BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038384
(283 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296089901|emb|CBI39720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 120/173 (69%), Gaps = 35/173 (20%)
Query: 2 YIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCD 57
YIL ++VF RLAND++C +NRCIVITGRGYPDI TRRFLRLL+EKL L +CLVDCD
Sbjct: 238 YILVVEKESVFQRLANDKFCNKNRCIVITGRGYPDIPTRRFLRLLVEKLHLHVYCLVDCD 297
Query: 58 PYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE----- 112
PYGFDILTTYRFGSMQMAYDAKFLR+PE+ WLGAFPSD EKYGLP+ C L LT E
Sbjct: 298 PYGFDILTTYRFGSMQMAYDAKFLRVPEIEWLGAFPSDSEKYGLPEPCLLPLTAEDKRKT 357
Query: 113 --------------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA S SFLSE YIPSKIQ
Sbjct: 358 EAILHRCYLQQELLHWRLELELMLQRGVKFEIEALSVHSLSFLSENYIPSKIQ 410
>gi|224061220|ref|XP_002300376.1| predicted protein [Populus trichocarpa]
gi|222847634|gb|EEE85181.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 117/165 (70%), Gaps = 31/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLAND++C NRCIVITGRGYPDI TRRFLRLL+EKL LP +CLVDCDPYGFDIL
Sbjct: 188 ESVFQRLANDKFCNANRCIVITGRGYPDIPTRRFLRLLVEKLCLPVYCLVDCDPYGFDIL 247
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSMQMAYDAK LR+PE+ WLGAFPSDFEKY LP+ C L LT E
Sbjct: 248 TTYRFGSMQMAYDAKILRVPEVQWLGAFPSDFEKYDLPQQCLLPLTAEDKRRTETMLLRC 307
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
GVKFEIEAF + SFLSE+YIPSKI
Sbjct: 308 YLQKEVPEWRLELELMLQKGVKFEIEAFSVHTLSFLSEQYIPSKI 352
>gi|225461890|ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
vinifera]
Length = 361
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 117/166 (70%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLAND++C +NRCIVITGRGYPDI TRRFLRLL+EKL L +CLVDCDPYGFDIL
Sbjct: 191 ESVFQRLANDKFCNKNRCIVITGRGYPDIPTRRFLRLLVEKLHLHVYCLVDCDPYGFDIL 250
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSMQMAYDAKFLR+PE+ WLGAFPSD EKYGLP+ C L LT E
Sbjct: 251 TTYRFGSMQMAYDAKFLRVPEIEWLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRC 310
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA S SFLSE YIPSKIQ
Sbjct: 311 YLQQELLHWRLELELMLQRGVKFEIEALSVHSLSFLSENYIPSKIQ 356
>gi|449470576|ref|XP_004152992.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 187
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 121/172 (70%), Gaps = 31/172 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLAND++C+RNRCIVITGRGYPD+ +RRFLRLL++ L LP FCLVDCDPYGFDIL
Sbjct: 14 ESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVLALPAFCLVDCDPYGFDIL 73
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSMQMAYDAK+L+IP++ WLGAF SDFEKY LP+ C + LT +
Sbjct: 74 TTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKDKSRTEALLQRC 133
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQGVYSVV 145
GVKFEIEA + SFLS++Y+PSKI+ +++
Sbjct: 134 YLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKIESELTLL 185
>gi|356499439|ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
Length = 367
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 112/167 (67%), Gaps = 31/167 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLANDQ+C N CIVITGRGYPDI TRRFLRLL+E L LP +CLVDCDPYGFDIL
Sbjct: 197 ESVFQRLANDQFCNANHCIVITGRGYPDIPTRRFLRLLVENLCLPAYCLVDCDPYGFDIL 256
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSMQMAYD K LR+PE+ WLGAFPSD E+Y +P C L LT E
Sbjct: 257 TTYRFGSMQMAYDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTAEDKRKVEAMLLRC 316
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
GVKFEIEA + SFLSE YIPSKI+G
Sbjct: 317 YLEREVPQWRLELQLILQRGVKFEIEALSVHALSFLSESYIPSKIEG 363
>gi|449464882|ref|XP_004150158.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 121/172 (70%), Gaps = 31/172 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLAND++C+RNRCIVITGRGYPD+ +RRFLRLL++ L LP FCLVDCDPYGFDIL
Sbjct: 31 ESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVLALPAFCLVDCDPYGFDIL 90
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSMQMAYDAK+L+IP++ WLGAF SDFEKY LP+ C + LT +
Sbjct: 91 TTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKDKSRTEALLQRC 150
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQGVYSVV 145
GVKFEIEA + SFLS++Y+PSKI+ +++
Sbjct: 151 YLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKIESELTLL 202
>gi|449470533|ref|XP_004152971.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 120/172 (69%), Gaps = 31/172 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLAND++C+RNRCIVITGRGYPD+ +RRFLRLL++ LP FCLVDCDPYGFDIL
Sbjct: 31 ESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVSALPAFCLVDCDPYGFDIL 90
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSMQMAYDAK+L+IP++ WLGAF SDFEKY LP+ C + LT +
Sbjct: 91 TTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKDKSRTEALLQRC 150
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQGVYSVV 145
GVKFEIEA + SFLS++Y+PSKI+ +++
Sbjct: 151 YLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKIESELTLL 202
>gi|297722559|ref|NP_001173643.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|31712057|gb|AAP68363.1| putative topoisomerase 6 [Oryza sativa Japonica Group]
gi|40539002|gb|AAR87259.1| putative DNA topoisomerase (with alternative splicing) [Oryza
sativa Japonica Group]
gi|53127614|emb|CAD71263.1| putative topoisomerase VI subunit A [Oryza sativa Indica Group]
gi|108711121|gb|ABF98916.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|150371041|dbj|BAF65344.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|218193764|gb|EEC76191.1| hypothetical protein OsI_13532 [Oryza sativa Indica Group]
gi|222625809|gb|EEE59941.1| hypothetical protein OsJ_12593 [Oryza sativa Japonica Group]
gi|255674904|dbj|BAH92371.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|269859219|gb|ACZ52153.1| topoisomerase 6 subunit A-like protein [Oryza sativa Japonica
Group]
Length = 381
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 111/166 (66%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVITGRGYPDI TRRFLR L+E+L LP +CLVD DPYGFDIL
Sbjct: 211 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRFLRYLVEQLHLPVYCLVDADPYGFDIL 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TY+FGS+Q+AYDA FLR+P++ WLG F SDFE Y LP C L L+ E
Sbjct: 271 ATYKFGSLQLAYDANFLRVPDIRWLGVFTSDFEDYRLPDCCLLHLSSEDRRKAEGILSRC 330
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA ACS SFLSE+YIP KI+
Sbjct: 331 YLHREAPQWRLELEAMLQKGVKFEIEALSACSISFLSEEYIPKKIK 376
>gi|13383478|gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 109/166 (65%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C NRCIVITGRGYPD+STRRFLRLL+EKL LP CLVDCDPYGF+IL
Sbjct: 191 ETVFQRLANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEIL 250
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TYRFGSMQMAYD + LR P+M WLGAFPSD E Y +PK C L LT E
Sbjct: 251 ATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRC 310
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA S SFLSE YIPSKI+
Sbjct: 311 YLKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEIYIPSKIR 356
>gi|15231162|ref|NP_187923.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
gi|75335900|sp|Q9M4A2.1|SPO11_ARATH RecName: Full=Meiotic recombination protein SPO11-1;
Short=AtSPO11-1
gi|7270975|emb|CAB81544.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|114050705|gb|ABI49502.1| At3g13170 [Arabidopsis thaliana]
gi|332641783|gb|AEE75304.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 109/166 (65%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C NRCIVITGRGYPD+STRRFLRLL+EKL LP CLVDCDPYGF+IL
Sbjct: 191 ETVFQRLANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEIL 250
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TYRFGSMQMAYD + LR P+M WLGAFPSD E Y +PK C L LT E
Sbjct: 251 ATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRC 310
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA S SFLSE YIPSKI+
Sbjct: 311 YLKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIR 356
>gi|10172604|dbj|BAB01408.1| DNA topoisomerase VI, subunit A [Arabidopsis thaliana]
Length = 357
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 109/166 (65%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C NRCIVITGRGYPD+STRRFLRLL+EKL LP CLVDCDPYGF+IL
Sbjct: 186 ETVFQRLANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEIL 245
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TYRFGSMQMAYD + LR P+M WLGAFPSD E Y +PK C L LT E
Sbjct: 246 ATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRC 305
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA S SFLSE YIPSKI+
Sbjct: 306 YLKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIR 351
>gi|297834134|ref|XP_002884949.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330789|gb|EFH61208.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 109/166 (65%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C NRCIVITGRGYPD+STRRFLRLL+EKL LP CLVDCDPYGF+IL
Sbjct: 191 ETVFQRLANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEIL 250
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TYRFGSMQMAYD + LR P+M WLGAFPSD E Y +PK C L LT E
Sbjct: 251 ATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSEIYSVPKQCLLPLTEEDKKRTEALLLRC 310
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA S SFLSE YIPSKI+
Sbjct: 311 YLKREMPRWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIR 356
>gi|357115345|ref|XP_003559449.1| PREDICTED: meiotic recombination protein SPO11-1-like [Brachypodium
distachyon]
Length = 383
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 109/166 (65%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVITGRGYPD+ TRRFLR L+E+L LP +CLVD DPYGFDIL
Sbjct: 213 ETVFQRLANDKFCERNRCIVITGRGYPDVPTRRFLRHLVEQLHLPAYCLVDSDPYGFDIL 272
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TY+FGSMQ+AYDA LR+P + WLG F SDFE+Y LP C L L+ E
Sbjct: 273 ATYKFGSMQLAYDANLLRVPGIRWLGVFTSDFEEYCLPDYCLLDLSSEDRKKLEGILTRC 332
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
GVKFEIEA A S SFLS++YIP KI+
Sbjct: 333 YLHREAPEWRAELEAMLEKGVKFEIEALSASSISFLSQEYIPQKIK 378
>gi|255563518|ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223537999|gb|EEF39612.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 373
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 117/179 (65%), Gaps = 43/179 (24%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLAND +C +RCIVITGRGYPDI TRRFLRLL+EKL LP +CLVDCDPYGFDIL
Sbjct: 191 ESVFQRLANDWFCNAHRCIVITGRGYPDIPTRRFLRLLLEKLGLPVYCLVDCDPYGFDIL 250
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TTYRFGSM MAYDAKFLR+PE+ WLGAFPSD EKYGLP++C L LT E
Sbjct: 251 TTYRFGSMLMAYDAKFLRVPEIRWLGAFPSDLEKYGLPQHCLLPLTDEDRRRTETMLLRC 310
Query: 113 -------------------------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
GVKFEIEA S SFLSE YIPSKIQG
Sbjct: 311 YLQREAPEWSYIMKWYYLFHERLELESMLQRGVKFEIEALSVHSLSFLSELYIPSKIQG 369
>gi|242038091|ref|XP_002466440.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
gi|241920294|gb|EER93438.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
Length = 383
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 113/170 (66%), Gaps = 32/170 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVITGRGYPDI TRRFLR L+E+L LP +CLVD DPYGFDIL
Sbjct: 213 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRFLRYLVEQLHLPAYCLVDSDPYGFDIL 272
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TY+FGS+Q+A+DA LR+P++ WLG F SDFE+Y LP C L L+ E
Sbjct: 273 ATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLHLSPEDRRKAERILARC 332
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
GVKFEIEA A S SFLS++YIP KI QG++
Sbjct: 333 YLHREVPEWRSELEAMLQKGVKFEIEALSANSISFLSDEYIPQKIKQGMH 382
>gi|357494931|ref|XP_003617754.1| Meiotic recombination protein SPO11 [Medicago truncatula]
gi|355519089|gb|AET00713.1| Meiotic recombination protein SPO11 [Medicago truncatula]
Length = 452
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 113/207 (54%), Gaps = 71/207 (34%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
++VF RLANDQ+C N CIVI+GRGYPDI TRRFLRLL+E L +P +CLVDCDPYGFDIL
Sbjct: 242 ESVFQRLANDQFCKSNHCIVISGRGYPDIPTRRFLRLLVENLHIPAYCLVDCDPYGFDIL 301
Query: 65 TTYRFGSM----------------------------------------QMAYDAKFLRIP 84
TTYRFGSM QMAYD K LR+P
Sbjct: 302 TTYRFGSMVSICKFISSEVLQHAYLLLQGSQHEVYMIVEWIKSLSNDRQMAYDTKHLRVP 361
Query: 85 EMHWLGAFPSDFEKYGLPKNCRLKLTVE-------------------------------G 113
E+HWLGAFPSD E+Y +PK C L LT E G
Sbjct: 362 EIHWLGAFPSDSERYFVPKQCLLPLTAEDKRKIEAMLLRCYLQREVPQWRLELKMMLQKG 421
Query: 114 VKFEIEAFCACSFSFLSEKYIPSKIQG 140
VKFEIEA + SFL+E YIPSKI G
Sbjct: 422 VKFEIEALSVHTLSFLTESYIPSKIHG 448
>gi|195644000|gb|ACG41468.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 112/170 (65%), Gaps = 32/170 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVITGRGYPDI TRRFLR L+E L LP +CLVD DPYGFDIL
Sbjct: 213 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRFLRYLVELLHLPAYCLVDSDPYGFDIL 272
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TY+FGS+Q+A+DA LR+P++ WLG F SDFE+Y LP C L+L+ E
Sbjct: 273 ATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARC 332
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
GVKFEIEA A S SFLS +YIP KI QG++
Sbjct: 333 YLHREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMH 382
>gi|413933054|gb|AFW67605.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 112/170 (65%), Gaps = 32/170 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVITGRGYPDI TRRFLR L+E L LP +CLVD DPYGFDIL
Sbjct: 213 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRFLRYLVELLHLPAYCLVDSDPYGFDIL 272
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TY+FGS+Q+A+DA LR+P++ WLG F SDFE+Y LP C L+L+ E
Sbjct: 273 ATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARC 332
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
GVKFEIEA A S SFLS +YIP KI QG++
Sbjct: 333 YLHREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMH 382
>gi|413933051|gb|AFW67602.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 426
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 112/170 (65%), Gaps = 32/170 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVITGRGYPDI TRRFLR L+E L LP +CLVD DPYGFDIL
Sbjct: 256 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRFLRYLVELLHLPAYCLVDSDPYGFDIL 315
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TY+FGS+Q+A+DA LR+P++ WLG F SDFE+Y LP C L+L+ E
Sbjct: 316 ATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARC 375
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
GVKFEIEA A S SFLS +YIP KI QG++
Sbjct: 376 YLHREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMH 425
>gi|357494925|ref|XP_003617751.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
gi|355519086|gb|AET00710.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
Length = 439
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 112/214 (52%), Gaps = 78/214 (36%)
Query: 5 DAVFHRLANDQYCTRNRCIVIT------------------------GRGYPDISTRR--- 37
++VF LAND +C N CIVI+ GRGYPDI TRR
Sbjct: 222 ESVFRILANDHFCNANHCIVISVSNFMKTLASFDSILLCINSIFSKGRGYPDIPTRRCEK 281
Query: 38 --------------------FLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYD 77
FLRLL++ L +P +CLVDCDPYGFDILTTYRFGSMQMAYD
Sbjct: 282 SRPLSLDIMLPILCILYFNRFLRLLVDNLYIPAYCLVDCDPYGFDILTTYRFGSMQMAYD 341
Query: 78 AKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------------------- 112
K LR+PE+HWLGAFPSD ++Y +PK C L LTVE
Sbjct: 342 TKHLRVPEIHWLGAFPSDSDRYFVPKQCLLPLTVEDKRKIKAMLLRCYLQREVPEWRLEL 401
Query: 113 ------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
GVKFEIEA + SFL+E YIPSKI G
Sbjct: 402 RMMLQKGVKFEIEALSVHTLSFLTESYIPSKIHG 435
>gi|168003862|ref|XP_001754631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694252|gb|EDQ80601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 292
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 101/167 (60%), Gaps = 31/167 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C +N CI++TG+GYPD++TR FLR L+++L LP + L+D DPYG DIL
Sbjct: 122 ETVFQRLANDKFCAKNCCILLTGKGYPDVATRSFLRRLVDQLHLPVYGLMDGDPYGLDIL 181
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT-------------- 110
+ YRFGS+ MAYDAK L +P + WLG F SD +GL +NC L ++
Sbjct: 182 SIYRFGSLTMAYDAKVLAVPSILWLGIFLSDLGHFGLTENCLLPMSKRDEKKADAILNKS 241
Query: 111 -----------------VEGVKFEIEAFCACSFSFLSEKYIPSKIQG 140
VK E+EA SF+ L++ YIPSKI+G
Sbjct: 242 YIQQLAPAWWSKLAEFRTRRVKLEVEAISTVSFTSLADHYIPSKIRG 288
>gi|302800231|ref|XP_002981873.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
gi|300150315|gb|EFJ16966.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
Length = 284
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 98/167 (58%), Gaps = 31/167 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C +N CIV+TGRGYPD++TR FLRLL + LP + LVD DPYG DIL
Sbjct: 113 ETVFQRLANDGFCRKNNCIVLTGRGYPDVATRSFLRLLAAETNLPVYGLVDADPYGLDIL 172
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC------------------- 105
TYRFGS+ MAYDA+ L P + WLG F SD + + +P C
Sbjct: 173 ATYRFGSLTMAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLPLTNDDRRKAEAMLNRD 232
Query: 106 -----------RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
+L+L +E GVK E+EA A FS L++ YIP KI+
Sbjct: 233 YLEHLAFSWNQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKA 279
>gi|302808592|ref|XP_002985990.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
gi|300146138|gb|EFJ12809.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
Length = 278
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 96/167 (57%), Gaps = 31/167 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C +N CIV+TGRGYPD++TR FLRLL + +LP + LVD DPYG DIL
Sbjct: 107 ETVFQRLANDGFCRKNNCIVLTGRGYPDVATRSFLRLLAAETKLPVYGLVDADPYGLDIL 166
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TYRFGS MAYDA+ L P + WLG F SD + + +P C L LT +
Sbjct: 167 ATYRFGSPTMAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLSLTNDDRRKAEAMLNRD 226
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
GVK E+EA A FS L++ YIP KI+
Sbjct: 227 YLKHLAFSWNQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKA 273
>gi|302808746|ref|XP_002986067.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
gi|300146215|gb|EFJ12886.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
Length = 278
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 95/167 (56%), Gaps = 31/167 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND +C +N CIV+TGRGYPD++TR FLRLL + LP + LVD DPYG DIL
Sbjct: 107 ETVFQRLANDGFCRKNNCIVLTGRGYPDVATRSFLRLLAAETNLPVYGLVDADPYGLDIL 166
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
TYRFGS MAYDA+ L P + WLG F SD + + +P C L LT +
Sbjct: 167 ATYRFGSPTMAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLSLTNDDRRKAEAMLNRD 226
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
GVK E+EA A FS L++ YIP KI+
Sbjct: 227 YLKHLAFSWNQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKA 273
>gi|307106398|gb|EFN54644.1| hypothetical protein CHLNCDRAFT_31596 [Chlorella variabilis]
Length = 416
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 95/173 (54%), Gaps = 34/173 (19%)
Query: 1 MYIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDC 56
M+IL DA F RLA D++ CI+IT +G PD++TR FLR L + LR+P LVD
Sbjct: 239 MFILLVEKDAAFMRLAEDRFYNTYPCIIITAKGQPDVATRLFLRKLKQVLRIPVLALVDS 298
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG--- 113
DPYG IL+ Y GSM M+YD+ L P++ WLG PSD +++ +P+ CRL +T E
Sbjct: 299 DPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFSIPQQCRLPMTDEDIKT 358
Query: 114 ---------------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI+A + F +LS++Y+P K+Q
Sbjct: 359 GKKLLEEDFVKANPEWVKELEIMVTTKVKAEIQALSSFGFQYLSQQYLPLKLQ 411
>gi|449018621|dbj|BAM82023.1| DNA topoisomerase VI subunit A [Cyanidioschyzon merolae strain 10D]
Length = 433
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R +CI++T +G PD+ TR FLR L +L LP LVD DPYG IL
Sbjct: 264 DAAFMRLAEDRFYNRVKCIIVTAKGQPDVGTRLFLRRLKRELHLPILGLVDSDPYGLKIL 323
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG P+D ++YG+P+ CRL +T +K
Sbjct: 324 SVYMSGSKGMSYDSANLATPDIKWLGIRPTDLDRYGIPEQCRLAMTENDLKTGKDMLEED 383
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A F +L+E Y+P KI+
Sbjct: 384 FIKKNPAWHRELSLMVKRKEKAEIQALSNFGFQYLTEVYLPEKIR 428
>gi|384248976|gb|EIE22459.1| topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 418
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ CI++T +G PD+++R FLR L + LR+P LVD DPYG IL
Sbjct: 249 DAAFMRLAEDRFYNTYPCIILTAKGQPDVASRLFLRKLRDTLRIPVLALVDSDPYGLKIL 308
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG----------- 113
+ Y GSM M+YD+ L P++ WLG PSD +++ +P+ CRL +T E
Sbjct: 309 SVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFNIPQQCRLPMTDEDIRTGKRLLEED 368
Query: 114 -------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI+A + F +LS+ Y+P K+Q
Sbjct: 369 FIQANAEWVKELEIMIASKVKAEIQALSSFGFQYLSQVYLPLKLQ 413
>gi|356548204|ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 417
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD+STR FLR + +L+LP LVD DPYG IL
Sbjct: 248 DAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFLRKMKTELKLPVLALVDSDPYGLKIL 307
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 308 SVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 367
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A F +LSE Y+P K+Q
Sbjct: 368 FVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQ 412
>gi|15241959|ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|297806215|ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A;
AltName: Full=Meiotic recombination protein SPO11-3;
Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
gi|15488539|gb|AAL01152.1|AF323679_1 putative topoisomerase VI subunit A [Arabidopsis thaliana]
gi|7413557|emb|CAB86036.1| meiosis specific-like protein [Arabidopsis thaliana]
gi|12331186|emb|CAC24689.1| topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis thaliana]
gi|297316828|gb|EFH47250.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|332003139|gb|AED90522.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
Length = 427
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 34/173 (19%)
Query: 1 MYIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDC 56
M+IL DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD
Sbjct: 250 MFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 309
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF 116
DPYG IL+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 310 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 369
Query: 117 ------------------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 370 GKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 422
>gi|125543392|gb|EAY89531.1| hypothetical protein OsI_11065 [Oryza sativa Indica Group]
Length = 830
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 661 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 720
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 721 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 780
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 781 FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQ 825
>gi|27476077|gb|AAO17008.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108707550|gb|ABF95345.1| DNA topoisomerase VIA, putative, expressed [Oryza sativa Japonica
Group]
Length = 830
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 661 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 720
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 721 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 780
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 781 FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQ 825
>gi|224069320|ref|XP_002326329.1| predicted protein [Populus trichocarpa]
gi|222833522|gb|EEE71999.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD DPYG IL
Sbjct: 254 DAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDSDPYGLKIL 313
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 314 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 373
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 374 FVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 418
>gi|125585844|gb|EAZ26508.1| hypothetical protein OsJ_10402 [Oryza sativa Japonica Group]
Length = 526
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 357 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 416
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 417 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 476
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 477 FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQ 521
>gi|412989091|emb|CCO15682.1| predicted protein [Bathycoccus prasinos]
Length = 424
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ + CI+IT +G PD++TR FL + +L+LP LVD DPYG I+
Sbjct: 255 DAAFMRLAEDRFYNKYPCIIITAKGQPDVATRLFLSKVKRELKLPVLALVDADPYGLKII 314
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y GS MA+D+ L P++ WLG PSD +K+ +P+ CRL++T + +
Sbjct: 315 SVYMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPEQCRLEMTAKDIETGNHMLKED 374
Query: 115 --------------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A + F +LSE Y+P K+Q
Sbjct: 375 FIQQNPDWVKEVEIMLKTKTKAEIQALSSYGFQYLSEVYLPLKLQ 419
>gi|297600747|ref|NP_001049765.2| Os03g0284800 [Oryza sativa Japonica Group]
gi|150371045|dbj|BAF65346.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|255674417|dbj|BAF11679.2| Os03g0284800 [Oryza sativa Japonica Group]
Length = 442
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 273 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 332
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 333 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 392
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 393 FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQ 437
>gi|356537457|ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 419
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD+STR FLR + +L+LP LVD DPYG IL
Sbjct: 250 DAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFLRKMKIELKLPVLALVDSDPYGLKIL 309
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 310 SVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 369
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A F +LSE Y+P K+Q
Sbjct: 370 FVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQ 414
>gi|297741485|emb|CBI32617.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD DPYG IL
Sbjct: 294 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDSDPYGLKIL 353
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 354 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKTGKDLLEED 413
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 414 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 458
>gi|242041321|ref|XP_002468055.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
gi|241921909|gb|EER95053.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
Length = 436
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 267 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 326
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 327 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 386
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 387 FVKQNEGWVKELEMMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQ 431
>gi|226497286|ref|NP_001141583.1| uncharacterized protein LOC100273699 [Zea mays]
gi|194705154|gb|ACF86661.1| unknown [Zea mays]
gi|414866232|tpg|DAA44789.1| TPA: RHL2 [Zea mays]
Length = 436
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 267 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 326
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 327 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 386
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 387 FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQ 431
>gi|302807688|ref|XP_002985538.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
gi|300146744|gb|EFJ13412.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
Length = 415
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R C+++T +G PD++TR FLR + +LRLP LVD DPYG IL
Sbjct: 246 DAAFMRLAEDRFYNRFPCVIVTAKGQPDVATRLFLRKMKMELRLPVLGLVDSDPYGLKIL 305
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL ++ VK
Sbjct: 306 SVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQCRLPMSELDVKTGRDLLEED 365
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 366 FIKKDPRWYQELELMVKNKEKAEIQALSSFGFQYLSEVYLPMKLQ 410
>gi|255568446|ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223535494|gb|EEF37163.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 421
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD DPYG IL
Sbjct: 252 DAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 311
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 312 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 371
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 372 FVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 416
>gi|225439757|ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
Length = 420
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD DPYG IL
Sbjct: 251 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDSDPYGLKIL 310
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 311 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKTGKDLLEED 370
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 371 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 415
>gi|195647934|gb|ACG43435.1| RHL2 [Zea mays]
Length = 436
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 267 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 326
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 327 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 386
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 387 FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQ 431
>gi|194697080|gb|ACF82624.1| unknown [Zea mays]
gi|414866233|tpg|DAA44790.1| TPA: hypothetical protein ZEAMMB73_994877 [Zea mays]
Length = 200
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 31 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 90
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 91 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 150
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 151 FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQ 195
>gi|302810679|ref|XP_002987030.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
gi|300145195|gb|EFJ11873.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
Length = 415
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R C+++T +G PD++TR FLR + +LRLP LVD DPYG IL
Sbjct: 246 DAAFMRLAEDRFYNRFPCVIVTAKGQPDVATRLFLRKMKMELRLPVLGLVDSDPYGLKIL 305
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL ++ VK
Sbjct: 306 SVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQCRLPMSELDVKTGRDLLEED 365
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 366 FIKKDPRWYQELELMVKNKEKAEIQALSSFGFQYLSEVYLPMKLQ 410
>gi|357120049|ref|XP_003561743.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Brachypodium
distachyon]
Length = 464
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 295 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 354
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T +K
Sbjct: 355 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDMKVGKEMLEED 414
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 415 FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQ 459
>gi|326521994|dbj|BAK04125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 272 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 331
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL ++ +K
Sbjct: 332 SVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMSDHDIKVGKEMLEED 391
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 392 FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQ 436
>gi|449448703|ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
gi|449521501|ref|XP_004167768.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
Length = 420
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD DPYG IL
Sbjct: 251 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 310
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 311 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 370
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 371 FVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 415
>gi|302831884|ref|XP_002947507.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
gi|300267371|gb|EFJ51555.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
Length = 412
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ CI++T +G PD++TR FL+ L L++P LVD DPYG IL
Sbjct: 243 DAAFMRLAEDRFYNTYPCIILTAKGQPDVATRLFLKRLKSTLKIPVLALVDSDPYGLKIL 302
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG----------- 113
+ Y GSM M+YD+ L P++ WLG PSD +++ +P+ CRL +T E
Sbjct: 303 SVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFNIPQQCRLPMTEEDIKTGRRLLEED 362
Query: 114 -------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI+A + F +L++ Y+P K+Q
Sbjct: 363 FIRANPEWVKELELMLATKVKAEIQALSSFGFQYLTQVYLPLKLQ 407
>gi|255070111|ref|XP_002507137.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
gi|226522412|gb|ACO68395.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
Length = 391
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI+IT +G PD++TR FL L LR+P LVD DPYG I+
Sbjct: 222 DAAFMRLAEDRFYNRFPCIIITAKGQPDVATRLFLSKLKRDLRIPVLALVDADPYGLKII 281
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y GS MA+D+ L P++ WLG PSD +K+ +P+ CRL+++ + +
Sbjct: 282 SVYMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPEQCRLEMSQKDIETGHHMLNED 341
Query: 115 --------------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A + F +LSE Y+P K+Q
Sbjct: 342 FIQQNPKWVREVKMMLASKTKAEIQALSSYGFQYLSEVYLPLKLQ 386
>gi|168022302|ref|XP_001763679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685172|gb|EDQ71569.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R C+++T +G PD++TR FL+ + L+LP LVD DPYG IL
Sbjct: 244 DAAFMRLAEDRFYNRFPCVILTAKGQPDVATRLFLKKMKTDLKLPVLGLVDSDPYGLKIL 303
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD KY +P+ CRL ++ + +K
Sbjct: 304 SVYMSGSKNMSYDSSNLTTPDIKWLGVRPSDLNKYKIPEQCRLPMSDQDIKTGKDMLEED 363
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +LSE Y+P K+Q
Sbjct: 364 FIKKDKNWVKELELMVKTKEKAEIQALSSFGFQYLSEVYLPLKLQ 408
>gi|298711265|emb|CBJ26510.1| DNA topoisomerase VI subunit A [Ectocarpus siliculosus]
Length = 639
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+A + R+A D++ + CIVIT +G PD++TR FL+ L +L +P LVD DPYG IL
Sbjct: 470 EAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKIL 529
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD ++Y +P+ CRL +T +K
Sbjct: 530 SVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQED 589
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI++ A F +L++ Y+P K+Q
Sbjct: 590 FIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTQNYLPQKLQ 634
>gi|53127616|emb|CAD79468.1| Topoisomerase VI subunit A [Oryza sativa Indica Group]
Length = 442
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R CI++T +G PD++TR FLR L +L+LP LVD DPYG IL
Sbjct: 273 DAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKIL 332
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ W G PSD +KY +P+ CRL +T +K
Sbjct: 333 SVYMCGSKNMSYDSANLTTPDIKWPGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEED 392
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +L+E Y+P K+Q
Sbjct: 393 FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQ 437
>gi|219111201|ref|XP_002177352.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217411887|gb|EEC51815.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 430
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+A + R+A D++ R CI+IT +G PD++TR FL + +L++P LVD DPYG IL
Sbjct: 261 EAAYMRMAEDRFYHRYPCIIITAKGQPDVATRMFLARITSELKIPVLGLVDSDPYGLKIL 320
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +KY LP+ CRL +T +K
Sbjct: 321 SVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYDLPEQCRLDMTENDIKTGKEMMKED 380
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +++E+Y+P K++
Sbjct: 381 FIQKNPEWMKELEIMVKTKKKAEIQALSSFGFQYVTEQYLPRKLK 425
>gi|159487423|ref|XP_001701722.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158280941|gb|EDP06697.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 414
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ CI++T +G PD++TR FL+ L L++P LVD DPYG IL
Sbjct: 244 DAAFMRLAEDRFYNTYPCIILTAKGQPDVATRLFLKKLKSSLKIPVLALVDSDPYGLKIL 303
Query: 65 TTYRF-GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ + GSM M+YD+ L P++ WLG PSD +++ +P+ CRL +T E
Sbjct: 304 SVFVLSGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFDIPQQCRLPMTEEDIKTGKRLLEE 363
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI+A + F +LS+ Y+P K+Q
Sbjct: 364 DWIKSNPEWVRELELMLASKVKAEIQALSSFGFQYLSQVYLPLKLQ 409
>gi|428170368|gb|EKX39294.1| Spo11-3/Rhl2/Bin5/Top6A3 vegetative topoisomerase VIA [Guillardia
theta CCMP2712]
Length = 385
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ C++ITG+G D++TR FLR + + L++P L D D +G IL
Sbjct: 216 DAAFQRLAEDRFYNTYPCVIITGKGEADLATRMFLRRVKDALKIPILGLFDSDAHGLKIL 275
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M++D+ L P++ WLG PSD +KY +P+ CRL+LT V F
Sbjct: 276 SVYMQGSEAMSHDSANLATPDIKWLGVRPSDLDKYNVPRECRLELTTHDVSFAESLKEKP 335
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+AF + F +L+++Y+P K++
Sbjct: 336 YIQKRSAWVKELETLLSRKEKAEIQAFTSKGFQYLTQEYLPRKLR 380
>gi|323455743|gb|EGB11611.1| hypothetical protein AURANDRAFT_52497 [Aureococcus anophagefferens]
Length = 407
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA ++RLA D++ + CI+ITG+G PD++TR FL L +L++P VD DPYG IL
Sbjct: 238 DAAYNRLAEDRFYNQFPCILITGKGQPDVATRMFLSRLKAELKIPVLAFVDSDPYGLKIL 297
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y GS M+YDA L P++ WLG PSD + Y LP CRL +T + +
Sbjct: 298 SVYMSGSKAMSYDANSLTTPDIKWLGLRPSDLDAYNLPDQCRLPMTPKDIEMGKQLLKED 357
Query: 115 --------------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A A F F+++ Y+P K++
Sbjct: 358 FVLKNKQWVKELERMLHTKQKAEIQALSAFGFQFVTQVYLPRKLR 402
>gi|145346380|ref|XP_001417667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577895|gb|ABO95960.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 30/164 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ + CI+IT +G PD++TR FL + L++P LVD DPYG I+
Sbjct: 170 DAAFMRLAEDRFYNKYPCIIITAKGQPDVATRLFLSKVKRDLKIPVLALVDADPYGLKII 229
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y GS MA+D+ L P++ WLG PSD +K+ +P+ CRL++T + +
Sbjct: 230 SVYMQGSKNMAFDSGNLTTPDIKWLGVRPSDLDKFKIPEQCRLEMTAKDIETGHHMLNED 289
Query: 115 --------------------KFEIEAFCACSFSFLSEKYIPSKI 138
K EI++ + F +LSE Y+P K+
Sbjct: 290 FIKSNPEWVKEINIMLETKTKAEIQSLSSYGFQYLSEVYLPLKL 333
>gi|345292731|gb|AEN82857.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292733|gb|AEN82858.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292735|gb|AEN82859.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292737|gb|AEN82860.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292739|gb|AEN82861.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292741|gb|AEN82862.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292743|gb|AEN82863.1| AT5G02820-like protein, partial [Capsella rubella]
Length = 202
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
Query: 1 MYIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDC 56
M+IL DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD
Sbjct: 49 MFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 108
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
DPYG IL+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 109 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 167
>gi|295830615|gb|ADG38976.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830617|gb|ADG38977.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830621|gb|ADG38979.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830623|gb|ADG38980.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830625|gb|ADG38981.1| AT5G02820-like protein [Neslia paniculata]
Length = 199
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
Query: 1 MYIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDC 56
M+IL DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD
Sbjct: 51 MFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 110
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
DPYG IL+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 111 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 169
>gi|224011048|ref|XP_002294481.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220969976|gb|EED88315.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+A + R+A D++ R CIVIT +G PD++TR FL + +L++P LVD DPYG IL
Sbjct: 183 EAAYMRMAEDRFYQRYPCIVITAKGQPDVATRMFLSRITSELQIPVLALVDSDPYGLKIL 242
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF-------- 116
+ Y GS M+YD+ L P++ WLG PSD +Y LP CRL +T +K
Sbjct: 243 SVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLNRYDLPDQCRLNMTENDIKTGKELLQEA 302
Query: 117 ----------------------EIEAFCACSFSFLSEKYIPSKIQ 139
EI+A + F +++E Y+P K++
Sbjct: 303 FIMKNPKWMKELQIMVKTKQKAEIQALSSFGFQYITEVYLPRKLK 347
>gi|295830619|gb|ADG38978.1| AT5G02820-like protein [Capsella grandiflora]
Length = 199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 74/111 (66%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FLR + +L+LP LVD DPYG IL
Sbjct: 59 DAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 118
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T + +K
Sbjct: 119 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 169
>gi|308803671|ref|XP_003079148.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
gi|116057603|emb|CAL53806.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
Length = 422
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 30/164 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ + CI+IT +G PD++TR FL + L++P LVD DPYG I+
Sbjct: 253 DAAFMRLAEDRFYNKYPCIIITAKGQPDVATRLFLSKVKRDLKIPVLALVDADPYGLKII 312
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y GS MA+D+ L P++ WLG PSD +K+ +P+ CRL ++ + +
Sbjct: 313 SVYMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPEQCRLDMSAKDIETGQHMLNED 372
Query: 115 --------------------KFEIEAFCACSFSFLSEKYIPSKI 138
K EI+A A F +L++ Y+P K+
Sbjct: 373 FVKQNPEWVKEINIMLETKTKAEIQALSAYGFQYLTKVYLPLKL 416
>gi|6755624|ref|NP_036176.1| meiotic recombination protein SPO11 isoform a [Mus musculus]
gi|30179896|sp|Q9WTK8.2|SPO11_MOUSE RecName: Full=Meiotic recombination protein SPO11
gi|5815133|gb|AAD52563.1|AF169386_1 SPO11 [Mus musculus]
gi|9367101|gb|AAF87096.1|AF173848_1 SPO11 protein [Mus musculus]
gi|162318682|gb|AAI56814.1| Sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) [synthetic construct]
Length = 396
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 226 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 391
>gi|320170822|gb|EFW47721.1| meiotic recombination protein SPO11 [Capsaspora owczarzaki ATCC
30864]
Length = 673
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 34/169 (20%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
+AVFHRL ND+ CIVITG GYPDI TR F+ L E LP + LVDCDP+GFDI
Sbjct: 499 EAVFHRLLNDRVFDHIGDCIVITGIGYPDIQTRSFVHRLAEMCGLPMYALVDCDPHGFDI 558
