BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038377
(979 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2
Length = 1761
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 66/107 (61%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD T + RL EE+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1646 PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1705
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1706 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1752
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSEN--DGGAVEETGCSD-W 601
F++ W++GQP++V V + W P F + + N + + + D W
Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSELWKPEA-FSQEFGDQDVDLVNCRNCAIISDVKVRDFW 1463
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L + D LKLK W F++ P + +++ LPLPEY
Sbjct: 1464 DGFEIICKRL--------RSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1515
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1516 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY-V 1573
Query: 722 DVPV 725
+P+
Sbjct: 1574 GIPI 1577
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 103/271 (38%), Gaps = 43/271 (15%)
Query: 132 DFEDEENCDNSNYSDSDRELT-----RELPNGLMAISSTNSDNAGTSCAVKIGAEAAAVN 186
D + N D S+ SDS+ +L + +P LM N + + K + A
Sbjct: 809 DSDSSTNSDLSDLSDSEEQLQAKTGLKGIPEHLMGKLGPNGERSAELLLGKSKGKQAPKG 868
Query: 187 RRRFRSKNIEPMPVGTLQVVPYKRDVVSLRRRRRRKRCHWCRRRGQSLIKCSSC----RK 242
R R P+ VG + +DV +++ ++ G+ ++ SC
Sbjct: 869 RPR-----TAPLKVGQSVL----KDVSKVKK---------LKQSGEPFLQDGSCINVAPH 910
Query: 243 LFFCVDCVKEWY--FDTQE--DVKKACPVC---------RGTCGCKACSSSQYRDIDYKD 289
L C +C E Y F QE D AC +G + S Q D D +
Sbjct: 911 LHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLSPQQSDPDAMN 970
Query: 290 LLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYN 349
L ++ + + + +L + Q Q V E EA + + +V + A +
Sbjct: 971 LWIPSSSLAEGIDLETSKYILANVGDQFCQ--LVMSEKEAMMMVEPHQKVAWKRA-VRGV 1027
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C+T++ + H C C + +CL C R
Sbjct: 1028 REMCDVCETTLFNIHWVCRKCGFGVCLDCYR 1058
>sp|Q6ZPY7|KDM3B_MOUSE Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2
Length = 1562
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + RL EE+ ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1447 PIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1506
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C +L E R L H +K +V + +A+ AV ++
Sbjct: 1507 SPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1553
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSEN--DGGAVEETGCSD-W 601
F++ W++GQP++V V + W P F + + N + + + D W
Sbjct: 1206 FRECWKQGQPVLVSGVHKKLKSELWKPEA-FSQEFGDQDVDLVNCRNCAIISDVKVRDFW 1264
Query: 602 FEVEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
EI K+L + D LKLK W F++ P + +++ LPLPEY
Sbjct: 1265 DGFEIICKRL--------RSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT 1316
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTT 721
+ G LN+A++LP F DLGP +Y +Y + T L D+ D VNV+ +
Sbjct: 1317 K-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY-V 1374
Query: 722 DVPV 725
+PV
Sbjct: 1375 GIPV 1378
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 43/271 (15%)
Query: 132 DFEDEENCDNSNYSDSDRELT-----RELPNGLMAISSTNSDNAGTSCAVKIGAEAAAVN 186
D + N D S+ SDS+ +L + +P LM N + + K + A
Sbjct: 610 DSDSSTNSDLSDLSDSEEQLQAKSGLKGIPEHLMGKLGPNGERSAELLLGKGKGKQAPKG 669
Query: 187 RRRFRSKNIEPMPVGTLQVVPYKRDVVSLRRRRRRKRCHWCRRRGQSLIKCSSC----RK 242
R R P+ VG + +DV +R+ ++ G+ ++ SC
Sbjct: 670 RPR-----TAPLKVGQSVL----KDVSKVRK---------LKQSGEPFLQDGSCINVAPH 711
