R LPLPEY
Sbjct: 2042 NANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYC 2101
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+P+ G N+A+ LP F DLGP + +Y T L + DVVNVL +
Sbjct: 2102 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVY 2158
Score = 64 (27.6 bits), Expect = 1.7e-20, Sum P(4) = 1.7e-20
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSC 378
R C +C+ ++ + H C C + CL C
Sbjct: 1654 REMCDACEATLFNVHWVCRKCGFVACLDC 1682
Score = 38 (18.4 bits), Expect = 1.7e-20, Sum P(4) = 1.7e-20
Identities = 9/49 (18%), Positives = 24/49 (48%)
Query: 106 RGDLQLELIRMVLKREVEKRKRQKNFDFEDEENCDNSNYSDSDRELTRE 154
R D ++ + + +V +RK ++ ++ E + + S S++ R+
Sbjct: 1408 RADGRVAVDKYGRDEKVSRRKAKRTYESGSESGDSDESESKSEQRTKRQ 1456
>MGI|MGI:96223 [details] [associations]
symbol:Hr "hairless" species:10090 "Mus musculus" [GO:0000118
"histone deacetylase complex" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IDA] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:96223 GO:GO:0003714 GO:GO:0045892
GO:GO:0051291 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0043433 GO:GO:0016604 GO:GO:0000118 CTD:55806
eggNOG:NOG243648 HOGENOM:HOG000293150 HOVERGEN:HBG000171
OrthoDB:EOG4DBTCW EMBL:Z32675 EMBL:BC049182 IPI:IPI00123616
PIR:I48378 RefSeq:NP_068677.2 UniGene:Mm.7598
ProteinModelPortal:Q61645 SMR:Q61645 STRING:Q61645
PhosphoSite:Q61645 PRIDE:Q61645 Ensembl:ENSMUST00000022691
Ensembl:ENSMUST00000161069 GeneID:15460 KEGG:mmu:15460
UCSC:uc007uoj.1 GeneTree:ENSGT00530000063039 InParanoid:Q61645
ChiTaRS:HR NextBio:288274 Bgee:Q61645 CleanEx:MM_HR
Genevestigator:Q61645 GermOnline:ENSMUSG00000022096 Uniprot:Q61645
Length = 1182
Score = 167 (63.8 bits), Expect = 3.4e-17, Sum P(4) = 3.4e-17
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 874 FLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTE 933
+LDA + RL+EE+ + WT Q GEAV++PAG P+Q++ L S ++V F+SPE
Sbjct: 1082 YLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSAL 1141
Query: 934 CIQLIDEIRLLPTDHK---AKANK--FEVTKMALYAINTA 968
QL + LP DH+ A+ ++ F+ K A+ A+ A
Sbjct: 1142 SAQLYHQGASLPPDHRMLYAQMDRAVFQAVKAAVGALQEA 1181
Score = 90 (36.7 bits), Expect = 3.4e-17, Sum P(4) = 3.4e-17
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 635 LSSRLFQEQFPAHYAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSG 694
L R ++ + + LPLPEY + G LN+A+ LP L P ++ +Y
Sbjct: 930 LLHRTLGDKDASRVQNLASSLPLPEYCAHQ-GKLNLASYLPLGLTLHPLEPQLWAAYGVN 988
Query: 695 EELAQADSVTKLCYDLCDVVNVLAH 719
+ LC ++ D++++L H
Sbjct: 989 SHRGHLGT-KNLCVEVSDLISILVH 1012
Score = 74 (31.1 bits), Expect = 3.4e-17, Sum P(4) = 3.4e-17
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 352 YCCS-CKTSIVDYHRSCASCSYTLCLSCCR 380
+CCS C + + H C+ CS+ LC++C R
Sbjct: 593 HCCSRCHHGLFNTHWRCSHCSHRLCVACGR 622
Score = 68 (29.0 bits), Expect = 3.4e-17, Sum P(4) = 3.4e-17
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLS-W 569
FQ+HWR+GQP++V + + T LS W
Sbjct: 855 FQEHWRQGQPVLVSGI-QKTLRLSLW 879
>UNIPROTKB|F1MBI2 [details] [associations]
symbol:HR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:DAAA02023404 IPI:IPI00687527
Ensembl:ENSBTAT00000015967 Uniprot:F1MBI2
Length = 1186
Score = 157 (60.3 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 874 FLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTE 933
+LDA + RL+EE+ + WT Q GEAV++PAG P+Q++ L S V+V F+SPE