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL--------KLT----- 110
L Y++GS +A+D++ L +P + WLG PSD +K+ + + L KLT
Sbjct: 559 LCNYKYGSRALAFDSENLTVPSLRWLGLLPSDIDKFNIQEANWLAFNQYDTGKLTSLLNA 618
Query: 111 -------------------VEGVKFEIEAF-CACSFSFLSEKYIPSKIQ 139
G+K E++A +FL+ +++P K+Q
Sbjct: 619 PFLTLPDLHLWREELELMQARGIKCELQALNVDGDLTFLTGRFLPHKLQ 667
>gi|148674664|gb|EDL06611.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_a [Mus musculus]
Length = 353
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 183 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 242
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 243 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 302
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 303 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 348
>gi|145312272|ref|NP_001077428.1| meiotic recombination protein SPO11 isoform c [Mus musculus]
gi|5733397|gb|AAD49561.1|AF126400_1 SPO11 protein [Mus musculus]
gi|9367040|gb|AAF87094.1|AF167439_1 SPO11b [Mus musculus]
Length = 371
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 201 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 260
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 261 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 320
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 321 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 366
>gi|5453474|gb|AAD43589.1|AF163054_1 meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
gi|5453483|gb|AAD43592.1| meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
Length = 354
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 184 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 243
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 244 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 303
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 304 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 349
>gi|145312248|ref|NP_001077429.1| meiotic recombination protein SPO11 isoform b [Mus musculus]
gi|5453472|gb|AAD43588.1|AF163053_1 meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
gi|5532652|gb|AAD44811.1|AF149309_1 Spo11 homolog [Mus musculus]
gi|9367033|gb|AAF87090.1|AF165313_1 SPO11 [Mus musculus]
gi|5453482|gb|AAD43591.1| meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
Length = 358
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 188 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 353
>gi|148674668|gb|EDL06615.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_e [Mus musculus]
Length = 327
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 157 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 216
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 217 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 276
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 277 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 322
>gi|148674666|gb|EDL06613.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_c [Mus musculus]
Length = 306
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 136 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 195
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 196 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 255
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 256 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 301
>gi|148674665|gb|EDL06612.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_b [Mus musculus]
Length = 310
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 140 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 199
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L IP + WLG PSD ++ +PK+ + LT
Sbjct: 200 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 259
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 260 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLR 305
>gi|167526605|ref|XP_001747636.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774082|gb|EDQ87716.1| predicted protein [Monosiga brevicollis MX1]
Length = 407
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+A F RLA D++ R C+++TG+G PD+ TR+F+R + + L +P L D DPYG IL
Sbjct: 238 EAAFMRLAEDRFYQRYPCVIVTGKGQPDVGTRQFVRAVKDALNVPILGLFDSDPYGLKIL 297
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG----------- 113
+ Y S M+YD+ L P++ WLG P+D ++Y +P+ CRL +T E
Sbjct: 298 SVYMSSSKNMSYDSASLTCPDIKWLGLRPTDLDRYKIPEQCRLPMTAEDIETGRRLLQAD 357
Query: 114 -------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI+A F +L+E Y+P K++
Sbjct: 358 FITKNEAWVKELRLMLDTKVKAEIQALSNFGFQYLTEVYLPQKLE 402
>gi|169807684|emb|CAQ16341.1| Topoisomerase 6 subunit A [Platanus x acerifolia]
Length = 138
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 71/106 (66%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA + RLA D++ R CI++T +G PD++TR FL+ + +L+LP LVD DPYG IL
Sbjct: 33 DAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLKKMKTELKLPVLALVDSDPYGLKIL 92
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
+ Y GS M+YD+ L P++ WLG PSD +KY +P+ CRL +T
Sbjct: 93 SVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMT 138
>gi|395509925|ref|XP_003759237.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Sarcophilus harrisii]
Length = 393
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + LP F LVD DP+G +I
Sbjct: 223 DATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHGIEI 282
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD E+ +P+ + LT
Sbjct: 283 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRGTLIPLTKRDQMKLDSILKR 342
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K+Q
Sbjct: 343 PYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQ 388
>gi|354478583|ref|XP_003501494.1| PREDICTED: meiotic recombination protein SPO11 [Cricetulus griseus]
Length = 361
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 191 DATFQRLLDDNFCSRMSPCIMVTGKGIPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 250
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
L Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 251 LCVYKYGSMSMSFEAHSLTVPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQRKLDSILKR 310
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 311 PYITYQPLWRKELEMMADSKMKAEIQALTFLSADYLSRVYLPNKLR 356
>gi|348502949|ref|XP_003439029.1| PREDICTED: meiotic recombination protein SPO11-like [Oreochromis
niloticus]
Length = 390
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +CT+ CI+ITG+G PD+++R ++ L ++L +P F LVD DP+G +I
Sbjct: 220 DATFQRLLDDDFCTKLSPCIIITGKGVPDVNSRLMVKRLWDELHIPIFALVDADPHGIEI 279
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS+ M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 280 MCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPKDALIPLTKRDESKLCSLLER 339
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI++ A + FL++ Y+P+K++
Sbjct: 340 PYLTSQPEWEKEMKLMQQNKVKAEIQSLTAIAPDFLTQIYLPNKLR 385
>gi|395509923|ref|XP_003759236.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Sarcophilus harrisii]
Length = 355
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + LP F LVD DP+G +I
Sbjct: 185 DATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHGIEI 244
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD E+ +P+ + LT
Sbjct: 245 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRGTLIPLTKRDQMKLDSILKR 304
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K+Q
Sbjct: 305 PYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQ 350
>gi|395829244|ref|XP_003787770.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Otolemur
garnettii]
Length = 396
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + R P F LVD DPYG +I
Sbjct: 226 DATFQRLLDDNFCKKMSPCIMVTGKGVPDLNTRLLVKKLWDTFRTPVFTLVDADPYGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDLKRLNIPKDSLIPLTKRDQMKLDSILQR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLR 391
>gi|327278047|ref|XP_003223774.1| PREDICTED: meiotic recombination protein SPO11-like [Anolis
carolinensis]
Length = 391
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + + CI++TG+G PD++TR L+ L + +P F L+D DP+G +I
Sbjct: 221 DATFQRLLDDNFCNKMDPCIIVTGKGVPDVNTRLLLKKLWDTCHVPIFALMDADPHGIEI 280
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSDFE+ +PK + L+ +
Sbjct: 281 MCIYKYGSMSMSFEAPNLTVPAVRWLGILPSDFERLNIPKTALIPLSKKDQSKLASLQMR 340
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A + S +LS Y+P+K+Q
Sbjct: 341 PFIAYQSTWKNELDIMETCQMKAEIQALNSFSSDYLSRVYLPNKLQ 386
>gi|395829242|ref|XP_003787769.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Otolemur
garnettii]
Length = 358
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + R P F LVD DPYG +I
Sbjct: 188 DATFQRLLDDNFCKKMSPCIMVTGKGVPDLNTRLLVKKLWDTFRTPVFTLVDADPYGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDLKRLNIPKDSLIPLTKRDQMKLDSILQR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLR 353
>gi|149030041|gb|EDL85133.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 321
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 151 DATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 210
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 211 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRR 270
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A S +LS Y+P+K++
Sbjct: 271 PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLR 316
>gi|126303194|ref|XP_001377945.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Monodelphis domestica]
Length = 393
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + LP F LVD DP+G +I
Sbjct: 223 DATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHGIEI 282
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P+ + LT +
Sbjct: 283 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRGTLIPLTKQDQMKLDSILKR 342
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K+Q
Sbjct: 343 PYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQ 388
>gi|157818345|ref|NP_001102434.1| meiotic recombination protein SPO11 [Rattus norvegicus]
gi|149030040|gb|EDL85132.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 331
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 161 DATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 220
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 221 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRR 280
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A S +LS Y+P+K++
Sbjct: 281 PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLR 326
>gi|334312518|ref|XP_003339751.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Monodelphis domestica]
Length = 355
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + LP F LVD DP+G +I
Sbjct: 185 DATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHGIEI 244
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P+ + LT +
Sbjct: 245 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRGTLIPLTKQDQMKLDSILKR 304
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K+Q
Sbjct: 305 PYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQ 350
>gi|149030043|gb|EDL85135.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 306
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 136 DATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 195
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 196 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRR 255
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A S +LS Y+P+K++
Sbjct: 256 PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLR 301
>gi|47229338|emb|CAG04090.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +CT+ CI+ITG+G PD+++R +R L + L +P F LVD DP+G +I
Sbjct: 180 DATFQRLLDDGFCTKLSPCIIITGKGVPDVNSRLMVRKLWDTLHIPIFALVDADPHGIEI 239
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS+ M+++A L +P + WLG PSD ++ +P++ L LT
Sbjct: 240 MCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPQDVLLPLTRRDECKLASLLKR 299
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI++ A + FL+ Y+P+K++
Sbjct: 300 PYLTRQPEWRREMELIQQTKVKAEIQSLSAIAPDFLTNIYLPNKLR 345
>gi|149030042|gb|EDL85134.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 316
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG +I
Sbjct: 146 DATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 205
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 206 MCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRR 265
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
K EI+A S +LS Y+P+K++
Sbjct: 266 PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLR 311
>gi|403282455|ref|XP_003932664.1| PREDICTED: meiotic recombination protein SPO11 [Saimiri boliviensis
boliviensis]
Length = 358
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM MA++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MFIYKYGSMSMAFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKSDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|149734128|ref|XP_001489976.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Equus
caballus]
Length = 395
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R C+++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 225 DATFQRLLDDNFCSRMSPCVIVTGKGVPDLNTRLLVKKLWDVFHVPIFTLVDADPHGIEI 284
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 285 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDALIPLTKRDQMKLDSILKR 344
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 345 PYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRVYLPNKLK 390
>gi|291415677|ref|XP_002724077.1| PREDICTED: meiotic recombination protein SPO11 [Oryctolagus
cuniculus]
Length = 395
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD+STR ++ L + +P F LVD DP+G +I
Sbjct: 225 DATFQRLLDDNFCSRMSPCIMVTGKGTPDLSTRLLVKKLWDTFHIPAFTLVDADPHGIEI 284
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT------------- 110
+ Y++GSM M ++A L +P + WLG PSD + +PK+ + LT
Sbjct: 285 MCIYKYGSMSMCFEAHHLTVPAVRWLGLLPSDVSRLHVPKDSLIPLTKRDLMKLDSILKR 344
Query: 111 -----------------VEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK I+A S +LS Y+P+K++
Sbjct: 345 PYIACQPLWRAEMEAMASSKVKAGIQALTVLSADYLSRVYLPNKLK 390
>gi|73992352|ref|XP_853487.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Canis
lupus familiaris]
Length = 396
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNRMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFALVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P++ + LT
Sbjct: 286 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|149734130|ref|XP_001490003.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Equus
caballus]
Length = 357
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R C+++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 187 DATFQRLLDDNFCSRMSPCVIVTGKGVPDLNTRLLVKKLWDVFHVPIFTLVDADPHGIEI 246
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 247 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDALIPLTKRDQMKLDSILKR 306
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 307 PYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRVYLPNKLK 352
>gi|428170369|gb|EKX39295.1| topoisomerase 6 subunit A [Guillardia theta CCMP2712]
Length = 436
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ C++ITG+G D++TR FLR + + L++P L D D +G IL
Sbjct: 251 DAAFQRLAEDRFYNTYPCVIITGKGEADLATRMFLRRVKDALKIPILGLFDSDAHGLKIL 310
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF 116
+ Y GS M++D+ L P++ WLG PSD +KY +P+ CRL+LT V F
Sbjct: 311 SVYMQGSEAMSHDSANLATPDIKWLGVRPSDLDKYNVPRECRLELTTHDVSF 362
>gi|449274257|gb|EMC83540.1| Meiotic recombination protein SPO11, partial [Columba livia]
Length = 353
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +CT+ CI+ITGRG PD++TR +R L + ++P F L+D DP+G +I
Sbjct: 183 DATFQRLLDDDFCTKLSPCIMITGRGVPDLNTRLLVRKLWDAFQIPVFTLMDADPHGVEI 242
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS+ M+++A L +P + WLG PSD E+ + K+ + T +
Sbjct: 243 MCIYKYGSVSMSFEAHHLTVPSIKWLGLLPSDLERLNIHKDALIPFTKQDQNKLASIQKR 302
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+ + S +LS Y+P+K++
Sbjct: 303 PYLACQPLWKRELDIMAASKLKAEIQVLTSLSSDYLSRVYLPNKLK 348
>gi|348555758|ref|XP_003463690.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Cavia porcellus]
Length = 396
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR +R L E +P LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCYKMSPCIMVTGKGTPDLNTRLLVRRLWELFHVPVLTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT------------- 110
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDSLIPLTKWDQMKLDSILKR 345
Query: 111 --VEG---------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V G +K EI+A + S +LS Y+P+K++
Sbjct: 346 PYVTGQPFWRKEMELMADSKMKAEIQALNSLSSDYLSRVYLPNKLK 391
>gi|351697823|gb|EHB00742.1| Meiotic recombination protein SPO11 [Heterocephalus glaber]
Length = 396
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKMSPCIMVTGKGIPDLNTRLLVKKLWDLFHIPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD + +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHNLTVPAVRWLGLLPSDINRLNIPKDSLIPLTKRDQMKLDSILKR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A + S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEMMADSRMKAEIQALTSLSSDYLSRVYLPNKLK 391
>gi|114682753|ref|XP_514741.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
troglodytes]
gi|397469110|ref|XP_003806207.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
paniscus]
Length = 396
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|348555760|ref|XP_003463691.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Cavia porcellus]
Length = 358
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR +R L E +P LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCYKMSPCIMVTGKGTPDLNTRLLVRRLWELFHVPVLTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT------------- 110
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDSLIPLTKWDQMKLDSILKR 307
Query: 111 --VEG---------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V G +K EI+A + S +LS Y+P+K++
Sbjct: 308 PYVTGQPFWRKEMELMADSKMKAEIQALNSLSSDYLSRVYLPNKLK 353
>gi|410953484|ref|XP_003983400.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Felis
catus]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P++ + LT
Sbjct: 286 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|345790222|ref|XP_867449.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Canis
lupus familiaris]
Length = 358
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNRMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFALVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P++ + LT
Sbjct: 248 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|344296531|ref|XP_003419960.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Loxodonta
africana]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C++ CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCSKISPCIMVTGKGVPDLNTRLLVKKLWDLFHIPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS+ M+++A L +P + WLG PSD ++ +PKN + LT
Sbjct: 286 MCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKNTLIPLTKRDQMKLDSILKR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS+ Y+P+K++
Sbjct: 346 PYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKVYLPNKLK 391
>gi|410899931|ref|XP_003963450.1| PREDICTED: meiotic recombination protein SPO11-like [Takifugu
rubripes]
Length = 364
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD+++R +R L + L +P F LVD DP+G +I
Sbjct: 194 DATFQRLLDDDFCAKLSPCIMITGKGVPDLNSRLMVRKLWDTLHIPIFALVDADPHGIEI 253
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
++ Y++GS+ M+++A L +P + WLG PSD ++ +P++ L LT
Sbjct: 254 MSIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPQDVLLPLTKRDECKLASLLKR 313
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI++ A + FL+ Y+P+K++
Sbjct: 314 PYLSSQPQWKREMELMQQTQVKAEIQSLSAIAPDFLTNIYLPNKLR 359
>gi|296200791|ref|XP_002747753.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Callithrix jacchus]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|109091516|ref|XP_001088572.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Macaca
mulatta]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|6912680|ref|NP_036576.1| meiotic recombination protein SPO11 isoform a [Homo sapiens]
gi|7674367|sp|Q9Y5K1.1|SPO11_HUMAN RecName: Full=Meiotic recombination protein SPO11; AltName:
Full=Cancer/testis antigen 35; Short=CT35
gi|5532654|gb|AAD44812.1|AF149310_1 Spo11 homolog [Homo sapiens]
gi|5815131|gb|AAD52562.1|AF169385_1 SPO11 [Homo sapiens]
gi|61354156|gb|AAX44047.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Homo sapiens]
gi|119595933|gb|EAW75527.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|426392232|ref|XP_004062460.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Gorilla
gorilla gorilla]
Length = 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|402882175|ref|XP_003904626.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Papio
anubis]
Length = 396
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|114682755|ref|XP_001170101.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
troglodytes]
gi|397469112|ref|XP_003806208.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
paniscus]
Length = 358
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|344296529|ref|XP_003419959.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Loxodonta
africana]
Length = 358
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C++ CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCSKISPCIMVTGKGVPDLNTRLLVKKLWDLFHIPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS+ M+++A L +P + WLG PSD ++ +PKN + LT
Sbjct: 248 MCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKNTLIPLTKRDQMKLDSILKR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS+ Y+P+K++
Sbjct: 308 PYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKVYLPNKLK 353
>gi|388556219|dbj|BAM16279.1| Spo11 [Anguilla japonica]
Length = 385
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C++ CI+ITG+G PD+++R +R L + L +P F LVD DP+G +I
Sbjct: 215 DATFQRLLDDGFCSKLAPCIIITGKGVPDVNSRLMVRKLWDTLHVPIFALVDADPHGIEI 274
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL---------------- 107
+ Y++GS+ M+++A+ L +P + WLG PSD E+ LPK+ +
Sbjct: 275 MCIYKYGSVSMSFEAQNLTVPSVMWLGLLPSDIERLRLPKDVLIPFSKKDESKLTSLLRR 334
Query: 108 --------------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
K+ + K EI++ + + FL+ Y+P+K++
Sbjct: 335 PYVVCQPAWEKEMEKMLKQRQKAEIQSLTSLAPDFLTSVYLPNKLR 380
>gi|301759481|ref|XP_002915573.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Ailuropoda melanoleuca]
gi|281348445|gb|EFB24029.1| hypothetical protein PANDA_003591 [Ailuropoda melanoleuca]
Length = 396
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 226 DATFQRLLDDDFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 285
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P++ + LT
Sbjct: 286 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 345
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 391
>gi|300796909|ref|NP_001180019.1| meiotic recombination protein SPO11 [Bos taurus]
gi|296480908|tpg|DAA23023.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
2 [Bos taurus]
Length = 395
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 225 DATFQRLLDDNFCNKMSPCIMVTGKGVPDVNTRLLIKKLWDTFHIPVFTLVDADPHGIEI 284
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 285 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 344
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 345 PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 390
>gi|89511867|dbj|BAE86870.1| Spo11 [Anguilla japonica]
Length = 385
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C++ CI+ITG+G PD+++R +R L + L +P F LVD DP+G +I
Sbjct: 215 DATFQRLLDDGFCSKLAPCIIITGKGVPDVNSRLMVRKLWDTLHVPIFALVDADPHGIEI 274
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL---------------- 107
+ Y++GS+ M+++A+ L +P + WLG PSD E+ LPK+ +
Sbjct: 275 MCIYKYGSVSMSFEAQNLTVPSVMWLGLLPSDIERLRLPKDVLIPFSKKDESKLTSLLRR 334
Query: 108 --------------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
K+ + K EI++ + + FL+ Y+P+K++
Sbjct: 335 PYVVCQPAWEKEMEKMLKQRQKAEIQSLTSLAPDFLTSVYLPNKLR 380
>gi|432865769|ref|XP_004070604.1| PREDICTED: meiotic recombination protein SPO11 [Oryzias latipes]
Length = 399
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL ND +C + CI+ITG+G PD+++R ++ L + L++P F LVD DP+GF+I
Sbjct: 229 DATFQRLLNDDFCRKLSPCIMITGKGVPDVNSRLMVKKLWDTLQIPIFALVDADPHGFEI 288
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
+ Y++GS+ M+++A L +P + WLG PSD ++ +PK L LT
Sbjct: 289 MCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLMVPKRSLLPLT 335
>gi|410953486|ref|XP_003983401.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Felis
catus]
Length = 358
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P++ + LT
Sbjct: 248 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|296200789|ref|XP_002747752.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Callithrix jacchus]
Length = 358
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|426392234|ref|XP_004062461.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Gorilla
gorilla gorilla]
Length = 358
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|402882177|ref|XP_003904627.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Papio
anubis]
Length = 358
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|109091518|ref|XP_001088459.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Macaca
mulatta]
Length = 358
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|38201680|ref|NP_937998.1| meiotic recombination protein SPO11 isoform b [Homo sapiens]
gi|21706947|gb|AAH33591.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Homo sapiens]
gi|119595932|gb|EAW75526.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 358
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|301759479|ref|XP_002915572.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Ailuropoda melanoleuca]
Length = 358
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 188 DATFQRLLDDDFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +P++ + LT
Sbjct: 248 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 307
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 353
>gi|426241227|ref|XP_004014493.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Ovis
aries]
Length = 395
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 225 DATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 284
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 285 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 344
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 345 PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 390
>gi|296480907|tpg|DAA23022.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
1 [Bos taurus]
Length = 357
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 187 DATFQRLLDDNFCNKMSPCIMVTGKGVPDVNTRLLIKKLWDTFHIPVFTLVDADPHGIEI 246
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 247 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 306
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 307 PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 352
>gi|332207876|ref|XP_003253022.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein SPO11
[Nomascus leucogenys]
Length = 420
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 250 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 309
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 310 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 369
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 370 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 415
>gi|345328313|ref|XP_003431261.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein
SPO11-like [Ornithorhynchus anatinus]
Length = 396
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Query: 2 YIL----DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDC 56
YIL DA F RL +D +C + CI+ITG+G PD++TR ++ L + +P F LVD
Sbjct: 219 YILIVEKDATFQRLLDDNFCHKMSPCIMITGKGVPDLNTRLMIKKLWDTFHIPVFTLVDA 278
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
DP+G +I+ Y++GS+ M+++A L +P + WLG PSD E+ +PK+ + LT
Sbjct: 279 DPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIERLNIPKDTLIPLT 332
>gi|147223337|emb|CAN13251.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 395
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 225 DATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 284
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 285 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 344
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 345 PYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 390
>gi|426241229|ref|XP_004014494.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Ovis
aries]
Length = 357
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 187 DATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 246
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 247 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 306
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 307 PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 352
>gi|119719577|ref|YP_920072.1| DNA topoisomerase VI subunit A [Thermofilum pendens Hrk 5]
gi|119524697|gb|ABL78069.1| Spo11/DNA topoisomerase [Thermofilum pendens Hrk 5]
Length = 379
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 29/169 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
AVF +L +++ +N CI++TG+G PD STRR +R L E+ LP + L D D YGF I +
Sbjct: 211 AVFEKLNEEEFWKKNNCILVTGKGQPDRSTRRMVRRLWEEFGLPVYILTDGDSYGFYIYS 270
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP-----------KNCR-------- 106
YR GS+ ++Y+++ L PE +LG PSD E+Y L K +
Sbjct: 271 VYRSGSISLSYESERLATPEARFLGVSPSDIERYELQGFTIKATERDLKRAKELMNYPWF 330
Query: 107 ---------LKLTVEGV-KFEIEAFCACSFSFLSEKYIPSKIQGVYSVV 145
L+L +E K EIEAF +LS +YIP KI+ ++
Sbjct: 331 KESKRWMEELELFLEKKEKVEIEAFAKHGLKYLSSEYIPKKIKNKQWII 379
>gi|405945979|gb|EKC17530.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 236
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA+F RL ++ +C R R CIVITG+G+PD++TR L L + + LVD DPYG +I
Sbjct: 67 DAIFQRLLSEGFCERMRPCIVITGKGFPDMNTRMLLNRLWREFSPKFYILVDADPYGIEI 126
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE----------- 112
+T Y++GS ++++A L +P + WLG PSD ++ L ++ + L +
Sbjct: 127 MTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKEDSLIDLKLSDRNKISDILAR 186
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K EIE+ + S SFL+ Y+P+K++
Sbjct: 187 PYISKSQLLYKELNVLLDLGKKAEIESLDSISTSFLTNVYLPTKLK 232
>gi|157427754|ref|NP_001098783.1| meiotic recombination protein SPO11 [Sus scrofa]
gi|147223336|emb|CAN13250.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 357
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C + CI++TG+G PD++TR ++ L + +P F LVD DP+G +I
Sbjct: 187 DATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 246
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 247 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 306
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 307 PYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 352
>gi|363741696|ref|XP_001232076.2| PREDICTED: meiotic recombination protein SPO11 [Gallus gallus]
Length = 382
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D++C + CI+ITGRG PD++TR +R L + L++P F L+D DP+G +I
Sbjct: 212 DATFQRLLDDEFCIKLAPCIMITGRGIPDLNTRLLVRKLWDTLQIPIFTLMDADPHGVEI 271
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS+ M+++A L +P + WLG PSD ++ + K+ + T +
Sbjct: 272 MCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDIKRLNIRKDVLIPFTKQDQNKLASLQKR 331
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+ + S +LS Y+P+K+Q
Sbjct: 332 PYIACQPVWKKELEIMAASKMKAEIQVLTSLSSDYLSRVYLPNKLQ 377
>gi|45387775|ref|NP_991245.1| meiotic recombination protein SPO11 [Danio rerio]
gi|41107578|gb|AAH65463.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Danio rerio]
gi|182892100|gb|AAI65825.1| Spo11 protein [Danio rerio]
Length = 383
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C R CI+ITG+G PD+++R +R L + L +P F LVD DP+G +I
Sbjct: 213 DATFQRLLDDDFCARLSPCIIITGKGVPDVNSRLMVRKLWDALHVPVFALVDADPHGIEI 272
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC------------------ 105
+ Y++GS+ MA++A L +P + WLG PSD ++Y +P+
Sbjct: 273 MCIYKYGSVSMAFEAHSLTVPSVLWLGLLPSDIQRYRVPEEALIPFAKADERKISSLRSR 332
Query: 106 ----------RLKLTVEGVKFEIEAFCACSFS--FLSEKYIPSKIQ 139
R T++ +K + E C S + FL+ Y+P+K++
Sbjct: 333 SYITCQPTWEREVETMQNLKRKAEIQCLASIAPHFLTRVYLPNKLR 378
>gi|405969559|gb|EKC34523.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 614
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA+F RL ++ +C R R CIVITG+G+PD++TR L L + + LVD DPYG +I
Sbjct: 445 DAIFQRLLSEGFCERMRPCIVITGKGFPDMNTRMLLNRLWREFSPKFYILVDADPYGIEI 504
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE----------- 112
+T Y++GS ++++A L +P + WLG PSD ++ L + + L +
Sbjct: 505 MTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKDDSFIDLKLSDRNKITDILAR 564
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K EIE+ + S SFL+ Y+P+K++
Sbjct: 565 PYISKSQLLYKELNVLLDLGKKAEIESLDSISTSFLTNVYLPTKLK 610
>gi|390348826|ref|XP_780029.3| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Strongylocentrotus purpuratus]
Length = 402
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F ++ +D R R CI+ITG+G+PDI+TR +R L + L +P F LVD DP+G I
Sbjct: 232 DATFQKIIDDGLMDRMRNCIIITGKGFPDINTRMMVRKLWDTLHIPVFALVDADPHGLAI 291
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL---------------- 107
L Y+FGS ++Y++ L +P + WLG PSD + +P+ +
Sbjct: 292 LFVYKFGSRSLSYESHSLTVPSIRWLGVLPSDVKGLRIPEKALVPLSPSDLKKASHLMRR 351
Query: 108 --------------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
++ G K EI++ A S +FL++ Y+P+K++
Sbjct: 352 PFYKELPQWMSELQEMLHSGYKAEIQSLTAISETFLTDVYLPTKLR 397
>gi|326932162|ref|XP_003212189.1| PREDICTED: meiotic recombination protein SPO11-like [Meleagris
gallopavo]
Length = 382
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D++C + CI+ITGRG PD++TR +R L + ++P F LVD DP+G +I
Sbjct: 212 DATFQRLLDDEFCIKLAPCIMITGRGIPDLNTRLLVRKLWDTFQIPIFTLVDADPHGVEI 271
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL--------KLT----- 110
+ Y++GS+ M+++A L +P + WLG PSD ++ + ++ + KLT
Sbjct: 272 MCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDIKRLNIREDILIPFTKQDQNKLTSLQKR 331
Query: 111 -----------------VEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+ + S +LS Y+P+K+Q
Sbjct: 332 PYIACQPAWKEELEIMAASKMKAEIQVLTSLSSDYLSRVYLPNKLQ 377
>gi|449486470|ref|XP_002195778.2| PREDICTED: meiotic recombination protein SPO11 [Taeniopygia
guttata]
Length = 407
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 31/166 (18%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D + + CI+ITGRG PD++TR +R L + ++P F L+D DP+G +I
Sbjct: 237 DATFQRLLDDNFFNKVSPCIMITGRGVPDLNTRLLVRKLWDSFQIPVFTLMDADPHGVEI 296
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG---------- 113
+ Y++GS M+++A L +P + WLG PSD E+ + K+ + T +
Sbjct: 297 MCVYKYGSASMSFEAHHLTVPSVKWLGLLPSDLERLNIRKDALIPFTKQDENKLASIQKR 356
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+ + S +LS Y+P+K+Q
Sbjct: 357 PYIACQPLWKKELEIMAASKLKAEIQVLTSVSSDYLSRVYLPNKLQ 402
>gi|383864596|ref|XP_003707764.1| PREDICTED: meiotic recombination protein SPO11-like [Megachile
rotundata]
Length = 388
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 25/160 (15%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L D + CI++TG+GYPD++TR ++LL EKL LP + +VD DP+G DI+
Sbjct: 226 DAVFQKLLEDDCMSSLNCILVTGKGYPDVATRMLVKLLAEKLGLPVYVVVDADPFGVDIM 285
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE----------KYGLPKNC--------- 105
YRFGS ++ + + L P + WLG PS+ + ++ L K
Sbjct: 286 CVYRFGSSTLSKENESLVCPNVRWLGIHPSELQPLGVNTIPLTEFDLSKLTAIESRPYMT 345
Query: 106 -----RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQG 140
L++ +G K EIE + S FL+ Y+P KI+G
Sbjct: 346 PRFFKELEIMRKG-KAEIENVSSFSRKFLTSMYLPCKIKG 384
>gi|156392691|ref|XP_001636181.1| predicted protein [Nematostella vectensis]
gi|156223282|gb|EDO44118.1| predicted protein [Nematostella vectensis]
Length = 405
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 31/167 (18%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
+A +HRL +D + N CI+ITG+GYPD++TR+ + L L +P LVD DP+G +I
Sbjct: 235 EATYHRLLDDGLLEKLNPCIMITGKGYPDVNTRQMVHRLWCTLHVPVMALVDADPHGIEI 294
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT------------- 110
L+ Y++GS ++++ L +P + WLG +PS+ ++ +P++ R+ LT
Sbjct: 295 LSVYKYGSKALSFNVHDLTVPTIRWLGVWPSEVDRLSIPEHVRIPLTERDRSKCHALLKR 354
Query: 111 -----------------VEGVKFEIEAFCACSFSFLSEKYIPSKIQG 140
+G K E++A + SFLS+ YI KI+
Sbjct: 355 PFMDSHPAWRQEIEHMLTKGYKAEMQALSTIATSFLSDTYIALKIRN 401
>gi|340721663|ref|XP_003399236.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
terrestris]
Length = 398
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 25/160 (15%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L D + CI++TG+GYPD++TR ++LL EKL LP + +VD DP+G DI+
Sbjct: 236 DAVFQKLLEDDCISSLSCILVTGKGYPDVTTRMLVKLLSEKLELPVYIIVDADPFGVDIM 295
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRLKLTVEGV--- 114
YRFGS ++ + K L ++ WLG PS+ G+ RL + +EG
Sbjct: 296 CVYRFGSAALSRERKCLACSKVRWLGIHPSELLALGVNTVPLTEFDFSRL-MALEGRPYM 354
Query: 115 --------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIE + S FL+ Y+P KI+G
Sbjct: 355 TDAFRKELEIMRTGKAEIENVYSSSGRFLAATYLPCKIKG 394
>gi|350404734|ref|XP_003487202.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
impatiens]
Length = 401
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 25/160 (15%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L D + CI++TG+GYPD++TR ++LL EKL LP + +VD DP+G DI+
Sbjct: 239 DAVFQKLLKDDCTSSLSCILVTGKGYPDVTTRMLVKLLSEKLELPVYIIVDADPFGVDIM 298
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRLKLTVEGV--- 114
YRFGS ++ + K L ++ WLG PS+ G+ RL + +EG
Sbjct: 299 CVYRFGSAALSRERKCLACSKVRWLGIHPSELLALGVNTVPLTEFDFSRL-MALEGRPYM 357
Query: 115 --------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIE + S FL+ Y+P KI+G
Sbjct: 358 TDAFRKELEIMRTGKAEIENVYSSSGRFLAATYLPCKIKG 397
>gi|196008211|ref|XP_002113971.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
gi|190582990|gb|EDV23061.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
Length = 161
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
+A+F RL + + N CIVITG+GYPD+STR +R L + L+LPTF L D DPYG +I
Sbjct: 48 EAIFQRLLDGNIKDKLNSCIVITGKGYPDMSTRLMIRFLWDALKLPTFVLTDADPYGLEI 107
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKY 99
Y++GS +M+++A+ L P + WLG PS+F KY
Sbjct: 108 FCVYKYGSKEMSFEAENLCFPLIKWLGVLPSEFNKY 143
>gi|241679558|ref|XP_002412658.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
gi|215506460|gb|EEC15954.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
Length = 264
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 31/165 (18%)
Query: 5 DAVFHRLANDQYC-TRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F +L ND + + CI+ITG+GYPD++TR LR L ++ +P + LVD DPYG +I
Sbjct: 96 DATFQKLLNDGFLKSAGPCILITGKGYPDVNTRELLRRLHVEVDIPVYALVDADPYGIEI 155
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC---------RLK------ 108
L Y +GS+ MA + + +P + WLG PSD + L K+C +L+
Sbjct: 156 LCVYAYGSLAMANETDSMAVPRIRWLGVHPSDVVTFEL-KDCPPLSYGDKSKLRNLLARP 214
Query: 109 ------------LTVEGV--KFEIEAFCACSFSFLSEKYIPSKIQ 139
+ ++G+ K EI+ C+ +FLS+ YIPSKI+
Sbjct: 215 YVDSKPAWKEQMVLLDGLQRKAEIQGLCSVDPTFLSDVYIPSKIK 259
>gi|198425262|ref|XP_002129892.1| PREDICTED: similar to Spo11 [Ciona intestinalis]
Length = 385
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RL + + T CI++TG+G PD++TR +R + +L +P F L+D DP+G +I+
Sbjct: 216 DATFQRLLDQGFTTNMPCILVTGKGVPDVNTRILIRKIWNELEIPVFGLMDADPHGIEIM 275
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
YRFGS+ ++D L +P M W+G FPSD + LP + L L+ +
Sbjct: 276 CVYRFGSLSQSHDVHSLALPFMKWIGVFPSDITRLRLPDDVTLPLSDKDKSKCRDIFARP 335
Query: 115 --------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EI+A S ++L++ +IPSKI+
Sbjct: 336 YIEYHARLAEELHNMLRCDRKAEIQALMRFSPNYLAQVFIPSKIKN 381
>gi|443684396|gb|ELT88325.1| hypothetical protein CAPTEDRAFT_89794 [Capitella teleta]
Length = 364
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 30/148 (20%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLR 82
I+ITG+G+PD++TR F+RLL + RLPT CLVD DP+G +I++TY++GS +++A L
Sbjct: 213 ILITGKGFPDVNTRLFVRLLWQHFRLPTLCLVDADPHGLEIMSTYKYGSKAQSFEANHLT 272
Query: 83 IPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------------------------- 114
+P + WLG PS+ ++ N ++LT +
Sbjct: 273 VPSLRWLGILPSEVQRLIPSTNGLMQLTERDIKKANELLTRPYLSAQPLWKTEIEYLIKT 332
Query: 115 --KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EI+ + FLS Y+P+KI+
Sbjct: 333 KMKAEIQCLSQIAIDFLSNIYLPNKIRN 360
>gi|322786130|gb|EFZ12738.1| hypothetical protein SINV_13918 [Solenopsis invicta]
Length = 219
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 23/159 (14%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D +F +L + C RCI++TG+GYPD++TR +++L EKL LP + +VD DP+G +I+
Sbjct: 58 DTIFQKLLEENCCRILRCILVTGKGYPDVATRMLVKMLSEKLNLPVYIVVDADPFGIEIM 117
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG-----LPKNCRLKL-TVEGV---- 114
YRFGS + + L P WLG PS+ G L + +KL ++E
Sbjct: 118 LIYRFGSSTLRKVNESLACPNARWLGIHPSELIAIGAKTIPLTEADLVKLRSIEARGYVN 177
Query: 115 -------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA + S +FL+E Y+ KI G
Sbjct: 178 EAISKQLSILRKGKAEIEAVSSFSKNFLTETYLSYKIDG 216
>gi|320168151|gb|EFW45050.1| topoisomerase [Capsaspora owczarzaki ATCC 30864]
Length = 406
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RL+ D++ + CI+IT RG PD+STR FL ++ +L +P LVD DPYG IL
Sbjct: 250 DAAFMRLSEDRFYNQYPCIIITARGQPDVSTRLFLNMVKTRLNIPILGLVDSDPYGLKIL 309
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG-----------AFPSDFEKYGLPKN-----CRLK 108
+ Y GS M+YD+ L ++ WLG + D K KN L+
Sbjct: 310 SVYLSGSKNMSYDSASLTTSDIKWLGECRLDMTESDIKYGQDLLKEDFIKNNPAWMAELE 369
Query: 109 LTVEGV-KFEIEAFCACSFSFLSEKYIPSKIQ 139
L ++ K EI+A F +L++ Y+P K+Q
Sbjct: 370 LMLKTKEKAEIQALSNFGFQYLTQTYLPLKLQ 401
>gi|380015951|ref|XP_003691957.1| PREDICTED: meiotic recombination protein SPO11-like [Apis florea]
Length = 404
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 25/163 (15%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L D + CI+ITG+GYPD++TR ++LL EKL LP + +VD DP+G DI+
Sbjct: 232 DAVFQKLLEDDCTSSLNCILITGKGYPDVATRMLVKLLSEKLELPVYIIVDADPFGVDIM 291
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG----------LPKNCRLK------ 108
YRFGS ++ + + L + WLG PS+ G L K L+
Sbjct: 292 CVYRFGSAALSRERETLACSNVRWLGIHPSELLALGVNTAPLTEFDLSKLTALEGRPYLT 351
Query: 109 ---LTVEGV-----KFEIEAFCACSFSFLSEKYIPSKIQGVYS 143
L GV K EIE + S FL Y+P KI+G +
Sbjct: 352 GAFLREVGVMRRLGKAEIENV-SSSRKFLVSTYLPCKIKGTIT 393
>gi|355563008|gb|EHH19570.1| hypothetical protein EGK_02264 [Macaca mulatta]
gi|355784368|gb|EHH65219.1| hypothetical protein EGM_01949 [Macaca fascicularis]
Length = 407
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 42/177 (23%)
Query: 5 DAVFHRLANDQYCTRNR-CIVIT-----------GRGYPDISTRRFLRLLIEKLRLPTFC 52
DA F RL +D +C + CI+IT G+G PD++TR ++ L + +P F
Sbjct: 226 DATFQRLLDDNFCNKLSPCIMITSTPGFQHLKSKGKGVPDLNTRLLVKKLWDTFHVPVFT 285
Query: 53 LVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE 112
LVD DP+G +I+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 286 LVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNR 345