Query: 243 LFFCVDCVKEWY--FDTQE--DVKKACPVC---------RGTCGCKACSSSQYRDIDYKD 289
L C +C E Y F QE D AC +G + S Q D D +
Sbjct: 712 LHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGVLRVEGFLSPQQSDPDAMN 771
Query: 290 LLKANNEVDKVLHFHYLICMLLPIVRQINQDQNVELEIEAKIKGQNPSEVQIQEAEFKYN 349
L ++ + + + +L + Q Q V E EA + + +V + A +
Sbjct: 772 LWIPSSSLAEGIDLETSKYILANVGDQFCQ--LVMSEKEAMMMVEPHQKVAWKRA-VRGV 828
Query: 350 RLYCCSCKTSIVDYHRSCASCSYTLCLSCCR 380
R C C+T++ + H C C + +CL C R
Sbjct: 829 REMCDVCETTLFNIHWVCRKCGFGVCLDCYR 859
>sp|Q5ZIX8|KDM3A_CHICK Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1
Length = 1325
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 24/189 (12%)
Query: 809 SDPDSLILGCGTNQNSKKSEKRMHFKDHKNNSNYFIKERLAES---CGAQWDVFRRED-- 863
SD ++++ G + E+ + +S+ +R ES GA W ++ +D
Sbjct: 1128 SDAANVMVYVGIPKGQADQEEEVLKTIQDGDSDELTIKRFTESREKPGALWHIYAAKDTE 1187
Query: 864 ------------------VVH-PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVII 904
V H PI DQ+++LD + + RL +E+ ++ W Q +G+ V I
Sbjct: 1188 KIREFLKKVAEEQGQENPVDHDPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFI 1247
Query: 905 PAGCPYQIRNLKSCVNVVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYA 964
PAG P+Q+ NL SC+ V DF+SPE+V C L E R L H +K +V + +A
Sbjct: 1248 PAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHA 1307
Query: 965 INTAVKEIR 973
+ AV +R
Sbjct: 1308 VKDAVGILR 1316
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 545 FQKHWRKGQPIIVRNVL-EVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFE 603
F++ W++GQP++V V ++ +DL W P S + E V+ C E
Sbjct: 969 FRECWKQGQPVMVSGVHHKLNADL-WRP----------ESFRKEFGQQEVDLVNCRT-NE 1016
Query: 604 VEIG--VKQLFLG------SLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGL 655
+ G V + G LR + M LKLK W F++ P+ + ++++ +
Sbjct: 1017 IITGATVGDFWDGFEDISSRLRTEEGEPMV---LKLKDWPPGEDFRDMMPSRFDDLMKNI 1073
Query: 656 PLPEYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVN 715
PLPEY + G LN+A++LP F DLGP +Y +Y + T L D+ D N
Sbjct: 1074 PLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAAN 1132
Query: 716 VLAHT 720
V+ +
Sbjct: 1133 VMVYV 1137
>sp|Q9Y4C1|KDM3A_HUMAN Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4
Length = 1321
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1206 PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1265
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1266 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1312
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSELWKP----------ESFRKEFGEQEVDLVNCRT-NEI 1014
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P + NEK LKLK W F++ P+ + +++ +PLP
Sbjct: 1015 ITGATVGDFWDGFEDVPNR--LKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 1072
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1073 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1131
Query: 719 HT 720
+
Sbjct: 1132 YV 1133
>sp|Q6PCM1|KDM3A_MOUSE Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1
Length = 1323
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1208 PIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1267
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ AV ++
Sbjct: 1268 SPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLK 1314
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKP----------ESFRKEFGEQEVDLVNCRT-NEI 1014
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P EK LKLK W F++ P+ + +++ +PLP
Sbjct: 1015 ITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 1074
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 1075 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1133
Query: 719 H 719
