BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038380
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum PE=4
SV=1
Length = 264
Score = 348 bits (893), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/264 (74%), Positives = 219/264 (82%), Gaps = 5/264 (1%)
Query: 1 MSQAQPRRP---GADDQQQQPIKYGDFFNVSGDLAQKPIAPEDAAMMQTAEATIMGQTQK 57
MSQ QPRRP + Q+PIKYGD FNVSG+LA KPIAP+DAAMMQTAE ++GQTQK
Sbjct: 1 MSQGQPRRPQQPAGQGENQEPIKYGDVFNVSGELANKPIAPQDAAMMQTAETQVLGQTQK 60
Query: 58 GGPAAAMQSAAARNEGAGFVGHRDVTDVAGDQGVTVTETDVPGRRIITESVGGQVVGRHE 117
GG AA MQ+AA RNE G VGH D+TD+AG+QGVT+ ETDV GRRIITE+V GQVVG++
Sbjct: 61 GGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVTLAETDVAGRRIITEAVAGQVVGQYV 120
Query: 118 EPTPVSLAPTTGRVEQGAITIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTVTTP 177
+ TPV + G V Q AITIGEALE TA+TAGDKPVDQSDAAA+QAAEVRATGS V P
Sbjct: 121 QATPV-MTSQVGVVLQNAITIGEALEATAKTAGDKPVDQSDAAAVQAAEVRATGSNVIIP 179
Query: 178 -GLAASAQSAAAHNETVDRDEDKIKLNQVLAGATAKLAADKAVTRQDAEGIASAEQRNNP 236
GLAA+AQSAAAHN T+DRDE+KIKLNQVL GATAKL ADKAVTRQDAEG+ SAE RNNP
Sbjct: 180 GGLAATAQSAAAHNATLDRDEEKIKLNQVLTGATAKLPADKAVTRQDAEGVVSAELRNNP 239
Query: 237 NADTHPGGVAASVAAAARLNENVN 260
N THPGGVAAS+AAAARLNENVN
Sbjct: 240 NVATHPGGVAASMAAAARLNENVN 263
>sp|B1XPQ6|PROB_SYNP2 Glutamate 5-kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=proB PE=3 SV=1
Length = 374
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 23/165 (13%)
Query: 92 TVTETDVPGRRIITES-----VGGQVVGRHEEPTPVSLAPTTGRVEQG-AITIGEALETT 145
T+T G R+I S VG V+ R E P ++ V QG I + + L T+
Sbjct: 33 TLTRLKQKGHRVILVSSGAVGVGCGVLKRSERPKKIAEKQAIAAVGQGRLIRLYDDLFTS 92
Query: 146 AQTAGDK-------PVDQSDAAAIQAAEVRATGSTVTTPGLAASAQSAAAHNETVDRDED 198
Q A + VD++ +Q A L S N+TV DE
Sbjct: 93 LQQAIAQVLLTRRDLVDRTSYLTVQEA---------LNAMLDLSVIPIVNENDTVAVDEL 143
Query: 199 KIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADTHP 242
K N L+ A L AD V D + + SA+ R NP+A P
Sbjct: 144 KFGDNDTLSALVASLVNADWLVLLTDVDRLYSADPRQNPDARPIP 188
>sp|Q9HVL9|PROB_PSEAE Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=proB PE=3 SV=1
Length = 372
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPDA 189
>sp|Q02GB2|PROB_PSEAB Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=proB PE=3 SV=1
Length = 372
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPDA 189
>sp|B7V0A8|PROB_PSEA8 Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain LESB58)
GN=proB PE=3 SV=1
Length = 372
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPDA 189
>sp|A6VBV2|PROB_PSEA7 Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain PA7) GN=proB
PE=3 SV=1
Length = 372
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPDA 189
>sp|Q4K5T9|PROB_PSEF5 Glutamate 5-kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=proB PE=3 SV=2
Length = 372
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPDA 189
>sp|Q889F0|PROB_PSESM Glutamate 5-kinase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=proB PE=3 SV=1
Length = 372
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPDA 189
>sp|B0KMF7|PROB_PSEPG Glutamate 5-kinase OS=Pseudomonas putida (strain GB-1) GN=proB PE=3
SV=1
Length = 372
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 189
>sp|Q48NL1|PROB_PSE14 Glutamate 5-kinase OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=proB PE=3 SV=1
Length = 368
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 136 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 185
>sp|Q7N7B2|PROB_PHOLL Glutamate 5-kinase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=proB PE=3 SV=1
Length = 368
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADTHP 242
N+ V E K+ N L+ A L ADK + D EG+ +A+ RNNP+A P
Sbjct: 137 NDAVATAEIKVGDNDNLSALAAILGGADKLLLLTDIEGLYTADPRNNPDAKLIP 190