Query: 113 G------------------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 346 DQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 402
>gi|156552691|ref|XP_001599577.1| PREDICTED: meiotic recombination protein SPO11 [Nasonia
vitripennis]
Length = 381
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 29/161 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D+VF +L +D+ + CI++TG+GYPD+ TR + LL EK+RLP + LVD +PYGF+I+
Sbjct: 219 DSVFQKLLHDELPASSSCILVTGKGYPDVPTRMLVNLLSEKVRLPVYALVDANPYGFEIM 278
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT-------------- 110
YRFG++ + K L EM WLG D Y +P R++LT
Sbjct: 279 CVYRFGTLNNSGFRKQLLCSEMRWLGVHQEDLRLYNIP---RVRLTKGDYKKIGELMDRS 335
Query: 111 ------------VEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
++ K EIE+ FL++ YIP KI+
Sbjct: 336 YVDSDFSKHLMEMKQGKAEIESVQQPKKRFLADFYIPEKIR 376
>gi|440912496|gb|ELR62058.1| Meiotic recombination protein SPO11 [Bos grunniens mutus]
Length = 408
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 39/174 (22%)
Query: 5 DAVFHRLANDQYCTRNR-CIVIT--------GRGYPDISTRRFLRLLIEKLRLPTFCLVD 55
DA F RL +D +C + CI++T G+G PD++TR ++ L + +P F LVD
Sbjct: 230 DATFQRLLDDNFCNKMSPCIMVTVYYLLLPQGKGVPDLNTRLLIKKLWDTFHIPVFTLVD 289
Query: 56 CDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG-- 113
DP+G +I+ Y++GSM M+++A L +P + WLG PSD ++ +PK + LT
Sbjct: 290 ADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQM 349
Query: 114 ----------------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 350 KLDSILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 403
>gi|110760973|ref|XP_001122679.1| PREDICTED: meiotic recombination protein SPO11 [Apis mellifera]
Length = 400
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 23/159 (14%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D+VF +L D + CI++TG+GYPD++TR ++LL EKL LP + +VD DP+G DI+
Sbjct: 238 DSVFQKLLEDDCTSSLNCILVTGKGYPDVATRMLVKLLSEKLELPVYIIVDADPFGIDIM 297
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG-----LPKNCRLKLT-VEGVKFEI 118
YRFGS ++ + + L + WLG PS+ G L + KLT +EG +
Sbjct: 298 CVYRFGSAALSRERESLACSNVRWLGVHPSELLALGVNTAPLTEFDLSKLTALEGRPYTT 357
Query: 119 EAF-----------------CACSFSFLSEKYIPSKIQG 140
AF + S FL Y+P KI+G
Sbjct: 358 AAFLGELGVMRKLGKAEIENVSSSRKFLVSTYLPCKIKG 396
>gi|321478172|gb|EFX89130.1| meiotic recombination protein Spo11 [Daphnia pulex]
Length = 295
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 86/168 (51%), Gaps = 32/168 (19%)
Query: 5 DAVFHRLANDQYCT-RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D+ F +L +D+ CI+ITG+GYPD++TRRFLR L ++L+LP LVD DP+G I
Sbjct: 126 DSTFQKLIDDKIERFIGDCILITGKGYPDVNTRRFLRRLWDELQLPPLALVDADPHGISI 185
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT------VEGV--- 114
L YRFGS + D + L P++ ++G PSD E +P +L LT V+ +
Sbjct: 186 LAVYRFGSQNLE-DIEHLSTPQLRYIGLQPSDIEALQIPDEAKLPLTQRDRSLVDTLASR 244
Query: 115 ---------------------KFEIEAFCACSFSFLSEKYIPSKIQGV 141
K EI+ FLS Y+P+KIQ +
Sbjct: 245 PFITQNQLLRDQVKLLRRLDCKVEIQGLTKIHPQFLSRTYLPAKIQSM 292
>gi|307211946|gb|EFN87858.1| Meiotic recombination protein SPO11 [Harpegnathos saltator]
Length = 409
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 27/162 (16%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F +L ++ C R CI++TG+GYPD +TR L+LL +K+ LP + + D DP+G DI
Sbjct: 247 DATFQKLL-EENCPRALNCILLTGKGYPDTATRMLLKLLSDKMDLPVYIVADADPFGVDI 305
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG----------LPK---------- 103
+ YRFGSM + + + L P WLG FP++ G L K
Sbjct: 306 VLIYRFGSMALCRENENLTCPNARWLGIFPTELIALGAKTVPLSEADLAKLRSIEARAYV 365
Query: 104 ----NCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ +L + +G K EIEA S +FL+ Y+P KI G+
Sbjct: 366 NEAISKQLSVLRKG-KAEIEAVSTLSTNFLTATYLPYKIDGL 406
>gi|332024438|gb|EGI64636.1| Meiotic recombination protein SPO11 [Acromyrmex echinatior]
Length = 423
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 23/159 (14%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + +CI++TG+GYPD++TR F+++L EK+ LP + +VD DP+G DI+
Sbjct: 261 DAVFQKLLEENCSCSLKCILVTGKGYPDVATRMFVKILSEKMELPIYIVVDADPFGIDIM 320
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG-----LPKNCRLKL-TVEGV---- 114
YRFGS + + + L P WLG PS+ G L + +KL ++E
Sbjct: 321 LIYRFGSSTLCKENESLACPNARWLGIHPSELIPIGAKTIPLTEADLIKLRSIEARSYVN 380
Query: 115 -------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K E+EA + S +F +E Y+ KI G
Sbjct: 381 EAISKQLSILRKGKAEMEAVSSFSKNFFTETYLSYKIDG 419
>gi|327310402|ref|YP_004337299.1| DNA topoisomerase [Thermoproteus uzoniensis 768-20]
gi|326946881|gb|AEA11987.1| DNA topoisomerase (ATP-hydrolyzing) [Thermoproteus uzoniensis
768-20]
Length = 357
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ ++IT +G PD +TRRF++ L E+ RLP + L D DPYG I
Sbjct: 189 DAIFQRLVREKFWSQENAVLITAKGMPDRATRRFVKRLNEEYRLPVYVLTDGDPYGIYIY 248
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y+++ L P+ +LG P D E+Y +P ++ T +
Sbjct: 249 SVYKSGSIKLSYESERLATPKAKFLGVAPLDIERYKIPDQFVIRATDRDIKRAQELLKYP 308
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA A +L + YI KI+G
Sbjct: 309 WFQNDVWKKELEYFLKTKKKVEIEALSAHGLKYLHD-YIKDKIRG 352
>gi|328719464|ref|XP_003246771.1| PREDICTED: meiotic recombination protein SPO11 [Acyrthosiphon
pisum]
Length = 325
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 5 DAVFHRLANDQYCTRNRC--IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
+A F ++ N+ +N+C ++ITG+G+PDI+TR F++ L KL +P LVD +P+G +
Sbjct: 192 NASFQKIINEGLLKKNKCTFVMITGKGFPDINTRLFVKQLSCKLNIPILVLVDANPFGIE 251
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP 102
I+ YRFGS M + + L +P + WLG +P+D E LP
Sbjct: 252 IMCVYRFGSNSMVHQNEMLCVPSIKWLGVYPTDIESLNLP 291
>gi|197210319|gb|ACH48180.1| Spo11 [Acyrthosiphon pisum]
Length = 317
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 5 DAVFHRLANDQYCTRNRC--IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
+A F ++ N+ +N+C ++ITG+G+PDI+TR F++ L KL +P LVD +P+G +
Sbjct: 184 NASFQKIINEGLLKKNKCTFVMITGKGFPDINTRLFVKQLSCKLNIPILVLVDANPFGIE 243
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP 102
I+ YRFGS M + + L +P + WLG +P+D E LP
Sbjct: 244 IMCVYRFGSNSMVHQNEMLCVPSIKWLGVYPTDIESLNLP 283
>gi|352681956|ref|YP_004892480.1| type II DNA topoisomerase VI subunit A [Thermoproteus tenax Kra 1]
gi|350274755|emb|CCC81401.1| type II DNA topoisomerase VI, subunit A [Thermoproteus tenax Kra 1]
Length = 366
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ I+IT +G PD +TRRF+R L E+ +LP + L D DPYG I
Sbjct: 198 DAIFQRLVREKFWSQENAILITAKGMPDRATRRFVRRLNEEYKLPVYVLTDGDPYGIYIY 257
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y+++ L P +LG P D E+Y +P ++ T +
Sbjct: 258 SVYKSGSIKLSYESERLATPRAKFLGVAPLDIERYKIPDQFVIRATERDIKRAQELLKYP 317
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA A +L + YI KI+
Sbjct: 318 WFQNEIWKKELDYFLKTKKKVEIEALSAHGLKYLHD-YIKDKIRN 361
>gi|153005629|ref|YP_001379954.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. Fw109-5]
gi|152029202|gb|ABS26970.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. Fw109-5]
Length = 367
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 29/164 (17%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAV+ R D++ R +C+++TG+G P RR ++ L +L+LP + LVD DP+GF I
Sbjct: 198 DAVWRRFNEDKFWQREKCVIVTGQGQPPRGVRRLVQRLHTELKLPVYVLVDNDPWGFYIY 257
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
+ + GS+ +AY++ + +P+ ++G D Y LP N +K+ +
Sbjct: 258 SVMKQGSINLAYESMRMAVPDARFIGLSSFDKATYKLPDNVAIKMNDQDNARAKQMLAYP 317
Query: 113 -----------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K+E+EA SF++E+Y+P K++
Sbjct: 318 WFQRPKWQREIEEMVHSGQKYELEALSRRGISFITEEYLPRKLR 361
>gi|126459556|ref|YP_001055834.1| DNA topoisomerase VI subunit A [Pyrobaculum calidifontis JCM 11548]
gi|126249277|gb|ABO08368.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Pyrobaculum
calidifontis JCM 11548]
Length = 367
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ CI++T +G PD +TRRF+R L E+ +LP + L D DPYG+ I
Sbjct: 199 DAIFQRLVREKFWSQENCILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIY 258
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y+++ L PE +LG +D + Y + N + V
Sbjct: 259 SVYKSGSIKLSYESERLATPEAKFLGLTATDIDAYKISDNYVIAANDRDVKRAQELLRYP 318
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA FL + Y+ KI+G
Sbjct: 319 WFQKPEWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRG 362
>gi|156937842|ref|YP_001435638.1| DNA topoisomerase VI subunit A [Ignicoccus hospitalis KIN4/I]
gi|156566826|gb|ABU82231.1| DNA topoisomerase (ATP-hydrolyzing) [Ignicoccus hospitalis KIN4/I]
Length = 380
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 35/170 (20%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L ++ RN CI+I+ G PD +TRRF+R L E+L LP + L D DPYG+ I
Sbjct: 205 DAVFQQLHRIKFWQRNNCILISTSGQPDRATRRFIRRLNEELGLPVYVLTDADPYGWYIF 264
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD-FEKYGL-----------PKNCRLKLTVE 112
+ R GS+ ++++++ L P +LG SD FEK L K+ +K E
Sbjct: 265 SVIRSGSINLSFESERLATPNAKFLGVSMSDVFEKNWLSPKERKNVIIVAKDRDIKRAYE 324
Query: 113 GVKFE-----------------------IEAFCACSFSFLSEKYIPSKIQ 139
+K+E IEA FL+E Y+P KIQ
Sbjct: 325 MMKYEWFKNSPKWMHELKLFLKEKKKLEIEALAVKGLKFLAEVYLPQKIQ 374
>gi|302037397|ref|YP_003797719.1| DNA topoisomerase VI subunit A [Candidatus Nitrospira defluvii]
gi|300605461|emb|CBK41794.1| DNA topoisomerase VI, subunit A [Candidatus Nitrospira defluvii]
Length = 368
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 29/161 (18%)
Query: 8 FHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTY 67
++RL+ D++ R C+++TG G P RR R L E+ +LP + LVD DP+G+ I +
Sbjct: 202 WNRLSEDKFWRRYNCVLLTGNGQPPRGVRRLARRLHEEHKLPVYVLVDNDPWGYYIYSVV 261
Query: 68 RFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT----------------- 110
+ GS+ +A++++ + IP+ ++G +D E+Y LP+N +KL
Sbjct: 262 KQGSINLAFESQRMAIPKAKFIGLSSADPERYELPRNVGIKLNEKDITRAKELLNYQWFQ 321
Query: 111 ------------VEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G+K+E++A F +L++KY+P K++
Sbjct: 322 KPAWQQEIKRMLTSGLKYELDALANKDFQYLTKKYLPRKLK 362
>gi|440791105|gb|ELR12359.1| topoisomerase Spo11, putative [Acanthamoeba castellanii str. Neff]
Length = 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
Query: 26 TGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
TG+G PD++ RRF+R+L + L L L D DP+G IL TY FGS++M YDA+ L P
Sbjct: 163 TGKGVPDLAARRFVRMLKDTLPSLVVLALCDYDPWGLQILCTYAFGSLRMTYDAESLATP 222
Query: 85 EMHWLGAFPSDFEKYGLPKNCRLKLT------------------------------VEGV 114
E+ WLG D +K+ LP C LT G
Sbjct: 223 ELLWLGVHDEDLKKWELPAACFANLTDVDKRKGETMLSMPALQAKPTWRNQLKSMLAGGK 282
Query: 115 KFEIEAFCACSFSFLSEKYIPSKI 138
K E++A + S SFL + ++P K+
Sbjct: 283 KIEMQALSSISISFLCDTFLPDKM 306
>gi|145592124|ref|YP_001154126.1| DNA topoisomerase VI subunit A [Pyrobaculum arsenaticum DSM 13514]
gi|379003158|ref|YP_005258830.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
gi|145283892|gb|ABP51474.1| Spo11/DNA topoisomerase VI, subunit A [Pyrobaculum arsenaticum DSM
13514]
gi|375158611|gb|AFA38223.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
Length = 367
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 70/111 (63%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ I++T +G PD +TRRF+R L E+ +LP + L D DPYG+ I
Sbjct: 199 DAIFQRLVREKFWSQENAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIY 258
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
+ Y+ GS++++Y+++ L PE +LG +D + Y + N + T VK
Sbjct: 259 SVYKSGSIKLSYESERLATPEAKFLGLTATDIDAYKISDNYVIAATDRDVK 309
>gi|159042113|ref|YP_001541365.1| DNA topoisomerase VI subunit A [Caldivirga maquilingensis IC-167]
gi|157920948|gb|ABW02375.1| DNA topoisomerase (ATP-hydrolyzing) [Caldivirga maquilingensis
IC-167]
Length = 369
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL + Y +C+++T +G PD +TRRF+R L E LP + D DPYG+ I
Sbjct: 201 DAIFQRLNREGYWNSEKCLLVTAKGMPDRATRRFVRRLSEDYGLPVYVFTDGDPYGWYIY 260
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
+ YR GS++++Y+ + L P+ ++G SD KY + N +K T +K
Sbjct: 261 SVYRSGSIKLSYENERLATPDAKFIGVTASDISKYKISDNYVIKATDRDIK 311
>gi|146304518|ref|YP_001191834.1| DNA topoisomerase VI subunit A [Metallosphaera sedula DSM 5348]
gi|145702768|gb|ABP95910.1| DNA topoisomerase (ATP-hydrolyzing) [Metallosphaera sedula DSM
5348]
Length = 386
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 38/173 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + +CI+IT G PD +TRRFLR L E+L+LP + L D DPYG+ I
Sbjct: 208 DAVFQQLHRAGFWRKYKCILITSAGQPDRATRRFLRRLNEELKLPVYILTDADPYGWYIY 267
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG-------------AFPSDFEKYGL---PKNCRLK 108
+ +R GS+ ++Y+++ L P+ +LG A+ S+ E+ K +K
Sbjct: 268 SVFRIGSISLSYESERLATPDAKFLGVSMGDIFGTPKKKAYLSERERSSFIIKAKETDIK 327
Query: 109 LTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+E K EIEA + FL+ +YIP KIQ
Sbjct: 328 RALEIKNYSWFKTKSWEEEINMFLQKKAKLEIEAMASKGLKFLAFQYIPEKIQ 380
>gi|449690981|ref|XP_002162299.2| PREDICTED: meiotic recombination protein SPO11-like [Hydra
magnipapillata]
Length = 348
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 32/170 (18%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
+A+F R+A + + ++ITG+G+PD++TR L + + + +P F LVD DP+G +I
Sbjct: 178 EAIFQRIAEHGFQEKLGHSLIITGKGFPDVNTRMLLNKICKHVSIPVFALVDADPHGIEI 237
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE----------- 112
+ Y+FGS M+Y+A+ L P M WLG P D +P + L+
Sbjct: 238 MFVYKFGSKSMSYEAEHLTCPSMKWLGILPKDIIGMRIPNRVLIPLSQNDNKKLLDLMNR 297
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ-GVY 142
G+K EIE + S +++++ Y+P K++ GV+
Sbjct: 298 PYVLQNKDYKEQINFLHESGLKAEIECLDSISHTYITDIYLPLKLRNGVW 347
>gi|86159261|ref|YP_466046.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775772|gb|ABC82609.1| DNA topoisomerase, type IIB [Anaeromyxobacter dehalogenans 2CP-C]
Length = 367
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 29/164 (17%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAV+ R D++ R +CI++TG G P RR ++ L +L LP + LVD DP+GF I
Sbjct: 198 DAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSELGLPVYVLVDNDPWGFYIY 257
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
+ + GS+ +AY++ + +P+ ++G D K+ LP N +++ +
Sbjct: 258 SVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDDARAKQMLAYP 317
Query: 113 -----------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K+E+EA SF++E+Y+P K++
Sbjct: 318 WFKDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPKKLR 361
>gi|197123330|ref|YP_002135281.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. K]
gi|196173179|gb|ACG74152.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. K]
Length = 367
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 29/164 (17%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAV+ R D++ R +CI++TG G P RR ++ L +L LP + LVD DP+GF I
Sbjct: 198 DAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSELGLPVYVLVDNDPWGFYIY 257
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
+ + GS+ +AY++ + +P+ ++G D K+ LP N +++ +
Sbjct: 258 SVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDDARAKQMLAYP 317
Query: 113 -----------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K+E+EA SF++E+Y+P K++
Sbjct: 318 WFKDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPRKLR 361
>gi|429217560|ref|YP_007175550.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
gi|429134089|gb|AFZ71101.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
Length = 385
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 38/173 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + +++TG G PD +TRRF+R L ++L+LP + L D DPYG+ I
Sbjct: 207 DAVFQQLHRAGFWQKYKALLVTGAGQPDRATRRFVRRLHDELKLPVYILTDSDPYGWYIY 266
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL----------------PKNCRLK 108
+ ++ GS+Q++Y+++ L P+ +LG SD YG K+ +K
Sbjct: 267 SVFKVGSIQLSYESERLATPKAKFLGVSMSDIFGYGTKKAYLSEEERRNFIIKAKDVDIK 326
Query: 109 LTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
E K EIEA + FL+ +YIP KIQ
Sbjct: 327 RAKELMRYSWFHSKLWKREIDMFMDKKAKLEIEAMASKGLKFLAFQYIPEKIQ 379
>gi|220918120|ref|YP_002493424.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955974|gb|ACL66358.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter dehalogenans
2CP-1]
Length = 367
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 29/164 (17%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAV+ R D++ R +CI++TG G P RR ++ L +L LP + LVD DP+GF I
Sbjct: 198 DAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSELGLPVYVLVDNDPWGFYIY 257
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
+ + GS+ +AY++ + +P+ ++G D K+ LP N +++ +
Sbjct: 258 SVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDDARAKQMLAYP 317
Query: 113 -----------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K+E+EA SF++E+Y+P K++
Sbjct: 318 WFKDPKWQREIQEMVRSGEKYELEALSRRGISFVTEEYLPRKLR 361
>gi|374633765|ref|ZP_09706130.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
gi|373523553|gb|EHP68473.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
Length = 386
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 42/175 (24%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + R I+IT G PD +TRRFLR L E+L+LP + L D DPYG+ I
Sbjct: 208 DAVFQQLHRAGFWRKYRAILITSAGQPDRATRRFLRRLNEELKLPVYILTDADPYGWYIY 267
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP------------------KNCR 106
+ +R GS+ ++Y+++ L P+ +LG D +G P K
Sbjct: 268 SVFRIGSISLSYESERLATPDAKFLGVSMGDI--FGTPRKKPYLSERERSSFIIKAKETD 325
Query: 107 LKLTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K +E K EIEA + FL+ +YIP KIQ
Sbjct: 326 IKRALEIKNYEWFKTKSWEEEINAFLQRKAKLEIEAMASKGLKFLAFQYIPEKIQ 380
>gi|158287917|ref|XP_309793.4| AGAP010898-PA [Anopheles gambiae str. PEST]
gi|157019418|gb|EAA05541.4| AGAP010898-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 5 DAVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
D VF RL D + + ++IT +GYPD+STR L+ + + +P + L+D DP+G +
Sbjct: 113 DTVFKRLLEDGILSTFPDTLVLITAKGYPDVSTRLLLKKISDWTHVPIYGLMDADPHGIE 172
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL 101
I Y+FGS+ M + + L +P M W+G FPSD E GL
Sbjct: 173 IFCVYKFGSLAMVHQQRSLAVPTMRWIGLFPSDIELLGL 211
>gi|157137100|ref|XP_001663887.1| meiotic recombination protein spo11 [Aedes aegypti]
gi|108869811|gb|EAT34036.1| AAEL013701-PA [Aedes aegypti]
Length = 707
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 5 DAVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
D VF RL +D TR + IV+T +GYPD++TR L+ + +K R+P + LVD DP+G +
Sbjct: 543 DTVFRRLLDDGILTRLSKKIIVVTSKGYPDVATRLLLKKIWDKHRIPMYALVDADPFGIE 602
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPS 94
I Y+FGS+ +++ + L +P + WLG PS
Sbjct: 603 IYCVYKFGSLALSHQSSHLAVPSIQWLGLRPS 634
>gi|330834337|ref|YP_004409065.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
gi|329566476|gb|AEB94581.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
Length = 386
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 42/175 (24%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + +C++IT G PD +TRRFLR L E+L+LP + L D DPYG+ I
Sbjct: 208 DAVFQQLHRAGFWRKYKCVLITSAGQPDRATRRFLRRLNEELKLPVYILTDADPYGWYIY 267
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP------------------KNCR 106
+ +R GS+ ++Y+++ L P+ +LG D +G P K
Sbjct: 268 SVFRIGSISLSYESERLATPDAKFLGVSMGDI--FGTPRKKPYLSERERSSFIIKAKETD 325
Query: 107 LKLTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K +E K EIEA + FL+ +YIP KIQ
Sbjct: 326 IKRALEIKNYDWFKTKGWEEEINIFLQRKSKLEIEAMASKGLKFLAFQYIPEKIQ 380
>gi|374325958|ref|YP_005084158.1| DNA topoisomerase [Pyrobaculum sp. 1860]
gi|356641227|gb|AET31906.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum sp. 1860]
Length = 367
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ I++T +G PD +TRRF+R L E+ +LP + L D DPYG+ I
Sbjct: 199 DAIFQRLVREKFWSQENAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIY 258
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y+++ L P+ +LG +D + Y + N + +
Sbjct: 259 SVYKSGSIKLSYESERLATPDAKFLGLTATDIDAYKISDNYVIAANDRDIKRAQELLRYP 318
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA FL + Y+ KI+G
Sbjct: 319 WFQKPEWTREVNLFLRKKKKVEIEALSTHGLKFLHD-YLRDKIRG 362
>gi|18313188|ref|NP_559855.1| DNA topoisomerase VI subunit A [Pyrobaculum aerophilum str. IM2]
gi|18160702|gb|AAL64037.1| DNA topoisomerase VI (type II ) subunit a [Pyrobaculum aerophilum
str. IM2]
Length = 367
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 66/100 (66%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ I++T +G PD +TRRF+R L E+ +LP + L D DPYG+ I
Sbjct: 199 DAIFQRLVREKFWSQEGAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIY 258
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
+ Y+ GS++++Y+++ L P+ +LG +D + Y + N
Sbjct: 259 SVYKSGSIKLSYESERLATPDAKFLGLTATDIDTYKISDN 298
>gi|171185844|ref|YP_001794763.1| DNA topoisomerase VI subunit A [Pyrobaculum neutrophilum V24Sta]
gi|170935056|gb|ACB40317.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum neutrophilum
V24Sta]
Length = 367
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ +++T +G PD +TRRF+R L E+ +LP + L D DPYG+ I
Sbjct: 199 DAIFQRLVREKFWSQESAVLVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIY 258
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y+++ L P+ +LG +D + Y + N + +
Sbjct: 259 SVYKSGSIKLSYESERLATPDAKFLGLTATDIDAYKISDNYVIAANDRDIKRAQELLRYP 318
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA FL + Y+ KI+G
Sbjct: 319 WFQKSEWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRG 362
>gi|119872373|ref|YP_930380.1| DNA topoisomerase VI subunit A [Pyrobaculum islandicum DSM 4184]
gi|119673781|gb|ABL88037.1| Spo11/DNA topoisomerase VI, subunit A, N-terminal domain protein
[Pyrobaculum islandicum DSM 4184]
Length = 367
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 65/100 (65%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ ++ I++T +G PD +TRRF+R L E+ +LP + L D DPYG+ I
Sbjct: 199 DAIFQRLVREKFWSQENAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIY 258
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
+ Y+ GS++++Y+++ L P +LG +D + Y + N
Sbjct: 259 SVYKSGSIKLSYESERLATPNAKFLGLTATDIDAYKISDN 298
>gi|357493057|ref|XP_003616817.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
gi|355518152|gb|AES99775.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
Length = 275
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 22 CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
CI++ G G PD+ +R+ +R L L+LP LVD D YGF ILT Y GS +MAYD++ L
Sbjct: 166 CIIVAGSGVPDVCSRKLVRKLSLDLKLPVLALVDGDLYGFRILTIYNKGSQKMAYDSENL 225
Query: 82 RIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
P ++WLG P D + Y +P C +L+
Sbjct: 226 TTPNIYWLGVRPCDADHYDIPSGCIKQLS 254
>gi|326435144|gb|EGD80714.1| hypothetical protein PTSG_01304 [Salpingoeca sp. ATCC 50818]
Length = 435
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+ +L + + + C++ITG+G+P + TR F+RL+ E++ P + +VD D +G +IL
Sbjct: 264 DAILQQLVDCNFAETHNCLLITGKGFPGVDTRYFVRLVAEQV--PVYVVVDADAHGLEIL 321
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL 101
TY +GS +A+ L +P + WLG FPSD ++ +
Sbjct: 322 CTYAYGSQSLAFQNHELAVPHIRWLGVFPSDLTEFNV 358
>gi|413933050|gb|AFW67601.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 380
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 73/170 (42%), Gaps = 78/170 (45%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVIT
Sbjct: 256 ETVFQRLANDKFCERNRCIVIT-------------------------------------- 277
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
Q+A+DA LR+P++ WLG F SDFE+Y LP C L+L+ E
Sbjct: 278 --------QLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARC 329
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
GVKFEIEA A S SFLS +YIP KI QG++
Sbjct: 330 YLHREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMH 379
>gi|302348021|ref|YP_003815659.1| type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
gi|302328433|gb|ADL18628.1| Type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
Length = 387
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 38/173 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I++TG G PD +TRRF+R L E+L LP + L D DPYG+ I
Sbjct: 209 DAVFQQLHRVGFWQKYKSILVTGAGQPDRATRRFVRRLNEELGLPVYVLTDSDPYGWYIY 268
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG-----LPKNCRLKLTVEG------ 113
+ ++ GS+Q++Y+++ L P+ +LG SD YG L + R ++
Sbjct: 269 SVFKVGSIQLSYESERLATPKAKFLGVSMSDIFGYGRKKPYLTEEERRNYIIKAKDLDIR 328
Query: 114 ---------------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
K EIEA + FL+ +Y+P KIQ
Sbjct: 329 RAKELMNYSWFRTPLWKREIDMFLDKKAKLEIEAMASKGLKFLAFQYLPEKIQ 381
>gi|189237865|ref|XP_001815524.1| PREDICTED: similar to meiotic recombination protein spo11
[Tribolium castaneum]
Length = 380
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 30/163 (18%)
Query: 5 DAVFHRLANDQYCTRNR--CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
+++FH+L + + I+ITG+G PDI+TR FL+ L L+LP F LVD D YG
Sbjct: 213 ESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRLFLKKLSTMLKLPVFVLVDPDLYGIR 272
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL-----------PKNCRLK--- 108
I+ YRFG++ + ++ L +P WLG FPS+ K+G+ N LK
Sbjct: 273 IMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIAKFGIQFQNITQREVKAINETLKYPY 332
Query: 109 -------------LTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L G K IE + +FLSE Y+P K+
Sbjct: 333 MEAHPKIADELNYLLHSGKKGSIEGLVKNN-TFLSEAYLPVKL 374
>gi|194704998|gb|ACF86583.1| unknown [Zea mays]
Length = 212
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 73/170 (42%), Gaps = 78/170 (45%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ VF RLAND++C RNRCIVIT
Sbjct: 88 ETVFQRLANDKFCERNRCIVIT-------------------------------------- 109
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
Q+A+DA LR+P++ WLG F SDFE+Y LP C L+L+ E
Sbjct: 110 --------QLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARC 161
Query: 113 -------------------GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
GVKFEIEA A S SFLS +YIP KI QG++
Sbjct: 162 YLHREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMH 211
>gi|307596127|ref|YP_003902444.1| DNA topoisomerase [Vulcanisaeta distributa DSM 14429]
gi|307551328|gb|ADN51393.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta distributa DSM
14429]
Length = 369
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL + + + C++IT +G PD +TRRF+R L E+ LP + L D DPYG+ I
Sbjct: 201 DAIFQRLNREGFWNKESCLLITAKGMPDRATRRFVRRLNEEYGLPVYVLTDGDPYGWYIY 260
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y++ L PE ++G +D Y + +K T +
Sbjct: 261 SVYKSGSIKLSYESDRLATPEAKFVGVTATDIRTYKISDEYVIKATDRDLKRAQELLRYP 320
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA FL + Y+ KI G
Sbjct: 321 WFQSDHWKKEIELFLRTKKKVEIEALSTHGLRFLHD-YLIDKIHG 364
>gi|325967951|ref|YP_004244143.1| DNA topoisomerase [Vulcanisaeta moutnovskia 768-28]
gi|323707154|gb|ADY00641.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta moutnovskia
768-28]
Length = 369
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL + + + C++IT +G PD +TRRF+R L E+ LP + L D DPYG+ I
Sbjct: 201 DAIFQRLNREGFWNKESCLLITAKGMPDRATRRFVRRLNEEYGLPIYILTDGDPYGWYIY 260
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
+ Y+ GS++++Y++ L PE ++G +D Y + +K T +
Sbjct: 261 SVYKSGSIKLSYESDRLATPEAKFVGVTATDIRTYKISDEYVIKATDRDLKRAQELIRYP 320
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQG 140
K EIEA FL + Y+ KI G
Sbjct: 321 WFQSDHWKKEIELFLRTKKKVEIEALSTHGLRFLHD-YLTDKIHG 364
>gi|392569898|gb|EIW63071.1| DNA topoisomerase IV alpha subunit [Trametes versicolor FP-101664
SS1]
Length = 389
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 5 DAVFHRLANDQYCTR----NRCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
+AVF L + T + +VITG+GYPD++TR+ L L L +P CLVD D
Sbjct: 188 EAVFQTLCRLRLGTHPLLPGKGLVITGKGYPDVATRQLLNALSANLPPHIPILCLVDGDA 247
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
YG DIL+ Y+FGS M ++ L + WLG + S+ G+PK+ + +T
Sbjct: 248 YGIDILSVYKFGSTSMQHEKDQLAAARIQWLGLWSSELAALGIPKDALIPIT 299
>gi|170033806|ref|XP_001844767.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
gi|167874844|gb|EDS38227.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
Length = 411
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
D VF RL D+ R + +++T +GYPD+ TR L+ + R+P F LVD DP+G +
Sbjct: 232 DTVFRRLLEDRILDRMSRKLLLVTSKGYPDVGTRLLLQKIWTTYRIPMFALVDADPFGIE 291
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE------------------------- 97
I Y+FGS+ +++ +++L +P + W+G PS
Sbjct: 292 IYCVYKFGSLALSHQSQYLAVPAIRWIGVRPSHIPLLGLKPLPLNGRDRARIDELLKRPY 351
Query: 98 --KYGLPKNCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
K G L+L E VK EIE+ S +L Y+P++++
Sbjct: 352 IGKAGCELARELRLMSELDVKAEIESLVDISTDYLINDYLPAQLK 396
>gi|242018089|ref|XP_002429514.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
gi|212514456|gb|EEB16776.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
Length = 380
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 28/163 (17%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F L + + + CI+ITG+G+PD++TR + + +KL++P L D DPYGF+I
Sbjct: 213 DASFQTLLDSSAVEKLDSCILITGKGFPDVNTRMLVCKVWQKLQIPILALCDADPYGFEI 272
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE----------------------KYGL 101
+ YRFGS+ M+ A L P + WLG P+D + + +
Sbjct: 273 MCVYRFGSVSMSNLADSLACPSIRWLGIHPNDIKPLLLNSQTLSANDIKKIKNAMNRSYV 332
Query: 102 PKNCRL-----KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
KN L E K EIE S +FL + Y+ +KIQ
Sbjct: 333 QKNFNLINQLQTFLKENRKAEIEEISNISPNFLIDVYLKNKIQ 375
>gi|392865657|gb|EAS31463.2| meiotic recombination protein spo11 [Coccidioides immitis RS]
Length = 383
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLR-----LPTFCLVDC 56
+AVFHRLA Y + I+ITG+GYPD+STR FLR + E +P + LVDC
Sbjct: 207 EAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEWRNSPARFIPIYVLVDC 266
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
DP G I++TY++GS+ +++ L +P + WLG SD
Sbjct: 267 DPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASD 305
>gi|320034211|gb|EFW16156.1| meiosis-specific topoisomerase Spo11 [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLR-----LPTFCLVDC 56
+AVFHRLA Y + I+ITG+GYPD+STR FLR + E +P + LVDC
Sbjct: 207 EAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEWRNSPARFIPIYVLVDC 266
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
DP G I++TY++GS+ +++ L +P + WLG SD
Sbjct: 267 DPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASD 305
>gi|332797101|ref|YP_004458601.1| DNA topoisomerase VI subunit A [Acidianus hospitalis W1]
gi|332694836|gb|AEE94303.1| DNA topoisomerase VI, subunit A [Acidianus hospitalis W1]
Length = 386
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 42/175 (24%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I++T G PD +TRRF+R L E+L+LP + + D DPYG+ I
Sbjct: 208 DAVFQQLHREGFWKKYNAILVTSAGQPDRATRRFVRRLNEELKLPVYIMTDADPYGWYIY 267
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK--------------------N 104
+ +R GS+ ++Y+++ L P +LG D +G PK +
Sbjct: 268 SVFRIGSINLSYESERLATPNARFLGVSMGDI--FGTPKKKAYLTERERNAFIIKAKDYD 325
Query: 105 CRLKLTVEG--------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ L ++ K EIEA + FL+ +YIP KIQ
Sbjct: 326 IKRALEIKNYEWFKTKAWQEEINMFLQKKAKLEIEAMASKGLKFLAFQYIPEKIQ 380
>gi|397618186|gb|EJK64792.1| hypothetical protein THAOC_14439 [Thalassiosira oceanica]
Length = 138
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 30/132 (22%)
Query: 38 FLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE 97
FL + +L++P LVD DPYG IL+ Y GS M+YD+ L P++ WLG PSD
Sbjct: 2 FLSRITSELQIPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLN 61
Query: 98 KYGLPKNCRLKLTVEGVKF------------------------------EIEAFCACSFS 127
+Y LP CRLK+T +K EI+A + F
Sbjct: 62 RYDLPDQCRLKMTENDIKTGKELLQEAFIAKNPLWMKELQIMVKTKEKAEIQALSSFGFQ 121
Query: 128 FLSEKYIPSKIQ 139
+++E+Y+P K++
Sbjct: 122 YITEEYLPRKLR 133
>gi|119183419|ref|XP_001242749.1| hypothetical protein CIMG_06645 [Coccidioides immitis RS]
Length = 354
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLR-----LPTFCLVDC 56
+AVFHRLA Y + I+ITG+GYPD+STR FLR + E +P + LVDC
Sbjct: 178 EAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEWRNSPARFIPIYVLVDC 237
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
DP G I++TY++GS+ +++ L +P + WLG SD
Sbjct: 238 DPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASD 276
>gi|118431159|ref|NP_147432.2| DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
gi|150421694|sp|Q9YE67.2|TOP6A_AERPE RecName: Full=Type II DNA topoisomerase VI subunit A
gi|116062483|dbj|BAA79679.2| type II DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
Length = 389
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 39/174 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + +++TG G PD +TRRF+R L E+L+LP + + D DPYG+ I
Sbjct: 210 DAVFQQLHRAGFWKKYKALLVTGSGQPDRATRRFVRRLHEELKLPVYIITDSDPYGWYIY 269
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKY------------------------- 99
+ Y+ GS+ ++Y+++ L P+ +LG +D Y
Sbjct: 270 SVYKVGSITLSYESERLATPKAKFLGVQMTDIFGYRGKKPYLSEAERKKFMIKATDKDIK 329
Query: 100 ---------GLPKNCRLKLTVE-----GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ KN R + + VK EIEA + F + +YIP KI+
Sbjct: 330 RAKELLNYSWIGKNRRWNVEIRLFLKHLVKLEIEAIASKGLKFFAYQYIPEKIE 383
>gi|270006719|gb|EFA03167.1| hypothetical protein TcasGA2_TC013087 [Tribolium castaneum]
Length = 936
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 5 DAVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
+++FH+L + + I+ITG+G PDI+TR FL+ L L+LP F LVD D YG
Sbjct: 769 ESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRLFLKKLSTMLKLPVFVLVDPDLYGIR 828
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL 101
I+ YRFG++ + ++ L +P WLG FPS+ K+G+
Sbjct: 829 IMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIAKFGI 867
>gi|124027834|ref|YP_001013154.1| DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM 5456]
gi|166229996|sp|A2BLE8.1|TOP6A_HYPBU RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|123978528|gb|ABM80809.1| Type II DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM
5456]
Length = 387
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 38/173 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + ++R I+IT G PD +TRRF+R L E+L LP + L D DPYG+ I
Sbjct: 209 DAVFQQLHRIGFWKKHRAILITSAGQPDRATRRFVRRLNEELGLPVYILTDADPYGWYIY 268
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD----------------------------- 95
+ ++ GS+ ++Y+++ L P ++G +D
Sbjct: 269 SVFKIGSITLSYESERLATPNARFIGVSMTDIFGYKSKKPYLTEQERRNFIIKAKEADIK 328
Query: 96 --FE----KYGLPKNCRLKLTV---EGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+E K+ K ++++ + + K EIEA + FL++KY+P KI+
Sbjct: 329 RAYELKNYKWFQTKKWQIEIDIFLEKKAKLEIEAMTSKGLRFLADKYLPEKIE 381
>gi|323139266|ref|ZP_08074320.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
gi|322395487|gb|EFX98034.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
Length = 377
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 31/167 (18%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL N ++ RC+++ G P +TRRF+RLL ++ LP +C VDCDPYGF +I
Sbjct: 206 GMFQRLNNHRFWESARCVIVEMGGVPTRATRRFIRLLSDRHDLPVYCFVDCDPYGFTNIY 265
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP-----------KNCRLKLTVE- 112
T + GS A+ +FL +P +LG P D +GL K + L+ +
Sbjct: 266 RTLKAGSGNAAHVNRFLCVPRARFLGVTPQDIIDFGLQDATHPLTPVDVKRAKDALSNDP 325
Query: 113 ------------------GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
GV+ E +A +++ ++Y+P K+ V
Sbjct: 326 FIIAHPQWTAAIRQLLDMGVRAEQQALAKWGLNYVIDEYLPRKLSDV 372
>gi|268536302|ref|XP_002633286.1| C. briggsae CBR-SPO-11 protein [Caenorhabditis briggsae]
Length = 381
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 37/202 (18%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D +F +L ++ + R I++T +GYPDI+TR L++ E+ P + L D DP+G +I
Sbjct: 159 DTIFQKLKDEDFQKMFPRGILVTSKGYPDIATRNVLKMFGERKNFPIYGLFDADPHGIEI 218
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT------VEG---- 113
TY++G+ + + + +P + W+G FP+DF+ + + K+ +L L +E
Sbjct: 219 YLTYKYGATKETAEGRGAFVPSIQWIGLFPTDFKNFFIDKSQQLPLIRSDYVKIENLIPR 278
Query: 114 --------------------VKFEIEAFCACSFSFLSEKYIPSKIQGVYSVVID------ 147
+KFE+E+ C ++ I +++ V ++D
Sbjct: 279 SIQLGEISVTRELDYMIQNPLKFELESINMCGPEYMGRYLIAPRVKKVEKKIMDPIEEVE 338
Query: 148 AEKGTVNISGKVNPNTMLRILD 169
AE+G+++ + NT LD
Sbjct: 339 AEQGSLDSQLSFDANTSDEDLD 360
>gi|119498739|ref|XP_001266127.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
gi|119414291|gb|EAW24230.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
Length = 391
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 14/119 (11%)
Query: 5 DAVFHRLANDQYCTR---NRCIVITGRGYPDISTRRFLRLLIEKLR-LPT------FCLV 54
+AV+ RL+ Y TR + +++TG+GYPD+STR F+R L+++ R LP + LV
Sbjct: 210 EAVYRRLSRSSYHTRAAAGKGVLVTGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALV 269
Query: 55 DCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF----EKYGLPKNCRLKL 109
D DP G I++TY++GSM A D + L + ++ WLG SD + +G RL L
Sbjct: 270 DSDPDGMAIMSTYKYGSMAHARDNEKLNVSKLRWLGLRTSDVIGGADSFGDEAFIRLSL 328
>gi|283778748|ref|YP_003369503.1| DNA topoisomerase [Pirellula staleyi DSM 6068]
gi|283437201|gb|ADB15643.1| DNA topoisomerase (ATP-hydrolyzing) [Pirellula staleyi DSM 6068]
Length = 384
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D V+ R D++ ++ CI+ G G P RR L L +L+LP +CL+D DP+G+ I
Sbjct: 214 DTVWQRFNEDKFWLKHNCILTHGAGQPPRGVRRMLYRLHNELKLPVYCLLDNDPWGYYIY 273
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------ 112
+ + GS+ +AY+++ + IP +LG D+++ GL + ++KL +
Sbjct: 274 SVIKQGSINLAYESERMAIPGARYLGLRSLDYDRCGLSSSVKIKLNDQDIKRAKQIASYP 333
Query: 113 ------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K E+E+ + S+++E+Y+P ++
Sbjct: 334 WFIKKKAWQKEIEMMLKNGFKLEVESLISKDISYVTEEYVPELLE 378
>gi|385805793|ref|YP_005842191.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
gi|383795656|gb|AFH42739.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
Length = 453
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 59/91 (64%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L Y N+ I++T G PD +TRRF+R L E+L+LP + L D DPYGF I
Sbjct: 206 DAVFQQLHRFGYWKANKAILVTSAGQPDRATRRFVRRLNEELKLPVYILADSDPYGFYIY 265
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ ++ GS+ ++Y+++ L P+ +LG SD
Sbjct: 266 SVFKIGSITLSYESERLATPKARFLGVTMSD 296
>gi|194755593|ref|XP_001960068.1| GF11715 [Drosophila ananassae]
gi|190621366|gb|EDV36890.1| GF11715 [Drosophila ananassae]
Length = 330
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 29/144 (20%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR L L E+ LP + LVD DP+G +I+ YR GS M++ ++
Sbjct: 186 RFILITGKGYPDCCTRRILHRLTEENHLPAYILVDADPFGIEIMLVYRHGSQAMSFSSRG 245
Query: 81 LRIPEMHWLGAFPSD----------------------FEKYGLPKNCRLKLTV---EGVK 115
P + W+G PS+ + GL R +L + +K
Sbjct: 246 YTTPSLRWIGLHPSEIAALGGGAVALGTGDNKKINDLLARSGLEAGVRQELRMLREVQLK 305
Query: 116 FEIEAFCACSFSFLSEKYIPSKIQ 139
EIE+ FLSE YIP+KI+
Sbjct: 306 AEIESV----ICFLSEDYIPNKIK 325
>gi|339251714|ref|XP_003372879.1| carboxypeptidase B [Trichinella spiralis]
gi|316968726|gb|EFV52961.1| carboxypeptidase B [Trichinella spiralis]
Length = 827
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D++F +LA ++ + R I++T +GYPD TR FLR L + L+LP F L+D DP G +I
Sbjct: 580 DSIFEKLAMEKANSVLRSAILVTAKGYPDFPTRLFLRKLYDYLKLPMFALMDADPCGIEI 639
Query: 64 LTTYRFGSMQMAYDAKF-LRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKF 116
TY++G M ++Y++ + +P M W+G +PS+ L +L L + K
Sbjct: 640 FLTYKYGPMNVSYESGVNVLLPWMKWIGVYPSEISSLNLSDTQKLMLGIRERKL 693
>gi|195150845|ref|XP_002016361.1| GL10528 [Drosophila persimilis]
gi|194110208|gb|EDW32251.1| GL10528 [Drosophila persimilis]
Length = 333
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 32/156 (20%)
Query: 11 LANDQYCT-RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
LA D + T RCI++TG+GYPD STRR L L + LP + LVD DP+G +I+ YR
Sbjct: 178 LARDLFGTFGRRCILVTGKGYPDCSTRRILHRLSTECHLPAYILVDADPFGIEIMLVYRL 237
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPS--------------------------DFEKYGLPK 103
GS M++ + L P + W+G PS D+ G+ +
Sbjct: 238 GSQSMSFTSGDLATPTLRWIGLHPSEIPALSSGAVALSSGDNKKIDDILARDYIGPGVRQ 297
Query: 104 NCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
R ++ K EIE+ FLS YIP+KI
Sbjct: 298 ELRSLQQIQQ-KAEIESV----IDFLSTDYIPNKIN 328
>gi|15897848|ref|NP_342453.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus P2]
gi|284175657|ref|ZP_06389626.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus 98/2]
gi|384434402|ref|YP_005643760.1| DNA topoisomerase [Sulfolobus solfataricus 98/2]
gi|13814151|gb|AAK41243.1| DNA topoisomerase VI subunit A (top6A) [Sulfolobus solfataricus P2]
gi|261602556|gb|ACX92159.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus solfataricus 98/2]
Length = 389
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 38/172 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 211 DAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIF 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF---------------EKYGL-PKNCRLK 108
+ +R GS+ ++Y+++ L P+ +LG SD + Y + K +K
Sbjct: 271 SVFRIGSISLSYESERLATPDAKFLGVSMSDIFGNSRKKPYLSEAERKNYIIKAKEADIK 330
Query: 109 LTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
E K EIEA + FL+ +YIP KI
Sbjct: 331 RAEEIKNYEWFKTKAWEEEINTFLHRKAKLEIEAMASKGLKFLAFQYIPEKI 382
>gi|308491496|ref|XP_003107939.1| CRE-SPO-11 protein [Caenorhabditis remanei]
gi|308249886|gb|EFO93838.1| CRE-SPO-11 protein [Caenorhabditis remanei]
Length = 448
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D F +L ++++ R I++T +GYPDISTR L++L EK +LP + L D DP+G +I
Sbjct: 218 DTTFQKLIDEKFQIMFPRGILVTSKGYPDISTRNVLKMLSEKRKLPIYGLFDADPHGIEI 277
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL-PKNCRLKLTVEGVKFE 117
TY++G+ + + + + + W+G FP+DF+++ + P C L + VK E
Sbjct: 278 YLTYKYGAAKETAEGRGAFVSSIQWIGLFPTDFKRFFIDPSQCLPLLRSDFVKIE 332
>gi|198457624|ref|XP_002138430.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
gi|198136050|gb|EDY68988.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
Length = 333
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 32/156 (20%)
Query: 11 LANDQYCT-RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
LA D + T RCI++TG+GYPD STRR L L + LP + LVD DP+G +I+ YR
Sbjct: 178 LARDLFGTFGRRCILVTGKGYPDCSTRRILHRLSTECHLPAYILVDADPFGIEIMLVYRL 237
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPS--------------------------DFEKYGLPK 103
GS M++ + L P + W+G PS D+ G+ +
Sbjct: 238 GSQSMSFTSGDLATPTLRWIGLHPSEIPALSSGAVALSSGDNKKIDDILARDYIGPGVRQ 297
Query: 104 NCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
R ++ K EIE+ FLS YIP+KI
Sbjct: 298 ELRSLQQIQQ-KAEIESV----IDFLSTDYIPNKIN 328
>gi|305662509|ref|YP_003858797.1| DNA topoisomerase [Ignisphaera aggregans DSM 17230]
gi|304377078|gb|ADM26917.1| DNA topoisomerase (ATP-hydrolyzing) [Ignisphaera aggregans DSM
17230]
Length = 392
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 40/175 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + R + I++T G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 212 DAVFQQLHRAGFWKRYKAILVTSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIY 271
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD----------------------------- 95
+ +R GS+ ++Y+++ L P +LG SD
Sbjct: 272 SVFRIGSITLSYESERLATPSAKFLGVSMSDIFGDKTTGKKPYLTESERKNFIIKAKKTD 331
Query: 96 ---------FEKYGLPKNCR-LKLTVEG-VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+E + K R + + +E K EIEA FL + YIP+KI+