+
Sbjct: 1134 Y 1134
>sp|Q63679|KDM3A_RAT Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2
SV=1
Length = 1214
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + + RL +E+ ++ W Q +G+ V IPAG P+Q+ NL SC+ V DF+
Sbjct: 1092 PIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFV 1151
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIREL 975
SPE+V C L E R L H +K +V + +A+ AV ++ +
Sbjct: 1152 SPEHVKHCFWLTQEFRHLSQTHTNHEDKLQVKNVIYHAVKDAVAMLKAV 1200
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP++V V + W P S + E V+ C E+
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKP----------ESFRKEFGEQEVDLVNCRT-NEI 898
Query: 605 EIG--VKQLFLGSLRGPKHADMCNEK----LKLKGWLSSRLFQEQFPAHYAEIIRGLPLP 658
G V + G P EK LKLK W F++ P+ + +++ +PLP
Sbjct: 899 ITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 958
Query: 659 EYMDPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLA 718
EY + G LN+A++LP F DLGP +Y +Y + T L D+ D NV+
Sbjct: 959 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1017
Query: 719 H 719
+
Sbjct: 1018 Y 1018
>sp|Q6IRB8|KD3AA_XENLA Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2
SV=1
Length = 1331
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD T + RL +E ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1216 PIHDQSWYLDNTLRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1275
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ ++ ++
Sbjct: 1276 SPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAILK 1322
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSDWFE 603
F++ W++GQP+IV + + W P + + + L + + D++E
Sbjct: 975 FRECWKQGQPVIVSGIHNNLNSELWRPESFRREFGDQEADLVNCRTNDIITGATVGDFWE 1034
Query: 604 VEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYMDP 663
G + + L+ K M LKLK W F++ + + +++ +PLPEY
Sbjct: 1035 ---GFEDI-SARLKNDKGEAMV---LKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR- 1086
Query: 664 KTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+ G LN+A +LP F DLGP +Y +Y + T L D+ D NV+ +
Sbjct: 1087 REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVY 1142
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2
SV=1
Length = 1334
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%)
Query: 867 PILDQNFFLDATHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFI 926
PI DQ+++LD + RL +E ++ W Q +G+AV IPAG P+Q+ NL SC+ V DF+
Sbjct: 1219 PIHDQSWYLDNILRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFV 1278
Query: 927 SPENVTECIQLIDEIRLLPTDHKAKANKFEVTKMALYAINTAVKEIR 973
SPE+V C L E R L H +K +V + +A+ ++ ++
Sbjct: 1279 SPEHVKHCFCLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAILK 1325
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYL-KNSSLKSENDGGAVEETGCSDWFE 603
F++ W++GQP++V V + W P + + + L + + D+++
Sbjct: 978 FRECWKQGQPVMVSGVHNNLNSELWRPESFRREFGDQEADLVNCRTNDIITGATVGDFWD 1037
Query: 604 VEIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYMDP 663
G + + G L+ M LKLK W F++ + + +++ +PLPEY
Sbjct: 1038 ---GFEDI-PGRLKNDTGESMV---LKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR- 1089
Query: 664 KTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+ G LN+A +LP F DLGP +Y +Y + T L D+ D NV+ +
Sbjct: 1090 REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1145
>sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C
OS=Homo sapiens GN=JMJD1C PE=1 SV=2
Length = 2540
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 31/158 (19%)
Query: 843 FIKERLAESC---GAQWDVFRREDV---------------------VHPILDQNFFLDAT 878
+++RL +S GA W ++ +DV PI DQ+++++
Sbjct: 2375 ILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKK 2434
