Your job contains 1 sequence.
>038379
MVLFDQGTYDKHFPTLRECLFLVRSCGKVSQEGTKMFVKLCFTSTGNEAGFNCLVHISGS
LASRAIKDLVARGSIRMISAYASQQIYTRVINT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038379
(93 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2049369 - symbol:AT2G21580 "AT2G21580" species... 128 2.6e-13 2
TAIR|locus:2136348 - symbol:AT4G39200 "AT4G39200" species... 125 2.2e-12 2
TAIR|locus:505006559 - symbol:AT4G34555 "AT4G34555" speci... 121 5.8e-12 2
UNIPROTKB|Q56JX5 - symbol:RPS25 "40S ribosomal protein S2... 80 5.2e-07 2
UNIPROTKB|P62851 - symbol:RPS25 "40S ribosomal protein S2... 80 5.2e-07 2
UNIPROTKB|F2Z5G8 - symbol:RPS25 "Uncharacterized protein"... 80 5.2e-07 2
MGI|MGI:1922867 - symbol:Rps25 "ribosomal protein S25" sp... 80 5.2e-07 2
RGD|621043 - symbol:Rps25 "ribosomal protein s25" species... 80 5.2e-07 2
UNIPROTKB|F1NU56 - symbol:RPS25 "Uncharacterized protein"... 79 6.5e-07 2
ZFIN|ZDB-GENE-040426-1788 - symbol:rps25 "ribosomal prote... 79 6.5e-07 2
FB|FBgn0086472 - symbol:RpS25 "Ribosomal protein S25" spe... 71 1.8e-05 2
SGD|S000003259 - symbol:RPS25A "Protein component of the ... 69 0.00012 2
SGD|S000004325 - symbol:RPS25B "Protein component of the ... 69 0.00012 2
DICTYBASE|DDB_G0271148 - symbol:rps25 "40S ribosomal prot... 67 0.00030 2
POMBASE|SPAC694.05c - symbol:rps2502 "40S ribosomal prote... 85 0.00072 1
>TAIR|locus:2049369 [details] [associations]
symbol:AT2G21580 "AT2G21580" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA]
EnsemblPlants:AT2G21580.1 Pfam:PF03297 GO:GO:0009506 GO:GO:0005774
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0022627 EMBL:AC007119
EMBL:AY048211 EMBL:AY091695 IPI:IPI00544795 PIR:H84602
RefSeq:NP_179752.1 UniGene:At.14390 ProteinModelPortal:Q9SIK2
SMR:Q9SIK2 STRING:Q9SIK2 PaxDb:Q9SIK2 PRIDE:Q9SIK2 GeneID:816696
KEGG:ath:AT2G21580 TAIR:At2g21580 eggNOG:COG4901
HOGENOM:HOG000203673 InParanoid:Q9SIK2 KO:K02975 OMA:QLIYTRN
PhylomeDB:Q9SIK2 ProtClustDB:CLSN2913154 Genevestigator:Q9SIK2
InterPro:IPR004977 PANTHER:PTHR12850 ProDom:PD012268 Uniprot:Q9SIK2
Length = 108
Score = 128 (50.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 25/39 (64%), Positives = 34/39 (87%)
Query: 55 VHISGSLASRAIKDLVARGSIRMISAYASQQIYTRVINT 93
+ I+GSLA RAI++L+A+G IRM+SA++SQQIYTR NT
Sbjct: 70 MRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
Score = 59 (25.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 1 MVLFDQGTYDK 11
MVLFDQGTYDK
Sbjct: 40 MVLFDQGTYDK 50
>TAIR|locus:2136348 [details] [associations]
symbol:AT4G39200 "AT4G39200" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] EnsemblPlants:AT4G39200.1
Pfam:PF03297 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161594
EMBL:AL050351 GO:GO:0022627 eggNOG:COG4901 HOGENOM:HOG000203673
KO:K02975 ProtClustDB:CLSN2913154 InterPro:IPR004977
PANTHER:PTHR12850 ProDom:PD012268 EMBL:AY037192 EMBL:AY057720
EMBL:AY085575 IPI:IPI00524965 PIR:T08568 RefSeq:NP_195631.1
UniGene:At.22591 ProteinModelPortal:Q9T029 SMR:Q9T029 STRING:Q9T029
PaxDb:Q9T029 PRIDE:Q9T029 GeneID:830075 KEGG:ath:AT4G39200
GeneFarm:984 TAIR:At4g39200 InParanoid:Q9T029 OMA:WIYTRTT
PhylomeDB:Q9T029 Genevestigator:Q9T029 GermOnline:AT4G39200
Uniprot:Q9T029
Length = 108
Score = 125 (49.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 24/39 (61%), Positives = 34/39 (87%)