Sbjct: 332 IKRAQELLNYEWFKTEKWTREINMFLEKQSKLEIEALTGKGLYFLMDNYIPTKIE 386
>gi|3024738|sp|O05208.1|TOP6A_SULSH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|167745000|pdb|2ZBK|A Chain A, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745002|pdb|2ZBK|C Chain C, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745004|pdb|2ZBK|E Chain E, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745006|pdb|2ZBK|G Chain G, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|1926404|emb|CAA71605.1| type II DNA topoisomerase subunit A [Sulfolobus shibatae B12]
Length = 389
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 38/172 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 211 DAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIF 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG---------------------------AFPSDFE 97
+ +R GS+ ++Y+++ L P+ +LG A +D +
Sbjct: 271 SVFRIGSISLSYESERLATPDAKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKAKDADIK 330
Query: 98 KYGLPKN---CRLKLTVEGV--------KFEIEAFCACSFSFLSEKYIPSKI 138
+ KN + K E + K EIEA + FL+ +YIP KI
Sbjct: 331 RAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKI 382
>gi|347832663|emb|CCD48360.1| hypothetical protein [Botryotinia fuckeliana]
Length = 496
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 5 DAVFHRLAND---QYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYG 60
+A F LA +Y T R I++T +GYPDI +R+FL L + +P + LVD DP G
Sbjct: 327 EATFRTLAEKRYWEYSTAGRGILLTAKGYPDIQSRQFLHYLAKHYPMVPIYALVDFDPDG 386
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
I++TY+ GS+ +A++ + L +P MHWLG D + G LKLT
Sbjct: 387 IGIMSTYKHGSVALAHENEGLSVPFMHWLGLRSKDMMQGGKENEGLLKLT 436
>gi|227827527|ref|YP_002829307.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.14.25]
gi|229579029|ref|YP_002837427.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.G.57.14]
gi|229584730|ref|YP_002843232.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.27]
gi|238619684|ref|YP_002914510.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.4]
gi|284997637|ref|YP_003419404.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
gi|227459323|gb|ACP38009.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.14.25]
gi|228009743|gb|ACP45505.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.G.57.14]
gi|228019780|gb|ACP55187.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.27]
gi|238380754|gb|ACR41842.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.4]
gi|284445532|gb|ADB87034.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
Length = 389
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 38/172 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 211 DAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIF 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG---------------------------AFPSDFE 97
+ +R GS+ ++Y+++ L P+ +LG A +D +
Sbjct: 271 SVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKAKDADIK 330
Query: 98 KYGLPKN---CRLKLTVEGV--------KFEIEAFCACSFSFLSEKYIPSKI 138
+ KN + K E + K EIEA + FL+ +YIP KI
Sbjct: 331 RAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKI 382
>gi|385773196|ref|YP_005645762.1| DNA topoisomerase [Sulfolobus islandicus HVE10/4]
gi|385775830|ref|YP_005648398.1| DNA topoisomerase [Sulfolobus islandicus REY15A]
gi|323474578|gb|ADX85184.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus REY15A]
gi|323477310|gb|ADX82548.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus HVE10/4]
Length = 389
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 38/172 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 211 DAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIF 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG---------------------------AFPSDFE 97
+ +R GS+ ++Y+++ L P+ +LG A +D +
Sbjct: 271 SVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKAKDADIK 330
Query: 98 KYGLPKN---CRLKLTVEGV--------KFEIEAFCACSFSFLSEKYIPSKI 138
+ KN + K E + K EIEA + FL+ +YIP KI
Sbjct: 331 RAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKI 382
>gi|227830214|ref|YP_002831994.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus L.S.2.15]
gi|227456662|gb|ACP35349.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
L.S.2.15]
Length = 389
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 38/172 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 211 DAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIF 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG---------------------------AFPSDFE 97
+ +R GS+ ++Y+++ L P+ +LG A +D +
Sbjct: 271 SVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKAKDADIK 330
Query: 98 KYGLPKN---CRLKLTVEGV--------KFEIEAFCACSFSFLSEKYIPSKI 138
+ KN + K E + K EIEA + FL+ +YIP KI
Sbjct: 331 RAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKI 382
>gi|409044860|gb|EKM54341.1| hypothetical protein PHACADRAFT_96783, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 390
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
+AVF L +R ++ITG+GYPD++TR+ +R L + L +P LVDCDP
Sbjct: 183 EAVFQTLCRLNLAEHSRLPGPGLLITGKGYPDVATRQLVRTLSDNLPAAVPIISLVDCDP 242
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
+G DIL+ Y++GS M ++ K L + W G D GL K+ L +T
Sbjct: 243 WGIDILSVYKYGSASMVHEHKSLVASRIVWGGVRGEDISLLGLNKDAMLPIT 294
>gi|87306802|ref|ZP_01088948.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
gi|87290175|gb|EAQ82063.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
Length = 389
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 30/165 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D V+ R D++ ++ CI+ G G P RR L L +L+LP +C+ D DP+G+ I
Sbjct: 219 DTVWQRFNEDKFWKKHNCILTHGSGQPPRGVRRLLHRLHNELKLPIYCVFDNDPWGYYIY 278
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL----------------- 107
+ + GS+ +AY++K + +PE +LG D+E+ L + ++
Sbjct: 279 SVIKQGSINLAYESKRMAVPEAKFLGLRAIDYERCNLNPSVQIALNDTDRKRAKQIAKYP 338
Query: 108 -------------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
KL G K E+EA + S++++ Y+P +++
Sbjct: 339 WFEQKKTWQKEIQKLLDNGFKLEVEALISQGLSYVTDVYVPERLE 383
>gi|296808905|ref|XP_002844791.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
gi|238844274|gb|EEQ33936.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
Length = 387
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 19/111 (17%)
Query: 5 DAVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLLIEK---------------- 45
+AV+HRL Y I++TG+GYPD+S+R FLRLL +
Sbjct: 197 EAVYHRLVTSGYHKSSVAGNGILLTGKGYPDVSSREFLRLLSQSSNQESSFNLLAANPAF 256
Query: 46 LRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LP + LVD DP G I++TY++GSM + +L +P + W+G + S+
Sbjct: 257 ASLPVYILVDSDPDGMAIMSTYKYGSMAQVHQNAYLNVPSIQWIGLYASEM 307
>gi|15921561|ref|NP_377230.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
gi|22654151|sp|Q971T1.1|TOP6A_SULTO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|15622347|dbj|BAB66339.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
Length = 387
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 38/174 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I++T G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 209 DAVFQQLHRAGFWKQYKAILVTSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIY 268
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF---------------EKYGL-PKNCRLK 108
+ +R GS+ ++Y+++ L P +LG +D Y + K+ +K
Sbjct: 269 SVFRIGSISLSYESERLATPNAKFLGVSMTDIFGDSNKKPYLSEQERRNYIIKAKDADIK 328
Query: 109 LTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
E K EIEA + FL+ +YIP KI+
Sbjct: 329 RATEIKNYQWFKTKAWQHEIEIFLNKKSKLEIEAMASKGLKFLAFQYIPEKIKS 382
>gi|194881359|ref|XP_001974815.1| GG21975 [Drosophila erecta]
gi|190658002|gb|EDV55215.1| GG21975 [Drosophila erecta]
Length = 331
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 31/147 (21%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD STRR + L E+ +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCSTRRIVHRLAEENQLAAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPS---------------DFEKY-----------GLPKNCRLKLTVE 112
+ L P + W+G PS D +K G+ + R+ V+
Sbjct: 245 QGLTTPALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDLEPGVRQELRMLQDVQ 304
Query: 113 GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EIE+ FL++ YIP+KI
Sbjct: 305 -LKAEIESV----IDFLTDDYIPNKIN 326
>gi|308452846|ref|XP_003089203.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
gi|308241650|gb|EFO85602.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
Length = 458
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D F +L ++++ R I++T +GYPDISTR L++L EK + P + L D DP+G +I
Sbjct: 228 DTTFQKLIDEKFQIMFPRGILVTSKGYPDISTRNVLKMLSEKRKFPIYGLFDADPHGIEI 287
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL-PKNCRLKLTVEGVKFE 117
TY++G+ + + + + + W+G FP+DF+++ + P C L + VK E
Sbjct: 288 YLTYKYGAAKETAEGRGAFVSSIQWIGLFPTDFKRFFIDPSQCLPLLRSDFVKIE 342
>gi|229582220|ref|YP_002840619.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.N.15.51]
gi|228012936|gb|ACP48697.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.N.15.51]
Length = 389
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 38/172 (22%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 211 DAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIF 270
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG---------------------------AFPSDFE 97
+ +R GS+ ++Y+++ L P+ +LG A +D +
Sbjct: 271 SVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKAKDADIK 330
Query: 98 KYGLPKN---CRLKLTVEGV--------KFEIEAFCACSFSFLSEKYIPSKI 138
+ KN + K E + K EIEA + FL +YIP KI
Sbjct: 331 RAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLGFQYIPEKI 382
>gi|303319823|ref|XP_003069911.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109597|gb|EER27766.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 370
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLR-----LPTFCLVDC 56
+AVFH LA Y + I+ITG+GYPD+STR FLR + E +P + LVDC
Sbjct: 194 EAVFHCLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEWRNSPARFIPIYVLVDC 253
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
DP G I++TY++GS+ +++ L +P + WLG SD
Sbjct: 254 DPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASD 292
>gi|70607073|ref|YP_255943.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449067312|ref|YP_007434394.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449069582|ref|YP_007436663.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
gi|68567721|gb|AAY80650.1| DNA topoisomerase VI, subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449035820|gb|AGE71246.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449038090|gb|AGE73515.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
Length = 386
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 38/174 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I++T G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 208 DAVFQQLHRAGFWKQYKAILVTSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIY 267
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGA-------------FPSDFEKYGL---PKNCRLK 108
+ ++ GS+ ++Y+++ L P +LG + SD E+ K+ +K
Sbjct: 268 SVFKIGSISLSYESERLATPNARFLGVSMTDIFGDKGKKPYLSDQERRNYIIKAKDADVK 327
Query: 109 LTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
+E K EIEA + FL+ +YIP KI+
Sbjct: 328 RAMEIKNYEWFKTKGWQHEISVFLDKKSKLEIEAMASKGLRFLAFQYIPEKIKN 381
>gi|395332754|gb|EJF65132.1| topoisomerase acting in meiosis [Dichomitus squalens LYAD-421 SS1]
Length = 342
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
+AVF L + T +++TG+GYPD++TR+ ++ L + L R+P LVD D
Sbjct: 134 EAVFQTLCRLRLATHETLPGSGLIVTGKGYPDVATRQLVKTLADNLPARVPILALVDGDA 193
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
YG DIL+ Y+ GS +M ++ L + WLG + S+ G+ K+ L +T
Sbjct: 194 YGIDILSVYKHGSTRMRHENSHLAADRVQWLGLWASELASLGIDKDALLPIT 245
>gi|341880355|gb|EGT36290.1| hypothetical protein CAEBREN_32646 [Caenorhabditis brenneri]
Length = 426
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D F +L ++ + R I++T +GYPDI+TR +++L +K + P + L D DP+G +I
Sbjct: 191 DTTFQKLIDENFQQMFPRGILVTSKGYPDIATRNVIKMLSDKKKFPIYGLFDADPHGIEI 250
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKL 109
TY++G+++ + + + +P + W+G FP+D+ ++ + + LKL
Sbjct: 251 YLTYKYGAIKESAEGRGAFVPSIQWIGLFPTDYNRFIIDRTQCLKL 296
>gi|341880361|gb|EGT36296.1| hypothetical protein CAEBREN_28993 [Caenorhabditis brenneri]
Length = 429
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D F +L ++ + R I++T +GYPDI+TR +++L +K + P + L D DP+G +I
Sbjct: 191 DTTFQKLIDENFQQMFPRGILVTSKGYPDIATRNVIKMLSDKKKFPIYGLFDADPHGIEI 250
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKL 109
TY++G+++ + + + +P + W+G FP+D+ ++ + + LKL
Sbjct: 251 YLTYKYGAIKESAEGRGAFVPSIQWIGLFPTDYNRFIIDQTQCLKL 296
>gi|409075163|gb|EKM75546.1| hypothetical protein AGABI1DRAFT_79675 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 5 DAVFHRLANDQYCTRN----RCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
+AVF L+N + + R ++ITG+GYPDI+TR ++ L + L R+P LVD DP
Sbjct: 146 EAVFQTLSNLEITNSHDFPGRGLLITGKGYPDIATRHLVKTLADCLPPRIPIMALVDGDP 205
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPE-MHWLGAFPSDFEKYGLPKN 104
YG DIL+ YR+GS + ++ + L + + W+G + S+F G+ K+
Sbjct: 206 YGLDILSVYRYGSRALKHENERLAAGDRVVWIGIWASEFSSLGIDKD 252
>gi|347523834|ref|YP_004781404.1| DNA topoisomerase [Pyrolobus fumarii 1A]
gi|343460716|gb|AEM39152.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrolobus fumarii 1A]
Length = 388
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 38/173 (21%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + R I++T G PD +TRRF+R L E+L LP + L D DPYG+ I
Sbjct: 210 DAVFQQLHRIGFWRKYRAILVTSAGQPDRATRRFVRRLNEELGLPVYILTDADPYGWYIY 269
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF-------------EKYGL---PKNCRLK 108
+ ++ GS+ ++Y+++ L P+ +LG +D E+ K+ +K
Sbjct: 270 SVFKIGSITLSYESERLATPKARFLGVSMTDIFGDERKKPYLTETERRNFIIKAKDADIK 329
Query: 109 LTVE----------------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
E K EIEA FL+ KYIP KI+
Sbjct: 330 RAEELRNYKWFQTPQWRKEIDIFLRKKAKLEIEALAGKGLRFLAFKYIPEKIE 382
>gi|357139785|ref|XP_003571458.1| PREDICTED: meiotic recombination protein SPO11-2-like [Brachypodium
distachyon]
Length = 382
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DAVF RLA D+ + CIVIT +GYPDI+TR L L + +P F LVD +P G I
Sbjct: 218 DAVFQRLAEDRLYNQLPCIVITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAI 277
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE-----------------KYGLPKN-- 104
L TY++GS+ M ++ + + WLG D E GL +
Sbjct: 278 LCTYKYGSISMGLES-YRYACNVKWLGIRGDDLELIPQSAFQELKPRDLQIAKGLMSSKF 336
Query: 105 ------CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L L VE G + EIEA F FL KYI KI QG Y
Sbjct: 337 LQDKHRAELALMVEMGKRAEIEALYCHGFDFLG-KYIARKIVQGDY 381
>gi|195335887|ref|XP_002034594.1| GM21963 [Drosophila sechellia]
gi|195359309|ref|XP_002045345.1| GM13291 [Drosophila sechellia]
gi|194126564|gb|EDW48607.1| GM21963 [Drosophila sechellia]
gi|194129425|gb|EDW51468.1| GM13291 [Drosophila sechellia]
Length = 331
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 31/147 (21%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPS---------------DFEKY-----------GLPKNCRLKLTVE 112
+ L P + W+G PS D +K G+ + R+ V+
Sbjct: 245 QELTTPALRWIGLHPSEIPALGTGVVALVAGDNKKINDLLARHNLEPGVRQELRMLQDVQ 304
Query: 113 GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EIE+ FL++ YIP+KI
Sbjct: 305 -LKAEIESV----IDFLTDDYIPNKIN 326
>gi|403366622|gb|EJY83114.1| DNA topoisomerase VI, subunit A [Oxytricha trifallax]
Length = 314
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 5 DAVFHRLANDQYCTRNR--CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFD 62
D VF RL QY +NR +++TG+GYPD +T+RF+++L + LP L D D +G D
Sbjct: 119 DTVFSRLTQQQYFIQNREHILLLTGKGYPDYATKRFVKMLSQIAHLPILYLGDADSFGAD 178
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF---EKYGLPKNCRLKL 109
I Y FG+ + D + P + W+G F DF +K L + +LK+
Sbjct: 179 IYFQYAFGNQNSSVDQDDINCPLIQWIGPFMQDFKDIKKQDLSEKDKLKI 228
>gi|195584887|ref|XP_002082235.1| GD11457 [Drosophila simulans]
gi|194194244|gb|EDX07820.1| GD11457 [Drosophila simulans]
Length = 331
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 31/147 (21%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTEENQLEAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPS---------------DFEKY-----------GLPKNCRLKLTVE 112
+ L P + W+G PS D +K G+ + R+ V+
Sbjct: 245 QGLTTPALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHNLEPGVRQELRMLQDVQ 304
Query: 113 GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EIE+ FL++ YIP+KI
Sbjct: 305 -LKAEIESV----IDFLTDDYIPNKIN 326
>gi|195382444|ref|XP_002049940.1| GJ20469 [Drosophila virilis]
gi|194144737|gb|EDW61133.1| GJ20469 [Drosophila virilis]
Length = 349
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 29/144 (20%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I++TG+GYPD +TRR + L + LP + LVD DP+G +I+ TYR GS M++ +K
Sbjct: 205 RFILLTGKGYPDCTTRRIVHRLSVECNLPAYILVDADPFGIEIMLTYRHGSQAMSFSSKS 264
Query: 81 LRIPEMHWLGAFPSDFE----------KYGLPK------------NCRLKL-TVEGVKF- 116
L P + WLG PS+ + KY K R +L T++ ++F
Sbjct: 265 LATPMLRWLGLHPSEIDSISKRAVALTKYDNKKILDILSRSYISLGVRQELQTLQRIQFK 324
Query: 117 -EIEAFCACSFSFLSEKYIPSKIQ 139
EIE+ FLS YIP+KI
Sbjct: 325 AEIESV----IDFLSPYYIPTKIN 344
>gi|401398583|ref|XP_003880351.1| unnamed protein product [Neospora caninum Liverpool]
gi|325114761|emb|CBZ50317.1| unnamed protein product [Neospora caninum Liverpool]
Length = 340
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 33/165 (20%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTF-C--LVDCDPYGF 61
DAVF L Q CI+ITG+G+PD +TR+ LR L L + +F C + D DP+G
Sbjct: 172 DAVFQTLCEQQIWNIIPCILITGKGFPDFATRKLLRHLQMSLNIESFQCGYVGDFDPHGI 231
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP------------------- 102
I +Y++GS A++ +R +HW+G D ++ L
Sbjct: 232 SIFLSYQYGS--KAFEGPLVRCAVLHWIGLCSEDLKQLPLDVRLCLLNRDRALLKSLLVH 289
Query: 103 ---KNC-RLK-----LTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+NC RLK + KFEIEA + F +L+ YIPSKI
Sbjct: 290 PKIRNCERLKEQCLFMMEHDTKFEIEAITSLGFDYLARYYIPSKI 334
>gi|296242524|ref|YP_003650011.1| DNA topoisomerase [Thermosphaera aggregans DSM 11486]
gi|296095108|gb|ADG91059.1| DNA topoisomerase (ATP-hydrolyzing) [Thermosphaera aggregans DSM
11486]
Length = 434
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + +N+ I++T G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 205 DAVFQQLHRYGFWRKNKAILVTSAGQPDRATRRFVRRLNEELKLPVYVLADSDPYGYYIY 264
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ ++ GS+ ++Y+++ L P ++G +D
Sbjct: 265 SVFKIGSITLSYESERLATPGAKFIGVMMTD 295
>gi|317032060|ref|XP_001393922.2| meiotic recombination protein spo11 [Aspergillus niger CBS 513.88]
Length = 395
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 8/94 (8%)
Query: 5 DAVFHRLANDQYCTRN---RCIVITGRGYPDISTRRFLRLLIEKLRLPT-----FCLVDC 56
+AV+ RLA+ Y R+ + +++TG+GYPD+STR F+R L + T + LVD
Sbjct: 212 EAVYRRLASSNYHIRSAAGKGVLVTGKGYPDLSTRAFVRKLFDHSHQLTKKPQFYALVDG 271
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
DP G I+ TY++GS+ A++ + L +P +HWLG
Sbjct: 272 DPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLG 305
>gi|428167303|gb|EKX36265.1| meiosis-specific transesterase [Guillardia theta CCMP2712]
Length = 410
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFL-RLLIEKLRLPTFCLVDCDPYGFDI 63
+ +F RL + R I++TG GYPD+ TR L RL LP + + D DP G +I
Sbjct: 231 ECIFRRLCD------GRAILLTGCGYPDVQTRILLSRLSKSHPNLPIYGIADWDPDGVEI 284
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
+ TY FGS ++ +FLR P M WLG +D + +G+PK RL+L+
Sbjct: 285 ILTYAFGSHSREHEREFLRCPTMRWLGLHSNDMKVFGVPKALRLELS 331
>gi|320101390|ref|YP_004176982.1| DNA topoisomerase [Desulfurococcus mucosus DSM 2162]
gi|319753742|gb|ADV65500.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus mucosus DSM
2162]
Length = 434
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + +N+ I+IT G PD +TRRFLR L ++ LP + L D DPYGF I
Sbjct: 205 DAVFQQLHRYGFWKKNKAILITSAGQPDRATRRFLRRLSDEYNLPVYILTDSDPYGFYIY 264
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ ++ GS+ ++Y+++ L P ++G +D
Sbjct: 265 SVFKIGSITLSYESERLATPRAKFIGVMMTD 295
>gi|45552753|ref|NP_995901.1| meiotic W68 [Drosophila melanogaster]
gi|3599483|gb|AAC61735.1| MEI-W68 [Drosophila melanogaster]
gi|7302468|gb|AAF57553.1| meiotic W68 [Drosophila melanogaster]
gi|289666809|gb|ADD16459.1| RT05903p [Drosophila melanogaster]
Length = 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPS---------------DFEKY-----------GLPKNCRLKLTVEGV 114
L P + W+G PS D +K G+ + R+ V+ +
Sbjct: 247 LTTPALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDLEPGVRQELRMLQDVQ-L 305
Query: 115 KFEIEAFCACSFSFLSEKYIPSKIQ 139
K EIE+ FL++ YIP+KI
Sbjct: 306 KAEIESV----IDFLTDDYIPNKIN 326
>gi|297527444|ref|YP_003669468.1| DNA topoisomerase [Staphylothermus hellenicus DSM 12710]
gi|297256360|gb|ADI32569.1| DNA topoisomerase (ATP-hydrolyzing) [Staphylothermus hellenicus DSM
12710]
Length = 445
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 212 DAVFQQLHRHGFWKKQKAILITSAGQPDRATRRFVRRLNEELKLPIYILADADPYGWYIY 271
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ ++ GS+ ++Y+++ L P ++G +D
Sbjct: 272 SVFKIGSITLSYESERLATPSAKFIGVTMTD 302
>gi|315048665|ref|XP_003173707.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
gi|311341674|gb|EFR00877.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
Length = 387
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 5 DAVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLLIEKLR---------LPTFC 52
+AVFHRL Y I++TG+GYPD+S+R FLRLL + LP F
Sbjct: 204 EAVFHRLITSGYHNTSAAGNGILLTGKGYPDLSSREFLRLLSSQKGCNSKIVSNPLPIFI 263
Query: 53 LVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC 105
LVD DP G I++TY++GSM + L +P + W+G S+ P+N
Sbjct: 264 LVDRDPDGMAIMSTYKYGSMAQLHRNANLNVPSIRWVGLQASEMISTVHPRNT 316
>gi|389860616|ref|YP_006362856.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
gi|388525520|gb|AFK50718.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
Length = 430
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + R I++T G PD +TRRF+R L E+L+LP + L D DPYGF I
Sbjct: 204 DAVFQQLHRYGFWRKYRAILVTSAGQPDRATRRFVRRLNEELKLPVYVLTDSDPYGFYIY 263
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ ++ GS+ ++Y+++ L P ++G +D
Sbjct: 264 SVFKIGSITLSYESERLATPNARFIGVSMTD 294
>gi|350640202|gb|EHA28555.1| Hypothetical protein ASPNIDRAFT_189316 [Aspergillus niger ATCC
1015]
Length = 326
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 5 DAVFHRLANDQYCTRN---RCIVITGRGYPDISTRRFLRLLIEKLRLPT-----FCLVDC 56
+AV+ RLA+ Y R+ + +++TG+GYPD+STR F+R L + T + VD
Sbjct: 143 EAVYRRLASSNYHIRSAAGKGVLVTGKGYPDLSTRAFVRKLFDHSHQLTKRPQFYAFVDG 202
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
DP G I+ TY++GS+ A++ + L +P +HWLG +D
Sbjct: 203 DPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLAD 241
>gi|17542064|ref|NP_502081.1| Protein SPO-11 [Caenorhabditis elegans]
gi|3025217|sp|Q22236.1|SPO11_CAEEL RecName: Full=Meiotic recombination protein spo-11
gi|3879464|emb|CAA92974.1| Protein SPO-11 [Caenorhabditis elegans]
Length = 425
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
D F +L ++ + R I+ T +GYPDI+TR L++L EK + P + L D DP+G +I
Sbjct: 204 DTTFQKLMDENFQAMFPRGILATSKGYPDIATRNVLKMLSEKRKFPIYGLFDADPHGIEI 263
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
TY++G + + + +P + W+G FP+DF ++ + ++
Sbjct: 264 YLTYKYGPTKEFAEGRGAFVPTIEWIGLFPTDFHRFTIDQS 304
>gi|327300939|ref|XP_003235162.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
gi|326462514|gb|EGD87967.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
Length = 387
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 5 DAVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLLIEKLR---------LPTFC 52
+AVFHRL Y I++TG+GYPD+S+R FLRLL LP F
Sbjct: 204 EAVFHRLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMIFNPLPIFI 263
Query: 53 LVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LVD DP G I++TY++GSM + L +P + W+G S+
Sbjct: 264 LVDSDPDGMAIMSTYKYGSMAQVHRNADLNVPSIQWVGLQASEM 307
>gi|324518385|gb|ADY47088.1| Meiotic recombination protein spo-11, partial [Ascaris suum]
Length = 388
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F +L + + +R I++TG+GYPDISTR+FL+ L ++P F L+D DP+G +I
Sbjct: 184 DATFQKLIQEGFLSRFSPAILVTGKGYPDISTRKFLKHLTSTYQMPLFGLMDSDPHGIEI 243
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
TY++G + + L +P W+G S+ +Y +P+
Sbjct: 244 AMTYKYGGRMKSAEVGELSLPNFIWIGLSRSEICRYPVPRE 284
>gi|126465878|ref|YP_001040987.1| DNA topoisomerase VI subunit A [Staphylothermus marinus F1]
gi|126014701|gb|ABN70079.1| Spo11/DNA topoisomerase VI, subunit A [Staphylothermus marinus F1]
Length = 434
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DAVF +L + + + I+IT G PD +TRRF+R L E+L+LP + L D DPYG+ I
Sbjct: 206 DAVFQQLHRYGFWKKQKAILITSAGQPDRATRRFVRRLNEELKLPVYILADADPYGWYIY 265
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ ++ GS+ ++Y+++ L P ++G +D
Sbjct: 266 SVFKIGSITLSYESERLATPSAKFIGVTMTD 296
>gi|424819557|ref|ZP_18244639.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|290559010|gb|EFD92390.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422588|gb|EGD71982.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 367
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL D+ + C++I +G RR L+ L + LP + L D D +G I +
Sbjct: 199 TIWDRLNEDKAWKKLHCVIIASQGQATRGIRRLLQRLSREHNLPVYVLTDGDIWGIYIYS 258
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN---------CRLKL------- 109
+FGS+ +A+ + L +PE ++G D +KYGL ++ R+K
Sbjct: 259 AIKFGSIALAHVSDKLSLPEAKFMGLTMEDIDKYGLRRHLIKFKDVDIARIKQIKNYDWF 318
Query: 110 -----------TVE--GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
T+E G K E++AF A SF++E Y+P K++
Sbjct: 319 KNNKKWMEELNTMEKLGAKVELDAFTAKGLSFMTETYLPEKLK 361
>gi|357620490|gb|EHJ72655.1| meiotic recombination protein spo11 [Danaus plexippus]
Length = 423
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 39/174 (22%)
Query: 2 YIL----DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDC 56
YIL DA+F +L ++ R I++TG+GYPD+ TR+ L L+ +LRL LVD
Sbjct: 245 YILLVEKDAIFQKLLDEGALIRLGPVILLTGKGYPDVCTRQLLYRLVSELRLRALALVDA 304
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTV----- 111
DP+G++I TY++GS+ ++ + L + LGA D +P RL LT
Sbjct: 305 DPHGYEIYLTYKYGSLAQSHLSDSLACTSLLLLGARYQDLMTL-VPTAARLALTALDRRK 363
Query: 112 ---------------------------EGVKFEIEAFCACSFSFLSEKYIPSKI 138
G+K E+EA S + +S+ YIPSKI
Sbjct: 364 LAALINRPYLNTPTGDPIKEDLKRMLERGLKAELEAVVPYSVA-MSDSYIPSKI 416
>gi|209945744|gb|ACI97103.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPSDFEKYG 100
+ L P + W+G PS+ G
Sbjct: 245 QGLTTPALRWIGLHPSEIPALG 266
>gi|209945750|gb|ACI97106.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPSDFEKYG 100
+ L P + W+G PS+ G
Sbjct: 245 QELTTPALRWIGLHPSEIPALG 266
>gi|195431580|ref|XP_002063814.1| GK15872 [Drosophila willistoni]
gi|194159899|gb|EDW74800.1| GK15872 [Drosophila willistoni]
Length = 346
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I++TG+GYPD STRR + L + LP + LVD DP+G +I+ YR GS + + +
Sbjct: 201 RLILVTGKGYPDCSTRRLVHRLTMEFNLPAYILVDADPFGIEIMLVYRHGSQSLDFTSNL 260
Query: 81 LRIPEMHWLGAFPSDFEKYGLP-------------------KNCRLKLTVEGVKF---EI 118
L P + W+G PS+ + KN L + E K ++
Sbjct: 261 LATPSLRWVGLHPSEICSLAIGGTAPLSQEDNKKINDMLNRKNMDLGVRQELYKLQQMQL 320
Query: 119 EAFCACSFSFLSEKYIPSKIQ 139
+A FL YIP+K+
Sbjct: 321 KAEIESVLDFLCGDYIPNKVN 341
>gi|376372946|gb|ACZ58078.2| topoisomerase 6 subunit A [Oryza sativa Japonica Group]
Length = 487
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 2 YILDAVFHRLAN----DQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCD 57
YIL H + N Y T N CI++TG G P + TR FLR L ++ LP F L D D
Sbjct: 296 YILVVEKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLCDPD 355
Query: 58 PYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE 112
P G IL TY GS AYD + +P + W+G SD K L + +L+ E
Sbjct: 356 PEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSRE 410
>gi|209945746|gb|ACI97104.1| meiotic W68 [Drosophila simulans]
gi|209945752|gb|ACI97107.1| meiotic W68 [Drosophila simulans]
gi|209945754|gb|ACI97108.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTEENQLEAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPSDFEKYG 100
+ L P + W+G PS+ G
Sbjct: 245 QGLTTPALRWIGLHPSEIPALG 266
>gi|430814299|emb|CCJ28443.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 367
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIE---------KLRLPTFCLVDCDPYGFDILTTYRFGS 71
+ ++IT +G+PDISTR FL ++ + K P CLVD DPYG IL TY++GS
Sbjct: 212 KGVIITAKGFPDISTREFLYMISKSISSSQNPYKRSTPILCLVDHDPYGIGILATYKYGS 271
Query: 72 MQMAYDAKFLRIPEMHWLGAFPSDFEK 98
A+++ + IP + W+G +DF+K
Sbjct: 272 YATAHNSHLMAIPSIKWVGVHSNDFDK 298
>gi|115489640|ref|NP_001067307.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|108862984|gb|ABA99412.2| Type IIB DNA topoisomerase family protein, expressed [Oryza sativa
Japonica Group]
gi|113649814|dbj|BAF30326.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|125537460|gb|EAY83948.1| hypothetical protein OsI_39169 [Oryza sativa Indica Group]
gi|125580120|gb|EAZ21266.1| hypothetical protein OsJ_36918 [Oryza sativa Japonica Group]
gi|150371047|dbj|BAF65347.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|215715276|dbj|BAG95027.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 487
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 2 YILDAVFHRLAN----DQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCD 57
YIL H + N Y T N CI++TG G P + TR FLR L ++ LP F L D D
Sbjct: 296 YILVVEKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLCDPD 355
Query: 58 PYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE 112
P G IL TY GS AYD + +P + W+G SD K L + +L+ E
Sbjct: 356 PEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSRE 410
>gi|195653947|gb|ACG46441.1| meiotic recombination protein SPO11 [Zea mays]
gi|223973125|gb|ACN30750.1| unknown [Zea mays]
Length = 382
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DAVF RLA D+ + CI+IT +GYPDI+TR L L + +P F LVD +P G I
Sbjct: 218 DAVFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAI 277
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGA-------FPSDFEKYGLPKNCR---------- 106
L TY++GS+ M ++ + + WLG P D + P++ +
Sbjct: 278 LCTYKYGSISMGLES-YRYACNVKWLGVRGGDLHLIPEDAFQELKPRDLQIAKSLMSSKF 336
Query: 107 --------LKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L L VE G + +IEA + F FL KYI KI QG Y
Sbjct: 337 LQESHRAELALMVERGKRADIEALYSHGFDFLG-KYIARKIVQGDY 381
>gi|195487129|ref|XP_002091779.1| GE12053 [Drosophila yakuba]
gi|194177880|gb|EDW91491.1| GE12053 [Drosophila yakuba]
Length = 331
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 31/147 (21%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L + +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTMENQLSAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPSDFEKYG-----------------LPKN---------CRLKLTVE 112
+ L P + W+G PS+ G L +N R+ V+
Sbjct: 245 QGLTTPALRWIGLHPSEIPALGTVAVALVAGDNKKINDLLARNDLEPGVRQELRMLQDVQ 304
Query: 113 GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EIE+ FL++ YIP+KI
Sbjct: 305 -LKAEIESVV----DFLTDDYIPNKIN 326
>gi|146324038|ref|XP_747937.2| meiosis-specific topoisomerase Spo11 [Aspergillus fumigatus Af293]
gi|129556354|gb|EAL85899.2| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus Af293]
Length = 388
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 5 DAVFHRLANDQYCTRNRC-IVITGRGYPDISTRRFLRLLIEKLR-LPT------FCLVDC 56
+AV+ RL+ Y TR + G+GYPD+STR F+R L+++ R LP + LVD
Sbjct: 209 EAVYRRLSRSSYHTRAAAGKGVLGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALVDS 268
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF----EKYGLPKNCRLKL 109
DP G I++TY++GSM A+D + L + ++ WLG SD + +G RL L
Sbjct: 269 DPDGMAIMSTYKYGSMAHAHDNEKLNVSKLCWLGLRTSDVIGSADSFGDEAFIRLSL 325
>gi|195122807|ref|XP_002005902.1| GI20732 [Drosophila mojavensis]
gi|193910970|gb|EDW09837.1| GI20732 [Drosophila mojavensis]
Length = 325
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 33/146 (22%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I++TG+GYPD +TRR + L + LP + LVD DP+G +I+ Y+ GS M + AK
Sbjct: 181 RFILLTGKGYPDCTTRRIVYRLTVECNLPAYILVDADPFGIEIMLVYQLGSQAMNFSAKS 240
Query: 81 LRIPEMHWLGAFPSDFE--------------------------KYGLPKN-CRLKLTVEG 113
L P + W+G PS+ + G+ + CRL+
Sbjct: 241 LATPTLRWIGLHPSEIDSISNRSVPLTQHDNKKIVDILSRSNLSLGVRQELCRLQQV--Q 298
Query: 114 VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EIE+ FLS YIP+KI
Sbjct: 299 LKAEIESV----IDFLSPYYIPTKIN 320
>gi|123407440|ref|XP_001303010.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
gi|121884352|gb|EAX90080.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
Length = 384
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 29/159 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+++F RL + T I+IT RG PD +TR F+RLL + L +P L D D YG I+
Sbjct: 222 ESIFMRLVQSKIVTE--VILITPRGVPDYNTRYFVRLLDDSLSIPIVGLFDGDAYGIFIM 279
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD-------------------------FEKY 99
+++GSM A D + P M WLG PSD F+
Sbjct: 280 HLFKYGSMSAAQDGHAMACPHMMWLGIRPSDLNFLSSNEMLTITDKEEKILRNILTFDHL 339
Query: 100 GLPKNCRLKLTVEGV-KFEIEAFCACSFSFLSEKYIPSK 137
+KL +E K EIEA C S ++L + Y+P K
Sbjct: 340 SEEWKKEIKLILETKRKAEIEALCN-STNYLIDLYLPQK 377
>gi|84784010|gb|ABC61970.1| SPO11-like protein [Trichomonas vaginalis]
Length = 384
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 29/159 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+++F RL + T I+IT RG PD +TR F+RLL + L +P L D D YG I+
Sbjct: 222 ESIFMRLVQSKIVTE--VILITPRGVPDYNTRYFVRLLDDSLSIPIVGLFDGDAYGIFIM 279
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD-------------------------FEKY 99
+++GSM A D + P M WLG PSD F+
Sbjct: 280 HLFKYGSMSAAQDGHAMACPHMMWLGIRPSDLNFLSSNEMLTITDKEEKILRNILTFDHL 339
Query: 100 GLPKNCRLKLTVEGV-KFEIEAFCACSFSFLSEKYIPSK 137
+KL +E K EIEA C S ++L + Y+P K
Sbjct: 340 SEEWKKEIKLILETKRKAEIEALCN-STNYLIDLYLPQK 377
>gi|238908556|gb|ACF79646.2| unknown [Zea mays]
Length = 353
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DAVF RLA D+ + CI+IT +GYPDI+TR L L + +P F LVD +P G I
Sbjct: 189 DAVFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAI 248
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGA-------FPSDFEKYGLPKNCR---------- 106
L TY++GS+ M ++ + + WLG P D + P++ +
Sbjct: 249 LCTYKYGSISMGLES-YRYACNVKWLGVRGGDLHLIPEDAFQELKPRDLQIAKSLMSSKF 307
Query: 107 --------LKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L L VE G + +IEA + F FL KYI KI QG Y
Sbjct: 308 LQESHRAELALMVERGKRADIEALYSHGFDFLG-KYIARKIVQGDY 352
>gi|390939025|ref|YP_006402763.1| DNA topoisomerase [Desulfurococcus fermentans DSM 16532]
gi|390192132|gb|AFL67188.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus fermentans DSM
16532]
Length = 433
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 2 YIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCD 57
YIL DAVF +L + +++ I+IT G PD +TRRFLR L ++ LP + L D D
Sbjct: 197 YILVVEKDAVFQQLHRYGFWKKHKAILITSAGQPDRATRRFLRRLSDEYNLPVYILADSD 256
Query: 58 PYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
PYGF I + ++ GS+ ++Y+++ L P ++G +D
Sbjct: 257 PYGFYIYSVFKIGSITLSYESERLATPRAKFIGVMMTD 294
>gi|159126138|gb|EDP51254.1| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus A1163]
Length = 381
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 5 DAVFHRLANDQYCTRNRC-IVITGRGYPDISTRRFLRLLIEKLR-LPT------FCLVDC 56
+AV+ RL+ Y TR + G+GYPD+STR F+R L+++ R LP + LVD
Sbjct: 209 EAVYRRLSRSSYHTRAAAGKGVLGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALVDS 268
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF----EKYGLPKNCRLKL 109
DP G I++TY++GSM A+D + L + ++ WLG SD + +G RL L
Sbjct: 269 DPDGMAIMSTYKYGSMAHAHDNEKLNVSKLCWLGLRTSDVIGGADSFGDEAFIRLSL 325
>gi|147921703|ref|YP_684477.1| DNA topoisomerase VI subunit A [Methanocella arvoryzae MRE50]
gi|110619873|emb|CAJ35151.1| type II DNA topoisomerase VI, subunit A [Methanocella arvoryzae
MRE50]
Length = 366
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
AV++ L +++ +N CI++TG+G P + RR L E+ +P + D DP+G+ I +
Sbjct: 198 AVWNLLNQEKFWKKNNCILLTGKGQPARAERRLLARFGEEYDIPVYVFTDMDPWGYYIYS 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------- 112
Y++GS+ +A+ ++ P +LG D + +P++ +KL E
Sbjct: 258 VYKYGSINLAFFSEKAACPRAKYLGLSVKDVMNFDMPRSSWIKLNDEDHKRIAEISEYPW 317
Query: 113 ----------------GVKFEIEAFCACSFSFLSEKYIPSKIQG 140
G K E +A + S F + Y+P+KI+
Sbjct: 318 FKKDYWQKELTDLKKFGYKIEQDALVSKSIEFTANNYLPTKIEN 361
>gi|218884529|ref|YP_002428911.1| DNA topoisomerase VI subunit A [Desulfurococcus kamchatkensis
1221n]
gi|218766145|gb|ACL11544.1| Type 2 DNA topoisomerase VI subunit A [Desulfurococcus
kamchatkensis 1221n]
Length = 433
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 2 YIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCD 57
YIL DAVF +L + +++ I+IT G PD +TRRFLR L ++ LP + L D D
Sbjct: 197 YILVVEKDAVFQQLHRYGFWKKHKAILITSAGQPDRATRRFLRRLSDEYNLPVYILADSD 256
Query: 58 PYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
PYGF I + ++ GS+ ++Y+++ L P ++G +D
Sbjct: 257 PYGFYIYSVFKIGSITLSYESERLATPRAKFIGVMMTD 294
>gi|449546513|gb|EMD37482.1| hypothetical protein CERSUDRAFT_49779 [Ceriporiopsis subvermispora
B]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
++ITG+GYPD++TR+ ++ L + L +P CLVD D YG DIL+ Y+ GS M ++
Sbjct: 162 LLITGKGYPDVATRQLVKTLSDNLPPSIPILCLVDGDAYGIDILSVYKRGSTSMLHERDK 221
Query: 81 LRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
L + WLG + S+ G+ ++ + +T
Sbjct: 222 LAAGRVRWLGLWTSELAGLGIDRDALIPMT 251
>gi|209945768|gb|ACI97115.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|209945758|gb|ACI97110.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|170092549|ref|XP_001877496.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
gi|164647355|gb|EDR11599.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
Length = 315
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 27 GRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
G+GYPD++TR ++ L + L +P LVD DPYG DIL+ Y++GS+ M +++ L
Sbjct: 185 GKGYPDVATRHLVKSLADALPRTIPIMALVDGDPYGLDILSVYKYGSLSMQHESGKLATK 244
Query: 85 EMHWLGAFPSDFEKYGLPKNCRL 107
+ WLG + S+ E G+ ++ L
Sbjct: 245 RIKWLGIWASELETLGIDRDNLL 267
>gi|209945800|gb|ACI97131.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|209945760|gb|ACI97111.1| meiotic W68 [Drosophila melanogaster]
gi|209945762|gb|ACI97112.1| meiotic W68 [Drosophila melanogaster]
gi|209945764|gb|ACI97113.1| meiotic W68 [Drosophila melanogaster]
gi|209945766|gb|ACI97114.1| meiotic W68 [Drosophila melanogaster]
gi|209945770|gb|ACI97116.1| meiotic W68 [Drosophila melanogaster]
gi|209945772|gb|ACI97117.1| meiotic W68 [Drosophila melanogaster]
gi|209945774|gb|ACI97118.1| meiotic W68 [Drosophila melanogaster]
gi|209945776|gb|ACI97119.1| meiotic W68 [Drosophila melanogaster]
gi|209945778|gb|ACI97120.1| meiotic W68 [Drosophila melanogaster]
gi|209945780|gb|ACI97121.1| meiotic W68 [Drosophila melanogaster]
gi|209945782|gb|ACI97122.1| meiotic W68 [Drosophila melanogaster]
gi|209945784|gb|ACI97123.1| meiotic W68 [Drosophila melanogaster]
gi|209945786|gb|ACI97124.1| meiotic W68 [Drosophila melanogaster]
gi|209945788|gb|ACI97125.1| meiotic W68 [Drosophila melanogaster]
gi|209945794|gb|ACI97128.1| meiotic W68 [Drosophila melanogaster]
gi|209945796|gb|ACI97129.1| meiotic W68 [Drosophila melanogaster]
gi|209945802|gb|ACI97132.1| meiotic W68 [Drosophila melanogaster]
gi|209945804|gb|ACI97133.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|209945792|gb|ACI97127.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|209945748|gb|ACI97105.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M + +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTEENQLEAYILVDADPFGVEIMLVYRHGSQSMCFSS 244
Query: 79 KFLRIPEMHWLGAFPSDFEKYG 100
+ L P + W+G PS+ G
Sbjct: 245 QGLTTPALRWIGLHPSEIPALG 266
>gi|336371828|gb|EGO00168.1| hypothetical protein SERLA73DRAFT_107163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 296
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
DAVF L Q+ + I+ITG+GYPD++TR+ ++ + L +P LVD D
Sbjct: 107 DAVFQTLCRLQFASHPSLPGPGIIITGKGYPDVATRQLVKTFSDNLPSHIPILALVDGDA 166
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
YG DIL+ Y++GS + ++ L + WLG + S+ G+ + + +T
Sbjct: 167 YGIDILSVYKYGSWSLRHENGKLAAERVEWLGIWTSELADLGIDIDSMIPIT 218
>gi|209945798|gb|ACI97130.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|209945790|gb|ACI97126.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|209945756|gb|ACI97109.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I+ITG+GYPD TRR + L E+ +L + LVD DP+G +I+ YR GS M++ ++
Sbjct: 187 RFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQG 246
Query: 81 LRIPEMHWLGAFPSDFEKYG 100
L P + W+G PS+ G
Sbjct: 247 LTTPALRWIGLHPSEIPALG 266
>gi|393245080|gb|EJD52591.1| DNA topoisomerase IV, alpha subunit, partial [Auricularia delicata
TFB-10046 SS5]
Length = 300
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 5 DAVFHRLANDQYCTR----NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYG 60
DAVF L T I+ITG+GYPD++TR + L +P LVD D +G
Sbjct: 113 DAVFQTLCRAGVTTYPTLPGHGILITGKGYPDVATRDLVAALSRFTTVPLLALVDADAHG 172
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI 118
DI + Y++GS + ++ L+ + W+G + +D + G+ KN L L+ +K I
Sbjct: 173 VDIFSCYKYGSRSLQHEQDRLQALRLEWIGVWSTDLNRLGIDKNELLPLSAHDLKKAI 230
>gi|282163829|ref|YP_003356214.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
gi|282156143|dbj|BAI61231.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
Length = 366
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
AV++ L ++Y +N C+++TG+G P + RR L E+ ++P + D DP+G+ I +
Sbjct: 198 AVWNLLNQEKYWKKNNCLLLTGKGQPARAERRLLARFGEEYKIPIYVFTDMDPWGYYIYS 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------- 112
Y+ GS+ +A+ ++ P ++G D ++ +P++ +KL E
Sbjct: 258 VYKSGSINLAFFSEKAACPRAKYIGLSVKDVREFDIPRSSWVKLNDEDFKRMEEIASYDW 317
Query: 113 ----------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
G K E +A + S F + Y+P+KI+
Sbjct: 318 FKKDKWQKELADLKKFGYKIEQDALVSKSIEFTANNYLPAKIE 360
>gi|353235119|emb|CCA67136.1| related to Spo11-Coprinopsis cinerea [Piriformospora indica DSM
11827]
Length = 397
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
+A+F L ++ N I++TG+GYPDI++R+ L L L +P F LVD DP
Sbjct: 217 EAIFQTLCQAEFTRINALRKPGIILTGKGYPDIASRQLLHKLSSGLPETVPIFALVDADP 276
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI 118
+G +IL+ Y FGS+ M + L + W+G ++ E+ G+ L L K ++
Sbjct: 277 HGIEILSVYAFGSISMRHQNDGLTAERVVWIGVMLTELERRGVAAGDMLGLNQRDRK-KL 335
Query: 119 EAFC-----------ACSFSFLSEKYIPSKIQGVYS 143
E+ F+ E+ ++I+ VYS
Sbjct: 336 ESLLRREDRVMPQLWKNELRFMLERGQKAEIEAVYS 371
>gi|222639941|gb|EEE68073.1| hypothetical protein OsJ_26101 [Oryza sativa Japonica Group]
Length = 420
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA+F RLA D+ + CI+IT +GYPD++TR L L + +P F LVD +P G I
Sbjct: 256 DAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAI 315
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE------------------------KY 99
L TY++GS+ M ++ + + WLG D + K+
Sbjct: 316 LCTYKYGSISMGLES-YRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKF 374
Query: 100 GLPKNCRLKLTV---EGVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L R +LT+ G + EIEA + F FL KY+ KI QG Y
Sbjct: 375 -LQDKHRAELTLMLETGKRAEIEALYSHGFDFLG-KYVARKIVQGDY 419
>gi|426192133|gb|EKV42071.1| hypothetical protein AGABI2DRAFT_212660 [Agaricus bisporus var.