Sbjct: 1086 YLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQCLVSTVSVTQHFLSPETSAL 1145
Query: 934 CIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIRE 974
QL + LPT H+ + + A+ AV ++E
Sbjct: 1146 SAQLCHQGPSLPTAHRLLYAQMDWA--VFQAVKVAVGTLQE 1184
Score = 96 (38.9 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 634 WLSSRLFQEQFPAHYAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSS 693
+L R ++ + + LPLPEY G LN+A+ LP L P ++ +Y
Sbjct: 933 FLLHRALGDEDTSRVENLAASLPLPEYC-AHHGKLNLASYLPPGPVLRPLEPQLWAAYGV 991
Query: 694 GEELAQADSVTKLCYDLCDVVNVLAHTTDVPVSTKQLNNIRELMQGHTGQ 743
+ LC ++ D+V+VL H + P+ T + ++ + G G+
Sbjct: 992 SPHRGHLGT-KNLCVEVTDLVSVLVHA-EAPLPTWRRTQ-KDFLSGLDGE 1038
Score = 70 (29.7 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 353 CCS-CKTSIVDYHRSCASCSYTLCLSCCR 380
CCS C + + H C CS+ LC++C R
Sbjct: 592 CCSHCHHGLFNTHWRCPRCSHRLCVACGR 620
Score = 68 (29.0 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSW 569
FQ+HWR+GQP++V + W
Sbjct: 859 FQEHWRQGQPVLVSGIQRTLQGHLW 883
Score = 41 (19.5 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 379 CRDILQGSLSGCVRA--RLCKCPNGRKVCTSGVRILEKKSLRTYKEGYG 425
C++ L+G+ S + CK P R S L+K L + E +G
Sbjct: 340 CQEDLEGATSEPSESSEEACKTPGPRACPPSHHTKLKKTWLTRHSEQFG 388
>UNIPROTKB|O43593 [details] [associations]
symbol:HR "Protein hairless" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0051291 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0043433 GO:GO:0016604
GO:GO:0000118 EMBL:AF039196 EMBL:AJ277249 EMBL:AJ277250
EMBL:AJ277251 EMBL:AJ277252 EMBL:AJ277253 EMBL:AJ400825
EMBL:AJ400826 EMBL:AJ400827 EMBL:AJ400828 EMBL:AJ400829
EMBL:AJ400830 EMBL:AJ400831 EMBL:AJ400832 EMBL:AJ400833
EMBL:AJ400834 EMBL:AJ400835 EMBL:AJ400836 EMBL:AJ400837
EMBL:AJ277165 EMBL:BC067128 IPI:IPI00216544 IPI:IPI00292057
RefSeq:NP_005135.2 RefSeq:NP_060881.2 UniGene:Hs.272367
ProteinModelPortal:O43593 SMR:O43593 IntAct:O43593 MINT:MINT-269712
STRING:O43593 PhosphoSite:O43593 PaxDb:O43593 PRIDE:O43593
Ensembl:ENST00000312841 Ensembl:ENST00000381418 GeneID:55806
KEGG:hsa:55806 UCSC:uc003xas.3 UCSC:uc003xat.3 CTD:55806
GeneCards:GC08M022028 HGNC:HGNC:5172 MIM:146550 MIM:203655
MIM:209500 MIM:602302 neXtProt:NX_O43593 Orphanet:701
Orphanet:86819 Orphanet:444 PharmGKB:PA29443 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 InParanoid:O43593
OMA:LERAPFW OrthoDB:EOG4DBTCW PhylomeDB:O43593 GenomeRNAi:55806
NextBio:60959 ArrayExpress:O43593 Bgee:O43593 CleanEx:HS_HR
Genevestigator:O43593 GermOnline:ENSG00000168453 Uniprot:O43593
Length = 1189
Score = 154 (59.3 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 874 FLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTE 933
+LDA + RL+EE+ + WT Q GEAV++PAG P+Q++ L S V+V F+SPE
Sbjct: 1089 YLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSAL 1148
Query: 934 CIQLIDEIRLLPTD-HKAKANK----FEVTKMALYAINTA 968
QL + LP D H A F+ K+A+ + A
Sbjct: 1149 SAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEA 1188
Score = 96 (38.9 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 635 LSSRLFQEQFPAHYAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSG 694
L R ++ + + LPLPEY G LN+A+ LP L P ++ +Y
Sbjct: 937 LLHRALGDEDTSRVENLAASLPLPEYC-ALHGKLNLASYLPPGLALRPLEPQLWAAYGVS 995
Query: 695 EELAQADSVTKLCYDLCDVVNVLAHTTDVPV 725
+ LC ++ D+V++L H D P+
