BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038380
MSQAQPRRPGADDQQQQPIKYGDFFNVSGDLAQKPIAPEDAAMMQTAEATIMGQTQKGGP
AAAMQSAAARNEGAGFVGHRDVTDVAGDQGVTVTETDVPGRRIITESVGGQVVGRHEEPT
PVSLAPTTGRVEQGAITIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTVTTPGLA
ASAQSAAAHNETVDRDEDKIKLNQVLAGATAKLAADKAVTRQDAEGIASAEQRNNPNADT
HPGGVAASVAAAARLNENVNG

High Scoring Gene Products

Symbol, full name Information P value
AT3G22490 protein from Arabidopsis thaliana 3.2e-65
ATECP31
AT3G22500
protein from Arabidopsis thaliana 3.9e-60
AT5G27980 protein from Arabidopsis thaliana 1.1e-21
RAB28
responsive to abscisic acid 28
protein from Arabidopsis thaliana 4.0e-19
AT5G53260 protein from Arabidopsis thaliana 3.9e-12
AT5G53270 protein from Arabidopsis thaliana 1.1e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038380
        (261 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077081 - symbol:AT3G22490 "AT3G22490" species...   664  3.2e-65   1
TAIR|locus:2076996 - symbol:ATECP31 "AT3G22500" species:3...   616  3.9e-60   1
TAIR|locus:2143789 - symbol:AT5G27980 "AT5G27980" species...   253  1.1e-21   1
TAIR|locus:2007529 - symbol:RAB28 "responsive to abscisic...   229  4.0e-19   1
TAIR|locus:2154242 - symbol:AT5G53260 "AT5G53260" species...   163  3.9e-12   1
TAIR|locus:2154252 - symbol:AT5G53270 "AT5G53270" species...   140  1.1e-09   1


>TAIR|locus:2077081 [details] [associations]
            symbol:AT3G22490 "AT3G22490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=ISS] Pfam:PF04927 EMBL:CP002686
            EMBL:AP000731 UniGene:At.64534 InterPro:IPR007011
            ProtClustDB:CLSN2684142 EMBL:BT002907 EMBL:BT004425 IPI:IPI00543172
            RefSeq:NP_188888.1 PRIDE:Q9LJ97 EnsemblPlants:AT3G22490.1
            GeneID:821820 KEGG:ath:AT3G22490 TAIR:At3g22490
            HOGENOM:HOG000239749 InParanoid:Q9LJ97 OMA:KPVAPQD PhylomeDB:Q9LJ97
            ArrayExpress:Q9LJ97 Genevestigator:Q9LJ97 Uniprot:Q9LJ97
        Length = 262

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 142/267 (53%), Positives = 162/267 (60%)

Query:     1 MSQA-QPRRPGADDQQQQPIKYGDFFNVSGDLAQKPIAPEDAAMMQTAEATIMGQTQKGG 59
             MSQ  QP+RP      Q+P+ YGD F VSG+LA KPIAPEDA MMQ AE  + G TQKGG
Sbjct:     1 MSQEEQPKRP------QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGG 54

Query:    60 PXXXXXXXXXRNEGAGFVGHRDVTDVAGDQGVTVTETDVPGRRIITESVGGQVVGRHEEP 119
                        N+  GFV   D TD+A ++GVTV +TDVPG R+ TE VGGQVVG++ EP
Sbjct:    55 AAAVMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEP 114

Query:   120 TPVSLAPT-----TGRVEQGAITIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTV 174
              PV+ A        G   Q AITIGEALE T QTAG+KPVDQSDAAAIQAAEVRA G+ V
Sbjct:   115 RPVATAAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNV 174

Query:   175 TTPG-LXXXXXXXXXHNETVDRDEDKIKLNQXXXXXXXXXXXXXXXXRQDAEGIASAEQR 233
               PG +         HN T+DRDEDKIKL                  RQDAEG+ SAE R
Sbjct:   175 IAPGGIAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELR 234

Query:   234 NNPNADTHPGGXXXXXXXXXRLNENVN 260
             NNPN  THPGG         RLNE  +
Sbjct:   235 NNPNLSTHPGGVAASITAAARLNERAD 261


>TAIR|locus:2076996 [details] [associations]
            symbol:ATECP31 "AT3G22500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=ISS] [GO:0016114 "terpenoid biosynthetic
            process" evidence=RCA] Pfam:PF04927 EMBL:CP002686 EMBL:AP000731
            InterPro:IPR007011 EMBL:AY052316 EMBL:BT000845 IPI:IPI00519010
            RefSeq:NP_188889.1 UniGene:At.280 PRIDE:Q9LJ95 ProMEX:Q9LJ95
            EnsemblPlants:AT3G22500.1 GeneID:821821 KEGG:ath:AT3G22500
            TAIR:At3g22500 InParanoid:Q9LJ95 OMA:AATTNIR PhylomeDB:Q9LJ95
            ProtClustDB:CLSN2684142 Genevestigator:Q9LJ95 Uniprot:Q9LJ95
        Length = 256