bisporus H97]
Length = 389
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 5 DAVFHRLANDQYCTRN----RCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
+AVF L N + + R ++ITG+GYPDI+TR ++ L + L +P LVD DP
Sbjct: 162 EAVFQTLCNLEITNSHDFPGRGLLITGKGYPDIATRHLVKTLADCLPPSIPIMALVDGDP 221
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPE-MHWLGAFPSDFEKYGLPKN 104
YG DIL+ Y++GS + ++ + L + + W+G + S+F G+ K+
Sbjct: 222 YGLDILSVYKYGSRALKHENERLAAGDRVVWIGIWASEFSSLGIDKD 268
>gi|154285542|ref|XP_001543566.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407207|gb|EDN02748.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 420
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEK----------LRLPTF 51
+A FHRLA Y T + I+ITG+GYPDISTR FL LL + P F
Sbjct: 235 EATFHRLATVNYHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIF 294
Query: 52 CLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LVD DP G I++TY++GS A+D L + + WLG S+
Sbjct: 295 MLVDGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASEL 339
>gi|383320074|ref|YP_005380915.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
gi|379321444|gb|AFD00397.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
Length = 365
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
AV++ L ++Y +N C+++TG+G P + RR L E+ ++P + D DP+G+ I +
Sbjct: 197 AVWNLLNQEKYWKKNNCLLLTGKGQPARAERRLLARFGEEYKIPIYVFTDMDPWGYYIYS 256
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------- 112
Y+ GS+ +A+ ++ P +LG D + +P++ +KL E
Sbjct: 257 VYKSGSINLAFFSEKAACPRAKYLGLSVKDVMDFDIPRSSWVKLNEEDFKRMEEIAAYPW 316
Query: 113 ----------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
G K E +A + S F + Y+P+KI
Sbjct: 317 FKKERWQRELADLKKFGYKIEQDALVSKSIEFTANNYLPTKI 358
>gi|325093817|gb|EGC47127.1| meiotic recombination protein spo11 [Ajellomyces capsulatus H88]
Length = 376
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEK----------LRLPTF 51
+A FHRLA Y T + I+ITG+GYPDISTR FL LL + P F
Sbjct: 191 EATFHRLATVNYHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIF 250
Query: 52 CLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LVD DP G I++TY++GS A+D L + + WLG S+
Sbjct: 251 MLVDGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASEL 295
>gi|323456369|gb|EGB12236.1| hypothetical protein AURANDRAFT_61362 [Aureococcus anophagefferens]
Length = 1086
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D +F RL D++ R C+++TG G PDI+TR + L L +P + LVD + +G +L
Sbjct: 27 DGIFRRLVEDRFFERYPCVLVTGMGVPDIATRALVHKLRGSLDVPVYGLVDWNSWGVGVL 86
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
Y+ GS ++ +A + ++ W+G S ++ LP +CR LT
Sbjct: 87 LCYKVGSARLGLEAVRYTV-DVKWIGLRSSQVDRLELPASCRQPLT 131
>gi|242080619|ref|XP_002445078.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
gi|241941428|gb|EES14573.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
Length = 384
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA+F RLA D+ + CI+IT +GYPDI+TR L L + +P F LVD +P G I
Sbjct: 220 DAIFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAI 279
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE-------------------KYGLPK- 103
+ TY++GS+ M ++ + + WLG D + Y P+
Sbjct: 280 MCTYKYGSISMGLES-YRYACNVKWLGMRGDDLQLIPESAFQVLKPRDLQTCTNYLRPQF 338
Query: 104 -----NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L L VE G + +IEA + F +L KYI KI QG Y
Sbjct: 339 HQESHRAELTLMVEKGKRADIEALYSHGFDYLG-KYIARKIVQGDY 383
>gi|328860088|gb|EGG09195.1| hypothetical protein MELLADRAFT_104525 [Melampsora larici-populina
98AG31]
Length = 434
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 21 RCIVITGRGYPDISTRRFL-RLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYD 77
+ +ITG+GYPD++TR+ L RL E+ +P + LVDCDP+G DIL+ Y+FGS +M++
Sbjct: 269 KSALITGKGYPDLATRQLLHRLSTEEKSNHIPIYILVDCDPHGIDILSVYKFGSHKMSFQ 328
Query: 78 AKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
L + ++ W+G S++++ L + L LT
Sbjct: 329 TG-LSVEKIEWIGLKCSEWKELDLDSHSLLPLT 360
>gi|240277734|gb|EER41242.1| meiosis-specific topoisomerase Spo11 [Ajellomyces capsulatus H143]
Length = 380
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEK----------LRLPTF 51
+A FHRLA + T + I+ITG+GYPDISTR FL LL + P F
Sbjct: 195 EATFHRLATVNFHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIF 254
Query: 52 CLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LVD DP G I++TY++GS A+D L + + WLG S+
Sbjct: 255 MLVDGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASEL 299
>gi|218200496|gb|EEC82923.1| hypothetical protein OsI_27876 [Oryza sativa Indica Group]
Length = 503
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA+F RLA D+ + CI+IT +GYPD++TR L L + +P F LVD +P G I
Sbjct: 339 DAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAI 398
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE------------------------KY 99
L TY++GS+ M ++ + + WLG D + K+
Sbjct: 399 LCTYKYGSISMGLES-YRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKF 457
Query: 100 GLPKN-CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
K+ L L +E G + EIEA + F FL KY+ KI QG Y
Sbjct: 458 LQDKHRAELTLMLETGKRAEIEALYSHGFDFLG-KYVARKIVQGDY 502
>gi|317148419|ref|XP_001822758.2| meiotic recombination protein spo11 [Aspergillus oryzae RIB40]
Length = 395
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 5 DAVFHRLANDQYCTR---NRCIVITGRGYPDISTRRFLRLLIEKLR-----LPTFCLVDC 56
+A++ RL Y TR + I+ITG+GYPD+STR F+R L E R L + LVD
Sbjct: 212 EAIYRRLTRSNYHTRAAAGKGILITGKGYPDLSTRAFIRKLYENSRRSDKALRFYGLVDN 271
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
DP G I++ Y++GSM L IP + WLG SD G P N
Sbjct: 272 DPDGMAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVS-GAPSN 318
>gi|348676336|gb|EGZ16154.1| hypothetical protein PHYSODRAFT_506531 [Phytophthora sojae]
Length = 376
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLR 82
I+ITGRG+PD++TR F+ LL L++P L DC+P+G I+ TY+ GS +M ++
Sbjct: 225 ILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYA 284
Query: 83 IPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEIEAFCACSFSFLSEKY 133
+ ++ W+G PS GLP++ LT + + + SF +E Y
Sbjct: 285 V-DIKWVGVRPSQIAALGLPQSSFKALTRKDIAVA-NSLLQASFVQANEHY 333
>gi|115474861|ref|NP_001061027.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|37805855|dbj|BAC99506.1| putative SPO11 protein [Oryza sativa Japonica Group]
gi|113622996|dbj|BAF22941.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|150371043|dbj|BAF65345.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
Length = 385
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA+F RLA D+ + CI+IT +GYPD++TR L L + +P F LVD +P G I
Sbjct: 221 DAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAI 280
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE------------------------KY 99
L TY++GS+ M ++ + + WLG D + K+
Sbjct: 281 LCTYKYGSISMGLES-YRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKF 339
Query: 100 GLPKN-CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
K+ L L +E G + EIEA + F FL KY+ KI QG Y
Sbjct: 340 LQDKHRAELTLMLETGKRAEIEALYSHGFDFLG-KYVARKIVQGDY 384
>gi|53125146|emb|CAE53723.1| topoisomerase 6 subunit A [Oryza sativa Indica Group]
Length = 385
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA+F RLA D+ + CI+IT +GYPD++TR L L + +P F LVD +P G I
Sbjct: 221 DAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAI 280
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE------------------------KY 99
L TY++GS+ M ++ + + WLG D + K+
Sbjct: 281 LCTYKYGSISMGLES-YRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKF 339
Query: 100 GLPKN-CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
K+ L L +E G + EIEA + F FL KY+ KI QG Y
Sbjct: 340 LQDKHRAELTLMLETGKRAEIEALYSHGFDFLG-KYVARKIVQGDY 384
>gi|301122147|ref|XP_002908800.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099562|gb|EEY57614.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 349
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 22 CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
I+ITGRG+PD++TR F+ LL L +P L DC+P+G I+ TY+ GS +M D+ L
Sbjct: 197 SILITGRGFPDLATRAFVNLLSNALGIPVLGLCDCNPFGLSIMLTYKLGSARMPLDS--L 254
Query: 82 RIP-EMHWLGAFPSDFEKYGLPKNCRLKLT 110
R ++ W+G PS GLP + LT
Sbjct: 255 RYAVDIKWVGVRPSQVSHLGLPTSSFKALT 284
>gi|37805856|dbj|BAC99507.1| putative SPO11 protein [Oryza sativa Japonica Group]
Length = 363
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA+F RLA D+ + CI+IT +GYPD++TR L L + +P F LVD +P G I
Sbjct: 199 DAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAI 258
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE------------------------KY 99
L TY++GS+ M ++ + + WLG D + K+
Sbjct: 259 LCTYKYGSISMGLES-YRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKF 317
Query: 100 GLPKNCRLKLTV---EGVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L R +LT+ G + EIEA + F FL KY+ KI QG Y
Sbjct: 318 -LQDKHRAELTLMLETGKRAEIEALYSHGFDFLG-KYVARKIVQGDY 362
>gi|209945742|gb|ACI97102.1| meiotic W68 [Drosophila yakuba]
Length = 319
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDA 78
+ R I+ITG+GYPD TRR + L + +L + LVD DP+G +I+ YR GS M++ +
Sbjct: 185 KRRFILITGKGYPDCCTRRIVHRLTMENQLSAYILVDADPFGVEIMLVYRHGSQSMSFSS 244
Query: 79 KFLRIPEMHWLGAFPSDFEKYG 100
+ L P + W+G PS+ G
Sbjct: 245 QGLTTPALRWIGLHPSEIPALG 266
>gi|326468722|gb|EGD92731.1| hypothetical protein TESG_00300 [Trichophyton tonsurans CBS 112818]
Length = 303
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
Query: 5 DAVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLL----IEKLRL-----PTFC 52
+AVFHRL Y I++TG+GYPD+S+R FLRLL + ++ P F
Sbjct: 120 EAVFHRLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMISSPPPIFI 179
Query: 53 LVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LVD DP G I++TY++GSM + L +P + W+G S+
Sbjct: 180 LVDSDPDGMAIMSTYKYGSMAQVHRNADLNMPSIQWVGLQASEM 223
>gi|336384581|gb|EGO25729.1| hypothetical protein SERLADRAFT_437454 [Serpula lacrymans var.
lacrymans S7.9]
Length = 498
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
DAVF L Q+ + I+ITG+GYPD++TR+ ++ + L +P LVD D
Sbjct: 302 DAVFQTLCRLQFASHPSLPGPGIIITGKGYPDVATRQLVKTFSDNLPSHIPILALVDGDA 361
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKY 99
YG DIL+ Y++GS + ++ L + WLG + S+ +Y
Sbjct: 362 YGIDILSVYKYGSWSLRHENGKLAAERVEWLGIWTSELAEY 402
>gi|33304618|gb|AAQ02689.1| meiosis-specific topoisomerase Spo11 [Sordaria macrospora]
Length = 481
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLL-IEKLRLPTFCLVDCDPYG 60
+A F L+ +Y +R I++TG+GYPD++TR+FL L + RLP F LVD D +G
Sbjct: 260 EATFRTLSASRYHAVSRAGSGILVTGKGYPDLATRKFLATLHFVQPRLPMFALVDFDTHG 319
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
IL TY++GS ++ ++ + ++P + WLG SD
Sbjct: 320 ISILRTYQYGSQRLDHEER-TKVPRLRWLGIRSSD 353
>gi|425773684|gb|EKV12019.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum Pd1]
gi|425775995|gb|EKV14234.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum PHI26]
Length = 386
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 5 DAVFHRLANDQYCTR---NRCIVITGRGYPDISTRRFLRLLIEKLRLPT------FCLVD 55
+AVFHRLA Y TR I++TG+GYPD TR FLR + + + + L D
Sbjct: 206 EAVFHRLARISYHTRALAGEGIMVTGKGYPDFMTRTFLRAISDSASKQSRSQPRFYALTD 265
Query: 56 CDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
DP+G I++TY++GS + L IP + WLG +D
Sbjct: 266 GDPHGMAIMSTYKYGSAAHLHQNARLSIPRLQWLGLRVTDI 306
>gi|449452446|ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 384
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 29/160 (18%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+F RLA+D+ R I+IT +GYPD++TR FL + + LP F LVD +P G IL
Sbjct: 221 AIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAIL 280
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE-----------------------KYGL 101
T+++GS+ M +A + + WLG D + L
Sbjct: 281 CTFKYGSIGMGLEA-YRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKIL 339
Query: 102 PKNCRLKLTV---EGVKFEIEAFCACSFSFLSEKYIPSKI 138
+N R +LT+ G K E+EA F +L EKYI KI
Sbjct: 340 QENYRQELTLMVERGQKAELEALYHNGFDYL-EKYIVKKI 378
>gi|326481332|gb|EGE05342.1| meiotic recombination protein spo11 [Trichophyton equinum CBS
127.97]
Length = 387
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 5 DAVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLL----IEKLRL-----PTFC 52
+AVFHRL Y I++TG+GYPD+S+R FLRLL + ++ P F
Sbjct: 204 EAVFHRLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMISSPPPIFI 263
Query: 53 LVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
LVD DP G I++TY++GSM + L +P + W+G
Sbjct: 264 LVDSDPDGMAIMSTYKYGSMAQVHRNADLNMPSIQWVG 301
>gi|321264504|ref|XP_003196969.1| endodeoxyribonuclease [Cryptococcus gattii WM276]
gi|317463447|gb|ADV25182.1| Endodeoxyribonuclease, putative [Cryptococcus gattii WM276]
Length = 567
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 5 DAVFHRLAND---QYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYG 60
DA+F L QY ++ITG+G+PD++TR+ LRL+++ + + LVD DP+G
Sbjct: 373 DAIFQSLCGAGLLQYERIGHGVLITGKGFPDLATRQILRLIVDTFPCVKIYALVDADPHG 432
Query: 61 FDILTTYRFGSMQMAYDAKFLRIP---EMHWLGAFPSDFEKYGL 101
IL+TY +GS AY + + +P + WLG SD+ G+
Sbjct: 433 LKILSTYMYGSKANAYSSDYEDLPLRDRVQWLGLRASDWSDLGI 476
>gi|41615325|ref|NP_963823.1| DNA topoisomerase VI subunit A [Nanoarchaeum equitans Kin4-M]
gi|40069049|gb|AAR39384.1| NEQ542 [Nanoarchaeum equitans Kin4-M]
Length = 359
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA+F RL +++ +NR ++I +G P TRR +R L ++ LP + D DP+GF I
Sbjct: 191 DAMFERLIEERFPEKNRALLIATKGQPSRGTRRLIRKLRYEVGLPVYVFTDGDPWGFYIY 250
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC---------RLKLTVE--- 112
+ + GSM +A ++ L P+ ++G D KY L R+K +E
Sbjct: 251 SVIKRGSMNLAMFSEQLATPDAKFIGLTIDDVIKYDLKDVAIQLKPIDVKRVKELMEYPW 310
Query: 113 ----------------GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K E +A S F++ KY+P KI+
Sbjct: 311 FKNKEWQRQFNKMLKLNIKAEQDALAKHSLEFVANKYLPEKIE 353
>gi|408405571|ref|YP_006863554.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366167|gb|AFU59897.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 368
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
D V + + + + I++TG G PD +TR ++ L E+ + P D DP+G I
Sbjct: 200 DTVLNNIRKSGFIQKYNAILMTGSGEPDRATRMMVKALNEEWKKPVVVFADADPWGLGIA 259
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV---------- 114
Y+ GS ++YD+ L P+ LG SD +Y +P+ RL + + +
Sbjct: 260 LRYKIGSESLSYDSDRLVTPDAKVLGMMFSDIYEYNIPEVARLAASDDDLNRANDMKKKP 319
Query: 115 -------------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
K E++AF F +L+E Y+P K++
Sbjct: 320 WFQDKQWQKELDLFLKKKEKCELDAFFKHGFKYLAEVYLPRKLR 363
>gi|407925927|gb|EKG18901.1| Spo11/DNA topoisomerase VI subunit A [Macrophomina phaseolina MS6]
Length = 458
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 10/85 (11%)
Query: 19 RNRCIVITGRGYPDISTRRFLRLLIEKL-----RLPTFCLVDCDPYGFDILTTYRFGSMQ 73
R++ +++TG+GYPD+STR FLR L +P + LVD DP G I+ TY++GS
Sbjct: 292 RHQGVMVTGKGYPDLSTRAFLRQLCAASVTGHPHIPIYALVDFDPDGLSIMCTYKYGSSA 351
Query: 74 MAYDAKFLRIPEMHWLG-----AFP 93
+A++ R+P M WLG AFP
Sbjct: 352 LAHEGDAARLPSMQWLGVKSTQAFP 376
>gi|195028295|ref|XP_001987012.1| GH20206 [Drosophila grimshawi]
gi|193903012|gb|EDW01879.1| GH20206 [Drosophila grimshawi]
Length = 334
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 33/146 (22%)
Query: 21 RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
R I++TG+GYPD +TRR + L + LP + LVD DP+G +I+ Y++GS M+ +
Sbjct: 190 RFILVTGKGYPDCTTRRIVYRLSVECNLPAYILVDADPFGIEIMLVYQYGSQAMSLFSSG 249
Query: 81 LRIPEMHWLGAFPSDFE---KYGLPKN------------------------CRLKLTVEG 113
L P + W+G P++ + K +P + CRL+ T
Sbjct: 250 LATPMLRWIGLHPTEIDSISKRAVPLSNYDNKKLIDMLSRSNISVGVRQELCRLQQT--Q 307
Query: 114 VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EIE+ FLS YIP+KI
Sbjct: 308 LKAEIESV----IDFLSPYYIPTKIN 329
>gi|269986172|gb|EEZ92484.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 367
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL D+ + C++I +G RR L+ L + LP + L D D +G I +
Sbjct: 199 TIWDRLNEDKAWKKLHCVIIASQGQATRGIRRLLQRLSREHNLPVYVLTDGDIWGVYIYS 258
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN---------CRL--------- 107
+FGS+ +A+ + L +PE ++G D +KY L ++ R+
Sbjct: 259 AIKFGSIALAHVSDKLSLPEAKFMGLTMEDIDKYELRRHLIKFKDVDIARIKQIKNYEWF 318
Query: 108 -----------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
K+ G K E++AF A SF++E Y+P K++
Sbjct: 319 KNNKKWMEELSKMEKLGAKVELDAFTAKGLSFMTETYLPEKLK 361
>gi|150402606|ref|YP_001329900.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C7]
gi|150033636|gb|ABR65749.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C7]
Length = 365
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ +++ CI+I+ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 196 GMFARLNAEEFWSKHNCILISLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEG------- 113
T + GS + + A L +PE +G P D Y LP K+ +K +G
Sbjct: 256 RTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTHPLKDHDVKRLKDGLKNDDFV 315
Query: 114 -----------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V+ E ++ ++ E+Y+P+KI+
Sbjct: 316 RSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKIE 358
>gi|327354903|gb|EGE83760.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis ATCC
18188]
Length = 403
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLL----------IEKLRLPTF 51
+A FHRLA Y + I+IT +GYPDI TR FL LL + + P F
Sbjct: 213 EATFHRLATANYHKTSAAGPGILITAKGYPDICTRAFLHLLSRTPGSVSGALRSNQPPIF 272
Query: 52 CLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
LVD DP G I++TY++GS A+D L + +M WLG S+
Sbjct: 273 MLVDSDPDGIAIMSTYKYGSRAQAHDNPNLTVNKMQWLGLQSSEV 317
>gi|261202302|ref|XP_002628365.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239590462|gb|EEQ73043.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239612183|gb|EEQ89170.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
ER-3]
Length = 395
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLL----------IEKLRLPTF 51
+A FHRLA Y + I+IT +GYPDI TR FL LL + + P F
Sbjct: 205 EATFHRLATANYHKTSAAGPGILITAKGYPDICTRAFLHLLSRTPGSVSGALRSNQPPIF 264
Query: 52 CLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
LVD DP G I++TY++GS A+D L + +M WLG S+
Sbjct: 265 MLVDSDPDGIAIMSTYKYGSRAQAHDNPNLTVNKMQWLGLQSSE 308
>gi|393217646|gb|EJD03135.1| topoisomerase acting in meiosis [Fomitiporia mediterranea MF3/22]
Length = 339
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDP 58
DAVF L+ I+ITG+GYPD++TR+ ++ L + + LVD D
Sbjct: 144 DAVFQTLSRAGLTNHPSLPGPGILITGKGYPDLATRQLVKTLSDNMPEETRILALVDADA 203
Query: 59 YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTV 111
YG DI++ Y++GSM M ++ + L + W+G + G+ ++ L +TV
Sbjct: 204 YGLDIVSVYKYGSMSMQHENESLAAERVEWIGVSAGEALSLGVDRDAFLPITV 256
>gi|6716731|gb|AAF26720.1|AF214638_1 Spo11 [Coprinopsis cinerea]
Length = 369
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 20 NRCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYD 77
+ I++TG+GYPDI+TR ++ L + L + LVDCDPYG DIL+ YR+GS M ++
Sbjct: 201 GKGIMVTGKGYPDIATRHLVKSLGDALPKHVALAALVDCDPYGIDILSVYRYGSQSMRHE 260
Query: 78 AKFLRIPEMHWLGAFPSDFEKY 99
L + WLG S+ ++
Sbjct: 261 NDTLATRRIKWLGLRISEVMEW 282
>gi|340624748|ref|YP_004743201.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
gi|339905016|gb|AEK20458.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
Length = 365
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL + + ++ CI+I+ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 196 GMFARLNAEGFWKKHNCILISLKGVPARATRRFIKRLNEEYKLPILVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------------------- 102
T + GS + + A L +PE +G P D Y LP
Sbjct: 256 RTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTHPLKDHDIKRLKDGLKNDDFV 315
Query: 103 ------KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+N +++ V+ E ++ ++ E+Y+P+K++
Sbjct: 316 KSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKVE 358
>gi|390601971|gb|EIN11364.1| DNA topoisomerase IV alpha subunit, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 199
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 20 NRCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYD 77
+RC + G+GYPD++TR+ + L L +P LVD DP+G DIL TY+ GS+ M ++
Sbjct: 120 SRC-TLGGKGYPDVATRKLVNQLANDLPTNVPILALVDWDPHGIDILLTYKLGSISMLHE 178
Query: 78 AKFLRIPEMHWLGAFPSDFEK 98
L + WLG + SD K
Sbjct: 179 KDTLAASRVQWLGIYSSDVLK 199
>gi|359417697|ref|ZP_09209781.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358031946|gb|EHK00766.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 376
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ +RL + + + I+I G P RR + ++ +L LP + D DP+G+ I +
Sbjct: 200 AMVNRLVEEDFHEEHNAIIIGTGGQPARGARRLINMMHNELELPVYVFTDGDPWGYYIYS 259
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL----------PKNC---------- 105
+ GSM +A+ + L P+ +G D E+YGL P++
Sbjct: 260 VLKSGSMSLAFQSDRLATPDAKLIGMTMEDIEEYGLEHVTEDLKGKPEDSGGPTKDYKRI 319
Query: 106 ----------------RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+L+L ++ GV+ E +A A S F++ +Y+P KI+
Sbjct: 320 HDVMDYEWMQKKEWQKQLELMLDKGVRVEQQALAANSLEFVANEYLPEKIE 370
>gi|307105917|gb|EFN54164.1| hypothetical protein CHLNCDRAFT_135583 [Chlorella variabilis]
Length = 423
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DAVF RL ++ CI+ TG+G PD++TR FL L E LP LVD +P G +I
Sbjct: 257 DAVFQRLVQQRFFDAVPCILATGKGVPDLATRAFLSGLSEAFPDLPLVGLVDWNPAGANI 316
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEK 98
L YRFGS +M +++ + + WLGA S ++
Sbjct: 317 LCVYRFGSARMG-ESQHYALRTLGWLGARSSQLQQ 350
>gi|134045187|ref|YP_001096673.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C5]
gi|132662812|gb|ABO34458.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanococcus
maripaludis C5]
Length = 365
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+I+ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 196 GMFARLNAEEFWKKHNCILISLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEG------- 113
T + GS + + A L +PE +G P D Y LP K+ +K +G
Sbjct: 256 RTLKVGSGKAVHLADKLAVPESRLIGVTPQDIVDYELPTHPLKDHDVKRLKDGLKNDDFV 315
Query: 114 -----------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V+ E ++ ++ E+Y+P+KI+
Sbjct: 316 RSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKIE 358
>gi|297620010|ref|YP_003708115.1| DNA topoisomerase [Methanococcus voltae A3]
gi|297378987|gb|ADI37142.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus voltae A3]
Length = 365
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL+ + + ++ CI+++ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 196 GMFARLSAEGFWKKHNCILVSLKGVPSRATRRFVKRLAEEKKLPILVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEG------- 113
T + GS + + A L +PE +G P D Y LP K+ +K +G
Sbjct: 256 RTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTHPLKDHDIKRLKDGLKNDDFV 315
Query: 114 -----------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V+ E ++ ++ E+Y+P+KI+
Sbjct: 316 KSFSDWQQALTMMANSKVRAEQQSLAKYGLKYVVEEYLPAKIE 358
>gi|313234274|emb|CBY10341.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A++ RL + +C C+++TGRG PD +TR L L ++ +P + LVD DP G DI
Sbjct: 119 AIYQRLVEEGFCASRNCLLVTGRGMPDRATRALLARL-DQSGVPCYILVDGDPCGLDIFL 177
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE-KYGLPKNCRLKLT 110
TYR GS Q+ ++ + + + G P+ + ++ PK+ +L LT
Sbjct: 178 TYRLGSWQLVHEQDIV-VRGLILAGIRPNQIKTRFKFPKDAQLALT 222
>gi|212535386|ref|XP_002147849.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
gi|210070248|gb|EEA24338.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
Length = 397
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 32/155 (20%)
Query: 5 DAVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLL-----------IEKLRL-- 48
+A+F RL +++Y T + I+ITG+GYPDI TR F+ L+ ++ L +
Sbjct: 200 EAIFRRLVHNRYHLESTAGKGILITGKGYPDICTREFVHLISDISCKRDSSSLQNLHIVQ 259
Query: 49 -PT----FCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK 103
PT F LVD D G I++TY++GSM A+ + L P++ WLG D + K
Sbjct: 260 PPTPPRFFALVDGDCDGMAIMSTYKYGSMAHAHASASLNAPKLQWLGTRLIDV----IVK 315
Query: 104 NCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ G++ E E + S S+ K I S +
Sbjct: 316 H-------NGLEVEDEDWVMISLSYRDVKKIRSML 343
>gi|45359000|ref|NP_988557.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis S2]
gi|45047875|emb|CAF30993.1| DNA topoisomerase VI A [Methanococcus maripaludis S2]
Length = 419
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL + + ++ CI+I+ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 250 GMFARLNAEGFWKKHNCILISLKGVPARATRRFIKRLNEEYKLPILVFTDGDPYGYLNIY 309
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------------------- 102
T + GS + + A L +PE +G P D Y LP
Sbjct: 310 RTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTHPLKDHDIKRLKDGLKNDDFV 369
Query: 103 ------KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+N +++ V+ E ++ ++ E+Y+P+K++
Sbjct: 370 KSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKVE 412
>gi|397583607|gb|EJK52708.1| hypothetical protein THAOC_27988 [Thalassiosira oceanica]
Length = 679
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ V++RL+ ++ R CI++TG+G+PD++TR + L +L LP + DC+P+G +L
Sbjct: 501 EGVYNRLSEERIFDRFPCILVTGKGFPDLATRALVHALHHELELPVVGICDCNPFGVSVL 560
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE--KYGLPKNCRLKLT 110
Y + +M D + + W+G PSD + K LP +LT
Sbjct: 561 ALYCYAGERMGIDGRMRYSVPIEWIGLRPSDVDGLKSELPGTVFQRLT 608
>gi|449298114|gb|EMC94131.1| hypothetical protein BAUCODRAFT_74427 [Baudoinia compniacensis UAMH
10762]
Length = 395
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 5 DAVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLLIEK------LRLPTFCLVDC 56
+A F LA+ + R +++TG+GYPDI+TR LR L E P + LVD
Sbjct: 196 EASFRSLASSNFWDRLSTEGVLLTGKGYPDIATRALLRFLSEPSPQNGFASPPVYGLVDF 255
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
DP G IL TY+ GS +A++ L++P++ WLG
Sbjct: 256 DPDGLAILATYKHGSFALAHENSSLQVPQLKWLG 289
>gi|391331670|ref|XP_003740266.1| PREDICTED: meiotic recombination protein SPO11-like [Metaseiulus
occidentalis]
Length = 288
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 40/174 (22%)
Query: 5 DAVFHRLANDQYCT--RNRCI---VITGRGYPDISTRRFLRLLIEKLRLPT---FCLVDC 56
DA+F +L + T RN I ++TG+G PD++TR+ + +L L +P F L D
Sbjct: 111 DAIFQKLLDQDALTFFRNLNIDLLLVTGKGVPDLNTRQLIHIL-AHLAIPLAKFFVLTDA 169
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCR---------- 106
D YG +I Y FGS+ AY + +P++ W+G PS+ E + + R
Sbjct: 170 DAYGIEIAGIYSFGSLVQAYAENY-GVPQIRWIGLLPSEIESFNMRPESRIVSSTMHQKR 228
Query: 107 --------------------LKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQG 140
LKL K EI+A SFL Y+ K++G
Sbjct: 229 LQNLLVRPWMKLRRQWYQEVLKLLSLRCKAEIQALDQFGHSFLLRTYLSDKLRG 282
>gi|154151278|ref|YP_001404896.1| DNA topoisomerase VI subunit A [Methanoregula boonei 6A8]
gi|153999830|gb|ABS56253.1| Spo11/DNA topoisomerase VI, subunit A [Methanoregula boonei 6A8]
Length = 362
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + I++ +G P STRR L + + LP D DP+ + I
Sbjct: 198 GMYDRLIENGFDEEHNAILLHLKGQPARSTRRLLNRISQTWNLPILVFTDGDPWSYRIYA 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++ L P+ +LG PSD Y LP
Sbjct: 258 SVAYGAIKSAHMSELLATPKAQFLGLQPSDIRDYNLPSDKLSDKDVEALNAELTDPRFAT 317
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
K L+L + G+K E +AF A F+++KY+P+++
Sbjct: 318 DYWKKQINLQLEL-GLKSEQQAFAARGLDFVTKKYLPARL 356
>gi|168053052|ref|XP_001778952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669624|gb|EDQ56207.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 38/172 (22%)
Query: 2 YIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDC 56
YIL DA+F RL +++ + CI++T +G+PD+++R L L ++ + F LVD
Sbjct: 111 YILVIEKDAIFQRLVEERFFLKVPCIIMTAKGFPDLASRALLHRLHQEFPSMLIFALVDW 170
Query: 57 DPYGFDILTTYRFGSMQMAYDA-KFLRIPEMHWLG-------------AFPS-------- 94
+P G I+ TYRFGS++M +A ++ + ++ WLG AF S
Sbjct: 171 NPAGLAIICTYRFGSIRMGLEAPRY--VCDVKWLGLRNRDALTYVPATAFTSLTDRDMTQ 228
Query: 95 --------DFEKYGLPKNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ + K L++ G K EIEA A + FL+ K+I KI
Sbjct: 229 ARSLLASKMLQNHKQYKQEILEMLTFGQKAEIEALYAHGYEFLA-KFITKKI 279
>gi|440797878|gb|ELR18952.1| DNA topoisomerase 6 subunit A, putative [Acanthamoeba castellanii
str. Neff]
Length = 464
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 25/125 (20%)
Query: 5 DAVFHRLANDQYCTRNRCIVITG------------------------RGYPDISTRRFLR 40
DAVF RLA D+ CI+IT G+PD++TR L+
Sbjct: 272 DAVFQRLAEDRVFDTLPCILITASTATVPINLAQVDTSNQKAHCAETEGFPDMATRGLLK 331
Query: 41 LLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYG 100
L E+LRLP L D +P G + TYR+GS++ ++ L ++ WLG D E+
Sbjct: 332 RLHEELRLPVVGLFDWNPGGMGVYITYRYGSVKSGLES-HLHTVDIKWLGLCWDDLERMH 390
Query: 101 LPKNC 105
LP +C
Sbjct: 391 LPSSC 395
>gi|150399499|ref|YP_001323266.1| DNA topoisomerase VI subunit A [Methanococcus vannielii SB]
gi|150012202|gb|ABR54654.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus vannielii SB]
Length = 365
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL + + ++ CI+I+ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 196 GMFARLNAEGFWNKHNCILISLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEG------- 113
T + GS + + A L IP+ +G P D Y LP K+ +K +G
Sbjct: 256 RTLKVGSGKAVHLADKLAIPDARLIGVTPQDILDYDLPTHPLKDHDIKRLKDGLKNDDFV 315
Query: 114 -----------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V+ E ++ ++ E+Y+P+K++
Sbjct: 316 RSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPTKVE 358
>gi|406866418|gb|EKD19458.1| meiosis-specific topoisomerase Spo11 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 430
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 5 DAVFHRLANDQYCTRN---RCIVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYG 60
+A F LA+ QY + R I++T +GYPDI TR+FL LL + LVD DP G
Sbjct: 262 EATFRTLASAQYWQSSLAGRGILLTAKGYPDIQTRQFLHLLSTCHPSIAILALVDFDPDG 321
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
I+ TY+ GS +A++ + L +P + WLG D G+ +
Sbjct: 322 IGIMATYKHGSQSLAHE-QDLAVPSVRWLGVRSGDIGAVGVGEG 364
>gi|295666744|ref|XP_002793922.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226277575|gb|EEH33141.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 398
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLRLPT----------- 50
+A F RLA Y + I+ITG+GYPD+ TR FLRLL L LP+
Sbjct: 210 EATFRRLATANYHKTSAAGPGIMITGKGYPDLCTRAFLRLLSHTLPLPSALGPSPSSPPP 269
Query: 51 -FCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ VD DP G I++TY++GS A++ L + ++ W G S+
Sbjct: 270 IYMFVDSDPDGMAIMSTYKYGSKAQAHENNNLTVSDIQWFGLQSSE 315
>gi|159905619|ref|YP_001549281.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C6]
gi|159887112|gb|ABX02049.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C6]
Length = 365
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL + + +++ CI+++ +G P +TRRF++ L E+ +LP D DPYG+ +I
Sbjct: 196 GMFARLNAEGFWSKHNCILVSLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEG------- 113
T + GS + + A L +PE +G P D Y LP K+ +K +G
Sbjct: 256 RTLKVGSGKAVHLADKLAVPEARLIGVTPQDIIDYELPTHPLKDHDVKRLKDGLKNDDFV 315
Query: 114 -----------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
V+ E ++ ++ E+Y+P+K++
Sbjct: 316 KSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKVE 358
>gi|298713147|emb|CBJ26903.1| Sporulation-specific protein 11 homologue [Ectocarpus siliculosus]
Length = 330
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 5 DAVFHRLAND-----------QYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCL 53
D VF+R+ D Y R +++TG+G+P ++ R + L E L LP L
Sbjct: 113 DGVFNRMVEDGFYDRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGL 172
Query: 54 VDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE 112
VDC+P+G + Y+ GS + + +PEM W+G PS + LP L+ +
Sbjct: 173 VDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEVHQTLSQQ 231
>gi|389739919|gb|EIM81111.1| DNA topoisomerase IV alpha subunit [Stereum hirsutum FP-91666 SS1]
Length = 406
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
+++TG+GYPD++TR+ ++ L + L +P LVD D YG DI++ Y+FGS + ++++
Sbjct: 225 LIVTGKGYPDLATRQLVKTLSDNLPETVPILALVDGDAYGIDIVSVYKFGSQALKHESER 284
Query: 81 LRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
L + +G + S+ + G+ + L+++
Sbjct: 285 LAAERVQCIGLWSSELGELGIDNSSLLQIS 314
>gi|297836981|ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
gi|297332213|gb|EFH62631.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+FHRL D+ C+ IT +GYPDI+TR FL + LP LVD +P G IL
Sbjct: 220 AIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPNLPILALVDWNPAGLAIL 279
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE-----------------------KYGL 101
T++FGS+ M +A + + W+G D L
Sbjct: 280 CTFKFGSIGMGLEA-YRYACNVKWIGLRGDDLNLIPDESLVPLKPKDSQIAKSLLSSKIL 338
Query: 102 PKNCR--LKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
N R L L V+ G + EIEA +++L KYI +KI QG Y
Sbjct: 339 QDNYRDELSLMVQTGKRAEIEALYCHGYNYLG-KYIATKIVQGKY 382
>gi|219852783|ref|YP_002467215.1| DNA topoisomerase VI subunit A [Methanosphaerula palustris E1-9c]
gi|219547042|gb|ACL17492.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosphaerula palustris
E1-9c]
Length = 362
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + +++ +G P STRR L ++ EK +LP D DP+ + I
Sbjct: 198 GMYARLQENGFDEEYGAVLVHLKGQPARSTRRVLHMIHEKFKLPITVFTDGDPWSYRIYA 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCR-----LKLTVE-------- 112
+ +GS++ A+ ++ L P+ ++G PSD Y LP + L L E
Sbjct: 258 SVAYGSIKSAHMSELLATPQAQFIGVQPSDISDYDLPSDTLSERDVLALKSELSDPRFDT 317
Query: 113 -------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
G+K E +AF A +++++Y+P+++
Sbjct: 318 EYWRYQIGRQLEIGIKSEQQAFAARGLDYVTKEYLPARL 356
>gi|221504024|gb|EEE29701.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
VEG]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 71/167 (42%), Gaps = 42/167 (25%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPT---FCLVDCDPYGF 61
DA+F L Q CI+ITG+G+PD TR+ LR L L + F DP+G
Sbjct: 179 DAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRCLQMSLNIEVGRYF-----DPHGI 233
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTV---------- 111
I +Y+ GS A++ +R +HW+G D E+ LP + RL L
Sbjct: 234 SIFLSYQHGS--RAFEGPLVRCAVLHWIGLCFEDLEQ--LPVDVRLPLLSRDRALLKSLL 289
Query: 112 --------------------EGVKFEIEAFCACSFSFLSEKYIPSKI 138
KFEIEA F +L+ YIPSKI
Sbjct: 290 VHPKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARYYIPSKI 336
>gi|255598401|ref|XP_002537001.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223517856|gb|EEF25382.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 135
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+F RLA D+ + CI+IT +GYPDI+TR L L L LVD +P G IL
Sbjct: 15 AIFQRLAEDRVFNQISCILITAKGYPDIATRFLLHKLSRSFPELLILALVDWNPAGLAIL 74
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE 97
+T++FGS+ M +A + + WLG D +
Sbjct: 75 STFKFGSIGMGLEA-YRYACNVKWLGVRGDDLQ 106
>gi|303273422|ref|XP_003056072.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462156|gb|EEH59448.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 334
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA F RLA D++ R C++IT +G PD++TR FL L LR+P LVD DPYG I+
Sbjct: 256 DAAFMRLAEDRFYNRFPCVIITAKGQPDVATRLFLSKLKRDLRIPVLALVDADPYGLKII 315
Query: 65 TTY 67
+ Y
Sbjct: 316 SVY 318
>gi|367024897|ref|XP_003661733.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
gi|347009001|gb|AEO56488.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
Length = 443
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLR--LPTFCLVDCDPY 59
+A F LA +Y +R I++T +GYPD++TRRFL L+ +R L F LVD DP+
Sbjct: 226 EATFRTLAAAKYSRTSRAGQGILLTAKGYPDLATRRFL-FLLHSVRPELSLFALVDFDPH 284
Query: 60 GFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
G I+ TY+ GS ++ ++ +P + WLG D
Sbjct: 285 GIAIMRTYKHGSQRLEHEQNAA-VPCLQWLGLHSGD 319
>gi|307179771|gb|EFN67961.1| Meiotic recombination protein SPO11 [Camponotus floridanus]
Length = 176
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA+F +L ++ C+R +CI++TG+GYPD++TR + +L EK+ LP + +VD DP+G DI
Sbjct: 113 DAIFQKLL-EEDCSRILKCILVTGKGYPDLNTRMLVNILSEKMSLPVYIIVDADPFGVDI 171
Query: 64 LTTYR 68
+ YR
Sbjct: 172 MLLYR 176
>gi|221483092|gb|EEE21416.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
GT1]
Length = 342
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 73/167 (43%), Gaps = 42/167 (25%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPT---FCLVDCDPYGF 61
DA+F L Q CI+ITG+G+PD TR+ LR L L + F DP+G
Sbjct: 179 DAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRRLQMSLNIKVGRYF-----DPHGI 233
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL-------------- 107
I +Y+ GS A++ +R +HW+G D E+ LP + RL
Sbjct: 234 SIFLSYQHGS--RAFEGPLVRCAVLHWIGLCFEDLEQ--LPVDVRLPLLSRDRALLKSLL 289
Query: 108 ---------KLTVE-------GVKFEIEAFCACSFSFLSEKYIPSKI 138
+L + KFEIEA F +L+ YIPSKI
Sbjct: 290 VHPKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARYYIPSKI 336
>gi|226287116|gb|EEH42629.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 389
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLRLPT----------- 50
+A F RLA Y + I+ITG+GYPD+ TR FLRLL L LP+
Sbjct: 201 EATFRRLATVNYHKTSAAGPGIMITGKGYPDLCTRAFLRLLSHTLPLPSVLGTLPSSPPP 260
Query: 51 -FCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+ VD DP G I++TY++GS A++ L + ++ W G S+
Sbjct: 261 IYMFVDSDPDGMAIMSTYKYGSRAQAHENNNLTVSDIQWFGLRSSE 306
>gi|134078477|emb|CAL00340.1| unnamed protein product [Aspergillus niger]
Length = 388
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 25/110 (22%)
Query: 6 AVFHRLANDQYCTRN---RCIVIT-----------------GRGYPDISTRRFLRLLIEK 45
AV+ RLA+ Y R+ + +++T G+GYPD+STR F+R L +
Sbjct: 186 AVYRRLASSNYHIRSAAGKGVLVTVSADTPITFXETYQPFQGKGYPDLSTRAFVRKLFDH 245
Query: 46 LRLPT-----FCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
T + LVD DP G I+ TY++GS+ A++ + L +P +HWLG
Sbjct: 246 SHQLTKKPQFYALVDGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLG 295
>gi|242792903|ref|XP_002482051.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718639|gb|EED18059.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
Length = 409
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 6 AVFHRLANDQY---CTRNRCIVITGRGYPDISTRRFLRLL--------------IEKLRL 48
AVF RL +++Y + I+ITG+GYPDI TR F+ L+ I+ +
Sbjct: 211 AVFRRLVHNRYHLESAAGKGILITGKGYPDICTREFVHLISDITFRRHNATLQNIDIVPS 270
Query: 49 PT----FCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
PT F LVD D G I++TY++GSM A+ + L P++ WLG + E + +N
Sbjct: 271 PTPLRFFALVDGDCDGIAIMSTYKYGSMAHAHASAMLNAPKLQWLG---TRIEDVIIKQN 327
Query: 105 CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
G + E E + S S K I S +
Sbjct: 328 --------GAEVEDEDWVMISLSNRDVKKIRSML 353
>gi|374630622|ref|ZP_09703007.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
gi|373908735|gb|EHQ36839.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
Length = 362
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + +++ +G P STRR L+ L +L LP D DP+ + I
Sbjct: 198 GMYARLMENGFDEEHNAVLVHLKGQPARSTRRVLKRLNSELGLPVVIFTDGDPWSYRIFA 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
+ +GS++ A+ ++ L P ++G PSD Y LP
Sbjct: 258 SIAYGSIKAAHMSEILATPGAQFIGVQPSDISNYDLPADKLTEGDIAALKAELTDPRFDT 317
Query: 104 -------NCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
N +LKL G+K E +AF + F+++ Y+P ++
Sbjct: 318 EYWRKEINLQLKL---GLKSEQQAFASRGLDFVTKDYLPDRL 356
>gi|237840215|ref|XP_002369405.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
gi|211967069|gb|EEB02265.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
Length = 342
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 73/167 (43%), Gaps = 42/167 (25%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPT---FCLVDCDPYGF 61
DA+F L Q CI+ITG+G+PD TR+ LR L L + F DP+G
Sbjct: 179 DAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRRLQMSLNIEVGRYF-----DPHGI 233
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRL-------------- 107
I +Y+ GS A++ +R +HW+G D E+ LP + RL
Sbjct: 234 SIFLSYQHGS--RAFEGPLVRCAVLHWIGLCFEDLEQ--LPVDVRLPLLSRDRALLKSLL 289
Query: 108 ---------KLTVE-------GVKFEIEAFCACSFSFLSEKYIPSKI 138
+L + KFEIEA F +L+ YIPSKI