>sp|Q31IT3|PROB_THICR Glutamate 5-kinase OS=Thiomicrospira crunogena (strain XCL-2)
GN=proB PE=3 SV=1
Length = 376
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKL-AADKAVTRQDAEGIASAEQRNNPNAD 239
N+TV DE + N LA TA L +AD V D G+ + R NPNA+
Sbjct: 143 NDTVVTDEIRFGDNDTLAALTANLVSADVLVILTDQNGLYNDNPRTNPNAE 193
>sp|A4XYL1|PROB_PSEMY Glutamate 5-kinase OS=Pseudomonas mendocina (strain ymp) GN=proB
PE=3 SV=1
Length = 372
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNAD 239
N+TV DE + N LA A L AD V D +G+ +A+ R+NP+A+
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMYTADPRHNPDAE 190
>sp|B1JF56|PROB_PSEPW Glutamate 5-kinase OS=Pseudomonas putida (strain W619) GN=proB PE=3
SV=1
Length = 372
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 189
>sp|Q4ZYK0|PROB_PSEU2 Glutamate 5-kinase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=proB PE=3 SV=1
Length = 372
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 189
>sp|Q88Q07|PROB_PSEPK Glutamate 5-kinase OS=Pseudomonas putida (strain KT2440) GN=proB
PE=3 SV=1
Length = 372
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 189
>sp|A5VYC7|PROB_PSEP1 Glutamate 5-kinase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=proB PE=3 SV=1
Length = 372
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 189
>sp|Q1IF12|PROB_PSEE4 Glutamate 5-kinase OS=Pseudomonas entomophila (strain L48) GN=proB
PE=3 SV=1
Length = 372
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ RNNP A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRNNPEA 189
>sp|A9BP67|PROB_DELAS Glutamate 5-kinase OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=proB PE=3 SV=1
Length = 382
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE K N L A L AD V D G+ SA+ R+NP+A
Sbjct: 148 NDTVVNDEIKFGDNDTLGALVANLIEADALVILTDQRGLYSADPRSNPDA 197
>sp|Q67J65|MURA3_SYMTH UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=murA3 PE=3 SV=1
Length = 424
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 136 ITIGEALETTAQTAGDKPVDQSDAAAIQAAEVRATGSTVTTPGLAASAQSAAAHNETVDR 195
+ +G + +TA K V+Q A ++A ++RA G+ + GLAA ++ E V R
Sbjct: 340 VRMGAQIRVEGRTAIVKGVEQLYGAPVEATDIRA-GAALVIAGLAAEGETTIYGMEHVQR 398
Query: 196 DEDKIKLNQVLAGATAKLAADKAVTRQDA 224
+K++ ++LA L AD + RQ A
Sbjct: 399 GYEKLE-QKLLA-----LGADVQMERQGA 421
>sp|Q747Q3|PROB_GEOSL Glutamate 5-kinase OS=Geobacter sulfurreducens (strain ATCC 51573 /
DSM 12127 / PCA) GN=proB PE=3 SV=1
Length = 373
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 17/161 (10%)
Query: 93 VTETDVPGRRIITESVGGQVVGRHEEPTPVSLAPTTGRVEQGAITIGEALETTAQTAGDK 152
V E GR++I S G GR E + P + +Q A IG++ A +
Sbjct: 40 VAELRASGRQVIIVSSGAVAAGRKE--LGIDGRPRSIPQKQAAAAIGQSRLMHAYEEAFE 97
Query: 153 PVDQSDAAAI----------QAAEVRATGSTVTTPGLAASAQSAAAHNETVDRDEDKIKL 202
P A + + RAT T+ + G+ N+TV DE K
Sbjct: 98 PFGHKVAQILLTRDDLAHRGRFLNARATLDTLLSFGVIPIINE----NDTVVFDEIKFGD 153
Query: 203 NQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADTHP 242
N L+ LA A+ V D +G A R NP+A P
Sbjct: 154 NDSLSALVTNLAEANLLVILTDIDGFYEANPRTNPDARLIP 194
>sp|Q3K6L0|PROB_PSEPF Glutamate 5-kinase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=proB PE=3 SV=2
Length = 372
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A L AD V D +G+ A+ R+NP+A
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRSNPDA 189
>sp|Q89X86|PROB_BRAJA Glutamate 5-kinase OS=Bradyrhizobium japonicum (strain USDA 110)
GN=proB PE=3 SV=1
Length = 373
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADTHP 242
N+TV E + N LA A +A AD V D +G+ A +NNPNA P
Sbjct: 142 NDTVATTEIRYGDNDRLAARVATMASADLLVLLSDIDGLYDAPPKNNPNAKLIP 195
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 31.2 bits (69), Expect = 7.9, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 91 VTVTETDVPGRRIITESVGGQVVGRHEEPTPVSLAPTTGRVEQGA-----ITIGEALETT 145