Query: 879 HKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTECIQLI 938
+ RL EE+ + T Q +G+A+++PAG +Q++N SC+ V DF+SPE++ E L
Sbjct: 2435 LRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLT 2494
Query: 939 DEIRLLPTDHKAKAN---KFEVTKMALYAINTAVKEIR 973
E+RLL K + N K +V + +A+ V+ ++
Sbjct: 2495 QELRLL----KEEINYDDKLQVKNILYHAVKEMVRALK 2528
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP +V V + M + K S+ + + C D
Sbjct: 2182 FKECWKQGQPAVVSGVHKK----------MNISLWKAESISLDFGDHQADLLNCKDSIIS 2231
Query: 605 EIGVKQLFLG---SLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
VK+ + G + K+ LKLK W S F+ PA Y ++++ LPLPEY
Sbjct: 2232 NANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYC 2291
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+P+ G N+A+ LP F DLGP + +Y T L ++ DVVN+L +
Sbjct: 2292 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVY 2348
>sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus GN=Hr PE=2 SV=2
Length = 1182
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 856 WDVFRREDV-----------------VHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHV 898
W VFR +D + P + +LDA + RL+EE+ + WT Q
Sbjct: 1047 WHVFRAQDAQRIRRFLQMVCPAGAGTLEPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAP 1106
Query: 899 GEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVT 958
GEAV++PAG P+Q++ L S ++V F+SPE QL + LP DH+ + +
Sbjct: 1107 GEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDHRMLYAQMD-- 1164
Query: 959 KMALYAINTAVKEIRE 974
+ A+ AV ++E
Sbjct: 1165 RAVFQAVKAAVGALQE 1180
>sp|Q69ZK6|JHD2C_MOUSE Probable JmjC domain-containing histone demethylation protein 2C
OS=Mus musculus GN=Jmjd1c PE=1 SV=3
Length = 2350
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 31/158 (19%)
Query: 843 FIKERLAESC---GAQWDVFRREDVVH---------------------PILDQNFFLDAT 878
+++RL +S GA W ++ +DV PI DQ+++++
Sbjct: 2185 VLRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNRK 2244
Query: 879 HKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTECIQLI 938
+ RL EE+ + T Q +G+A+++PAG +Q++N SCV V DF+SPE++ + L
Sbjct: 2245 LRQRLLEEYGVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLT 2304
Query: 939 DEIRLLPTDHKAKAN---KFEVTKMALYAINTAVKEIR 973
E+RLL K + N K +V + +A+ V+ ++
Sbjct: 2305 QELRLL----KEEINYDDKLQVKNILYHAVKEMVRALK 2338
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
F++ W++GQP +V V + M + K S+ + + C D
Sbjct: 1992 FKECWKQGQPAVVSGVHKK----------MNISLWKAESISLDFGDHQADLLNCKDSIVS 2041
Query: 605 EIGVKQLFLG---SLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYM 661
VK+ + G + K+ LKLK S F+ P Y + +R LPLPEY
Sbjct: 2042 NANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYC 2101
Query: 662 DPKTGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAH 719
+P+ G N+A+ LP F DLGP + +Y T L + DVVNVL +
Sbjct: 2102 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVY 2158
>sp|P97609|HAIR_RAT Protein hairless OS=Rattus norvegicus GN=Hr PE=2 SV=2
Length = 1181
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 856 WDVFRREDV-----------------VHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHV 898
W VFR +D + P + +LD+ + RL+EE+ + WT Q
Sbjct: 1046 WHVFRAQDAQRIRRFLQMVCPAGAGTLEPGAPGSCYLDSGLRRRLREEWGVSCWTLLQAP 1105
Query: 899 GEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTECIQLIDEIRLLPTDHKAKANKFEVT 958
GEAV++PAG P+Q++ L S ++V F+SPE QL + LP DH+ + +
Sbjct: 1106 GEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDHRMLYAQMD-- 1163
Query: 959 KMALYAINTAVKEIRE 974
+ A+ AV ++E
Sbjct: 1164 RAVFQAVKVAVGTLQE 1179
>sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5
Length = 1189