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 133/262 (50%), Positives = 156/262 (59%)

Query:     1 MSQAQPRRPGADDQQQQPIKYGDFFNVSGDLAQKPIAPEDAAMMQTAEATIMGQTQKGGP 60
             MSQ QPRRP      ++P+KYGD F VSG+LA KPIAPEDA MMQ+AE  + G TQKGGP
Sbjct:     1 MSQEQPRRP------REPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGP 54

Query:    61 XXXXXXXXXRNEGAGFVGHRDVTDVAGDQGVTVTETDVPGRRIITESVGGQVVGRHEEPT 120
                       N   GFV   D T++  ++G TV +T VP   + TE VGGQVVG+H EP 
Sbjct:    55 AAVMQSAATTNIRGGFVHPDDKTELVAERGATVEQT-VPAATVTTEFVGGQVVGQHVEPR 113

Query:   121 PV-SLAPTTGRVEQGAITIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTVTT-PG 178
              V + A T     Q  ITIGEALE T +TAG+KPVDQSDAAAIQAAE+RA+G+ V    G
Sbjct:   114 RVVAAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAG 173

Query:   179 LXXXXXXXXXHNETVDRDEDKIKLNQXXXXXXXXXXXXXXXXRQDAEGIASAEQRNNPNA 238
             +         HN TVDRDE KIKL                  R+DAEG+ SAE RNNP  
Sbjct:   174 VAASAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPKL 233

Query:   239 DTHPGGXXXXXXXXXRLNENVN 260
              THPGG         RLNE V+
Sbjct:   234 CTHPGGVAASLTVAARLNERVD 255


>TAIR|locus:2143789 [details] [associations]
            symbol:AT5G27980 "AT5G27980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] [GO:0009860 "pollen tube growth"
            evidence=RCA] Pfam:PF04927 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR007011 EMBL:AK118645 IPI:IPI00541342 RefSeq:NP_198150.1
            UniGene:At.30773 PaxDb:Q8GWT7 PRIDE:Q8GWT7
            EnsemblPlants:AT5G27980.1 GeneID:832868 KEGG:ath:AT5G27980
            TAIR:At5g27980 eggNOG:NOG298104 HOGENOM:HOG000244195 OMA:GRTNIMP
            PhylomeDB:Q8GWT7 ProtClustDB:CLSN2916666 Genevestigator:Q8GWT7
            Uniprot:Q8GWT7
        Length = 192

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 64/185 (34%), Positives = 89/185 (48%)

Query:    81 DVTDVAGD-QGVTVTETDVPG-----RRIITESVGGQVVGRHEEPTPVSLAPTTGRVEQG 134
             D  DV G+ + ++ TE  +       + ++ E+ G Q  G   +   V+  P      +G
Sbjct:    11 DCADVKGEAEKISTTEGGIKAAEDKEKGVVAEASGEQAEGEVNQKKVVA-NPLKS---EG 66

Query:   135 AITIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTVTTPG-LXXXXXXXXXHNETV 193
              ITIGEALE    TAG+KPV+ SDAAAIQAAEVRATG T   PG +          N  +
Sbjct:    67 TITIGEALEAAVLTAGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSAATLNARI 126

Query:   194 DRDEDKIKLNQXXXXXXXXXXXXXXXXRQDAEGIASAEQRNNPNADTHPGGXXXXXXXXX 253
               D+ K  L                  R+DAEG+  AE RN+P+  T+P G         
Sbjct:   127 GSDDTKTTLADVLTGASSKLPSDKAATRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAAA 186

Query:   254 RLNEN 258
             R+N++
Sbjct:   187 RINQS 191


>TAIR|locus:2007529 [details] [associations]
            symbol:RAB28 "responsive to abscisic acid 28"
            species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0006873 "cellular ion homeostasis"
            evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0010226 "response to lithium ion" evidence=IMP] Pfam:PF04927
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005730 GO:GO:0010226
            GO:GO:0009845 GO:GO:0006873 EMBL:AC006550 InterPro:IPR007011
            HOGENOM:HOG000244195 IPI:IPI00539885 PIR:C86162 RefSeq:NP_171811.1
            UniGene:At.42559 PaxDb:Q9SA57 PRIDE:Q9SA57
            EnsemblPlants:AT1G03120.1 GeneID:839571 KEGG:ath:AT1G03120
            TAIR:At1g03120 eggNOG:NOG303957 OMA:DDVARKQ PhylomeDB:Q9SA57
            ProtClustDB:CLSN2913512 Genevestigator:Q9SA57 Uniprot:Q9SA57
        Length = 182