Sbjct: 290 VHRKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARYYIPSKI 336
>gi|449501862|ref|XP_004161479.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 346
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+F RLA+D+ R I+IT +GYPD++TR FL + + LP F LVD +P G IL
Sbjct: 221 AIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAIL 280
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE 97
T+++GS+ M +A + + WLG D +
Sbjct: 281 CTFKYGSIGMGLEA-YRYACNVKWLGVRGDDLQ 312
>gi|167042185|gb|ABZ06918.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
gi|167044315|gb|ABZ08994.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 365
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I++ G STR L+ L ++L LP L D D YG I
Sbjct: 202 GLFTRFVEEQVDKKFKAIIVDTGGQAPRSTRTLLKRLHDELSLPVVILTDGDVYGEHIAM 261
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNCRLKLT----VE 112
+ GS A+ + L +P+ W+G + +D EKY LP K C L E
Sbjct: 262 VIKSGSANAAH-LRGLTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCHDLLKDPRYQE 320
Query: 113 GV-------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
G+ K E+EAF + +++KY+P K++
Sbjct: 321 GIWKKELEVFLKIKRKAELEAFSKYGLTNITDKYLPHKLE 360
>gi|302681745|ref|XP_003030554.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
gi|300104245|gb|EFI95651.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
Length = 277
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDI 63
DAVF L + + I+ G+GYPD++TR ++ L + L+ +P LVD D YG DI
Sbjct: 129 DAVFQTLYLRSPRSSSPLILSQGKGYPDLATRHLVKTLSDCLQDVPILALVDADAYGLDI 188
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI 118
L+ Y++GS + ++ L M W+G S+ + G+ + L T + K +
Sbjct: 189 LSVYKYGSRSLRHEVGKLAAARMEWMGVKGSELNELGVHADHLLPFTKQDEKMAL 243
>gi|333986519|ref|YP_004519126.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
gi|333824663|gb|AEG17325.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
Length = 352
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHR+ ++ + C+++ +G +TRRFL+ E+L LP + D DP+GF I
Sbjct: 189 GMFHRMVQEEAYKKFNCLIVGLKGQAARATRRFLKRTNEELGLPVYICNDGDPWGFHIAM 248
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRL----------- 107
GS ++A+ L P +LG SD Y LP + RL
Sbjct: 249 VIISGSAKLAHVNHELATPNAKFLGVTASDIVNYDLPTDKLKDIDVLRLKELYKDPRYHE 308
Query: 108 ---KLTVE-----GVKFEIEAFCACSFSFLSEKYIPSKIQGVYS 143
KL ++ G K E ++F ++ EKY+P K+ + S
Sbjct: 309 DFWKLEIKKMLKIGKKAEQQSFSKYGLEYVVEKYLPEKLDAMES 352
>gi|124485244|ref|YP_001029860.1| DNA topoisomerase VI subunit A [Methanocorpusculum labreanum Z]
gi|124362785|gb|ABN06593.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocorpusculum labreanum
Z]
Length = 365
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + +++ +G P +TRR L+ + E+L +P D DP+ + I
Sbjct: 199 GMFSRLQENGFDEEYNAVLLHLKGQPARATRRMLKRMNEELGIPVVVFTDGDPWSYRIYA 258
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +GS++ A+ ++ L P ++G PSD ++Y LP
Sbjct: 259 SVAYGSIKSAHMSELLATPSAQFIGVKPSDIQRYNLPADKLTEQDVSALKAELTDPRFAT 318
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
K L+L + +K E +AF + F++++Y+PS + +
Sbjct: 319 DFWKKEINLQLEM-NLKSEQQAFASRGLDFVTKEYLPSMLSEI 360
>gi|315230262|ref|YP_004070698.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
gi|315183290|gb|ADT83475.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ + R ++I +G RR + L + LP D DPYG+ I +
Sbjct: 204 AMADRLIEEKFPKKERALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 263
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L PE ++G D +KYGL
Sbjct: 264 TIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGGPTGDYKR 323
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LKL ++ GV+ E +A S F+++KY+P KI
Sbjct: 324 IIEEMNYPWFQTKEWQRQLKLALQWGVRIEQQALANKSLEFVAKKYLPEKI 374
>gi|30696943|ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
gi|75335899|sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2;
Short=AtSPO11-2
gi|7270977|emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|91806019|gb|ABE65738.1| DNA topoisomerase VIA [Arabidopsis thaliana]
gi|332196057|gb|AEE34178.1| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
Length = 383
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 30/165 (18%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+FHRL D+ C+ IT +GYPDI+TR FL + LP LVD +P G IL
Sbjct: 220 AIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPDLPILVLVDWNPAGLAIL 279
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE---KYGL----PKNCR----------- 106
T++FGS+ M +A + + W+G D + L PK+ +
Sbjct: 280 CTFKFGSIGMGLEA-YRYACNVKWIGLRGDDLNLIPEESLVPLKPKDSQIAKSLLSSKIL 338
Query: 107 -------LKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI-QGVY 142
L L V+ G + EIEA +++L KYI +KI QG Y
Sbjct: 339 QENYIEELSLMVQTGKRAEIEALYCHGYNYLG-KYIATKIVQGKY 382
>gi|150401437|ref|YP_001325203.1| DNA topoisomerase VI subunit A [Methanococcus aeolicus Nankai-3]
gi|150014140|gb|ABR56591.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus aeolicus
Nankai-3]
Length = 363
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+I+ +G P +TR+F + L E+ LP D DPYG+ +I
Sbjct: 194 GMFARLNAEKFWKKHNCILISLKGVPARATRQFTKRLNEEHNLPVLVFTDGDPYGYLNIY 253
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK----- 115
T + GS + + A L IP +G P D Y LP K+ +K +G+K
Sbjct: 254 RTLKVGSGKSVHLADKLSIPSARLIGVTPQDINDYDLPTHPLKDHDIKRLKDGLKNDDFV 313
Query: 116 -------------------FEIEAFCACSFSFLSEKYIPSKIQ 139
E ++ ++ E+Y+P+KI+
Sbjct: 314 KSHPEWQKAINHMIESKERAEQQSLAKYGLKYVVEEYLPAKIE 356
>gi|242399083|ref|YP_002994507.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
gi|242265476|gb|ACS90158.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y + + +V+ +G RR + L + LP D DPYG+ I +
Sbjct: 204 AMADRLIEEKYPKKEKALVVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 263
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L PE ++G D +KYGL
Sbjct: 264 TIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGGPTGDYKR 323
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LKL +E GV+ E +A S F++++Y+P KI
Sbjct: 324 IIEEMNYPWFQNKEWQRQLKLALEWGVRIEQQALANKSLEFVAKEYLPEKI 374
>gi|336121527|ref|YP_004576302.1| type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
gi|334856048|gb|AEH06524.1| Type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
Length = 365
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+ + +G P +TRRF++ L E+ LP D DPYG+ +I
Sbjct: 196 GMFARLNAEKFWKKHNCILASLKGVPARATRRFIKRLNEEHELPVLVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK----- 115
T + GS + + A L +P +G P D Y LP K+ LK +G+K
Sbjct: 256 RTLKVGSGKAVHLADKLAVPAARLIGVTPQDIVDYDLPTHPLKDHDLKRLKDGLKNDDFV 315
Query: 116 -------------------FEIEAFCACSFSFLSEKYIPSKIQ 139
E ++ ++ E+Y+P+KI+
Sbjct: 316 KSFPEWQKALNQMIEMKERAEQQSLAKYGLKYVVEEYLPAKIE 358
>gi|209880219|ref|XP_002141549.1| DNA topoisomerase [Cryptosporidium muris RN66]
gi|209557155|gb|EEA07200.1| DNA topoisomerase, putative [Cryptosporidium muris RN66]
Length = 331
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 34/163 (20%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++F L + R CI+ITG+G+PDI+TR+ + L+ KL++ T L D DP G +I
Sbjct: 167 SIFQYLMERKISDRFSCILITGKGFPDIATRKLISYLVYKLKITTLYLGDYDPPGINIYL 226
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------- 112
TY GS Y++ + P ++++G D + LP ++ LT
Sbjct: 227 TYVRGSDN--YESLIVACPHIYFMGIHYED--TFDLPCTTQIPLTKNDKTVLSNLLSDPI 282
Query: 113 -----------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
G K E+EAF A S FL Y+P+K+
Sbjct: 283 VKACNKLHGQCKMMFKSGYKCELEAFQAISSDFLVNSYLPNKL 325
>gi|386876676|ref|ZP_10118766.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
gi|386805513|gb|EIJ65042.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
Length = 368
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 37/170 (21%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I+I G STR L+ L ++++LP L D D YG I
Sbjct: 205 GLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKRLHDEMKLPVIVLTDGDVYGEHIAM 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNC----------- 105
+ GS A+ + L +P+ W+G + +D EKY LP K C
Sbjct: 265 VIKSGSANAAH-LRELTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCYDLQKDPRYQD 323
Query: 106 -----------RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGVYSV 144
RLK K E+EAF + +++KY+P K++ S+
Sbjct: 324 GIWKKELDVFLRLKR-----KAELEAFSKYGLTNITDKYLPQKLELAKSL 368
>gi|303276490|ref|XP_003057539.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
gi|226461891|gb|EEH59184.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
Length = 409
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DA F +L ++ R C+++T +G+PD++TR FL+ + R+P LVD +P G I
Sbjct: 243 DAAFDKLCRERIHARVPCVLVTAKGFPDLATRAFLKKFASEFPRVPMLALVDWNPSGLLI 302
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEK 98
L TYR GS A +A + ++ WLG +D E+
Sbjct: 303 LRTYRAGSSGGALEASRYAL-DVKWLGVRRADLER 336
>gi|409095996|ref|ZP_11216020.1| DNA topoisomerase VI subunit A [Thermococcus zilligii AN1]
Length = 385
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y + ++I +G RR + L + LP D DPYG+ I +
Sbjct: 208 AMADRLIEEKYSKKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 267
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L PE ++G D ++YGL
Sbjct: 268 TIKLGSINLAYLSEKLATPEAKFVGMTMDDIKRYGLENVTEKLKGIPPSKKGGPTGDYKR 327
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LKL ++ GV+ E +A S F++++Y+P KI
Sbjct: 328 IIEEMNYPWFQNEEWQRQLKLALDWGVRIEQQALANKSLEFVAKEYLPEKI 378
>gi|256811385|ref|YP_003128754.1| DNA topoisomerase VI subunit A [Methanocaldococcus fervens AG86]
gi|256794585|gb|ACV25254.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus fervens
AG86]
Length = 369
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ LP D DPYG+ +I
Sbjct: 200 GMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLYEEHELPVLVFTDGDPYGYLNIY 259
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 260 RTLKVGSGKAIHLADKLSIPAARLIGVTPQDIVDYDLPTHPLKEQDIKRIKDGLK 314
>gi|156062826|ref|XP_001597335.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980]
gi|154696865|gb|EDN96603.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 300
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 26 TGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
T +GYPDI +R+FL L E +P + LVD DP G I++TY++GS+ +A++ + L +P
Sbjct: 126 TAKGYPDIQSRQFLHYLAENHPLIPIYALVDFDPDGIGIMSTYKYGSVALAHENEDLSVP 185
Query: 85 EMHWLGAFPSDFEKYGLPKNCRLKLT 110
+ WLG +D LKLT
Sbjct: 186 SIRWLGLKSTDMMHGVKEDEGLLKLT 211
>gi|355570752|ref|ZP_09042022.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
gi|354826034|gb|EHF10250.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
Length = 351
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + R I++ +G P STRR L L ++ LP + D DP+ + I
Sbjct: 184 GMYARLIENGFDEEYRAILVHLKGQPARSTRRMLHRLSDEFNLPVYVFTDGDPWSYRIYA 243
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC-------------------- 105
+ +G+++ A+ ++ L P+ ++G PSD Y LP +
Sbjct: 244 SVAYGAIKSAHMSELLATPKAQFIGVQPSDIRDYNLPADALTEKDIAALQSELTDPRFGS 303
Query: 106 -------RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGVYSVV 145
+L+L + +K E +AF A F++ +Y+P ++ + V+
Sbjct: 304 SYWKEQIQLQLAL-NLKSEQQAFAARGLDFVTREYLPRRLSEMGLVI 349
>gi|443920159|gb|ELU40140.1| topoisomerase acting in meiosis [Rhizoctonia solani AG-1 IA]
Length = 472
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 43/188 (22%)
Query: 20 NRCIVITGRGYPDISTRRFLRLLIEKL------RLPTFCLVDCDPYGFDILTTYRFGSMQ 73
R ++ITG+GYPD++TR+ + + +L +P CLVD DP+G DIL+ Y+FGS
Sbjct: 272 GRGVIITGKGYPDLATRQLVSVFSSELPEWSDYSIPILCLVDADPHGMDILSVYKFGSKT 331
Query: 74 MAYDA--------------------KFLRIPEMHWLGAFPSDFEKYG------------- 100
+ ++ L IP + L +D K
Sbjct: 332 LVHEDVAAERVQWIGVKRLTVLTWRNRLGIPSLEMLKTTSADIRKAENMLRSQTLPSEWV 391
Query: 101 -LPKNCRLKLTVEGVKFEIEAFCACSFSFLS-EKYIPSKIQGVYSVVIDAEKGTVNISGK 158
+P+ ++ G K EIE L+ KY+ KI + ++ +D+E G + +S
Sbjct: 392 YVPREELEQMLQTGTKAEIEVISGRGEGALALVKYVCGKI--LEALALDSEDGMIELSDP 449
Query: 159 VNPNTMLR 166
+ + +++
Sbjct: 450 EDTDIVIK 457
>gi|307354510|ref|YP_003895561.1| DNA topoisomerase [Methanoplanus petrolearius DSM 11571]
gi|307157743|gb|ADN37123.1| DNA topoisomerase (ATP-hydrolyzing) [Methanoplanus petrolearius DSM
11571]
Length = 357
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + +++ +G P STRR L+ L +L LP D DP+ + I
Sbjct: 193 GMYARLMENGFSEEYDAVLLHLKGQPARSTRRMLKRLNNELGLPVVVFTDGDPWSYRIFA 252
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
+ +GS++ A+ + L P ++G PSD Y LP
Sbjct: 253 SIAYGSIKAAHMSDILVTPGAQFVGVQPSDISMYNLPSDHLTEGDIAALKAELTDPRFDT 312
Query: 104 -------NCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
N ++KL G+K E +AF A F++++Y+P+++
Sbjct: 313 EYWRNQINLQIKL---GLKSEQQAFAARGLDFVTKEYLPARL 351
>gi|407463038|ref|YP_006774355.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046660|gb|AFS81413.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
Length = 370
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I+I G STR L+ L ++L LP L D D YG I
Sbjct: 207 GLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKRLHDELGLPVIILTDGDVYGEHIAM 266
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNC----------- 105
+ GS A+ + L +P+ W+G + +D EKY LP K C
Sbjct: 267 VIKSGSANAAH-LRELTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCYDLQKDPRYES 325
Query: 106 -----------RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
RLK K E+EAF + +++KY+P K++
Sbjct: 326 GIWKKELEVFLRLKR-----KAELEAFAKYGLTNITDKYLPQKLE 365
>gi|358371609|dbj|GAA88216.1| meiotic recombination protein Spo11 [Aspergillus kawachii IFO 4308]
Length = 401
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 26/111 (23%)
Query: 6 AVFHRLANDQYCTRN---RCIVITGR-----------------GYPDISTRRFLRLLIEK 45
AV+ RLA+ Y R+ + I++T R GYPD++TR F+R L +
Sbjct: 206 AVYRRLASSNYHIRSAAGKGILVTVRPCSLIKFQEKYQQFQAKGYPDLNTRAFVRKLFDH 265
Query: 46 LRLPT------FCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
R T + LVD DP G I+ TY++GS+ A++ + L +P +HWLG
Sbjct: 266 SRQLTHKRPQFYALVDGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLG 316
>gi|350293955|gb|EGZ75040.1| DNA topoisomerase IV, alpha subunit [Neurospora tetrasperma FGSC
2509]
Length = 439
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 6 AVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGF 61
A F L+ +Y T +R I++TG+GYPD++TR+FL + + RL F LVD DP+G
Sbjct: 214 ATFRTLSASRYYTVSRAGSGILVTGKGYPDLATRKFLATIHSVRPRLLMFALVDFDPHGI 273
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
+L TY++ S ++ ++ + ++ + WLG SD
Sbjct: 274 SVLRTYQYSSQRLDHEER-TKVFGLRWLGIRSSD 306
>gi|126179533|ref|YP_001047498.1| DNA topoisomerase VI subunit A [Methanoculleus marisnigri JR1]
gi|125862327|gb|ABN57516.1| Spo11/DNA topoisomerase VI, subunit A [Methanoculleus marisnigri
JR1]
Length = 362
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + +++ +G P STRR LR L + L LP D DP+ + I
Sbjct: 198 GMYARLMENGFDEEYGAVLVHLKGQPARSTRRVLRKLNDSLGLPVVVFTDGDPWSYRIYA 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI------- 118
+ +GS++ A+ ++ L P+ ++G PSD Y LP + + V +K E+
Sbjct: 258 SVAYGSIKSAHMSELLATPQAQFIGVQPSDISDYNLPADKLTEQDVSALKAELTDPRFAT 317
Query: 119 -------------------EAFCACSFSFLSEKYIPSKI 138
+AF + F++++Y+P+++
Sbjct: 318 DYWRSQINLQLEMKLKSEQQAFASRGLDFVTKEYLPTRL 356
>gi|296110083|ref|YP_003617032.1| DNA topoisomerase (ATP-hydrolyzing) [methanocaldococcus infernus
ME]
gi|295434897|gb|ADG14068.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus infernus
ME]
Length = 369
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ LP D DPYG+ +I
Sbjct: 200 GMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEYELPVLVFTDGDPYGYLNIY 259
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 260 RTLKVGSGKAIHLADKLSIPAARLIGITPQDIIDYDLPTHPLKEQDIKRIKDGLK 314
>gi|397779966|ref|YP_006544439.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
gi|396938468|emb|CCJ35723.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
Length = 419
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR LR L + L LP D DP+ + I
Sbjct: 255 GMYARLMENGFDEEYGAILVHLKGQPARSTRRVLRRLNDSLDLPVVVFTDGDPWSYRIYA 314
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN--------------------- 104
+ +GS++ A+ ++ L P+ ++G P+D Y LP +
Sbjct: 315 SVAYGSIKSAHMSELLATPQAQFIGVQPTDISDYNLPADHLTEQDINALKAELTDPRFAT 374
Query: 105 ----CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
++ L +E +K E +AF + F++++Y+P+++
Sbjct: 375 EYWRSQINLQLEMKLKSEQQAFASRGLDFVTKEYLPTRL 413
>gi|358056024|dbj|GAA98369.1| hypothetical protein E5Q_05055 [Mixia osmundae IAM 14324]
Length = 425
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRLPTFC-LVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
I+ITGRGY D++TR + + + RL T LVD DP+G DIL YR G+++ + A L
Sbjct: 266 IIITGRGYADLATRSLIARISREDRLLTIAALVDGDPHGIDILACYRHGTLRHSGKAADL 325
Query: 82 RIPEMHWLGAFPSDFEKYGLPK 103
P M WLG +D ++ L +
Sbjct: 326 VCPRMIWLGLRQNDLDECSLVR 347
>gi|340345432|ref|ZP_08668564.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520573|gb|EGP94296.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 368
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I+I G STR L+ L ++L LP L D D YG I
Sbjct: 205 GLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKRLHDELGLPVIILTDGDVYGEHIAM 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNCRLKLT----VE 112
+ GS A+ + L +P+ W+G + +D EK+ LP K C T E
Sbjct: 265 VIKSGSANAAH-LRELTVPDAKWVGVWATDIEKFKLPTIPMTESDIKRCYDLQTDPRYQE 323
Query: 113 GV-------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
G+ K E+EAF + +++KY+P K++
Sbjct: 324 GIWKKELDVFLKIKRKAELEAFSKYGLTNITDKYLPQKLE 363
>gi|288561120|ref|YP_003424606.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
gi|288543830|gb|ADC47714.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
Length = 362
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHRL ++ R C+++ +G +TRRF++ + E+L LP + D DP+GF I
Sbjct: 201 GMFHRLVQEKAHERYNCLIVGLKGQAARATRRFIKRVNEELGLPVYICNDGDPWGFHIAQ 260
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRL----------- 107
GS ++A+ L P+ ++G SD + Y LP + RL
Sbjct: 261 VIISGSAKLAHVNHDLATPDAKFIGVTASDIQNYDLPTDPLKDIDVLRLKELSKDPRYQT 320
Query: 108 --------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
K+ G K E ++F ++ + Y P K+
Sbjct: 321 DFWQTEIKKMLKLGKKAEQQSFSKYGLEYVVDTYFPEKL 359
>gi|255949132|ref|XP_002565333.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592350|emb|CAP98697.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 368
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 6 AVFHRLANDQYCTR---NRCIVIT----------GRGYPDISTRRFLRLLIEKL-----R 47
AVFHRLA Y TR I++T G+GYPD TR FLR + + R
Sbjct: 179 AVFHRLARISYHTRALAGEGIMVTVSCVSDLAYAGKGYPDFMTRTFLRAMSDSASKQSRR 238
Query: 48 LPTF-CLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
P F L D DP+G I++TY++GS + L IP + WLG SD
Sbjct: 239 PPRFYALTDGDPHGMAIMSTYKYGSAANLHQNARLSIPRLQWLGLRVSDI 288
>gi|289192630|ref|YP_003458571.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
gi|288939080|gb|ADC69835.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ LP D DPYG+ +I
Sbjct: 200 GMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEHDLPVLVFTDGDPYGYLNIY 259
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 260 RTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDGLK 314
>gi|299752227|ref|XP_001830783.2| Spo11 [Coprinopsis cinerea okayama7#130]
gi|298409736|gb|EAU91152.2| Spo11 [Coprinopsis cinerea okayama7#130]
Length = 353
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 27 GRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
G+GYPDI+TR ++ L + L + LVDCDPYG DIL+ YR+GS M ++ L
Sbjct: 192 GKGYPDIATRHLVKSLGDALPKHVALAALVDCDPYGIDILSVYRYGSQSMRHENDTLATR 251
Query: 85 EMHWLGAFPSDFEKY 99
+ WLG S+ ++
Sbjct: 252 RIKWLGLRISEVMEW 266
>gi|15668545|ref|NP_247343.1| DNA topoisomerase VI subunit A [Methanocaldococcus jannaschii DSM
2661]
gi|2495937|sp|Q57815.1|TOP6A_METJA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|1591076|gb|AAB98358.1| DNA topoisomerase VI, subunit A (top6A) [Methanocaldococcus
jannaschii DSM 2661]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ LP D DPYG+ +I
Sbjct: 200 GMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEHDLPVLVFTDGDPYGYLNIY 259
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 260 RTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDGLK 314
>gi|161528915|ref|YP_001582741.1| DNA topoisomerase VI subunit A [Nitrosopumilus maritimus SCM1]
gi|160340216|gb|ABX13303.1| DNA topoisomerase (ATP-hydrolyzing) [Nitrosopumilus maritimus SCM1]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I+I G STR L+ L +++ LP L D D YG I
Sbjct: 207 GLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKRLHDEMGLPVIILTDGDVYGEHIAM 266
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNC----------- 105
+ GS A+ + L +P+ W+G + +D EKY LP K C
Sbjct: 267 VIKSGSANAAH-LRELTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCYDLQKDPRYES 325
Query: 106 -----------RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
RLK K E+EAF + +++KY+P K++
Sbjct: 326 GIWKKELEVFLRLKR-----KAELEAFAKYGLTNITDKYLPQKLE 365
>gi|332157795|ref|YP_004423074.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
gi|331033258|gb|AEC51070.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
Length = 380
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y R C+++ +G RR + L + LP D DPYG+ I +
Sbjct: 203 AMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 262
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P+ ++G D ++YGL
Sbjct: 263 TIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLENVTEKLKGIPPDKKGGPTGDYKR 322
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 323 LIEEMNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 374
>gi|374636729|ref|ZP_09708283.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
gi|373558021|gb|EHP84388.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
Length = 365
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ +P D DPYG+ +I
Sbjct: 196 GMFARLNAEKFWDKHNCILVSLKGVPARATRRFVKRLNEEYEVPVLVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 256 RTLKVGSGKAVHLADKLAIPSARLIGVTPQDIVDYDLPTHPLKEQDIKRIKDGLK 310
>gi|407465398|ref|YP_006776280.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
gi|407048586|gb|AFS83338.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
Length = 373
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I+I G STR L+ L +++ LP L D D YG I
Sbjct: 210 GLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKRLHDEMGLPVIVLTDGDVYGEHIAM 269
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNC----------- 105
+ GS A+ + L +P+ W+G + +D EKY LP K C
Sbjct: 270 VIKSGSANAAH-LRELTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCYDLQKDPRYQD 328
Query: 106 -----------RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
RLK K E+EAF + +++KY+P K++
Sbjct: 329 GIWKKELDVFLRLKR-----KAELEAFSKYGLTNITDKYLPQKLE 368
>gi|261402948|ref|YP_003247172.1| DNA topoisomerase VI subunit A [Methanocaldococcus vulcanius M7]
gi|261369941|gb|ACX72690.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus vulcanius
M7]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ +P D DPYG+ +I
Sbjct: 200 GMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEYDIPVLVFTDGDPYGYLNIY 259
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 260 RTLKVGSGKAIHLADKLSIPSARLIGVTPQDIVDYDLPTHPLKEQDIKRIKDGLK 314
>gi|389624895|ref|XP_003710101.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
gi|351649630|gb|EHA57489.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
Length = 466
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYG 60
+A F LA+ Q+ +R +++TG+GYPD+STR + L E R+P + LVD DP G
Sbjct: 251 EATFRTLASSQFYRNSRAGPGVMVTGKGYPDLSTRNLVYCLREARPRIPIYSLVDYDPDG 310
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGL-PKNCRLKLTVEGVKFEIE 119
IL TY++ S + ++ + + + W+G SD +++ L P N L+ V EI
Sbjct: 311 IRILCTYKYSSSALEHERQSA-VSNIQWIGIRLSDIKEHHLRPCNSVLQDAGSPVNTEIH 369
Query: 120 A 120
+
Sbjct: 370 S 370
>gi|18977950|ref|NP_579307.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus DSM 3638]
gi|397652071|ref|YP_006492652.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
gi|22654150|sp|Q8U0K9.1|TOP6A_PYRFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|18893722|gb|AAL81702.1| type II DNA topoisomerase subunit a [Pyrococcus furiosus DSM 3638]
gi|393189662|gb|AFN04360.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
Length = 382
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y R R ++I +G RR + L + LP D DPYG+ I +
Sbjct: 205 AMADRLIEEKYPKRERALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P+ ++G D ++YGL
Sbjct: 265 TIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLEHVTEKLKGIPPDKKGGPTGDYKR 324
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 325 LIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 376
>gi|312089432|ref|XP_003146245.1| type IIB DNA topoisomerase [Loa loa]
gi|307758593|gb|EFO17827.1| type IIB DNA topoisomerase [Loa loa]
Length = 359
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA+F +L + + +++TGRGYPDI+TR L+ L LP F L+DCDP+G +I
Sbjct: 184 DAIFQKLIGEGFLELFPNALLVTGRGYPDIATRIMLKKLSN---LPLFGLLDCDPHGIEI 240
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLG 90
TY++G+ +D + W+G
Sbjct: 241 AMTYKYGNCSKKFDVGNRTLSHFEWIG 267
>gi|6573667|pdb|1D3Y|A Chain A, Structure Of The Dna Topoisomerase Vi A Subunit
gi|6573668|pdb|1D3Y|B Chain B, Structure Of The Dna Topoisomerase Vi A Subunit
Length = 301
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ LP D DPYG+ +I
Sbjct: 132 GMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEHDLPVLVFTDGDPYGYLNIY 191
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L IP +G P D Y LP K +K +G+K
Sbjct: 192 RTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDGLK 246
>gi|15679026|ref|NP_276143.1| DNA topoisomerase VI subunit A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122955|sp|O27089.1|TOP6A_METTH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2622109|gb|AAB85504.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 353
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHRL ++ + +++ +G +TRRF++ + E+L LP + D DP+GF I
Sbjct: 189 GMFHRLVQEKAYKKFDALIVGLKGQAARATRRFIKRVNEELNLPVYICNDGDPWGFHIAM 248
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRLK---------- 108
GS ++A+ L P+ +LG SD Y LP + RLK
Sbjct: 249 VIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPTDPLKDVDVVRLKELLQDPRYRG 308
Query: 109 ----------LTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
LT+ G K E ++F ++ + Y+P K++ V
Sbjct: 309 DFWKTEIKKMLTI-GKKAEQQSFSKYGLEYVVDTYLPEKLEAV 350
>gi|375084292|ref|ZP_09731298.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
gi|374741052|gb|EHR77484.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
Length = 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y + + +++ +G RR + L + LP D DPYG+ I +
Sbjct: 204 AMADRLIEEKYPKKEKALIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 263
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L PE ++G D +KYGL
Sbjct: 264 TIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGGPTGDYKR 323
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LKL ++ GV+ E +A S F++ +Y+P KI
Sbjct: 324 IIEEMNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVARRYLPEKI 374
>gi|341581302|ref|YP_004761794.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
gi|340808960|gb|AEK72117.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
Length = 386
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 40/172 (23%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ + ++I +G RR + L + LP D DPYG+ I +
Sbjct: 209 AMADRLIEEKFPKKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC-------------------- 105
T + GS+ +AY + L PE ++G D E+YGL KN
Sbjct: 269 TIKQGSINLAYLSDKLATPEAKFVGMTMDDIERYGL-KNVTEKLKGIPPNKKGGPTADYK 327
Query: 106 ------------------RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LK+ ++ GV+ E +A S F+++KY+P KI
Sbjct: 328 RILEEMEYPWFQNKEWQRQLKMAIKMGVRIEQQALANKSLEFVAKKYLPEKI 379
>gi|84490128|ref|YP_448360.1| DNA topoisomerase VI subunit A [Methanosphaera stadtmanae DSM 3091]
gi|84373447|gb|ABC57717.1| type II DNA topoisomerase VI, subunit A [Methanosphaera stadtmanae
DSM 3091]
Length = 357
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++HR+ ++ R +++ +G +TRRF+R ++L++P + D DP+GF I
Sbjct: 190 GMYHRMVQEKAYDRFNTLIVGLKGQAARATRRFIRRASDELQVPVYICNDGDPWGFHIAM 249
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRL----------- 107
GS ++A+ L P+ +LG SD E Y LP + RL
Sbjct: 250 VIISGSAKLAHVNHDLATPDAKFLGVTASDIENYDLPTDKLKDIDVARLKELAADPRYKA 309
Query: 108 --------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
K+ G K E ++F ++ + Y P+KI +
Sbjct: 310 DFWQTEIKKMIKLGRKAEQQSFSKYGLEYIVDNYFPNKISAI 351
>gi|395645300|ref|ZP_10433160.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
gi|395442040|gb|EJG06797.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
Length = 363
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + ++ +G P STRR L+ + E+ LP D DP+ + I
Sbjct: 199 GMYARLIENGFDEEYGAALVHLKGQPARSTRRLLKRIHEEFGLPVVVFTDGDPWSYRIYA 258
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN--------------------- 104
+ +GS++ A+ ++ L P+ ++G PSD Y LP +
Sbjct: 259 SVAYGSIKAAHMSELLATPQAQFIGVQPSDIRDYDLPADHLSEQDVAALKAELTDPRFAT 318
Query: 105 --CRLKLTVE---GVKFEIEAFCACSFSFLSEKYIPSKI 138
R ++ ++ G+K E +AF A F++ +Y+P+++
Sbjct: 319 DYWREQIALQLQMGLKSEQQAFAARGLDFVTREYLPARL 357
>gi|118575978|ref|YP_875721.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
gi|118194499|gb|ABK77417.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I++ G STR L+ L +L LP L D D YG I
Sbjct: 143 GLFTRFVEEQVDKKFKSIIVDTGGQAPRSTRTLLKRLNSELGLPVVILTDGDVYGEHIAM 202
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNCR-LKLT---VE 112
+ GS A+ + L +P+ W+G + +D EKY LP K C LK E
Sbjct: 203 VIKSGSAGAAH-LRELTVPDAKWVGVWATDIEKYKLPTIPMTESDIKRCHDLKRDPRYQE 261
Query: 113 GV-------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
G+ K E+EAF + +++KY+P K++
Sbjct: 262 GIWRKELEAFLRIKRKAELEAFSKYGLTNITDKYLPQKLE 301
>gi|336269691|ref|XP_003349606.1| SPO11 protein [Sordaria macrospora k-hell]
gi|380093319|emb|CCC08977.1| putative SPO11 protein [Sordaria macrospora k-hell]
Length = 384
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 27 GRGYPDISTRRFLRLL-IEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPE 85
G+GYPD++TR+FL L + RLP F LVD D +G IL TY++GS ++ ++ + ++P
Sbjct: 188 GKGYPDLATRKFLATLHFVQPRLPMFALVDFDTHGISILRTYQYGSQRLDHEER-TKVPR 246
Query: 86 MHWLGAFPSD 95
+ WLG SD
Sbjct: 247 LRWLGIRSSD 256
>gi|403168183|ref|XP_003327852.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167387|gb|EFP83433.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 454
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 27 GRGYPDISTRRFLRLLIE-----KLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
G GYP +STR+ L E K R+P LVDCDP+G DI Y+FGS M++ L
Sbjct: 289 GIGYPSLSTRQLASRLSEHQEVVKRRVPILILVDCDPHGLDIAKVYKFGSQSMSFHPG-L 347
Query: 82 RIPEMHWLGAFPSDFEKYGLPKNCRL 107
R + W+G SD+ ++ + +C L
Sbjct: 348 RAKQAEWIGISSSDWNEFNI--DCDL 371
>gi|88604153|ref|YP_504331.1| DNA topoisomerase VI subunit A [Methanospirillum hungatei JF-1]
gi|88189615|gb|ABD42612.1| DNA topoisomerase, type IIB [Methanospirillum hungatei JF-1]
Length = 340
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + + I++ +G P STRR L L + +LP D DP+ + I
Sbjct: 174 GMYARLIENGFDEKYQAILVHLKGQPARSTRRVLNRLASEFQLPVTVFTDGDPWSYRIFA 233
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI------- 118
+ +G+++ A+ ++ L P ++G PSD Y LP + + + +K E+
Sbjct: 234 SVAYGAIKSAHISEILVTPSARFIGVQPSDIRDYDLPSDLLTEQDIAALKAELTDPRFAG 293
Query: 119 -------------------EAFCACSFSFLSEKYIPSKI 138
+AF A F++++Y+P+++
Sbjct: 294 DYWKEQINLQLALNLKSEQQAFAARGLDFVTDEYLPARL 332
>gi|71483085|gb|AAZ32518.1| DNA topoisomerase VI subunit A [uncultured euryarchaeote Alv-FOS4]
Length = 362
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 28/160 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + + R +++ +G P STRR L+ + E+L LP D DP+ F I
Sbjct: 197 GMFDRLVENGFDEKARAVLVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPWSFRIFA 256
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN--------------------- 104
+ +G+++ A+ +++L P ++G SD Y LP +
Sbjct: 257 SIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTDKLNDRDIAALKAELKDPRFNT 316
Query: 105 ------CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
RL L ++ K E +A ++++ Y+P K+
Sbjct: 317 PFWNEEIRLMLDIKK-KAEQQALAKYGLDYVTDTYLPEKL 355
>gi|255514007|gb|EET90271.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
DA++ RL D + + I+I+ +G TRR +R L ++ LP + D D +G+ I
Sbjct: 202 DALWQRLNEDGFWKKENAILISPQGQAARGTRRLIRKLADQ-GLPVYVFNDGDAWGWYIY 260
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
T + GSM +AY + + PE ++G +D E Y KN ++ T +K
Sbjct: 261 WTIKTGSMNLAYIGRDIATPEARFIGVTMADIEHYDFLKNLTMRATEVDIK 311
>gi|212223912|ref|YP_002307148.1| DNA topoisomerase VI subunit A [Thermococcus onnurineus NA1]
gi|212008869|gb|ACJ16251.1| type II DNA topoisomerase VI, subunit A [Thermococcus onnurineus
NA1]
Length = 386
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 40/172 (23%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ + ++I +G RR + L + LP D DPYG+ I +
Sbjct: 209 AMADRLIEEKFPKKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC-------------------- 105
T + GS+ +AY ++ L PE ++G D E+YGL KN
Sbjct: 269 TIKQGSINLAYLSEKLATPEAKFVGMTMDDIERYGL-KNVTEKLKGIPPNKKGGPTGDYK 327
Query: 106 ------------------RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+L+L ++ GV+ E +A S F+++KY+P KI
Sbjct: 328 RIIEEMNYPWFQNKEWQRQLQLALKMGVRIEQQALANKSLEFVAKKYLPEKI 379
>gi|333910721|ref|YP_004484454.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
gi|333751310|gb|AEF96389.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
Length = 365
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF-DIL 64
+F RL +++ ++ CI+++ +G P +TRRF++ L E+ +P D DPYG+ +I
Sbjct: 196 GMFARLNAEKFWDKHNCILVSLKGVPARATRRFIKRLNEEHDIPVLVFTDGDPYGYLNIY 255
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVEGVK 115
T + GS + + A L +P +G P D Y LP K +K +G+K
Sbjct: 256 RTLKVGSGKAVHLADKLAVPSARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDGLK 310
>gi|302806102|ref|XP_002984801.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
gi|300147387|gb|EFJ14051.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
Length = 354
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DAVF RL+ D++ I+IT +GYPD+++R L L LP LVD +P G I
Sbjct: 188 DAVFQRLSEDRFFQTIPSILITAKGYPDLASRVMLHKLHRSFPLLPILALVDWNPCGLGI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
+ TY+FGS+ M +A + ++ WLG D
Sbjct: 248 ICTYKFGSVGMGLEAPHY-VCDVKWLGVSSEDL 279
>gi|402587435|gb|EJW81370.1| type IIB DNA topoisomerase [Wuchereria bancrofti]
Length = 350
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFD 62
DA F +L + + +++TGRGYPDI+TR +L+ KL LP F L+DCDP+G +
Sbjct: 179 DATFQKLIGEGFLKLFPNTLLVTGRGYPDIATR----ILLNKLSNLPLFGLLDCDPHGIE 234
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
I TY++G+ + K + W+G
Sbjct: 235 IAMTYKYGNCSKTFGVKNQTLSHFEWIG 262
>gi|291333565|gb|ADD93260.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C82]
Length = 366
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + C ++ +G P STRR L+ + E+ LP +D DP+ F I
Sbjct: 202 GMFDRLIENGFDEAYNCALVHLKGQPARSTRRILKRMSEEWDLPVVVFLDGDPWSFRIFA 261
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI 118
+ +G+++ A+ +++L P +LG D E Y LP + V+ +K E+
Sbjct: 262 SIAYGAIKTAHISEYLATPTATYLGITSDDIEAYDLPSDDLSSRDVDALKAEL 314
>gi|432328235|ref|YP_007246379.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
gi|432134944|gb|AGB04213.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
Length = 362
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + + R I++ +G P STRR L+ + E+L LP D DP+ F I
Sbjct: 197 GMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPWSFRIFA 256
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
+ +G+++ A+ +++L P ++G SD Y LP +
Sbjct: 257 SIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD 295
>gi|302808341|ref|XP_002985865.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
gi|300146372|gb|EFJ13042.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
Length = 354
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDI 63
DAVF RL+ D++ I+IT +GYPD+++R L L LP LVD +P G I
Sbjct: 188 DAVFQRLSEDRFFQTIPSILITAKGYPDLASRVMLHKLHRSFPLLPILALVDWNPCGLGI 247
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
+ TY+FGS+ M +A + ++ WLG D
Sbjct: 248 ICTYKFGSVGMGLEAPHY-VCDVKWLGVSSEDL 279
>gi|58270330|ref|XP_572321.1| endodeoxyribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117758|ref|XP_772513.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255127|gb|EAL17866.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228579|gb|AAW45014.1| endodeoxyribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 559
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYG 60
DA+F L R ++ITG+G+PD++TR+ LRL+ + + + LVD DP+G
Sbjct: 366 DAIFQSLCGAGILQDERIGHGVLITGKGFPDLATRQILRLIADTFPCVKMYALVDADPHG 425
Query: 61 FDILTTYRFGSMQMAYDAKFLRIP---EMHWLGAFPSDF 96
IL+TY +GS AY + +P + WLG S +
Sbjct: 426 LKILSTYMYGSKANAYSTDYGDLPLGDRVQWLGLRASHW 464
>gi|254166844|ref|ZP_04873698.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289596418|ref|YP_003483114.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
gi|197624454|gb|EDY37015.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289534205|gb|ADD08552.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
Length = 362
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + + R I++ +G P STRR L+ + E+L LP D DP+ F I
Sbjct: 197 GMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPWSFRIFA 256
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
+ +G+++ A+ +++L P ++G SD Y LP +
Sbjct: 257 SIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD 295
>gi|357481549|ref|XP_003611060.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
gi|355512395|gb|AES94018.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
Length = 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+F RLA D++ + I+IT +GYPDI+TR L + LP LVD +P G IL
Sbjct: 219 AIFQRLAEDRFFNQIPSILITAKGYPDIATRFLLHRISRAFPDLPILALVDWNPAGLAIL 278
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEIEAFCAC 124
T++FGS+ M ++ + + WLG D LP + L + ++
Sbjct: 279 CTFKFGSVGMGLES-YRYACNVKWLGLRGHDLPM--LPDQSFVPLKTKDLQI-------- 327
Query: 125 SFSFLSEKYIPSKIQGVYSVVIDAEKGTVNISGKVNPN--TMLRILDKNGRHAEFSCLEF 182
+ S +S + +P V+ S +N N + ++ ++GR AE L F
Sbjct: 328 AQSLMSSRILP-----------------VSHSEPLNENYKEEVTLMVESGRRAEIEALYF 370
Query: 183 HG 184
HG
Sbjct: 371 HG 372
>gi|56118718|ref|NP_001008200.1| SPO11 meiotic protein covalently bound to DSB homolog [Xenopus
(Silurana) tropicalis]
gi|51513369|gb|AAH80352.1| spo11 protein [Xenopus (Silurana) tropicalis]
Length = 373
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYG 60
DA F RL +D +C R+ CI+ITG+G PD++TR R L + +P F LVD DPYG
Sbjct: 226 DATFQRLLDDNFCARSGPCILITGKGVPDLNTRLLTRKLWDSFHIPIFTLVDADPYG 282
>gi|254167482|ref|ZP_04874334.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|197623745|gb|EDY36308.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
Length = 362
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + + R I++ +G P STRR L+ + E+L LP D DP+ F I
Sbjct: 197 GMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPWSFRIFA 256
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
+ +G+++ A+ +++L P ++G SD Y LP +
Sbjct: 257 SIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD 295
>gi|148508003|gb|ABQ75802.1| DNA topoisomerase VI subunit A [uncultured haloarchaeon]
Length = 366
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + I++ +G P +TRR ++ +L LP D DP+ + I + +
Sbjct: 206 RLVENGFDEEYNAIIVHLKGQPARATRRIIKRFNTELDLPVAVFTDGDPWSYRIYASVSY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D KY LP
Sbjct: 266 GSIKSAHLSEYLATPDAQYVGITPEDITKYNLPSDILSDSDINALESELEDPRFSTEYWE 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