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 856 WDVFRREDV-----------------VHPILDQNFFLDATHKMRLKEEFEIEPWTFEQHV 898
W VFR +D + P + +LDA + RL+EE+ + WT Q
Sbjct: 1054 WHVFRAQDAQRIRRFLQMVCPAGAGALEPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAP 1113
Query: 899 GEAVIIPAGCPYQIRNLKSCVNVVLDFISPENVTECIQLIDEIRLLPTD-HKAKANK--- 954
GEAV++PAG P+Q++ L S V+V F+SPE QL + LP D H A
Sbjct: 1114 GEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSLPPDCHLLYAQMDWA 1173
Query: 955 -FEVTKMALYAINTA 968
F+ K+A+ + A
Sbjct: 1174 VFQAVKVAVGTLQEA 1188
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 18/183 (9%)
Query: 545 FQKHWRKGQPIIVRNVLEVTSDLSWDPIVMFCTYLKNSSLKSENDGGAVEETGCSDWFEV 604
FQ+HWR+GQP++V + W + GG V+ +
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLWGTEALGAL------------GGQVQALSPLGPPQP 909
Query: 605 EIGVKQLFLGSLRGPKHADMCNEKLKLKGWLSSRLFQEQFPAHYAEIIRGLPLPEYMDPK 664
F P+ +E L L R ++ + + LPLPEY
Sbjct: 910 SSLGSTTFWEGFSWPELRPKSDEGSVL---LLHRALGDEDTSRVENLAASLPLPEYCA-L 965
Query: 665 TGVLNIATKLPQNFPTSDLGPSVYISYSSGEELAQADSVTKLCYDLCDVVNVLAHTTDVP 724
G LN+A+ LP L P ++ +Y + LC ++ D+V++L H D P
Sbjct: 966 HGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGT-KNLCVEVADLVSILVH-ADTP 1023
Query: 725 VST 727
+
Sbjct: 1024 LPA 1026
>sp|Q8L8A8|GRF2_ARATH Growth-regulating factor 2 OS=Arabidopsis thaliana GN=GRF2 PE=1
SV=1
Length = 535
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQR--KHKKIFK 65
P+ RC+RTDGK+WRC+R + D+K CE H +GRHR + +S + Q K
Sbjct: 228 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEVQSGQNQTAAAASKAVT 287
Query: 66 VQQRTEIRARKSKKLKRKKKKRVIG-ESEALDEALKKMKLKRG-DLQLELIRMVLKRE-- 121
Q+ + ++ R R + S+ ++ + + + RG + + + K
Sbjct: 288 TPQQPVVAGNTNRSNARASSNRSLAIGSQYINPSTESLPNNRGVSIYPSTVNLQPKESPV 347
Query: 122 VEKRKRQKNFDFE 134
+ ++ R N FE
Sbjct: 348 IHQKHRNNNNPFE 360
>sp|O81001|GRF1_ARATH Growth-regulating factor 1 OS=Arabidopsis thaliana GN=GRF1 PE=1
SV=1
Length = 530
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
P+ RC+RTDGK+WRC+R + D+K CE H +GRHR
Sbjct: 197 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHR 233
>sp|Q6AWY3|GRF6_ORYSJ Growth-regulating factor 6 OS=Oryza sativa subsp. japonica GN=GRF6
PE=2 SV=2
Length = 603
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNRE 48
P+ RC+RTDGK+WRC+R + D+K CE H +GRHR +
Sbjct: 224 PEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKH 264
>sp|Q6EPP9|GRF10_ORYSJ Growth-regulating factor 10 OS=Oryza sativa subsp. japonica
GN=GRF10 PE=2 SV=1
Length = 211
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
PD RC+RTDGK+WRC+R V+ K CE H +GR R +
Sbjct: 136 PDPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRSRK 175
>sp|Q6ZIK5|GRF4_ORYSJ Growth-regulating factor 4 OS=Oryza sativa subsp. japonica GN=GRF4
PE=2 SV=1
Length = 394
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQRK 59
P+ RC+RTDGK+WRC++ D K CE H +GR+R +R+ V L Q +
Sbjct: 126 PEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNR-SRKPVETQLVAQSQ 176
>sp|Q6AWX7|GRF12_ORYSJ Growth-regulating factor 12 OS=Oryza sativa subsp. japonica
GN=GRF12 PE=2 SV=1
Length = 236
Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC+R V+ K CE H +GR R +
Sbjct: 141 PEPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRSRK 180
>sp|Q9FRG8|GRF9_ORYSJ Growth-regulating factor 9 OS=Oryza sativa subsp. japonica GN=GRF9
PE=2 SV=1
Length = 426
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
P+ RC+RTDGK+WRC++ M D K CE H + RHR
Sbjct: 152 PEPGRCRRTDGKKWRCSKEAMADHKYCERHINRNRHR 188
>sp|Q6AWY2|GRF7_ORYSJ Growth-regulating factor 7 OS=Oryza sativa subsp. japonica GN=GRF7