Sbjct: 996 PHRGHLGT-KNLCVEVADLVSILVHA-DTPL 1024
Score = 72 (30.4 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 353 CCS-CKTSIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRAR 394
CCS C + + H C CS+ LC++C G ++G RAR
Sbjct: 599 CCSRCHHGLFNTHWRCPRCSHRLCVAC------GRVAGTGRAR 635
Score = 68 (29.0 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSW 569
FQ+HWR+GQP++V + W
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLW 886
>UNIPROTKB|F1RMB8 [details] [associations]
symbol:HR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:CT827951
Ensembl:ENSSSCT00000010539 ArrayExpress:F1RMB8 Uniprot:F1RMB8
Length = 1177
Score = 151 (58.2 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 874 FLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTE 933
+LDA + RL+EE+ + WT Q GEAV++PAG P+Q++ L S V++ F+SPE
Sbjct: 1077 YLDARLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSITQHFLSPETSAL 1136
Query: 934 CIQLIDEIRLLPTD 947
QL + LP D
Sbjct: 1137 STQLCHQGPSLPPD 1150
Score = 113 (44.8 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 46/184 (25%), Positives = 75/184 (40%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEE-TGCSDWFE 603
FQ+HWR+GQP++V + + W+ + +L GG V T
Sbjct: 850 FQEHWRQGQPVLVSGIQKTLQSHLWETEAL-------GAL-----GGQVHALTPLGPPQS 897
Query: 604 VEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYMDP 663
+G + G R P+ +E L L R ++ + + LPLPEY
Sbjct: 898 TSLGSTAFWEGFSR-PETRPKSDEGSVL---LLHRALGDEDASRVENLAASLPLPEYC-A 952
Query: 664 KTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTTDV 723
G LN+A+ LP L P ++ +Y + LC ++ D+V+VL +
Sbjct: 953 HHGKLNLASYLPPGPGLRPLVPQLWAAYGVSPHCGHLGT-KNLCVEVTDLVSVLVRA-EA 1010
Query: 724 PVST 727
P+ T
Sbjct: 1011 PLPT 1014
Score = 72 (30.4 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 351 LYCCS-CKTSIVDYHRSCASCSYTLCLSCCR 380
L CCS C + + H C CS+ LC++C R
Sbjct: 593 LRCCSRCHHGLFNTHWRCPRCSHRLCVACGR 623
>RGD|620634 [details] [associations]
symbol:Hr "hair growth associated" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA;ISO] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IPI]
[GO:0051291 "protein heterooligomerization" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:620634 GO:GO:0003714 GO:GO:0045892 GO:GO:0051291 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 GO:GO:0043433 GO:GO:0042826
GO:GO:0016604 GO:GO:0000118 CTD:55806 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 OrthoDB:EOG4DBTCW
EMBL:U71293 IPI:IPI00230844 RefSeq:NP_077340.2 UniGene:Rn.41543
ProteinModelPortal:P97609 STRING:P97609 PRIDE:P97609 GeneID:60563
KEGG:rno:60563 UCSC:RGD:620634 InParanoid:P97609 NextBio:612242
Genevestigator:P97609 GermOnline:ENSRNOG00000011427 Uniprot:P97609
Length = 1181
Score = 163 (62.4 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 35/101 (34%), Positives = 57/101 (56%)
Query: 874 FLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTE 933
+LD+ + RL+EE+ + WT Q GEAV++PAG P+Q++ L S ++V F+SPE
Sbjct: 1081 YLDSGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSAL 1140
Query: 934 CIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIRE 974
QL + LP DH+ + + + A+ AV ++E
Sbjct: 1141 SAQLCHQGASLPPDHRMLYAQMD--RAVFQAVKVAVGTLQE 1179
Score = 89 (36.4 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 655 LPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVV 714