Query: 55 VHISGSLASRAIKDLVARGSIRMISAYASQQIYTRVINT 93
+ I+GSLA RAI++L+A+G IRM++A++SQQIYTR NT
Sbjct: 70 MRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
Score = 53 (23.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
MVLFDQ TYDK
Sbjct: 40 MVLFDQATYDK 50
>TAIR|locus:505006559 [details] [associations]
symbol:AT4G34555 "AT4G34555" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA]
EnsemblPlants:AT4G34555.1 Pfam:PF03297 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161585 EMBL:AL023094 GO:GO:0022627
eggNOG:COG4901 KO:K02975 ProtClustDB:CLSN2913154 InterPro:IPR004977
PANTHER:PTHR12850 ProDom:PD012268 EMBL:AK117527 EMBL:AK176080
EMBL:BT025584 EMBL:AY088627 IPI:IPI00530685 RefSeq:NP_567968.1
UniGene:At.31494 ProteinModelPortal:Q8GYL5 SMR:Q8GYL5 STRING:Q8GYL5
GeneID:829607 KEGG:ath:AT4G34555 GeneFarm:987 TAIR:At4g34555
InParanoid:Q8GYL5 OMA:YKMITIS PhylomeDB:Q8GYL5
Genevestigator:Q8GYL5 GermOnline:AT4G34555 Uniprot:Q8GYL5
Length = 108
Score = 121 (47.7 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 23/35 (65%), Positives = 33/35 (94%)
Query: 55 VHISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
+ I+GSLA RAI++L+A+G+IRM+SA++SQQIYTR
Sbjct: 70 LRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTR 104
Score = 53 (23.7 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
MVLFDQ TYDK
Sbjct: 40 MVLFDQATYDK 50
>UNIPROTKB|Q56JX5 [details] [associations]
symbol:RPS25 "40S ribosomal protein S25" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] Pfam:PF03297
GO:GO:0005840 eggNOG:COG4901 HOGENOM:HOG000203673 KO:K02975
OMA:QLIYTRN InterPro:IPR004977 PANTHER:PTHR12850 ProDom:PD012268
GeneTree:ENSGT00390000004856 EMBL:AY911354 EMBL:BC102560
IPI:IPI00691584 RefSeq:NP_001020486.1 RefSeq:XP_001790348.1
RefSeq:XP_003583143.1 RefSeq:XP_003583144.1 UniGene:Bt.28971
ProteinModelPortal:Q56JX5 SMR:Q56JX5 STRING:Q56JX5 PRIDE:Q56JX5
Ensembl:ENSBTAT00000025270 Ensembl:ENSBTAT00000040046 GeneID:282052
GeneID:785691 KEGG:bta:282052 KEGG:bta:785691 CTD:6230
HOVERGEN:HBG054579 InParanoid:Q56JX5 OrthoDB:EOG4TMR3R
NextBio:20805911 Uniprot:Q56JX5
Length = 125
Score = 80 (33.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+++G I+++S + +Q IYTR
Sbjct: 79 IRGSLARAALQELLSKGLIKLVSKHRAQVIYTR 111
Score = 46 (21.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 47 LVLFDKATYDK 57
>UNIPROTKB|P62851 [details] [associations]
symbol:RPS25 "40S ribosomal protein S25" species:9606 "Homo
sapiens" [GO:0000028 "ribosomal small subunit assembly"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006412 "translation" evidence=IC;NAS;TAS]
[GO:0015935 "small ribosomal subunit" evidence=IDA] [GO:0005840
"ribosome" evidence=NAS;IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0003723 "RNA binding" evidence=NAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 Pfam:PF03297 Reactome:REACT_116125
GO:GO:0005730 GO:GO:0000184 EMBL:CH471065 GO:GO:0006413
GO:GO:0003723 GO:GO:0003735 GO:GO:0000028 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 eggNOG:COG4901 HOGENOM:HOG000203673 KO:K02975
OMA:QLIYTRN InterPro:IPR004977 PANTHER:PTHR12850 ProDom:PD012268
CTD:6230 HOVERGEN:HBG054579 OrthoDB:EOG4TMR3R ChiTaRS:RPS25
EMBL:M64716 EMBL:AB061844 EMBL:AK311883 EMBL:BC003537 EMBL:BC004294