PE=2 SV=2
Length = 411
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNRE 48
RC+RTDGK+WRC+R + D+K CE H +GRHR +
Sbjct: 113 RCRRTDGKKWRCSRDAVVDQKYCERHINRGRHRSRKH 149
>sp|Q6AWY6|GRF3_ORYSJ Growth-regulating factor 3 OS=Oryza sativa subsp. japonica GN=GRF3
PE=3 SV=2
Length = 387
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQRKHKK 62
P+ RC+RTDGK+WRC++ D K CE H +GR NR + P ++ H +
Sbjct: 115 PEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGR---NRSRKPVEAQLVAPHSQ 166
>sp|Q6AWY1|GRF8_ORYSJ Growth-regulating factor 8 OS=Oryza sativa subsp. japonica GN=GRF8
PE=2 SV=1
Length = 409
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNRE 48
RC+RTDGK+WRC+R + D+K CE H +GRHR +
Sbjct: 163 RCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRSRKH 199
>sp|Q6AWY4|GRF5_ORYSJ Growth-regulating factor 5 OS=Oryza sativa subsp. japonica GN=GRF5
PE=2 SV=1
Length = 348
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC++ D K CE H +GR+R +
Sbjct: 98 PEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRK 137
>sp|Q6AWY7|GRF2_ORYSJ Growth-regulating factor 2 OS=Oryza sativa subsp. japonica GN=GRF2
PE=3 SV=1
Length = 301
Score = 50.1 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC+R + K CE H +G++R +
Sbjct: 88 PEPGRCRRTDGKKWRCSREAYGESKYCEKHMHRGKNRSRK 127
>sp|Q9SU44|GRF8_ARATH Growth-regulating factor 8 OS=Arabidopsis thaliana GN=GRF8 PE=2
SV=1
Length = 493
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
RCKRTDGK+WRC+R V+ D+K CE H + R R +
Sbjct: 248 RCKRTDGKKWRCSRNVIPDQKYCERHTHKSRPRSRK 283
>sp|Q8L8A6|GRF5_ARATH Growth-regulating factor 5 OS=Arabidopsis thaliana GN=GRF5 PE=1
SV=1
Length = 397
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
P+ RC+RTDGK+WRC+R D K CE H +GR+R
Sbjct: 82 PEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNR 118
>sp|Q6AWX8|GRF11_ORYSJ Growth-regulating factor 11 OS=Oryza sativa subsp. japonica
GN=GRF11 PE=2 SV=1
Length = 269
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
P+ RC+RTDGK+WRC R + ++K CE H +GR R
Sbjct: 181 PEPGRCRRTDGKKWRCWRNAIANEKYCERHMHRGRKR 217
>sp|Q9ZQ12|GRF6_ARATH Growth-regulating factor 6 OS=Arabidopsis thaliana GN=GRF6 PE=2
SV=2
Length = 244
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPES 53
RC+RTDGK+WRC++ D K CE H +G++R + K P +
Sbjct: 85 RCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKPPPT 126
>sp|Q9FJB8|GRF7_ARATH Growth-regulating factor 7 OS=Arabidopsis thaliana GN=GRF7 PE=2
SV=1
Length = 365
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQR-----KHKKIFKV 66
RC+RTDGK+WRC + V+ + K CE H +GR R + P + K++ + K+
Sbjct: 112 RCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHVEPPYSRPNNNGGSVKNRDLKKL 171
Query: 67 QQRTEIRARKSKKLK 81
Q+ + K K L+
Sbjct: 172 PQKLSSSSIKDKTLE 186
>sp|Q9SJR5|GRF3_ARATH Growth-regulating factor 3 OS=Arabidopsis thaliana GN=GRF3 PE=2
SV=1
Length = 398
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
P+ RC+RTDGK+WRC+R V K CE H +GR+R
Sbjct: 145 PEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNR 181
>sp|Q6AWY8|GRF1_ORYSJ Growth-regulating factor 1 OS=Oryza sativa subsp. japonica GN=GRF1
PE=3 SV=1
Length = 397
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESL 54
P+ RC+RTDGK+WRC++ D K CE H +G++R +R+ V SL
Sbjct: 91 PEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNR-SRKPVEMSL 136
>sp|A2XA73|GRF1_ORYSI Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1
PE=2 SV=1
Length = 396
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
P+ RC+RTDGK+WRC++ D K CE H +G++R +
Sbjct: 91 PEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRK 130