LPLPEY + G LN+A+ LP L P ++ +Y + LC ++ D++
Sbjct: 949 LPLPEYCAHQ-GKLNLASYLPLGLTLHPLEPQLWAAYGVNSHRGHLGT-KNLCVEVSDLI 1006
Query: 715 NVLAH 719
++L H
Sbjct: 1007 SILVH 1011
Score = 79 (32.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 39/149 (26%), Positives = 62/149 (41%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLS-WDPIVMFCTYLKNSSLKSENDGGAVEE-TGCSDWF 602
FQ+HWR+GQP++V + + T LS W + +L GG V+ T
Sbjct: 854 FQEHWRQGQPVLVSGI-QKTLRLSLWGMEAL-------GTL-----GGQVQTLTALGPPQ 900
Query: 603 EVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYMD 662
+ + G P+ +E L L R ++ + + LPLPEY
Sbjct: 901 PTSLDSTAFWKG-FSHPEARPKLDEGSVL---LLHRPLGDKDESRVENLASSLPLPEYCA 956
Query: 663 PKTGVLNIATKLPQNFPTSDLGPSVYISY 691
+ G LN+A+ LP L P ++ +Y
Sbjct: 957 HQ-GKLNLASYLPLGLTLHPLEPQLWAAY 984
Score = 74 (31.1 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 352 YCCS-CKTSIVDYHRSCASCSYTLCLSCCR 380
+CCS C + + H C+ CS+ LC++C R
Sbjct: 592 HCCSRCHHGLFNTHWRCSHCSHRLCVACGR 621
>UNIPROTKB|F1PFJ6 [details] [associations]
symbol:HR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0003714 GO:GO:0045892
GO:GO:0016604 CTD:55806 OMA:LERAPFW GeneTree:ENSGT00530000063039
EMBL:AAEX03014381 RefSeq:XP_543256.3 Ensembl:ENSCAFT00000015345
GeneID:486130 KEGG:cfa:486130 NextBio:20859967 Uniprot:F1PFJ6
Length = 1184
Score = 142 (55.0 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 874 FLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTE 933
+LDA + RL+EE+ + WT Q GEAV++PAG P+Q++ L + V+V F+SPE
Sbjct: 1084 YLDAGLRRRLREEWGVNCWTLLQAPGEAVLVPAGAPHQVQGLVNTVSVTQHFLSPETSAL 1143
Query: 934 CIQLIDEIRLLPTDHK 949
QL + L D +
Sbjct: 1144 SAQLCHQGPSLSPDRR 1159
Score = 82 (33.9 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 635 LSSRLFQEQFPAHYAEIIRGLPLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSG 694
L R ++ + + LPLPEY + G LN+A+ LP L P ++ +Y
Sbjct: 932 LLHRALGDEDTSRMENLAASLPLPEYCALR-GKLNLASYLPPGPALRPLEPQLWAAYGVS 990
Query: 695 EELAQADSVTKLCYDLCDVVNVLAHTTDVPV 725
+ LC ++ D+V+VL + P+
Sbjct: 991 PHRGHLGT-KNLCVEVTDLVSVLVRA-EAPL 1019
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 329 AKIKGQNPSEVQIQEAEFKYNRLYCCS-CKTSIVDYHRSCASCSYTLCLSCCR 380
A+ +GQ P+ + + CCS C + + H C CS+ LC++C R
Sbjct: 577 AQREGQGPARTEDNPGVLR-----CCSRCHRGLFNTHWKCPHCSHRLCVACGR 624
Score = 69 (29.3 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSW 569
FQ+HWR+GQP++V + W
Sbjct: 857 FQEHWRQGQPVLVSGIQRTLQGSLW 881
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(5) = 1.1e-13
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 148 DRELTRELPNGLMAISSTNSDNAGTSCAVK 177
D E P+ L SS + AG S A K
Sbjct: 400 DEESPSAQPHALKRASSPEAQEAGGSPAAK 429
Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 580 KNSSLKSENDGGAVEETGCS 599
++S+ SE GG+ E G S
Sbjct: 529 EDSAASSEEGGGSGPEAGLS 548
>RGD|708458 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 RGD:708458 eggNOG:NOG305537
OrthoDB:EOG447FS9 HOGENOM:HOG000113130 EMBL:AF202265
IPI:IPI01016516 UniGene:Rn.99017 ProteinModelPortal:Q9QXL6
STRING:Q9QXL6 UCSC:RGD:708458 Genevestigator:Q9QXL6 Uniprot:Q9QXL6
Length = 122
Score = 176 (67.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 32/107 (29%), Positives = 63/107 (58%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
P+ DQ ++++ + L EE+ + T Q +G+A+++PAG +Q++N SC+ V DF+