EMBL:BC004986 IPI:IPI00012750 PIR:JQ1347 RefSeq:NP_001019.1
UniGene:Hs.512676 ProteinModelPortal:P62851 SMR:P62851
IntAct:P62851 MINT:MINT-5000124 STRING:P62851 PhosphoSite:P62851
DMDM:51338648 PaxDb:P62851 PRIDE:P62851 DNASU:6230
Ensembl:ENST00000527673 Ensembl:ENST00000573464 GeneID:6230
KEGG:hsa:6230 UCSC:uc001pun.2 GeneCards:GC11M118886 HGNC:HGNC:10413
HPA:HPA031801 MIM:180465 neXtProt:NX_P62851 PharmGKB:PA34817
InParanoid:P62851 PhylomeDB:P62851 GenomeRNAi:6230 NextBio:24185
ArrayExpress:P62851 Bgee:P62851 CleanEx:HS_RPS25
Genevestigator:P62851 GermOnline:ENSG00000118181 Uniprot:P62851
Length = 125
Score = 80 (33.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+++G I+++S + +Q IYTR
Sbjct: 79 IRGSLARAALQELLSKGLIKLVSKHRAQVIYTR 111
Score = 46 (21.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 47 LVLFDKATYDK 57
>UNIPROTKB|F2Z5G8 [details] [associations]
symbol:RPS25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] Pfam:PF03297
GO:GO:0005730 GO:GO:0022627 OMA:QLIYTRN InterPro:IPR004977
PANTHER:PTHR12850 ProDom:PD012268 GeneTree:ENSGT00390000004856
EMBL:CU695209 Ensembl:ENSSSCT00000016469 Uniprot:F2Z5G8
Length = 125
Score = 80 (33.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+++G I+++S + +Q IYTR
Sbjct: 79 IRGSLARAALQELLSKGLIKLVSKHRAQVIYTR 111
Score = 46 (21.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 47 LVLFDKATYDK 57
>MGI|MGI:1922867 [details] [associations]
symbol:Rps25 "ribosomal protein S25" species:10090 "Mus
musculus" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005840
"ribosome" evidence=ISO] [GO:0015935 "small ribosomal subunit"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
MGI:MGI:1922867 Pfam:PF03297 GO:GO:0005730 GO:GO:0003735
GO:GO:0000028 GO:GO:0022627 eggNOG:COG4901 HOGENOM:HOG000203673
KO:K02975 OMA:QLIYTRN InterPro:IPR004977 PANTHER:PTHR12850
ProDom:PD012268 CTD:6230 HOVERGEN:HBG054579 OrthoDB:EOG4TMR3R
EMBL:AK012696 EMBL:AK077450 EMBL:BC002088 EMBL:BC027208
EMBL:BC079541 IPI:IPI00137735 RefSeq:NP_077228.1 UniGene:Mm.292027
UniGene:Mm.391885 UniGene:Mm.427157 ProteinModelPortal:P62852
SMR:P62852 IntAct:P62852 STRING:P62852 PhosphoSite:P62852
PaxDb:P62852 PRIDE:P62852 Ensembl:ENSMUST00000080300 GeneID:75617
KEGG:mmu:75617 InParanoid:P62852 NextBio:343524 Bgee:P62852
CleanEx:MM_RPS25 Genevestigator:P62852
GermOnline:ENSMUSG00000009927 Uniprot:P62852
Length = 125
Score = 80 (33.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+++G I+++S + +Q IYTR
Sbjct: 79 IRGSLARAALQELLSKGLIKLVSKHRAQVIYTR 111
Score = 46 (21.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 47 LVLFDKATYDK 57
>RGD|621043 [details] [associations]
symbol:Rps25 "ribosomal protein s25" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0003735 "structural constituent of ribosome"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=ISO]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO;IDA] RGD:621043
Pfam:PF03297 GO:GO:0005730 GO:GO:0003735 GO:GO:0000028
GO:GO:0022627 eggNOG:COG4901 HOGENOM:HOG000203673 KO:K02975
InterPro:IPR004977 PANTHER:PTHR12850 ProDom:PD012268
GeneTree:ENSGT00390000004856 CTD:6230 HOVERGEN:HBG054579
OrthoDB:EOG4TMR3R EMBL:X62482 EMBL:BC103658 IPI:IPI00215184
PIR:A38969 RefSeq:NP_001005528.1 UniGene:Rn.198166 UniGene:Rn.60855
ProteinModelPortal:P62853 SMR:P62853 IntAct:P62853 STRING:P62853