K +L+L + G K E +A + ++++ Y+P K+
Sbjct: 326 KQIKLQLKI-GQKAEQQALASRGLDYVTDSYLPEKL 360
>gi|329766434|ref|ZP_08257978.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795494|ref|ZP_10378858.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137033|gb|EGG41325.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 368
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F R +Q + + I+I G STR L+ L +++ LP L D D YG I
Sbjct: 205 GLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKRLHDEMGLPVIVLTDGDVYGEHIAM 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------KNC-------RLKL 109
+ GS A+ + L +P+ W+G + +D EK+ LP K C R +
Sbjct: 265 VIKSGSANAAH-LRELTVPDAKWVGVWATDIEKFKLPTIPMTESDIKRCYDLQNDPRYQ- 322
Query: 110 TVEGV-------------KFEIEAFCACSFSFLSEKYIPSKIQ 139
EG+ K E+EAF + +++KY+P K++
Sbjct: 323 --EGIWKKELDVFLKIKRKAELEAFSKYGLTNITDKYLPQKLE 363
>gi|337283840|ref|YP_004623314.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
gi|334899774|gb|AEH24042.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
Length = 382
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y R R ++I +G RR + L + LP D DPYG+ I +
Sbjct: 205 AMADRLIEEKYPKRERALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P ++G D ++YGL
Sbjct: 265 TIKQGSINLAYLSEKLATPGAKFVGMTMDDIKEYGLENVTEKLKGIPPDKKGGPTGDYKR 324
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 325 LIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 376
>gi|291333323|gb|ADD93030.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S04-C246]
Length = 368
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + RC +I +G P STRR ++ + ++ + P DCDP+ F I
Sbjct: 203 GMFDRLVENGFDEEARCAIIHLKGQPARSTRRIMKRMSDEWKKPILVFADCDPWSFRIFA 262
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC-------------------- 105
+ +G+++ A+ +++L E +LG D Y LP +
Sbjct: 263 SIAYGAIKTAHISEYLATNEAIYLGITADDILAYDLPSDDLTKSDLGALESELSDPRFAT 322
Query: 106 -----RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
++ L E G K E ++ F+++ Y+P K+ +
Sbjct: 323 GWWKEQINLMQEIGKKAEQQSLAKYGLDFVTDTYLPEKLAAL 364
>gi|390962072|ref|YP_006425906.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
gi|390520380|gb|AFL96112.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
Length = 386
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 40/172 (23%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ + ++I +G RR + L + LP D DPYG+ I +
Sbjct: 209 AMADRLIEEKFPRKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC-------------------- 105
T + GS+ +AY + L PE ++G D E+YGL KN
Sbjct: 269 TIKQGSINLAYLSDKLATPEAKFVGMTMDDIERYGL-KNVTEKLKGIPPNKKGGPTGDYK 327
Query: 106 ------------------RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LK+ ++ GV+ E +A S F+++KY+P KI
Sbjct: 328 RILEEMEYPWFQNKEWQRQLKMALKMGVRIEQQALANKSLEFVAKKYLPEKI 379
>gi|424814408|ref|ZP_18239586.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
gi|339758024|gb|EGQ43281.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
Length = 376
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ +RL + + + I+I G P RR + ++ +L LP + D DP+G+ I +
Sbjct: 200 AMVNRLVEEDFHKEHNVILIGTGGQPARGARRLINIMHNRLDLPVYVFTDGDPWGYYIYS 259
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ GSM +A+ + L P+ +G D + Y L
Sbjct: 260 VLKSGSMSLAFQSDRLATPDAKLIGMTMEDIDAYDLHHVTEDLKGKPEDSGGPTKDFKRI 319
Query: 103 --------------KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+N K+ +GV+ E +A + S F++ +Y+P KI+
Sbjct: 320 RDVMDYEWMQKDEWQNQFQKMLDKGVRVEQQALASQSLQFVANEYLPKKIE 370
>gi|298675296|ref|YP_003727046.1| DNA topoisomerase [Methanohalobium evestigatum Z-7303]
gi|298288284|gb|ADI74250.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalobium evestigatum
Z-7303]
Length = 370
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + +++ +G P STRR ++ + E+L LP D DP+ + I
Sbjct: 206 GMYARLIENGFDEKYNAVLVHLKGQPARSTRRIIKRMNEELGLPVLVFTDGDPWSYRIYA 265
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI------- 118
+ +G+++ A+ ++F+ P +LG P+D +Y L + + VE ++ E+
Sbjct: 266 SIAYGAIKSAHLSEFMATPNAKFLGLQPTDIVEYELSTDKLTERDVEALRSELSDPRFET 325
Query: 119 -------------------EAFCACSFSFLSEKYIPSKIQGV 141
+AF F++E Y+P +++ +
Sbjct: 326 DYWKEQIELQLDIKKKAEQQAFAGKGLDFVTETYLPDRLKDL 367
>gi|389852867|ref|YP_006355101.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
gi|388250173|gb|AFK23026.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
Length = 382
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y + R +++ +G RR + L + LP D DPYG+ I +
Sbjct: 205 AMADRLIEEKYPKKERALIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P+ ++G D ++YGL
Sbjct: 265 TIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLENVTEKLKGIPPDKKGGPTGDYKR 324
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 325 IIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 376
>gi|302839577|ref|XP_002951345.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
gi|300263320|gb|EFJ47521.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
Length = 2553
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL---RLPTFCLVDCDPYGF 61
DAVF RLA D+ C+++T RG PD++TR F L RL LVD +P G
Sbjct: 139 DAVFQRLAEDRIWDHLPCVLLTARGMPDLATRAFAARLAASFPAPRLQPVGLVDYNPAGV 198
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFP---SDFEKYGL-PKNCRLKLTVEGVK 115
IL TY++GS ++ + + +P + WLG +D E + L P + R ++ V G++
Sbjct: 199 VILATYKYGSDRLGPEGRAHLLPGLRWLGLRSRQLADVEHHHLQPLSERDRVMVRGLR 256
>gi|449470686|ref|XP_004153047.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 79
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 34/39 (87%), Gaps = 4/39 (10%)
Query: 2 YIL----DAVFHRLANDQYCTRNRCIVITGRGYPDISTR 36
YIL ++VF RLAND++C+RNRCIVITGRGYPD+STR
Sbjct: 41 YILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVSTR 79
>gi|374723606|gb|EHR75686.1| DNA topoisomerase VI subunit A [uncultured marine group II
euryarchaeote]
Length = 365
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + RC ++ +G P STRR ++ + E+ LP +D DP+ F I
Sbjct: 201 GMFDRLIENGFDEDYRCGLLHLKGQPARSTRRIMKRMSEEWDLPVVVFLDGDPWSFRIFA 260
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE------------- 112
+ +G+++ A+ +++L P +LG D Y LP + K +E
Sbjct: 261 SIAYGAIKTAHISEYLATPSATYLGITADDIVAYDLPNDDLSKKDIEALNAELTDPRFAD 320
Query: 113 -------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
G K E ++ F++E Y+P K+
Sbjct: 321 GWWQEQINMMLELGKKAEQQSLAKYGLDFVTETYLPEKL 359
>gi|448609019|ref|ZP_21660298.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
gi|445747396|gb|ELZ98852.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
Length = 366
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDEYNVLVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPEAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMTDYWK 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A A F++E+Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALAARGLDFVTEEYLPTRL 360
>gi|67902544|ref|XP_681528.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|40739807|gb|EAA58997.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|259481048|tpe|CBF74226.1| TPA: spo11 homologue spoA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 328
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 5 DAVFHRLANDQYCTRN---RCIVITGRGYPDISTRRFLRLLIE----KLRL----PTFCL 53
+AVF RL + + + I+ITG+GYPD++TR F+R + + + L P + L
Sbjct: 145 EAVFRRLVRNNFHNHTIVGKGILITGKGYPDLATRSFVRRIFQSTFPRSTLTQAPPFYIL 204
Query: 54 VDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
D DP G I++TY++GSM + + L +P + WLG S+
Sbjct: 205 ADGDPDGIAIMSTYKYGSMAHTRENERLNLPCLQWLGLRISEI 247
>gi|392593676|gb|EIW83001.1| DNA topoisomerase IV, alpha subunit, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 298
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 20 NRCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDILTTYRFGSMQMAYD 77
+ I + G+GYPD++TR L+ + L +P LVD DP+G DIL+ Y+FGS M ++
Sbjct: 124 GQVIGLQGKGYPDVATRELLKTFGDNLPDSVPILALVDGDPHGLDILSVYKFGSASMKHE 183
Query: 78 AKFLRIPEMHWLGAFPSDFEKYGL 101
L + +G + S+ G+
Sbjct: 184 VDKLAANRIESVGIWGSELSDLGV 207
>gi|304315143|ref|YP_003850290.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
gi|302588602|gb|ADL58977.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
Length = 353
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHRL ++ + +++ +G +TRRF++ + E+L LP + D DP+GF I
Sbjct: 189 GMFHRLVQEKAYKKFDALIVGLKGQAARATRRFIKRVNEELDLPVYICNDGDPWGFHIAM 248
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRLKLTVE------ 112
GS ++A+ L P+ +LG SD Y LP + RLK +
Sbjct: 249 VIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPTDPLKDIDVVRLKELLNDPRYRD 308
Query: 113 -------------GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
G K E ++F ++ + Y+P K++ V
Sbjct: 309 EFWKTEIKKMLKIGKKAEQQSFSKYGLEYVVDTYLPEKLEAV 350
>gi|288930742|ref|YP_003434802.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
gi|288892990|gb|ADC64527.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
Length = 360
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + R I++ +G P STRR L+ L +L LP D DP+ + I + +
Sbjct: 199 RLVENGFDEKFRAIIVHLKGQPARSTRRLLKRLNAELNLPVVVFTDGDPWSYRIYASVAY 258
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
GS++ A+ +++L P ++G PSD KY LP + ++ +K
Sbjct: 259 GSIKAAHLSEYLATPSAKFVGIRPSDIVKYDLPSDKLTDKDIQALK 304
>gi|148674667|gb|EDL06614.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_d [Mus musculus]
Length = 182
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDI 63
DA F RL +D +C+R CI++TG+G PD++TR ++ L + +P F LVD DPYG
Sbjct: 78 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGNPS 137
Query: 64 LTTYRFGSMQMA---YDAKFLRIPEMH 87
T+ G++ M ++ FL + +H
Sbjct: 138 WTS---GTIVMTVPCHECAFLPLEHLH 161
>gi|440633702|gb|ELR03621.1| hypothetical protein GMDG_06271 [Geomyces destructans 20631-21]
Length = 429
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLRLP-TFCLVDCDPYG 60
+A F L+ + +R +++T +GYPDI+TR L LL P + L D DP+G
Sbjct: 248 EATFRTLSTTHHARTSRAGPGLLVTAKGYPDIATRALLHLLSSTRGCPPIYVLTDYDPHG 307
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
IL+TY GS +A+ L +P + WLG
Sbjct: 308 ISILSTYAHGSASLAHQNDGLAVPGLRWLG 337
>gi|297742243|emb|CBI34392.3| unnamed protein product [Vitis vinifera]
Length = 381
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+F RLA D+ + I+IT +GYPDI+TR L + LP LVD +P G IL
Sbjct: 218 AIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPILALVDWNPAGLAIL 277
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFE-----------------------KYGL 101
T++FGS+ M +A + + WLG D + L
Sbjct: 278 CTFKFGSIGMGLEA-YRYACNVKWLGLRGDDLQLIPEESLIPLKPRDLQIAKSLKSSEIL 336
Query: 102 PKNCRLKLTV---EGVKFEIEAFCACSFSFLSEKYIPSKI 138
+N R +L V G + EIEA ++FL KYI KI
Sbjct: 337 EENYRNELEVMVQSGRRAEIEALYFRGYNFLG-KYIAKKI 375
>gi|226529322|ref|NP_001145818.1| uncharacterized protein LOC100279325 [Zea mays]
gi|219884541|gb|ACL52645.1| unknown [Zea mays]
Length = 270
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL 46
+ VF RLAND++C RNRCIVITGRGYPDI TRR + L I+ L
Sbjct: 213 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRHVLLFIKFL 254
>gi|312136519|ref|YP_004003856.1| DNA topoisomerase [Methanothermus fervidus DSM 2088]
gi|311224238|gb|ADP77094.1| DNA topoisomerase (ATP-hydrolyzing) [Methanothermus fervidus DSM
2088]
Length = 353
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++HRL ++ + C+++ +G +TRRFL+ L E+L+LP + D DP+GF I
Sbjct: 190 GMYHRLVQEKAHKKFDCLIVGLKGQAARATRRFLKRLNEELKLPVYICNDGDPWGFHIAM 249
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
GS ++A+ L P +LG +D Y LP +
Sbjct: 250 VIISGSAKLAHVNHELATPNAKFLGVTATDIINYDLPTD 288
>gi|76802378|ref|YP_327386.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
gi|121695453|sp|Q3IPW7.1|TOP6A_NATPD RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|76558243|emb|CAI49831.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
Length = 368
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + I++ +G P +TRR + L + L LP D DP+ + I + +
Sbjct: 208 RLVENGFDEEHNVIIVHLKGQPARATRRITKRLHDDLDLPVVVFCDGDPWSYRIYASVAY 267
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 268 GSIKSAHLSEYLATPEAEYIGIQPADIVEYDLPTDPLSDSDINALESELDDPRFQDDYWR 327
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++E Y+P ++
Sbjct: 328 EQIELQLDI-GKKAEQQALASRGLDFVTETYLPERL 362
>gi|315425013|dbj|BAJ46687.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|315426694|dbj|BAJ48319.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|343485466|dbj|BAJ51120.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
Length = 365
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A++ R + ++ + IV+ G +TR+F+R L +L LP + D DP+G I +
Sbjct: 202 AIYQRFLEENVPSKYKAIVVHTAGQAPRATRKFIRRLNTELGLPVYIFTDADPWGMHIAS 261
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP 102
FGS A+ + L +P+ W G + SD KY LP
Sbjct: 262 VIVFGSALSAH-VRELNVPDAVWAGLWASDITKYKLP 297
>gi|346975573|gb|EGY19025.1| meiotic recombination protein rec12 [Verticillium dahliae VdLs.17]
Length = 425
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLR--LPTFCLVDCDPY 59
+A F LA QY ++ +++TG+GYPD+ TR FL I+ ++ +P CLVD DP
Sbjct: 235 EAAFRPLAVQQYWRKSSAGHGVIVTGKGYPDLVTRSFLHA-IQAMKPDMPIVCLVDFDPD 293
Query: 60 GFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
G I+ Y+ GS + ++ + +P + WLG +D
Sbjct: 294 GLRIMQCYKHGSQSLRHEIHVV-LPRLQWLGIRSADL 329
>gi|7635881|emb|CAB88597.1| related to MEIOTIC RECOMBINATION PROTEIN REC12 [Neurospora crassa]
Length = 474
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 14 DQYCTRNRCIVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGFDILTTYRFGSM 72
D +C+ N G+GYPD++TR+FL + + RL F LVD DP+G +L TY++GS
Sbjct: 242 DLFCSNNADNYTQGKGYPDLATRKFLAAIHSVRPRLLMFALVDFDPHGISVLRTYQYGSQ 301
Query: 73 QMAYDAKFLRIPEMHWLGAFPSD 95
++ ++ + ++ + WLG SD
Sbjct: 302 RLDHEER-TKVFGLRWLGIRSSD 323
>gi|14591345|ref|NP_143423.1| DNA topoisomerase VI subunit A [Pyrococcus horikoshii OT3]
gi|3257992|dbj|BAA30675.1| 301aa long hypothetical typeII DNA topoisomerase subunit A
[Pyrococcus horikoshii OT3]
Length = 301
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y R C+++ +G RR + L + LP D DPYG+ I +
Sbjct: 124 AMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 183
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P+ ++G D ++Y L
Sbjct: 184 TIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLENVTEKLKGIPPDKKGGPTGDYKR 243
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 244 LIEELNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 295
>gi|345005806|ref|YP_004808659.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
gi|344321432|gb|AEN06286.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
Length = 366
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 28/157 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + C+V+ +G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 206 RLIENGFDDEHNCLVVHLKGQPARATRRIIKRLHDELDLPVLVFCDGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPGADYVGIRPQDIVDYDLPTDPLADSDINALESELSDPRFQTEFWE 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ L+L + G K E +A + F+++ Y+P +++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDTYLPERLE 361
>gi|432330700|ref|YP_007248843.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
gi|432137409|gb|AGB02336.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
Length = 364
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + I++ +G P STRR L + LP D DP+ + I
Sbjct: 198 GMYDRLIENGFDEEHNAILVHLKGQPARSTRRMLNRMSMTWDLPILVFTDGDPWSYRIYG 257
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI------- 118
+ +G+++ A+ ++ L P+ +LG PSD Y LP + VE ++ E+
Sbjct: 258 SVAYGAIKSAHMSELLATPKAQFLGLRPSDIRDYNLPSDKLTDKDVEALRSELTDPRFAT 317
Query: 119 -------------------EAFCACSFSFLSEKYIPSKI 138
+AF A F+++ Y+P+++
Sbjct: 318 DYWKKEINLQLEMNLKSEQQAFAARGLDFVTKTYLPARL 356
>gi|291333526|gb|ADD93223.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C37]
Length = 207
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL + + RC ++ +G P STRR ++ + E+ LP +D DP+ F I
Sbjct: 43 GMFDRLIENGFDEDYRCGLLHLKGQPARSTRRIIKRMSEEWDLPVVVFLDGDPWSFRIFA 102
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV----------- 114
+ +G+++ A+ +++L P +LG D Y LP + K +E +
Sbjct: 103 SIAYGAIKTAHISEYLATPSATYLGITADDIVAYDLPSDDLSKKDIEALNAELSDPRFAD 162
Query: 115 ---------------KFEIEAFCACSFSFLSEKYIPSKI 138
K E ++ F++E Y+P K+
Sbjct: 163 SWWQDQINMMLELDKKAEQQSLAKYGLDFVTETYLPEKL 201
>gi|219120278|ref|XP_002180881.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407597|gb|EEC47533.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 432
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDI 63
+ V++RL D++ R CI++TG+G+PD+STR + +L L LP L DC+PYG +
Sbjct: 234 EGVYNRLVEDRFFDRFPCILVTGKGFPDLSTRALVHVLHHTLGLLPVRGLCDCNPYGVMV 293
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEK 98
L TY+ + + +P + W+G PS ++
Sbjct: 294 LHTYQHTARKGVDGGHRFGVP-ISWIGLRPSQVQQ 327
>gi|34395897|sp|Q8TQF8.2|TOP6A_METAC RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 373
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 209 GMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELEIPVAVFTDGDPWSYRIYA 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P +LG PSD +Y L
Sbjct: 269 SVAYGAIKSAHLSEFMATPAARFLGLQPSDIVEYELSTDKLTEQDISALRSELSDPRFES 328
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ +L+L + G K E +AF F++E Y+P++++
Sbjct: 329 EYWKEQIQLQLDI-GKKAEQQAFAGKGLDFVTEVYLPNRLK 368
>gi|20090444|ref|NP_616519.1| DNA topoisomerase VI subunit A [Methanosarcina acetivorans C2A]
gi|19915459|gb|AAM04999.1| DNA topoisomerase subunit A [Methanosarcina acetivorans C2A]
Length = 393
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 229 GMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELEIPVAVFTDGDPWSYRIYA 288
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P +LG PSD +Y L
Sbjct: 289 SVAYGAIKSAHLSEFMATPAARFLGLQPSDIVEYELSTDKLTEQDISALRSELSDPRFES 348
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ +L+L + G K E +AF F++E Y+P++++
Sbjct: 349 EYWKEQIQLQLDI-GKKAEQQAFAGKGLDFVTEVYLPNRLK 388
>gi|7994697|sp|O59209.2|TOP6A_PYRHO RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 382
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y R C+++ +G RR + L + LP D DPYG+ I +
Sbjct: 205 AMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P+ ++G D ++Y L
Sbjct: 265 TIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLENVTEKLKGIPPDKKGGPTGDYKR 324
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 325 LIEELNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 376
>gi|448298523|ref|ZP_21488551.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
gi|445591193|gb|ELY45399.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
Length = 363
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALIVHLKGQPARATRRIIKRLHDELELPVTVFADGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPEAQYIGIQPADIVEYELPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+++L +E G K E ++ A F+++ Y+P ++ +
Sbjct: 323 EQIELQLEIGKKSEQQSLAARGLDFVTDTYLPERLDAM 360
>gi|429852423|gb|ELA27559.1| meiosis-specific topoisomerase spo11 [Colletotrichum
gloeosporioides Nara gc5]
Length = 348
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 13 NDQYCTRNRCIVITGRGYPDISTRRFLRLL-IEKLRLPTFCLVDCDPYGFDILTTYRFGS 71
N + + I+ITG+G PD+ T++FL LL K LP + LVD DPYG +I+ Y GS
Sbjct: 167 NIDTSSAGQGILITGKGVPDLQTKQFLHLLHSAKPELPIYGLVDFDPYGVNIMRCYSHGS 226
Query: 72 MQMAYDAKFLRIPEMHWLGAFPSDF 96
A++ + +P M WLG D
Sbjct: 227 RGHAHEVG-VTVPSMQWLGIKSGDL 250
>gi|308810407|ref|XP_003082512.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
gi|116060981|emb|CAL56369.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
Length = 410
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLL---IEKLRLPTFCLVDCDPYGF 61
DAVF++L ++ C++IT +GYPD++TR+FL LL +E F LVD +P+G
Sbjct: 241 DAVFNKLCAERIYEYLPCVLITAKGYPDVATRKFLWLLETVLEGSGAKFFGLVDWNPHGA 300
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
IL TY GS + + DA +P + W+G D
Sbjct: 301 WILATYSSGSKRSSIDAAEFVVP-LTWIGLRSEDL 334
>gi|392577766|gb|EIW70895.1| hypothetical protein TREMEDRAFT_61408 [Tremella mesenterica DSM
1558]
Length = 562
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 23 IVITGRGYPDISTRRFLRLLIE---KLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAK 79
+++TG+GYPD++T + L L E K + LVD DP+G DIL+ Y +GS Y +
Sbjct: 393 MLVTGKGYPDLATIQLLHLASETFPKQVVKFHALVDADPHGLDILSVYTYGSEATRYSVE 452
Query: 80 FLRIP---EMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
+ + WLG SD+ G+ + L+LT + V+
Sbjct: 453 HADLALGERLQWLGVKASDWISAGVAYDDLLELTDKDVQ 491
>gi|389847082|ref|YP_006349321.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|448614969|ref|ZP_21663997.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|388244388|gb|AFK19334.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|445753056|gb|EMA04475.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
Length = 366
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLIENGFDEQYNVLIVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPEAKFIGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMTDYWK 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A A F++E+Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALAARGLDFVTEEYLPTRL 360
>gi|388580953|gb|EIM21264.1| DNA topoisomerase IV, alpha subunit [Wallemia sebi CBS 633.66]
Length = 290
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 5 DAVFHRLANDQYC---TRNRCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPY 59
+ VF L Q+ I++TG+GYPDI+TR L L + +P LVD DP+
Sbjct: 48 ETVFSALREIQFSRSSVHGHNIILTGKGYPDIATRDLLNHLANVIPENVPFIGLVDSDPH 107
Query: 60 GFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
G I TY+FGS M + + P + +G ++F+ +P N L +T
Sbjct: 108 GLRIFLTYKFGSENMQQEKLQMACPRLKLMGLRNAEFDLLCIPPNQALSIT 158
>gi|57640733|ref|YP_183211.1| DNA topoisomerase VI subunit A [Thermococcus kodakarensis KOD1]
gi|90110665|sp|Q5JH82.1|TOP6A_PYRKO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|57159057|dbj|BAD84987.1| type II DNA topoisomerase VI, subunit A [Thermococcus kodakarensis
KOD1]
Length = 385
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ R ++I +G RR + L + LP D DPYG+ I +
Sbjct: 208 AMADRLIEEKFPKRENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 267
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY + L PE ++G D +KYGL
Sbjct: 268 TIKQGSINLAYLSDKLATPESKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGGPTGDYKR 327
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+L+L ++ GV+ E +A S F++++Y+P KI
Sbjct: 328 ILEEMNYPWFQNKEWQRQLQLALKWGVRIEQQALANKSLEFVAKEYLPEKI 378
>gi|126644799|ref|XP_001388116.1| topoisomerase VIA [Cryptosporidium parvum Iowa II]
gi|126117344|gb|EAZ51444.1| putative topoisomerase VIA [Cryptosporidium parvum Iowa II]
Length = 235
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 34/163 (20%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++F L + R C+VITG+G+PDISTR+ + +I K + L D DP+G +I
Sbjct: 71 SIFQYLMEREIYNRIPCLVITGKGFPDISTRKLVSDIICKSGITALYLGDFDPHGINIYL 130
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCR----------LKLTVE--- 112
TY GS ++++ P +++LG D E +P + R LK +E
Sbjct: 131 TYVRGSSN--FESQLAACPSIYYLGIHFEDTEL--IPSDTRVILSEKDRSTLKSLIEDPA 186
Query: 113 -----------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
K E+EAF + S +L Y+PSKI
Sbjct: 187 IKVSTNIKYKCKLMYEHNYKCELEAFQSISSDYLVNTYLPSKI 229
>gi|255076643|ref|XP_002501996.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
gi|226517261|gb|ACO63254.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
Length = 430
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 6 AVFHRL-ANDQYCTRNRCIVITGRGYPDISTRRFL-RLLIEKLRLPTFCLVDCDPYGFDI 63
+VFHRL A ++ TR C+V+T +G+PD++TR FL RL + +P LVD +P G I
Sbjct: 242 SVFHRLFAEERVHTRLPCVVVTAKGFPDLATRAFLKRLQLTHPHVPFLGLVDWNPSGVLI 301
Query: 64 LTTYRFGSMQMAYDAKFLRIP-EMHWLGAFPSDF 96
L TYR G + + R E+ WLG +D
Sbjct: 302 LGTYRAGGRTSSAVLESSRYALELKWLGVRSADL 335
>gi|448323107|ref|ZP_21512571.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
gi|445600293|gb|ELY54306.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
Length = 363
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPEAQYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+++L +E G K E ++ A F++E Y+P ++
Sbjct: 323 EQIELQLEIGKKSEQQSLAARGLDFVTETYLPERL 357
>gi|258597487|ref|XP_001350573.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254945371|gb|AAN36253.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 5 DAVFHRLANDQYC-TRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFD 62
+ +F++L Y T I+IT +G+PDI+TR+ L + ++ R L FCL D D YG
Sbjct: 156 ETIFYKLLQSNYISTYGPTILITAKGFPDINTRQLLYEIQKRYRELKIFCLTDYDVYGLS 215
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAF-PSDFEKYGLPKNCRL-KLTVEGVKFEIEA 120
I TY + Y + I +HWL F P + K + KN L KLT++ ++ ++
Sbjct: 216 IACTYASKNESKLYYVYDMSIENLHWLILFTPEEGIKKNVIKNTDLTKLTLKDIRI-LDN 274
Query: 121 FCA 123
CA
Sbjct: 275 LCA 277
>gi|73670271|ref|YP_306286.1| DNA topoisomerase VI subunit A [Methanosarcina barkeri str. Fusaro]
gi|121731963|sp|Q468I6.1|TOP6A_METBF RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|72397433|gb|AAZ71706.1| type II DNA topoisomerase VI, subunit A [Methanosarcina barkeri
str. Fusaro]
Length = 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 205 GMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYA 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P +LG PSD +Y L
Sbjct: 265 SVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYELSTDKLTEQDINALRSELSDPRFES 324
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ +L+L + G K E +AF +F++E Y+P++++
Sbjct: 325 DYWKEQIQLQLDI-GKKAEQQAFAGKGLNFVTEVYLPNRLK 364
>gi|223478247|ref|YP_002582502.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
gi|214033473|gb|EEB74300.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
Length = 386
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ + + ++I +G RR + L + LP D DPYG+ I +
Sbjct: 209 AMADRLIEEKFPKKEKALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY + L PE ++G D ++YGL
Sbjct: 269 TIKQGSINLAYLSDKLATPEAKFVGMTMDDIKRYGLENVTEKLKGIPPNKKGGPTGDYKR 328
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LK+ ++ GV+ E +A S F++++Y+P KI
Sbjct: 329 ILEEMEYPWFQNREWQRQLKMALKWGVRIEQQALANKSLEFVAKEYLPEKI 379
>gi|452210942|ref|YP_007491056.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
gi|452100844|gb|AGF97784.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
Length = 369
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 205 GMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYA 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P +LG PSD +Y L
Sbjct: 265 SVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYELSTDKLTEQDVSALRSELSDPRFES 324
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ +L+L + G K E +AF F++E Y+P++++
Sbjct: 325 DYWKEQIQLQLDI-GKKAEQQAFAGKGLDFVTEVYLPNRLK 364
>gi|21228520|ref|NP_634442.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Go1]
gi|34395891|sp|Q8PUB7.1|TOP6A_METMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|152149434|pdb|2Q2E|A Chain A, Crystal Structure Of The Topoisomerase Vi Holoenzyme From
Methanosarcina Mazei
gi|20907006|gb|AAM32114.1| Type II DNA topoisomerase VI, subunit A [Methanosarcina mazei Go1]
Length = 369
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 205 GMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYA 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P +LG PSD +Y L
Sbjct: 265 SVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYELSTDKLTEQDVSALRSELSDPRFES 324
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ +L+L + G K E +AF F++E Y+P++++
Sbjct: 325 DYWKEQIQLQLDI-GKKAEQQAFAGKGLDFVTEVYLPNRLK 364
>gi|240103483|ref|YP_002959792.1| DNA topoisomerase VI subunit A [Thermococcus gammatolerans EJ3]
gi|239911037|gb|ACS33928.1| Type II DNA topoisomerase VI, subunit A (Top6A) [Thermococcus
gammatolerans EJ3]
Length = 386
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL +++ + ++I +G RR + L + LP D DPYG+ I +
Sbjct: 209 AMADRLIEEKFPKKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY + L PE ++G D ++YGL
Sbjct: 269 TIKQGSINLAYLSDKLATPEARFVGMTMDDIKRYGLENVTEKLKGIPPNKKGGPTGDYKR 328
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+LKL ++ GV+ E +A S F++++Y+P KI
Sbjct: 329 ILEEMEYPWFQNREWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKI 379
>gi|294495184|ref|YP_003541677.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
gi|292666183|gb|ADE36032.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
Length = 367
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + N I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 203 GMYARLIENGFDELNDAILVHLKGQPARSTRRMIKRMNEELGIPVVVFTDGDPWSYRIYA 262
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P ++G PSD +Y L
Sbjct: 263 SVAYGAIKSAHLSEFMATPAAKFVGVQPSDIVEYELSTDKLTDKDVDALRSELTDPRFET 322
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +AF F+++ Y+P ++
Sbjct: 323 DYWKEQINLQLDI-GKKAEQQAFAGKGLDFVTKTYLPDRL 361
>gi|300711732|ref|YP_003737546.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|448296159|ref|ZP_21486220.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|299125415|gb|ADJ15754.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|445582882|gb|ELY37222.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
Length = 363
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + I++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNVIIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPEAQFIGIQPTDIVEYDLPTDPLSDSDVNALENELEDPRFQTDYWT 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+++L +E G K E +A + F+++ Y+P ++
Sbjct: 323 EQIELQLEIGKKAEQQALASRGLDFVTDTYLPERL 357
>gi|356540428|ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO11-2-like [Glycine max]
Length = 382
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL--RLPTFCLVDCDPYGFDI 63
A+F RL D++ + I+IT +GYPDI+T RFL I K LP LVD +P G I
Sbjct: 219 AIFQRLTEDRFFHQIPSILITAKGYPDIAT-RFLLYRISKAFPDLPILALVDWNPAGLAI 277
Query: 64 LTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
L T++FGS+ M +A + + WLG D
Sbjct: 278 LCTFKFGSIGMGLEA-YRYACNVKWLGLRGHDL 309
>gi|148643016|ref|YP_001273529.1| DNA topoisomerase VI subunit A [Methanobrevibacter smithii ATCC
35061]
gi|222445253|ref|ZP_03607768.1| hypothetical protein METSMIALI_00881 [Methanobrevibacter smithii
DSM 2375]
gi|261350188|ref|ZP_05975605.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
gi|148552033|gb|ABQ87161.1| type II DNA topoisomerase VI, subunit A [Methanobrevibacter smithii
ATCC 35061]
gi|222434818|gb|EEE41983.1| type IIB DNA topoisomerase [Methanobrevibacter smithii DSM 2375]
gi|288860974|gb|EFC93272.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
Length = 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHR+ ++ R +++ +G +TRRF++ + E+L LP + D DP+GF I
Sbjct: 204 GMFHRMVQEKAYDRFNTLIVGLKGQAARATRRFIKRVNEELHLPVYICNDGDPWGFHIAQ 263
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRLKLTVE------ 112
GS ++A+ L P+ ++G SD Y LP + RLK +
Sbjct: 264 VIISGSAKLAHVNHDLATPDAKFMGVTASDIINYDLPTDNLKDVDVMRLKELAKDPRYKS 323
Query: 113 -------------GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
G K E ++F ++ + Y P K++ +
Sbjct: 324 DFWQTEIKKMLKIGKKAEQQSFSKYGLEYVVDTYFPEKLEAM 365
>gi|325960094|ref|YP_004291560.1| type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
gi|325331526|gb|ADZ10588.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
Length = 358
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHR+ + + +++ +G +TRRFL+ + E+L LP + D DP+GF I
Sbjct: 197 GMFHRMVQENAYKKFNTLIVGLKGQAARATRRFLKRVNEELGLPVYICNDGDPWGFHIAM 256
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRLK---------- 108
GS ++A+ L P +LG SD Y LP + RLK
Sbjct: 257 VIISGSAKLAHVNHELATPNAKFLGVTASDIVNYDLPTDPLKDIDVLRLKELYKDPRYRD 316
Query: 109 --LTVE-------GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
VE G K E ++F ++ + YIP K+ +
Sbjct: 317 EFWKVEIKKMLKIGKKAEQQSFSKYGLEYVVDTYIPEKLDAL 358
>gi|146174859|ref|XP_001019494.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila]
gi|146144754|gb|EAR99249.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila
SB210]
Length = 650
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 23/144 (15%)
Query: 5 DAVFHRL--ANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGF 61
+ VF ++ D+ +N CI+ITG+GY D ST++++++L P F L D DP+G
Sbjct: 342 ETVFQKIIAEKDEQLLKN-CIMITGKGYGDYSTKQYIKMLTANNPNSPLFYLGDFDPFGL 400
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLG--AF-------PSDFEKYGLPKN------CR 106
DIL Y FGS Y +P +H+LG +F SD +K+ + N C+
Sbjct: 401 DILFNYTFGSENSVYQQD--NLPNIHFLGLSSFDILDFNQQSDEKKFNVENNLSKQDICK 458
Query: 107 LKLTVEGVKFEIEAFCACSFSFLS 130
L + KFE ++L
Sbjct: 459 LDALI--AKFEFSKLNQLKNNYLQ 480
>gi|330936289|ref|XP_003305327.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
gi|311317731|gb|EFQ86610.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
Length = 418
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Query: 23 IVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF- 80
+++T +GYPD+++R FLR +++ +PT+ VD DP G IL+TY++GS ++A++A
Sbjct: 265 VILTAKGYPDVASRNFLRQMMDCAPHIPTYAFVDLDPDGIAILSTYKYGSYRLAHEAVTP 324
Query: 81 -----LRIPEMHWLG 90
+P + WLG
Sbjct: 325 TDTPATSLPNIRWLG 339
>gi|408381803|ref|ZP_11179351.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
gi|407815734|gb|EKF86304.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
Length = 351
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHR+ + + +++ +G +TRRFL+ + E+L LP + D DP+GF I
Sbjct: 189 GMFHRMVQENAYKKFDSLIVGLKGQAARATRRFLKRVNEELNLPVYICNDGDPWGFHIAM 248
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN-------CRL----------- 107
GS ++A+ L P+ +LG SD Y LP + RL
Sbjct: 249 VIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPTDPLKDIDVLRLKELSKDPRYKD 308
Query: 108 --------KLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
K+ G K E ++F ++ + Y+P K++ +
Sbjct: 309 EAWQMEIKKMLKIGKKAEQQSFSKYGLEYVVDTYLPEKLESM 350
>gi|328350689|emb|CCA37089.1| Type II DNA topoisomerase VI subunit A [Komagataella pastoris CBS
7435]
Length = 382
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 5 DAVFHRL-----ANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPY 59
DAVF RL A DQY I++TG+GYPD TR+FL L+++ L + D D Y
Sbjct: 203 DAVFKRLCESSWAQDQY------ILVTGKGYPDHLTRQFLDLMMKHTSLKVYGFFDSDIY 256
Query: 60 GFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEK 98
G I TY++G+ Q + L + W G D+ +
Sbjct: 257 GLLIANTYKYGTSQ-DLNKMLLEKNRLQWAGVEILDYTQ 294
>gi|14520811|ref|NP_126286.1| DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
gi|13124622|sp|Q9V134.1|TOP6A_PYRAB RecName: Full=Type II DNA topoisomerase VI subunit A
gi|5458027|emb|CAB49517.1| Top6A DNA topoisomerase VI, subunit A [Pyrococcus abyssi GE5]
gi|380741353|tpe|CCE69987.1| TPA: DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
Length = 382
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ RL ++Y + C+++ +G RR + L + LP D DPYG+ I +
Sbjct: 205 AMADRLIEEKYPKKENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYS 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPK---------------------- 103
T + GS+ +AY ++ L P+ ++G D ++Y L
Sbjct: 265 TIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLEHVTEKLKGIPPDKKGGPTGDYKR 324
Query: 104 ---------------NCRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+LKL ++ GV+ E +A S F++++Y+P KI+
Sbjct: 325 LIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 376
>gi|254566367|ref|XP_002490294.1| Meiosis-specific protein that initiates meiotic recombination
[Komagataella pastoris GS115]
gi|238030090|emb|CAY68013.1| Meiosis-specific protein that initiates meiotic recombination
[Komagataella pastoris GS115]
Length = 367
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 5 DAVFHRL-----ANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPY 59
DAVF RL A DQY I++TG+GYPD TR+FL L+++ L + D D Y
Sbjct: 182 DAVFKRLCESSWAQDQY------ILVTGKGYPDHLTRQFLDLMMKHTSLKVYGFFDSDIY 235
Query: 60 GFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEK 98
G I TY++G+ Q + L + W G D+ +
Sbjct: 236 GLLIANTYKYGTSQ-DLNKMLLEKNRLQWAGVEILDYTQ 273
>gi|448473864|ref|ZP_21601925.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
gi|445818443|gb|EMA68300.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+VI +G P +TRR + + ++L +P D DP+ + I + +
Sbjct: 201 RLVENGFDEDYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +K+L PE ++G P+D +Y LP
Sbjct: 261 GSIKSAHLSKYLATPEAQFVGIQPADIVEYDLPADPLSDSDVNALESELEDPRFQTDYWE 320
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L + G K E ++ + F+++ Y+P ++ +
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERLDAM 358
>gi|225426144|ref|XP_002272935.1| PREDICTED: endoglucanase-like [Vitis vinifera]
Length = 753
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDIL 64
A+F RLA D+ + I+IT +GYPDI+TR L + LP LVD +P G IL
Sbjct: 584 AIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPILALVDWNPAGLAIL 643
Query: 65 TTYRFGSMQMAYDA----KFLRIPEMHWLGA-----------------FPSDFEKYG--- 100
T++FGS+ M +A FL P+ A P D +
Sbjct: 644 CTFKFGSIGMGLEAYRYGAFLLSPDKILTFAVLELNIKMPIDISPNIQLPRDLQIAKSLK 703
Query: 101 ----LPKNCRLKLTV---EGVKFEIEAFCACSFSFLSEKYIPSKI 138
L +N R +L V G + EIEA ++FL KYI KI
Sbjct: 704 SSEILEENYRNELEVMVQSGRRAEIEALYFRGYNFLG-KYIAKKI 747
>gi|451854047|gb|EMD67340.1| hypothetical protein COCSADRAFT_136216 [Cochliobolus sativus
ND90Pr]
Length = 455
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 5 DAVFHRL-ANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGF 61
+A F L + Q+ T +V+T +GYPD+++R+FLR L ++P F LVD DP G
Sbjct: 247 EATFRSLIGSAQWSTLGLHGVVVTAKGYPDVASRQFLRQLGNNAPQIPMFVLVDLDPDGI 306
Query: 62 DILTTYRFGSMQMAY-DAKF-----LRIPEMHWLGA 91
IL+TY++GS ++ + D L +P + WLG
Sbjct: 307 AILSTYKYGSYRLMHEDVALMNTPALSLPNVRWLGV 342
>gi|448455341|ref|ZP_21594521.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
gi|445813943|gb|EMA63916.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+VI +G P +TRR + + ++L +P D DP+ + I + +
Sbjct: 201 RLVENGFDEEYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +K+L PE ++G P D +Y LP
Sbjct: 261 GSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPADPLSDSDVNALESELDDPRFQTDYWE 320
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L + G K E ++ + F+++ Y+P ++ +
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERLDAM 358
>gi|256073778|ref|XP_002573205.1| meiotic recombination protein spo11 [Schistosoma mansoni]
gi|353231619|emb|CCD78037.1| putative meiotic recombination protein spo11 [Schistosoma mansoni]
Length = 158
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 5 DAVFHRLANDQYCTRNR-CIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFD 62
D +F +L N+++ + + C+++T +GYPD+ TR+FL + K +P L D DP+G +
Sbjct: 60 DTIFRKLLNEKFYEKFKPCLLVTAKGYPDLITRKFLAQINCKHPNIPIIGLFDADPHGLN 119
Query: 63 ILTTYRFGS---MQMAYDAKFLRIPEMHWLGAFPSDF 96
+ TY++G+ M D + IP + G P++
Sbjct: 120 VFCTYKYGTTNPMMQNEDGNPISIPNLQLCGLLPTEI 156
>gi|448439380|ref|ZP_21588021.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
gi|445691431|gb|ELZ43622.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+VI +G P +TRR + + ++L +P D DP+ + I + +
Sbjct: 201 RLVENGFDEAYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPSDPLSDSDVNALESELEDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
L+L + G K E ++ + F+++ Y+P ++ +
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERLDAM 358
>gi|448399836|ref|ZP_21571069.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
gi|445668289|gb|ELZ20919.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDDEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEAQFIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++E Y+P ++
Sbjct: 323 EQIELQLDL-GKKSEQQALASHGLDFVTETYLPERL 357
>gi|189207094|ref|XP_001939881.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975974|gb|EDU42600.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 435