Sbjct: 5 PVRDQGWYVNRRPRQGLLEEYGVRACTLVQFLGDAIVLPAGTLHQVQNFHSCIQVTEDFV 64
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE++ + L E+RLL + +K +V + +A+ V+ ++
Sbjct: 65 SPEHLVQSFHLTQELRLLKEEINYD-DKLQVKNILYHAVKEMVRALK 110
>TAIR|locus:2059206 [details] [associations]
symbol:GRF1 "growth-regulating factor 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0048366 "leaf development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009624 "response to nematode" evidence=IEP] [GO:0048364 "root
development" evidence=IMP] [GO:0061062 "regulation of nematode
larval development" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=RCA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 EMBL:AC004786
EMBL:CP002685 GO:GO:0006355 GO:GO:0006351 GO:GO:0009624
GO:GO:0048364 GO:GO:0016818 EMBL:AY102634 EMBL:AB493560
IPI:IPI00518442 PIR:E84617 RefSeq:NP_179869.1 UniGene:At.28144
IntAct:O81001 STRING:O81001 PRIDE:O81001 EnsemblPlants:AT2G22840.1
GeneID:816815 KEGG:ath:AT2G22840 TAIR:At2g22840
HOGENOM:HOG000243855 InParanoid:O81001 OMA:ISAPMAS PhylomeDB:O81001
ProtClustDB:CLSN2683866 Genevestigator:O81001 GO:GO:0061062
Uniprot:O81001
Length = 530
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC+R + D+K CE H +GRHR +
Sbjct: 197 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRK 236
>UNIPROTKB|A2XA73 [details] [associations]
symbol:GRF1 "Growth-regulating factor 1" species:39946
"Oryza sativa Indica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0030912 "response to deep water" evidence=IEP]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 GO:GO:0030912 GO:GO:0009739 GO:GO:0016818
EMBL:AF201895 EMBL:CM000127 KEGG:dosa:Os02t0776900-02
KEGG:dosa:Os03t0441700-00 KEGG:dosa:Os04t0125800-00
KEGG:dosa:Os04t0136016-00 Gramene:A2XA73 eggNOG:NOG271934
Uniprot:A2XA73
Length = 396
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 2 QEEEDLPDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESL 54
++ ED P+ RC+RTDGK+WRC++ D K CE H +G++R +R+ V SL
Sbjct: 86 RKAED-PEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNR-SRKPVEMSL 136
>TAIR|locus:2137549 [details] [associations]
symbol:GRF2 "growth-regulating factor 2" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=IGI] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
EMBL:AL035709 EMBL:AL161592 GO:GO:0006355 GO:GO:0006351
GO:GO:0016818 HOGENOM:HOG000243855 ProtClustDB:CLSN2683866
EMBL:AY102635 EMBL:AK176372 EMBL:AK176432 EMBL:AB493726
IPI:IPI00542041 PIR:T06021 RefSeq:NP_195488.2 UniGene:At.2873
IntAct:Q8L8A8 STRING:Q8L8A8 PaxDb:Q8L8A8 PRIDE:Q8L8A8
EnsemblPlants:AT4G37740.1 GeneID:829930 KEGG:ath:AT4G37740
TAIR:At4g37740 eggNOG:NOG283878 InParanoid:Q8L8A8 OMA:KSTFCSL
PhylomeDB:Q8L8A8 Genevestigator:Q8L8A8 Uniprot:Q8L8A8
Length = 535
Score = 128 (50.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC+R + D+K CE H +GRHR +
Sbjct: 228 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRK 267
Score = 42 (19.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 130 NFDFEDEENCDNSNYSDSDRELTRELPNGLMAISSTNSDNAGT 172
+F E++ N N++ ELT + M+I +S + T
Sbjct: 384 DFSSNQEKHSGNHNHNSWPEELTSDWTQLSMSIPIASSSPSST 426
>TAIR|locus:2051597 [details] [associations]
symbol:GRF6 "growth-regulating factor 6" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=TAS] InterPro:IPR014977 InterPro:IPR014978