PRIDE:P62853 Ensembl:ENSRNOT00000029546 GeneID:122799
KEGG:rno:122799 UCSC:RGD:621043 InParanoid:P62853 NextBio:620451
Genevestigator:P62853 GermOnline:ENSRNOG00000027503 Uniprot:P62853
Length = 125
Score = 80 (33.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+++G I+++S + +Q IYTR
Sbjct: 79 IRGSLARAALQELLSKGLIKLVSKHRAQVIYTR 111
Score = 46 (21.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 47 LVLFDKATYDK 57
>UNIPROTKB|F1NU56 [details] [associations]
symbol:RPS25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] Pfam:PF03297
GO:GO:0005730 GO:GO:0022627 OMA:QLIYTRN InterPro:IPR004977
PANTHER:PTHR12850 ProDom:PD012268 GeneTree:ENSGT00390000004856
EMBL:AADN02058036 IPI:IPI00586834 Ensembl:ENSGALT00000012476
Uniprot:F1NU56
Length = 139
Score = 79 (32.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+ +G I+++S + +Q IYTR
Sbjct: 93 IRGSLARAALQELLGKGLIKLVSKHRAQVIYTR 125
Score = 46 (21.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 61 LVLFDKATYDK 71
>ZFIN|ZDB-GENE-040426-1788 [details] [associations]
symbol:rps25 "ribosomal protein S25" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] Pfam:PF03297
ZFIN:ZDB-GENE-040426-1788 InterPro:IPR004977 PANTHER:PTHR12850
ProDom:PD012268 GeneTree:ENSGT00390000004856 EMBL:CU633908
Ensembl:ENSDART00000061274 Bgee:G1K2N0 Uniprot:G1K2N0
Length = 132
Score = 79 (32.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A+++L+ +G I+++S + +Q IYTR
Sbjct: 86 IRGSLARAALQELLGKGLIKLVSKHRAQVIYTR 118
Score = 46 (21.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 1 MVLFDQGTYDK 11
+VLFD+ TYDK
Sbjct: 54 LVLFDKATYDK 64
>FB|FBgn0086472 [details] [associations]
symbol:RpS25 "Ribosomal protein S25" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
Pfam:PF03297 EMBL:AE014297 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4901 KO:K02975 OMA:QLIYTRN InterPro:IPR004977
PANTHER:PTHR12850 ProDom:PD012268 GeneTree:ENSGT00390000004856
CTD:6230 EMBL:AY071076 EMBL:BT050549 EMBL:U03289 RefSeq:NP_524315.2
RefSeq:NP_731544.1 UniGene:Dm.1146 ProteinModelPortal:P48588
SMR:P48588 DIP:DIP-17632N IntAct:P48588 MINT:MINT-943476
STRING:P48588 PaxDb:P48588 EnsemblMetazoa:FBtr0082369
EnsemblMetazoa:FBtr0082370 GeneID:41343 KEGG:dme:Dmel_CG6684
FlyBase:FBgn0086472 InParanoid:P48588 OrthoDB:EOG4XSJ6M
PhylomeDB:P48588 ChiTaRS:RPS25 GenomeRNAi:41343 NextBio:823370
Bgee:P48588 GermOnline:CG6684 Uniprot:P48588
Length = 117
Score = 71 (30.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA RA+ +L +G I+ + + SQ IYTR
Sbjct: 78 IRGSLAKRALIELREKGLIKQVVQHHSQVIYTR 110
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 2 VLFDQGTYDK 11
VLFD+ TY+K
Sbjct: 47 VLFDKATYEK 56
>SGD|S000003259 [details] [associations]
symbol:RPS25A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] SGD:S000003259
Pfam:PF03297 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G
PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G
EMBL:DQ115389 eggNOG:COG4901 HOGENOM:HOG000203673 KO:K02975
OMA:QLIYTRN InterPro:IPR004977 PANTHER:PTHR12850 ProDom:PD012268
OrthoDB:EOG4X0R34 EMBL:X03013 EMBL:Z72812 EMBL:EF123137 PIR:S05844
RefSeq:NP_011541.1 ProteinModelPortal:Q3E792 SMR:Q3E792
IntAct:Q3E792 MINT:MINT-490524 STRING:Q3E792 PaxDb:Q3E792
EnsemblFungi:YGR027C GeneID:852911 KEGG:sce:YGR027C CYGD:YGR027c