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 59/160 (36%), Positives = 75/160 (46%)

Query:   104 ITESVGGQVVGRHEEPT---PVSLAPTTGRVEQGAITIGEALETTAQTAGDKPVDQSDAA 160
             I  SV G  V R +  +   P     T G V+   +TIGEALE TA + GDKPVD+ DAA
Sbjct:    25 IVFSVSGDDVARKQGDSFSQPDPTVATMGSVD--TVTIGEALEATALSLGDKPVDRRDAA 82

Query:   161 AIQAAEVRATGSTVTTPG-LXXXXXXXXXHNETVDRDEDKIKLNQXXXXXXXXXXXXXXX 219
             AIQAAE RATG +   PG L          NE    +EDK+ +                 
Sbjct:    83 AIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGDKVV 142

Query:   220 XRQDAEGIASAEQRNNPNADTHPGGXXXXXXXXXRLNENV 259
               +DAE +  AE R++    T PGG         RLN+ +
Sbjct:   143 TSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGARLNQQL 182


>TAIR|locus:2154242 [details] [associations]
            symbol:AT5G53260 "AT5G53260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] Pfam:PF04927 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 InterPro:IPR007011
            HOGENOM:HOG000152512 ProtClustDB:CLSN2686524 IPI:IPI00516866
            RefSeq:NP_200138.1 UniGene:At.55521 PaxDb:Q9FK15
            EnsemblPlants:AT5G53260.1 GeneID:835407 KEGG:ath:AT5G53260
            TAIR:At5g53260 eggNOG:NOG329343 OMA:ISVEEHF PhylomeDB:Q9FK15
            Genevestigator:Q9FK15 Uniprot:Q9FK15
        Length = 176

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 46/169 (27%), Positives = 73/169 (43%)

Query:    92 TVTETDVPGRRIITESV-GGQVVGRHEEPTPVSLAPTTGRVEQGAITIGEALETTAQTAG 150
             +VT   V     +++S  GGQ VG  EE +  + A   GR    + T+ EAL+  +   G
Sbjct:     9 SVTNISVEEHFSVSQSSPGGQFVGPTEEISTAAEA-LIGR----STTLTEALKAASMNVG 63

Query:   151 DKPVDQSDAAAIQAAEVRATGSTVTTPG-LXXXXXXXXXHNETVDRDEDKIKLNQXXXXX 209
              KPV+ +D AAI+  E RA G  + + G +          N+ + +D +K  L       
Sbjct:    64 HKPVETTDVAAIKEVETRAIGGDIESEGGVTAVASKAVARNQKIGKDNEKTNLGDVIAEI 123

Query:   210 XXXXXXXXXXXRQDAEGIASAEQRNNPNADTHPGGXXXXXXXXXRLNEN 258
                         +DAE +  AE  ++P  +  PGG         +LN +
Sbjct:   124 DVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVAAAYKLNHD 172


>TAIR|locus:2154252 [details] [associations]
            symbol:AT5G53270 "AT5G53270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] Pfam:PF04927 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 InterPro:IPR007011
            IPI:IPI00521222 RefSeq:NP_200139.1 UniGene:At.65673
            EnsemblPlants:AT5G53270.1 GeneID:835408 KEGG:ath:AT5G53270
            TAIR:At5g53270 eggNOG:NOG277291 HOGENOM:HOG000152512 OMA:RKPVETT
            PhylomeDB:Q9FK14 ProtClustDB:CLSN2686524 Genevestigator:Q9FK14
            Uniprot:Q9FK14
        Length = 159

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 34/123 (27%), Positives = 51/123 (41%)

Query:   137 TIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTVTTPG-LXXXXXXXXXHNETVDR 195
             T+ EAL+  A   G KPV+ +D AAI+  E RA G  + + G +          N+ +  
Sbjct:    31 TLTEALKAAAINVGRKPVETTDLAAIKEVEARAIGGDIESDGGVTAVASKAVARNQKIGE 90

Query:   196 DEDKIKLNQXXXXXXXXXXXXXXXXRQDAEGIASAEQRNNPNADTHPGGXXXXXXXXXRL 255
             D +K  L                   +DAE +  AE  ++P  +  PGG         +L
Sbjct:    91 DNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVTAAYKL 150

Query:   256 NEN 258
             N N
Sbjct:   151 NCN 153


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.127   0.355    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      261       218   0.00091  112 3  11 23  0.37    34
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  504 (54 KB)
  Total size of DFA:  133 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.59u 0.19s 16.78t   Elapsed:  00:00:01
  Total cpu time:  16.59u 0.19s 16.78t   Elapsed:  00:00:01
  Start:  Sat May 11 04:13:36 2013   End:  Sat May 11 04:13:37 2013

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