>sp|Q8L8A7|GRF4_ARATH Growth-regulating factor 4 OS=Arabidopsis thaliana GN=GRF4 PE=2
SV=1
Length = 380
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 8 PDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHR 44
P+ RCKRTDGK+WRC+R V+ K C+ H +GR+R
Sbjct: 152 PEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNR 188
>sp|Q8S9M3|GRF9_ARATH Growth-regulating factor 9 OS=Arabidopsis thaliana GN=GRF9 PE=1
SV=1
Length = 431
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNR 47
RC+RTDGK+WRC+ V+ +K CE H +GR R +
Sbjct: 94 RCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRK 129
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 12 RCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVP 51
RC+RTDGK+WRC++ V+ +K C+ H HR ++K P
Sbjct: 312 RCRRTDGKKWRCSKDVLSGQKYCDKH----MHRGMKKKHP 347
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 37.7 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 75/145 (51%), Gaps = 23/145 (15%)
Query: 2 QEEEDLPDHLRCKRTDGKQWRCNRRVMEDKKLCELHHLQGRHRQNREKVPESLKIQRKHK 61
QE+E L KR + ++ +E +K +L + RQ +E++ + ++R+ +
Sbjct: 2742 QEQERLQKEEELKRQEQER-------LEREKQEQLQKEEELKRQEQERLQKEEALKRQEQ 2794
Query: 62 KIFKVQQRTEIRARKSKKLKRKKKKRVIGESE---------ALDEALKKMKLKRGDLQLE 112
+ ++Q+ E++ ++ ++L+R+K++++ E E +EALK+ + +R + E
Sbjct: 2795 E--RLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEE 2852
Query: 113 LIRMVLKREVEKRKRQKNFDFEDEE 137
L KR+ ++R +K + + E
Sbjct: 2853 L-----KRQEQERLERKKIELAERE 2872
>sp|Q922M5|CDA7L_MOUSE Cell division cycle-associated 7-like protein OS=Mus musculus
GN=Cdca7l PE=2 SV=1
Length = 438
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 224 CHWCRRRG---QSLIKCSSCRKLF--FCVDCVKEWYFDTQEDVKKA-------CPVCRGT 271
CH CR++ +++ + SC + FC C++ Y EDV+ A CP CRG
Sbjct: 341 CHQCRQKTIDTKTVCRNQSCGGVRGQFCGPCLRNRY---GEDVRTALLDPKWTCPPCRGI 397
Query: 272 CGCKAC 277
C C C
Sbjct: 398 CNCSYC 403
>sp|Q8K3I4|MYRIP_MOUSE Rab effector MyRIP OS=Mus musculus GN=Myrip PE=1 SV=1
Length = 856
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 351 LYCCSCKTSIVDYHRSCASCSYTLCLSCC 379
+ CCS T +V+ R C C +++C SCC
Sbjct: 65 MRCCSPFTFLVNARRRCGECKFSVCKSCC 93
>sp|Q7TNY7|MYRIP_RAT Rab effector MyRIP OS=Rattus norvegicus GN=Myrip PE=1 SV=1
Length = 856
Score = 33.9 bits (76), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 351 LYCCSCKTSIVDYHRSCASCSYTLCLSCC 379
+ CCS T +V+ R C C +++C SCC
Sbjct: 65 MRCCSPFTFLVNARRRCGECKFSVCKSCC 93
>sp|A8T6P4|MYRIP_DANRE Rab effector MyRIP OS=Danio rerio GN=myrip PE=1 SV=1
Length = 838
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 351 LYCCSCKTSIVDYHRSCASCSYTLCLSCCRDILQGSLSGCVRARLC-KCPNGRKVCTSGV 409
+ CCS T +++ R C C Y +C SCC S S R +C C R + T +
Sbjct: 65 IRCCSPFTFLLNPKRQCLDCHYNICKSCC------SYSQSERGYICAACQKSRHLRTQSL 118
>sp|Q8NFW9|MYRIP_HUMAN Rab effector MyRIP OS=Homo sapiens GN=MYRIP PE=1 SV=2
Length = 859
Score = 33.5 bits (75), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 351 LYCCSCKTSIVDYHRSCASCSYTLCLSCC 379
+ CCS T +V+ R C C + +C SCC
Sbjct: 65 MRCCSPFTFLVNTKRQCGDCKFNVCKSCC 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 378,074,584
Number of Sequences: 539616
Number of extensions: 16883088
Number of successful extensions: 58115
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 56584
Number of HSP's gapped (non-prelim): 1367
length of query: 979
length of database: 191,569,459
effective HSP length: 127
effective length of query: 852
effective length of database: 123,038,227
effective search space: 104828569404
effective search space used: 104828569404
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)