GeneTree:ENSGT00390000004856 NextBio:972603 Genevestigator:Q3E792
Uniprot:Q3E792
Length = 108
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A++ L G I+ IS ++ Q IYTR
Sbjct: 71 IGGSLARIALRHLEKEGIIKPISKHSKQAIYTR 103
Score = 34 (17.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 2 VLFDQGTYD---KHFPTLR 17
V+ DQ YD K PT R
Sbjct: 40 VILDQEKYDRILKEVPTYR 58
>SGD|S000004325 [details] [associations]
symbol:RPS25B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0002181
"cytoplasmic translation" evidence=IC] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IDA] SGD:S000004325 Pfam:PF03297
EMBL:BK006945 GO:GO:0003735 GO:GO:0002181 EMBL:U19028 GO:GO:0022627
HOGENOM:HOG000203673 KO:K02975 InterPro:IPR004977 PANTHER:PTHR12850
ProDom:PD012268 OMA:YKMITIS OrthoDB:EOG4X0R34
GeneTree:ENSGT00390000004856 EMBL:AY693146 EMBL:EF123130 PIR:S51338
RefSeq:NP_013437.1 ProteinModelPortal:P0C0T4 SMR:P0C0T4
DIP:DIP-5077N IntAct:P0C0T4 MINT:MINT-490537 STRING:P0C0T4
EnsemblFungi:YLR333C GeneID:851045 KEGG:sce:YLR333C CYGD:YLR333c
NextBio:967653 Genevestigator:P0C0T4 Uniprot:P0C0T4
Length = 108
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
I GSLA A++ L G I+ IS ++ Q IYTR
Sbjct: 71 IGGSLARIALRHLEKEGIIKPISKHSKQAIYTR 103
Score = 34 (17.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 2 VLFDQGTYD---KHFPTLR 17
V+ DQ YD K PT R
Sbjct: 40 VILDQEKYDRILKEVPTYR 58
>DICTYBASE|DDB_G0271148 [details] [associations]
symbol:rps25 "40S ribosomal protein S25"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0271148 Pfam:PF03297 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
GO:GO:0005840 eggNOG:COG4901 KO:K02975 InterPro:IPR004977
PANTHER:PTHR12850 ProDom:PD012268 OMA:GILCKEV EMBL:X69484
PIR:JC1411 RefSeq:XP_645662.1 STRING:Q03409 PRIDE:Q03409
EnsemblProtists:DDB0215350 GeneID:8617854 KEGG:ddi:DDB_G0271148
Uniprot:Q03409
Length = 110
Score = 67 (28.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 58 SGSLASRAIKDLVARGSIRMISAYASQQIYTR 89
+GSLA RAIK+L+++G I+ I +YT+
Sbjct: 77 NGSLARRAIKELLSKGLIKQIIKGHGNGVYTK 108
Score = 33 (16.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 2 VLFDQGTYDK 11
+LFD+ TY K
Sbjct: 45 ILFDKETYAK 54
>POMBASE|SPAC694.05c [details] [associations]
symbol:rps2502 "40S ribosomal protein S25 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] PomBase:SPAC694.05c
Pfam:PF03297 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022627 eggNOG:COG4901 HOGENOM:HOG000203673
KO:K02975 InterPro:IPR004977 PANTHER:PTHR12850 ProDom:PD012268
EMBL:AB000398 PIR:T50250 RefSeq:NP_594485.1 IntAct:P79009
STRING:P79009 PRIDE:P79009 EnsemblFungi:SPAC694.05c.1
GeneID:2543307 KEGG:spo:SPAC694.05c OMA:GILCKEV OrthoDB:EOG4X0R34
NextBio:20804324 Uniprot:P79009
Length = 89
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 57 ISGSLASRAIKDLVARGSIRMISAYASQQIYTRV 90
I+GSLA AI+DL RG I+ + ++ Q IYTRV
Sbjct: 51 INGSLARIAIRDLAERGVIQKVDQHSKQAIYTRV 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 93 93 0.00091 102 3 11 22 0.41 29
29 0.41 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 522 (56 KB)
Total size of DFA: 100 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.02u 0.20s 9.22t Elapsed: 00:00:00
Total cpu time: 9.02u 0.20s 9.22t Elapsed: 00:00:00
Start: Sat May 11 04:12:45 2013 End: Sat May 11 04:12:45 2013