V+ T++DV IT S+ + + P P S+ P TG + A T G L T
Sbjct: 919 VSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVT 978
Query: 146 AQTAGDKPVDQSDAAAIQAAEVRATGSTVTTPGLAAS 182
A+ G+ + + I +V +P AS
Sbjct: 979 AKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQAS 1015
>sp|Q1QA44|PROB_PSYCK Glutamate 5-kinase OS=Psychrobacter cryohalolentis (strain K5)
GN=proB PE=3 SV=1
Length = 390
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVL-AGATAKLAADKAVTRQDAEGIASAEQRNNPNA 238
N+T+ DE K N L A A A + AD + D EG+ + RNNP+A
Sbjct: 155 NDTITIDEIKFGDNDTLGAMAAAMVNADLYIILTDQEGVFTDNPRNNPHA 204
>sp|Q6F9D9|PROB_ACIAD Glutamate 5-kinase OS=Acinetobacter sp. (strain ADP1) GN=proB PE=3
SV=1
Length = 377
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVLAGATA-KLAADKAVTRQDAEGIASAEQRNNPNA 238
N+TV DE + N LA A ++ AD + D +G+ ++ R+NPNA
Sbjct: 146 NDTVSTDEIRFGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRSNPNA 195
>sp|A4VI55|PROB_PSEU5 Glutamate 5-kinase OS=Pseudomonas stutzeri (strain A1501) GN=proB
PE=3 SV=1
Length = 372
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADT 240
N+TV DE + N LA A L AD V D +G+ A+ R+NP A+
Sbjct: 140 NDTVVTDEIRFGDNDTLAALVANLVEADLLVILTDRDGMFDADPRHNPEANL 191
>sp|Q4FRK7|PROB_PSYA2 Glutamate 5-kinase OS=Psychrobacter arcticus (strain DSM 17307 /
273-4) GN=proB PE=3 SV=1
Length = 390
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 190 NETVDRDEDKIKLNQVL-AGATAKLAADKAVTRQDAEGIASAEQRNNPNA 238
N+T+ DE K N L A A A + AD + D EG+ + R+NPNA
Sbjct: 155 NDTITIDEIKFGDNDTLGAMAAAMVNADLYIILTDQEGVFTDNPRDNPNA 204
>sp|Q9ABB6|PROB_CAUCR Glutamate 5-kinase OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=proB PE=3 SV=1
Length = 377
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 189 HNETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADTHP 242
N+TV +E + N LA A++A AD V D +G+ +A+ R NP A P
Sbjct: 144 ENDTVVTEEIRYGDNDRLAARVAQMAGADLLVLLSDIDGLYTADPRKNPKAQHIP 198
>sp|B8GYI6|PROB_CAUCN Glutamate 5-kinase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=proB PE=3 SV=1
Length = 377
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 189 HNETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADTHP 242
N+TV +E + N LA A++A AD V D +G+ +A+ R NP A P
Sbjct: 144 ENDTVVTEEIRYGDNDRLAARVAQMAGADLLVLLSDIDGLYTADPRKNPKAQHIP 198
>sp|B2VHM7|PROB_ERWT9 Glutamate 5-kinase OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=proB PE=3 SV=1
Length = 367
Score = 30.8 bits (68), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNADT 240
N+ V E K+ N L+ A LA ADK + D +G+ +A+ RNNP A+
Sbjct: 136 NDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRNNPQAEL 187
>sp|P17856|PROB_SERMA Glutamate 5-kinase OS=Serratia marcescens GN=proB PE=3 SV=1
Length = 367
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNAD 239
N+ V E K+ N L+ A LA ADK + D +G+ +A+ RNNP A+
Sbjct: 136 NDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLYTADPRNNPQAE 186
>sp|A8GAD3|PROB_SERP5 Glutamate 5-kinase OS=Serratia proteamaculans (strain 568) GN=proB
PE=3 SV=1
Length = 367
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 190 NETVDRDEDKIKLNQVLAGATAKLA-ADKAVTRQDAEGIASAEQRNNPNAD 239
N+ V E K+ N L+ A LA ADK + D +G+ +A+ RNNP A+
Sbjct: 136 NDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLYTADPRNNPQAE 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.123 0.332
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,407,754
Number of Sequences: 539616
Number of extensions: 3677763
Number of successful extensions: 11654
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 11525
Number of HSP's gapped (non-prelim): 327
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)