Pfam:PF08879 Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0006351
GO:GO:0048366 GO:GO:0016818 EMBL:AC006413 EMBL:AY060586
EMBL:AY125572 IPI:IPI00533650 PIR:A84476 RefSeq:NP_027759.1
UniGene:At.27363 EnsemblPlants:AT2G06200.1 GeneID:815176
KEGG:ath:AT2G06200 TAIR:At2g06200 eggNOG:NOG298059
HOGENOM:HOG000154035 InParanoid:Q9ZQ12 OMA:QWEELEN PhylomeDB:Q9ZQ12
ProtClustDB:CLSN2917074 Genevestigator:Q9ZQ12 Uniprot:Q9ZQ12
Length = 244
Score = 120 (47.3 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVP 51
RC+RTDGK+WRC++ D K CE H +G++R + K P
Sbjct: 85 RCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKPP 124
Score = 37 (18.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 275 KACSSSQYRDIDYKDLLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQ 334
K+CS S D D NNE +K H C +L + +++ + LE + K +
Sbjct: 159 KSCSGSAMEDNDDGSCRGINNE-EKQPDRH---CFILGTDLR-TRERPLMLEEKLKQRDH 213
Query: 335 NPSEVQIQEAEFKY 348
+ E Q + +++
Sbjct: 214 DNEEEQGSKRFYRF 227
>TAIR|locus:2088272 [details] [associations]
symbol:GRF5 "growth-regulating factor 5" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=IMP;TAS] [GO:0009737 "response to abscisic
acid stimulus" evidence=RCA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0016570
"histone modification" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] InterPro:IPR014977 InterPro:IPR014978
Pfam:PF08879 Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GO:GO:0006355 GO:GO:0006351 GO:GO:0048366
EMBL:AB019229 GO:GO:0016818 eggNOG:NOG271934 EMBL:AY102638
EMBL:AB493612 IPI:IPI00533172 RefSeq:NP_188012.2 UniGene:At.43414
IntAct:Q8L8A6 STRING:Q8L8A6 EnsemblPlants:AT3G13960.1 GeneID:820609
KEGG:ath:AT3G13960 TAIR:At3g13960 HOGENOM:HOG000239546
InParanoid:Q8L8A6 OMA:QMGFGRK PhylomeDB:Q8L8A6
ProtClustDB:CLSN2918095 Genevestigator:Q8L8A6 Uniprot:Q8L8A6
Length = 397
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC+R D K CE H +GR+R +
Sbjct: 82 PEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARK 121
>TAIR|locus:2134986 [details] [associations]
symbol:GRF8 "growth-regulating factor 8" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0048366 "leaf development"
evidence=TAS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879
Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002687 GO:GO:0006355 GO:GO:0009941 GO:GO:0006351
GO:GO:0048366 EMBL:AC002343 GO:GO:0016818 EMBL:AL109619
IPI:IPI00532271 PIR:T13463 RefSeq:NP_194146.1 UniGene:At.51240
UniGene:At.69386 PRIDE:Q9SU44 EnsemblPlants:AT4G24150.1
GeneID:828515 KEGG:ath:AT4G24150 TAIR:At4g24150
HOGENOM:HOG000153539 InParanoid:Q9SU44 OMA:KHVESSH PhylomeDB:Q9SU44
ProtClustDB:CLSN2915827 ArrayExpress:Q9SU44 Genevestigator:Q9SU44
Uniprot:Q9SU44
Length = 493
Score = 121 (47.7 bits), Expect = 0.00084, P = 0.00084
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPES 53
RCKRTDGK+WRC+R V+ D+K CE H + R R +R+ V S
Sbjct: 248 RCKRTDGKKWRCSRNVIPDQKYCERHTHKSRPR-SRKHVESS 288
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 979 934 0.00092 122 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 627 (67 KB)
Total size of DFA: 503 KB (2231 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 87.04u 0.07s 87.11t Elapsed: 00:00:03
Total cpu time: 87.05u 0.07s 87.12t Elapsed: 00:00:03
Start: Sat May 11 04:04:22 2013 End: Sat May 11 04:04:25 2013