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
Query: 23 IVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF- 80
+++T +GYPD+++R FLR +++ +P + VD DP G IL+TY++GS ++A++A
Sbjct: 260 VILTAKGYPDVASRNFLRQMVDCAPHVPMYVFVDLDPEGIAILSTYKYGSYRLAHEAVTP 319
Query: 81 -----LRIPEMHWLGA 91
+ +P + WLG
Sbjct: 320 TDTPAISLPNIRWLGV 335
>gi|224006946|ref|XP_002292433.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
gi|220972075|gb|EED90408.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
Length = 272
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDIL 64
+ V+++L+ ++ CI++TG+G+PD++TR + L ++L +P + D +P+G +L
Sbjct: 112 EGVYNKLSEERIFDDFPCILVTGKGFPDLATRALVNTLHKELDIPVVGICDSNPFGISVL 171
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKY--GLPKNCRLKLT 110
Y +M D + M W+G PS E LPK+ LT
Sbjct: 172 ALYYCAGERMGVDGRMKYTVPMMWIGLRPSTVESLEDDLPKDVFQSLT 219
>gi|448309742|ref|ZP_21499597.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
gi|445589408|gb|ELY43641.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
Length = 363
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDDEYNALIVHLKGQPARATRRIIKRLHDELDLPVTVFADGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L P ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPAAQYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+++L +E G K E ++ A F++E Y+P ++
Sbjct: 323 EQIELQLEIGKKSEQQSLAARGLDFVTETYLPERL 357
>gi|448302924|ref|ZP_21492874.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
gi|445593931|gb|ELY48098.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
Length = 363
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDDEYNALIVHLKGQPARATRRIIKRLHDELDLPVTVFADGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L P ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPAAQYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+++L +E G K E ++ A F++E Y+P ++
Sbjct: 323 EQIELQLEIGKKSEQQSLAARGLDFVTETYLPERL 357
>gi|170586006|ref|XP_001897772.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
gi|158594796|gb|EDP33375.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
Length = 349
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 5 DAVFHRLANDQYCTRN-RCIVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFD 62
DA F +L + + +++TGRGYPDI+TR +L+ KL L F L+DCDP+G +
Sbjct: 179 DATFQKLIGEGFLKLFPSTLLVTGRGYPDIATR----ILLNKLSNLQLFGLLDCDPHGIE 234
Query: 63 ILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKY 99
I TY++G+ + + + W+G + K+
Sbjct: 235 IAMTYKYGNCSKTFGVENQTLSHFEWIGLSRCELPKF 271
>gi|380495490|emb|CCF32355.1| type IIB DNA topoisomerase [Colletotrichum higginsianum]
Length = 344
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYG 60
DA F LA +Y + C I+ITG+GYPD+ T++FL L+ + K LP LVD D G
Sbjct: 158 DATFRTLAARRYYDTSTCGSGILITGKGYPDLVTKQFLHLIHDVKPELPILALVDYDYDG 217
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
I+ Y GS A++ + +P M WLG D
Sbjct: 218 IAIMRCYSHGSRGHAHERNTV-VPSMAWLGIKSGDL 252
>gi|313126398|ref|YP_004036668.1| DNA topoisomerase vi subunit a [Halogeometricum borinquense DSM
11551]
gi|448286242|ref|ZP_21477476.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
gi|312292763|gb|ADQ67223.1| DNA topoisomerase VI, subunit A [Halogeometricum borinquense DSM
11551]
gi|445575075|gb|ELY29557.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
Length = 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+V+ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 204 RLIENGFDEEYGCLVVHLKGQPARATRRITKRLHDELDLPVMVFTDGDPWSYRIYGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 264 GSIKSAHLSEYLATPEARFVGIQPQDIVDYDLPTDPLSDSDINALESELEDPRFMTDYWE 323
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L +E K E +A + F+++ Y+P ++
Sbjct: 324 EQIELQLDIEK-KAEQQALASRGLDFVTDTYLPERL 358
>gi|405124141|gb|AFR98903.1| endodeoxyribonuclease [Cryptococcus neoformans var. grubii H99]
Length = 511
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 27 GRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP- 84
G+G+PD++TR+ LRL+ + + + LVD DP+G IL+TY +GS AY + +P
Sbjct: 343 GKGFPDLATRQILRLIADAFPCVKMYALVDADPHGLKILSTYMYGSKANAYSTDYEDLPL 402
Query: 85 --EMHWLGAFPSDF 96
+ WLG SD+
Sbjct: 403 RDRVQWLGLRASDW 416
>gi|222479740|ref|YP_002565977.1| DNA topoisomerase VI subunit A [Halorubrum lacusprofundi ATCC
49239]
gi|222452642|gb|ACM56907.1| Spo11/DNA topoisomerase VI subunit A domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 361
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+VI +G P +TRR + + ++L +P D DP+ + I + +
Sbjct: 201 RLVENGFDEAYNCLVIHLKGQPARATRRITKRVHDELDVPVAVFADGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +K+L PE ++G P D +Y LP
Sbjct: 261 GSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPADPLADSDINALESELEDPRFQTDYWE 320
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L + G K E ++ + F+++ Y+P ++ +
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERLDAM 358
>gi|448730192|ref|ZP_21712502.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
gi|445793923|gb|EMA44488.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
Length = 367
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 32/156 (20%)
Query: 13 NDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSM 72
+D Y T IV+ +G P +TRR + L ++L LP D DP+ + I + +GS+
Sbjct: 214 DDDYGT----IVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSI 269
Query: 73 QMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------------------------KNC 105
+ A+ + +L PE ++G P D +Y LP +
Sbjct: 270 KSAHLSDYLATPEAQFIGIQPEDIVEYDLPTDPLSDSDINALESELTDPRFQTDYWREQI 329
Query: 106 RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
L+L +E K E ++ A F+++ Y+P ++ +
Sbjct: 330 ELQLDIEK-KAEQQSLAARGLDFVTDTYLPERLDAM 364
>gi|413933053|gb|AFW67604.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 251
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFL 39
+ VF RLAND++C RNRCIVITGRGYPDI TRR +
Sbjct: 213 ETVFQRLANDKFCERNRCIVITGRGYPDIPTRRHV 247
>gi|452840859|gb|EME42796.1| hypothetical protein DOTSEDRAFT_131971 [Dothistroma septosporum
NZE10]
Length = 342
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 23 IVITGRGYPDISTRRFLRLLIEK------LRLPTFCLVDCDPYGFDILTTYRFGSMQMAY 76
IV+TG+GYPD+STR L L P + L D DP G IL+TYR GS +A+
Sbjct: 185 IVLTGKGYPDLSTRALLHFLSTASPENGFASPPVYGLADFDPDGLSILSTYRRGSKSLAH 244
Query: 77 DAKFLRIPEMHWLG 90
+++ IP++ WLG
Sbjct: 245 ESEAHCIPQLQWLG 258
>gi|410720325|ref|ZP_11359681.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
gi|410601107|gb|EKQ55627.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
Length = 351
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+FHRL + + +++ +G +TRRFL+ + E+L LP + D DP+GF I
Sbjct: 189 GMFHRLVQENAYKKFDTLIVGLKGQAARATRRFLKRVNEELNLPVYICNDGDPWGFHIAM 248
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN 104
GS ++A+ L P+ +LG SD Y LP +
Sbjct: 249 VIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPTD 287
>gi|257051217|ref|YP_003129050.1| DNA topoisomerase VI subunit A [Halorhabdus utahensis DSM 12940]
gi|256689980|gb|ACV10317.1| DNA topoisomerase (ATP-hydrolyzing) [Halorhabdus utahensis DSM
12940]
Length = 370
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 210 RLVENGFDDEYNALVVHLGGQPARATRRLTKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 269
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +K+L PE ++G P D +Y LP
Sbjct: 270 GSIKSAHLSKYLATPEAQFIGVQPEDIVEYDLPTDPLADSDINALESELEDPRFQTDYWE 329
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L ++ K E +A + F+++ Y+P +++ +
Sbjct: 330 EQIELQLDIDK-KSEQQALASYGLDFVTDTYLPERLEAM 367
>gi|325181612|emb|CCA16062.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 77
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 14 DQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYR 68
D + R C+++TGRG+PD+STR F+R L + L++P L DC+P+G I+ ++R
Sbjct: 18 DSFIERLPCVLVTGRGFPDLSTRIFVRNLSDILQIPVLGLCDCNPFGLSIMVSFR 72
>gi|399574436|ref|ZP_10768195.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
gi|399240268|gb|EJN61193.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
Length = 364
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 204 RLVENGFDEEYNVLVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 264 GSIKSAHLSEYLATPEAEYVGIRPQDIVDYDLPTDPLADSDINALESELTDPRFQSEFWK 323
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F+++ Y+P ++
Sbjct: 324 EQIELQLDI-GKKAEQQALASRGLDFVTDTYLPERL 358
>gi|448469585|ref|ZP_21600267.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
gi|445808922|gb|EMA58973.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
Length = 361
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+VI +G P +TRR + + ++L +P D DP+ + I + +
Sbjct: 201 RLVENGFDEAYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +K+L PE ++G P D +Y LP
Sbjct: 261 GSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPADPLSDSDVNALESELDDPRFQTDYWE 320
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|435848696|ref|YP_007310946.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
gi|433674964|gb|AGB39156.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
Length = 363
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYASVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEAQYIGIQPADIVEYDLPTDPLSDSDINALESELDDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F+++ Y+P ++ +
Sbjct: 323 EQIELQLEIEK-KSEQQSLASRGLDFVTDTYLPERLDAM 360
>gi|336254127|ref|YP_004597234.1| type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
gi|335338116|gb|AEH37355.1| Type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
Length = 363
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDDEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEAQFIGIQPADIVEYELPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F++E Y+P ++ +
Sbjct: 323 EQIELQLEIEK-KSEQQSLASHGLDFVTETYLPERLDAM 360
>gi|225557184|gb|EEH05471.1| meiotic recombination protein spo11 [Ajellomyces capsulatus G186AR]
Length = 377
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 27 GRGYPDISTRRFLRLLIEK----------LRLPTFCLVDCDPYGFDILTTYRFGSMQMAY 76
G+GYPDISTR FL LL + P F LVD DP G I++TY++GS A+
Sbjct: 217 GKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIFMLVDGDPDGMAIMSTYKYGSRAQAH 276
Query: 77 DAKFLRIPEMHWLGAFPSDF 96
D L + + WLG S+
Sbjct: 277 DNTNLAVHNVQWLGLQASEL 296
>gi|110668560|ref|YP_658371.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|385804025|ref|YP_005840425.1| DNA topoisomerase VI subunit A (type II DNA topoisomerase)
[Haloquadratum walsbyi C23]
gi|109626307|emb|CAJ52765.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|339729517|emb|CCC40780.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi C23]
Length = 364
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+++ +G P +TRR + L ++L +P D DP+ + I + +
Sbjct: 204 RLIENGFDDMYNCLIVHLKGQPARATRRITKRLHDELSVPVVVFTDGDPWSYRIYGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 264 GSIKSAHLSEYLATPEARFIGIQPTDIVEYELPTDPLADSDVNALESELEDPRFQSEYWT 323
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F++E Y+P ++ +
Sbjct: 324 EQIELQLDIEK-KAEQQSLASRGLDFVTETYLPERLDDM 361
>gi|310799353|gb|EFQ34246.1| type IIB DNA topoisomerase [Glomerella graminicola M1.001]
Length = 420
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 6 AVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGF 61
A F LA +Y + C I++TG+GYPD+ T++FL L+ + K LP LVD D G
Sbjct: 229 ATFRTLAAARYWDASACGSGILVTGKGYPDLLTKQFLHLIHDVKPELPIMALVDYDSDGI 288
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
I+ Y GS A++ + +P M WLG D
Sbjct: 289 AIMRCYSHGSRGHAHERNTV-VPSMSWLGIKSGDL 322
>gi|448352990|ref|ZP_21541768.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
gi|445641057|gb|ELY94140.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
Length = 362
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 202 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYGSVAY 261
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 262 GSIKSAHLSEYLATPEAQYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTEYWE 321
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F+++ Y+P ++ +
Sbjct: 322 EQIELQLEIEK-KSEQQSLASHGLDFVTDTYLPERLDAM 359
>gi|448739099|ref|ZP_21721117.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
gi|445800248|gb|EMA50606.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
Length = 366
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 32/153 (20%)
Query: 13 NDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSM 72
+D Y T IV+ +G P +TRR + L ++L LP D DP+ + I + +GS+
Sbjct: 213 DDDYGT----IVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSI 268
Query: 73 QMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------------------------KNC 105
+ A+ + +L PE ++G P+D +Y LP +
Sbjct: 269 KSAHLSDYLATPEAQFVGIQPTDIVEYDLPTDPLADSDINALESELSDPRFQTDYWREQI 328
Query: 106 RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L +E K E +A + F+++ Y+P ++
Sbjct: 329 ELQLDIEK-KAEQQALASRGLDFVTDTYLPERL 360
>gi|448346429|ref|ZP_21535314.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
gi|445632632|gb|ELY85843.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
Length = 363
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYDALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEADFIGIQPADIVEYELPTDPLSDSDINALESELEDPRFQTEYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
K L+L + G K E ++ + F++E Y+P ++
Sbjct: 323 KQIELQLDL-GKKSEQQSLASHGLDFVTETYLPERL 357
>gi|378728531|gb|EHY54990.1| meiotic recombination protein SPO11 [Exophiala dermatitidis
NIH/UT8656]
Length = 386
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRLP--TFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
+++T +GYPD++TR FLR L + R P F L D DP G IL Y +GS ++A +
Sbjct: 225 LLVTAKGYPDLATRHFLRNLADHARTPIQIFGLFDWDPDGIQILKCYLYGSKRLAQEHCC 284
Query: 81 LRIPEMHWLGAFPSDFEK 98
+ +PEM W+G D +
Sbjct: 285 I-LPEMKWIGIRAHDIHR 301
>gi|383624785|ref|ZP_09949191.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|448697205|ref|ZP_21698283.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|445781584|gb|EMA32436.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
Length = 363
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDDEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEAQFIGIQPADIVEYELPTDPLSDSDVNALESELEDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L +E K E ++ + F++E Y+P ++
Sbjct: 323 EQIELQLEIEK-KSEQQSLASHGLDFVTETYLPERL 357
>gi|145353167|ref|XP_001420895.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581131|gb|ABO99188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 287
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKL-------RLPTFCLVDCD 57
DAVF+RL ++ + C+++T +G+PD++TR+FL LL L F LVD +
Sbjct: 112 DAVFNRLCAERVFEKLPCVLVTAKGFPDLATRKFLHLLRRALEDNDRGNEAQFFGLVDWN 171
Query: 58 PYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
P G IL+TY G+ A D P + W+G D
Sbjct: 172 PSGCWILSTYTVGNSSSAMDVSEYVTP-LKWIGLRSQDL 209
>gi|429190415|ref|YP_007176093.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|448326327|ref|ZP_21515693.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
gi|429134633|gb|AFZ71644.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|445612542|gb|ELY66263.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
Length = 363
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALIVHLKGQPARATRRITKRLRDELSLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPQAQFIGVQPADIVEYDLPTDPLSDSDKNALESELSDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L +E K E ++ + F++E Y+P ++
Sbjct: 323 EQIELQLEIEK-KSEQQSLASHGLDFVTETYLPERL 357
>gi|164426175|ref|XP_961027.2| hypothetical protein NCU01120 [Neurospora crassa OR74A]
gi|157071228|gb|EAA31791.2| hypothetical protein NCU01120 [Neurospora crassa OR74A]
Length = 404
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 26 TGRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
+G+GYPD++TR+FL + + RL F LVD DP+G +L TY++GS ++ ++ + ++
Sbjct: 202 SGKGYPDLATRKFLAAIHSVRPRLLMFALVDFDPHGISVLRTYQYGSQRLDHEER-TKVF 260
Query: 85 EMHWLGAFPSD 95
+ WLG SD
Sbjct: 261 GLRWLGIRSSD 271
>gi|398393738|ref|XP_003850328.1| hypothetical protein MYCGRDRAFT_45713, partial [Zymoseptoria
tritici IPO323]
gi|339470206|gb|EGP85304.1| hypothetical protein MYCGRDRAFT_45713 [Zymoseptoria tritici IPO323]
Length = 272
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 5 DAVFHRLANDQY--CTRNRCIVITGRGYPDISTRRFLRLLIEKLRL------PTFCLVDC 56
+A F +A + T + I++T +GYPD+++R LR + P F L D
Sbjct: 96 EATFRSIAASMFWETTASEGIILTAKGYPDLASRALLRFVSHPSTKNGFASPPVFGLADF 155
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
DP G IL+TY+ GS +A+++ +P++ WLG
Sbjct: 156 DPDGVAILSTYKHGSKALAHESDGHSVPQLQWLG 189
>gi|448414640|ref|ZP_21577653.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
gi|445681749|gb|ELZ34177.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
Length = 364
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + T + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 204 RLVENGFDTEHDALVVHLGGQPARATRRLTKRLHDELGLPVVVFTDGDPWSYRIYGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 264 GSIKSAHLSEYLATPEAKFIGIQPQDIVDYDLPTDPLSDSDVNALESELEDPRFMTDYWE 323
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ +L+L + K E ++ A F+++ Y+P ++
Sbjct: 324 EQIQLQLDI-NKKAEQQSLAARGLDFVTDTYLPERL 358
>gi|448373989|ref|ZP_21557874.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
gi|445660666|gb|ELZ13461.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
Length = 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR ++ + +L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDEYNSIVVHLGGQPARATRRLIKRMRNELDLPVVVFADGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D +Y LP
Sbjct: 266 GSIKSAHLSEYLATPDAQYIGIRPEDIVEYDLPTDPLSDSDVNALESELEDPRFQTEFWE 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ L+L +E K E ++ A F+++ Y+P++++
Sbjct: 326 EQIELQLEIEK-KSEQQSLAARGLDFVTDTYLPTRLE 361
>gi|257388767|ref|YP_003178540.1| DNA topoisomerase [Halomicrobium mukohataei DSM 12286]
gi|257171074|gb|ACV48833.1| DNA topoisomerase (ATP-hydrolyzing) [Halomicrobium mukohataei DSM
12286]
Length = 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDEYDSIVVHLGGQPARATRRLTKRLHDELDLPVVVFTDGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D +Y LP
Sbjct: 266 GSIKSAHLSEYLATPEAQFIGIRPEDIVEYDLPTDPLSDSDINALESELEDPRFQTEFWE 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F+++ Y+P ++
Sbjct: 326 EQIELQLDI-GKKSEQQALASRGLDFVTDTYLPERL 360
>gi|116199071|ref|XP_001225347.1| hypothetical protein CHGG_07691 [Chaetomium globosum CBS 148.51]
gi|88178970|gb|EAQ86438.1| hypothetical protein CHGG_07691 [Chaetomium globosum CBS 148.51]
Length = 1001
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 27 GRGYPDISTRRFLRLLIEKLR--LPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
+G+PD++TRRFL + I LR L F LVD DP+G I+ TYR+GS ++ ++ +P
Sbjct: 76 AKGFPDLTTRRFLSV-ISTLRPQLDLFILVDFDPHGVAIMRTYRYGSRRLDHEEN-ATVP 133
Query: 85 EMHWLGAFPSD 95
+ WLG D
Sbjct: 134 RLRWLGIVSDD 144
>gi|433638425|ref|YP_007284185.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
gi|433290229|gb|AGB16052.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
Length = 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR ++ + +L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDEYNSIVVHLGGQPARATRRLIKRMRNELDLPVVVFADGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D +Y LP
Sbjct: 266 GSIKSAHLSEYLATPDAQYIGIRPEDIVEYDLPTDPLSDSDVNALESELEDPRFQTEFWE 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
+ L+L +E K E ++ A F+++ Y+P++++
Sbjct: 326 EQIELQLEIEK-KSEQQSLAARGLDFVTDTYLPTRLE 361
>gi|91773183|ref|YP_565875.1| DNA topoisomerase VI subunit A [Methanococcoides burtonii DSM 6242]
gi|91712198|gb|ABE52125.1| DNA topoisomerase, type VI subunit A [Methanococcoides burtonii DSM
6242]
Length = 373
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + I++ +G P STRR ++ + E+L +P D DP+ + I
Sbjct: 209 GMYARLIENGFDEKYNAILVHLKGQPARSTRRLIKRMNEELGIPVVVFTDGDPWSYRIFA 268
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P ++G P+D +Y L
Sbjct: 269 SVAYGAIKSAHLSEFMATPAAKFIGVQPTDIVEYELSTDKLTDKDVDALRSELTDPRFAN 328
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L+++ K E +AF F+++ Y+P+++
Sbjct: 329 DYWKEQISLQLSIKK-KAEQQAFAGKGLDFVTDTYLPNRL 367
>gi|448339320|ref|ZP_21528348.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
gi|445620549|gb|ELY74045.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
Length = 363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEQYNALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEADFIGIQPADIVEYELPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E ++ + F++E Y+P ++
Sbjct: 323 EQIELQLDL-GKKSEQQSLASHGLDFVTETYLPERL 357
>gi|116753913|ref|YP_843031.1| DNA topoisomerase VI subunit A [Methanosaeta thermophila PT]
gi|116665364|gb|ABK14391.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanosaeta
thermophila PT]
Length = 357
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRRF++ L +L LP D DP+ + I
Sbjct: 193 GMYARLIENGFDEEFDAILVHLKGQPARSTRRFIKRLNTELGLPVAVFTDGDPWSYRIFA 252
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN--------------------- 104
+ +G+++ A+ ++ L P+ +LG P+D +Y L +
Sbjct: 253 SVAYGAIKSAHLSEHLATPDARFLGVQPTDIVEYNLSTDKLTDRDLHALRAELTDPRFGS 312
Query: 105 ----CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+++L ++ K E +AF F++++Y+P ++
Sbjct: 313 DYWQMQIQLQIDLKKKAEQQAFAGKGLDFVTKRYLPERL 351
>gi|289580321|ref|YP_003478787.1| DNA topoisomerase [Natrialba magadii ATCC 43099]
gi|448283992|ref|ZP_21475257.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
gi|289529874|gb|ADD04225.1| DNA topoisomerase (ATP-hydrolyzing) [Natrialba magadii ATCC 43099]
gi|445572087|gb|ELY26629.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
Length = 362
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 202 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYGSVAY 261
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 262 GSIKSAHLSEYLATPEAKYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTEYWE 321
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F+++ Y+P ++ +
Sbjct: 322 EQIELQLEIEK-KSEQQSLASHGLDFVTDTYLPERLDAM 359
>gi|448562314|ref|ZP_21635353.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|448585464|ref|ZP_21647857.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
gi|445719518|gb|ELZ71198.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|445726164|gb|ELZ77781.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
Length = 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L +L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDEYNVLIVHLKGQPARATRRITKRLHNELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ ++ L PE ++G P D Y LP
Sbjct: 266 GSIKSAHLSEHLATPEARFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMSDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|448385303|ref|ZP_21563809.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
gi|445656798|gb|ELZ09630.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
Length = 351
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 191 RLVENGFDEEFNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 250
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 251 GSIKSAHLSEYLATPEADFIGIQPADIVEYDLPSDPLSDSDINALESELEDPRFQTDYWE 310
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ A F+++ Y+P ++
Sbjct: 311 EQIELQLDL-GKKSEQQSLAARGLDFVTDTYLPERL 345
>gi|448603024|ref|ZP_21656845.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
gi|445746220|gb|ELZ97682.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
Length = 366
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPEAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMGDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|433590828|ref|YP_007280324.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
gi|433305608|gb|AGB31420.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
Length = 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEFNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPEADFIGIQPADIVEYDLPSDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ A F+++ Y+P ++
Sbjct: 323 EQIELQLDL-GKKSEQQSLAARGLDFVTDTYLPERL 357
>gi|322370368|ref|ZP_08044927.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
gi|320550076|gb|EFW91731.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
Length = 364
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + I++ G P +TRR + L E+L LP D DP+ + I + +
Sbjct: 204 RLVENGFDEEYNTIIVHLGGQPARATRRLTKRLHEELDLPVTVFTDGDPWSYRIYGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------KNC---------------- 105
GS++ A+ + +L PE ++G P D +Y LP KN
Sbjct: 264 GSIKSAHLSDYLATPEAKFIGIQPKDIVEYDLPTDPLSDSDKNALESELEDPRYQTDYWE 323
Query: 106 ---RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L +E K E +A + F+++ Y+P ++
Sbjct: 324 EQIELQLDIEK-KSEQQALASHGLDFVTDTYLPERL 358
>gi|448624639|ref|ZP_21670587.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
gi|445749844|gb|EMA01286.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
Length = 366
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPEAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMGDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|335433682|ref|ZP_08558500.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
gi|334898485|gb|EGM36591.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
Length = 370
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 210 RLVENGFDDEYNALVVHLGGQPARATRRLTKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 269
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +K+L PE ++G P D +Y LP
Sbjct: 270 GSIKSAHLSKYLATPEAQFIGVQPEDIVEYDLPTDPLADSDVNALESELEDPRFQTDYWE 329
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L ++ K E +A + F+++ Y+P ++
Sbjct: 330 EQIELQLDIDK-KSEQQALASYGLDFVTDTYLPERL 364
>gi|409728295|ref|ZP_11271162.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|448721868|ref|ZP_21704411.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|445790940|gb|EMA41590.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
Length = 366
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDEDFSTLVVHLGGQPARATRRIIKRLHDELDLPVVVFTDGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 266 GSIKSAHLSEYLATPEARFIGIQPADIVEYDLPTDPLSDSDINALESELTDPRFQTDYWR 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L + G K E ++ A F+++ Y+P ++ +
Sbjct: 326 EQIELQLDI-GKKAEQQSLAARGLDFVTDTYLPERLTAM 363
>gi|433426699|ref|ZP_20406922.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
gi|432196864|gb|ELK53285.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
Length = 192
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 38 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 97
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 98 GSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPTDPLADSDINALESELEDPRFMGDYWT 157
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 158 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 192
>gi|448727753|ref|ZP_21710102.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
gi|445789739|gb|EMA40418.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
Length = 366
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 32/153 (20%)
Query: 13 NDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSM 72
+D Y T IV+ +G P +TRR + L +L LP D DP+ + I + +GS+
Sbjct: 213 DDDYGT----IVVHLKGQPARATRRITKRLHNELDLPVVVFTDGDPWSYRIYGSVAYGSI 268
Query: 73 QMAYDAKFLRIPEMHWLGAFPSDFEKYGLP---------------------------KNC 105
+ A+ + +L PE ++G P+D +Y LP +
Sbjct: 269 KSAHLSDYLATPEAKFVGIQPTDIVEYDLPTDPLADSDINALESELSDPRFQTDYWREQI 328
Query: 106 RLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E +A + F+++ Y+P ++
Sbjct: 329 ELQLDI-GKKAEQQALASRGLDFVTDTYLPERL 360
>gi|448688770|ref|ZP_21694507.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
gi|445778640|gb|EMA29582.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 208 RLVENGFDDEYDALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSY 267
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D +Y LP
Sbjct: 268 GSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPTDPLADSDVNALESELEDPRFQTDFWE 327
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + K E +A + F++E Y+P ++
Sbjct: 328 EQIELQLDI-NKKAEQQALASRGLDFVTETYLPERL 362
>gi|448576109|ref|ZP_21642152.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
gi|445729789|gb|ELZ81383.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
Length = 366
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L +L LP D DP+ + I + +
Sbjct: 206 RLIENGFDDDYNALIVHLKGQPARATRRITKRLRNELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPDARFVGIQPQDIVDYDLPTDPLSDSDINALESELDDPRFMSDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A A F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALAARGLDFVTDEYLPTRL 360
>gi|55377344|ref|YP_135194.1| DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC 43049]
gi|448640229|ref|ZP_21677283.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|448649278|ref|ZP_21679991.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
gi|68053279|sp|Q5V4R4.1|TOP6A_HALMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|55230069|gb|AAV45488.1| type II DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC
43049]
gi|445762019|gb|EMA13253.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|445773922|gb|EMA24951.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 208 RLVENGFDDEYDALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSY 267
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D +Y LP
Sbjct: 268 GSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPTDPLSDSDVNALESELEDPRFQTDFWE 327
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + K E +A + F++E Y+P ++
Sbjct: 328 EQIELQLDI-NKKAEQQALASRGLDFVTETYLPERL 362
>gi|448678347|ref|ZP_21689354.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
gi|445772334|gb|EMA23379.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 208 RLVENGFDDEYDALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSY 267
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D +Y LP
Sbjct: 268 GSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPTDPLADSDVNALESELEDPRFQTDFWE 327
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + K E +A + F++E Y+P ++
Sbjct: 328 EQIELQLDI-NKKAEQQALASRGLDFVTETYLPERL 362
>gi|386000804|ref|YP_005919103.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
gi|357208860|gb|AET63480.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
Length = 360
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + I++ +G P STRR ++ L E+L LP D DP+ + I + +
Sbjct: 200 RLIENGFDQEHDAILVHLKGQPARSTRRLIKRLNEELSLPVVIFTDGDPWSYRIYASVAY 259
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI----------- 118
G+++ AY + +L P ++G P+D Y L + ++ ++ E+
Sbjct: 260 GAIKSAYLSDYLVTPAAQFVGVQPTDIVNYDLSTDKLTDQDLQALRSELADPRFATDYWK 319
Query: 119 ---------------EAFCACSFSFLSEKYIPSKI 138
+AF F+++ Y+P ++
Sbjct: 320 EQIQLQIKLSKKAEQQAFAGKGLDFVTKTYLPERL 354
>gi|344211460|ref|YP_004795780.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|448667080|ref|ZP_21685681.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
gi|343782815|gb|AEM56792.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|445770602|gb|EMA21661.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 208 RLVENGFDDEYDALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSY 267
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D +Y LP
Sbjct: 268 GSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPTDPLSDSDVNALESELEDPRFQTDFWE 327
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + K E +A + F++E Y+P ++
Sbjct: 328 EQIELQLDI-NKKAEQQALASRGLDFVTETYLPERL 362
>gi|448720888|ref|ZP_21703482.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
gi|445780501|gb|EMA31383.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
Length = 363
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALVVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEAQFIGIQPADIVEYELPTDPLSDSDKNALESELSDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L +E K E ++ + F+++ Y+P ++
Sbjct: 323 EQIELQLEIEK-KSEQQSLASRGLDFVTDTYLPERL 357
>gi|413933055|gb|AFW67606.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 365
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTR 36
+ VF RLAND++C RNRCIVITGRGYPDI TR
Sbjct: 197 ETVFQRLANDKFCERNRCIVITGRGYPDIPTR 228
>gi|397772615|ref|YP_006540161.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|448340243|ref|ZP_21529216.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
gi|397681708|gb|AFO56085.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|445630549|gb|ELY83810.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
Length = 363
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEADFIGIQPADIVEYELPTDPLSDSDINALESELEDPRFQTEYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E ++ + F++E Y+P ++
Sbjct: 323 EQIELQLDL-GKKSEQQSLASHGLDFVTETYLPERL 357
>gi|448502260|ref|ZP_21612533.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
gi|445694416|gb|ELZ46545.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
Length = 361
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 201 RLVENGFDEEHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSDPLSDSDINALESELEDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448591217|ref|ZP_21650896.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
gi|445733773|gb|ELZ85338.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
Length = 366
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L +L LP D DP+ + I + +
Sbjct: 206 RLIENGFDDDYNALIVHLKGQPARATRRITKRLRNELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPDARFVGIQPQDIVDYDLPTDPLSDSDINALESELEDPRFMSDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A A F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALAARGLDFVTDEYLPTRL 360
>gi|448357876|ref|ZP_21546571.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
gi|445648184|gb|ELZ01146.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
Length = 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L +L LP D DP+ + I + +
Sbjct: 202 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHNELDLPVTVFADGDPWSYRIYGSVAY 261
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 262 GSIKSAHLSEYLATPEAKYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTEYWE 321
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F+++ Y+P ++ +
Sbjct: 322 EQIELQLEIEK-KSEQQSLASHGLDFVTDTYLPERLDAM 359
>gi|435850856|ref|YP_007312442.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
gi|433661486|gb|AGB48912.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
Length = 369
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + I++ +G P STRR ++ + E+L LP D DP+ + I
Sbjct: 205 GMYARLIENGFDEKYNAILVHLKGQPARSTRRIIKRMNEELSLPVVVFTDGDPWSYRIFA 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGV----------- 114
+ +G+++ A+ ++ + P ++G PSD +Y L + KLT + V
Sbjct: 265 SVAYGAIKSAHLSEHMATPGAMFIGVQPSDIVEYELSTD---KLTEKDVGALRSELSDPR 321
Query: 115 ------------------KFEIEAFCACSFSFLSEKYIPSKI 138
K E +AF F++++Y+P ++
Sbjct: 322 FATDYWKEQINLQLEINKKAEQQAFAGKGLDFVTDRYLPDRL 363
>gi|448438357|ref|ZP_21587849.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
gi|445679178|gb|ELZ31651.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
Length = 361
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 201 RLVENGFDEEHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSDPLADSDINALESELEDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|451999964|gb|EMD92426.1| hypothetical protein COCHEDRAFT_1193911 [Cochliobolus
heterostrophus C5]
Length = 730
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 13 NDQY-CTRNRCIVI---TGRGYPDISTRRFLRLL-IEKLRLPTFCLVDCDPYGFDILTTY 67
ND + T + I+I +GYPD+++R+FLR L +P F LVD DP G IL+TY
Sbjct: 14 NDSWDLTEIQWILIIEKEAKGYPDVASRQFLRQLGTNAHHIPMFVLVDLDPDGIAILSTY 73
Query: 68 RFGSMQMAYD------AKFLRIPEMHWLG 90
++GS ++ ++ L +P + WLG
Sbjct: 74 KYGSYRLMHEDVALMNTSALCLPNVQWLG 102
>gi|448410255|ref|ZP_21575120.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
gi|445671951|gb|ELZ24530.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDDEHDALVVHLGGQPARATRRLTKRLHDELDLPVTVFTDGDPWSYRIFGSVSY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEIE 119
GS++ A+ +++L PE ++G P D +Y LP + V ++ E+E
Sbjct: 263 GSIKSAHLSEYLATPEAQFIGVQPEDIVEYDLPTDPLSDSDVNALESELE 312
>gi|410672036|ref|YP_006924407.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
gi|409171164|gb|AFV25039.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + +++ +G P STRR ++ + ++L+LP D DP+ + I
Sbjct: 205 GMYARLIENGFDEKYNAVLVHLKGQPARSTRRIIKRMNDELKLPVVVFTDGDPWSYRIFA 264
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN---------CRLKLT------ 110
+ +G+++ A+ ++ + P ++G PSD +Y L + R +LT
Sbjct: 265 SVAYGAIKSAHLSEHMATPGAQFIGVQPSDIVEYELSTDKLTDKDVAALRSELTDPRFET 324
Query: 111 ---VEGVKFEIE--------AFCACSFSFLSEKYIPSKI 138
E + ++E AF F+++ Y+P+++
Sbjct: 325 DYWKEQINLQLEINKKAEQQAFAGKGLDFVTDTYLPNRL 363
>gi|448348507|ref|ZP_21537356.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|448369502|ref|ZP_21556054.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
gi|445642874|gb|ELY95936.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|445650677|gb|ELZ03593.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYDAIVVHLGGQPARATRRLTKRFHDELGLPVVVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPEADYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+++L +E G K E ++ + F+++ Y+P ++ +
Sbjct: 323 EQIELQLEIGKKSEQQSLASHGLDFVTDTYLPERLDAM 360
>gi|448361959|ref|ZP_21550572.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
gi|445649639|gb|ELZ02576.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYDAIVVHLGGQPARATRRLTKRFHDELGLPVVVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 263 GSIKSAHLSEYLATPEADYIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+++L +E G K E ++ + F+++ Y+P ++ +
Sbjct: 323 EQIELQLEIGKKSEQQSLASHGLDFVTDTYLPERLDAM 360
>gi|354611442|ref|ZP_09029398.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
gi|353196262|gb|EHB61764.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
Length = 364
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + C+V+ G P +TRR + L +++ LP D DP+ + I + +
Sbjct: 204 RLVENGFDGEYNCLVVHLGGQPARATRRLTKRLHDEVGLPVTVFTDSDPWSYRIFGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D Y LP
Sbjct: 264 GSIKSAHLSEYLATPEAQFIGIRPEDIVDYELPTDPLSDSDINALESELEDPRFQSDFWT 323
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L ++ K E +A + F+++ Y+P ++
Sbjct: 324 EQIELQLDIDK-KAEQQALASRGLDFVTDTYLPERL 358
>gi|448318072|ref|ZP_21507608.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
gi|445600500|gb|ELY54508.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
Length = 251
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 91 RLVENGFDEEYDAIVVHLGGQPARATRRLTKRFHDELDLPVVVFTDGDPWSYRIYGSVAY 150
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +++L PE ++G P+D +Y LP +
Sbjct: 151 GSIKSAHLSEYLATPEAKFIGIQPADIVEYDLPTDPLSDSDVNALESELEDPRFQTDYWE 210
Query: 105 CRLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+++L +E G K E ++ + F+++ Y+P ++
Sbjct: 211 EQIELQLEIGKKSEQQSLASRGLDFVTDTYLPERL 245
>gi|402081027|gb|EJT76172.1| meiosis-specific topoisomerase Spo11 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 433
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 10 RLANDQYCTRNRCIVIT--GRGYPDISTRRFLRLLIEKLR--LPTFCLVDCDPYGFDILT 65
RL + ++ +VI G+GYPD+ TRRFL + + R +P + LVD DPYG IL
Sbjct: 220 RLRHVEWSRAQWILVIEKEGKGYPDLCTRRFL-FSLHQSRPYIPVYGLVDYDPYGIRILR 278
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKY 99
Y+ GS + ++ + + +HWLG +D Y
Sbjct: 279 NYQRGSANLQHE-RDCTVSTIHWLGIRLADIRSY 311
>gi|284165559|ref|YP_003403838.1| DNA topoisomerase [Haloterrigena turkmenica DSM 5511]
gi|284015214|gb|ADB61165.1| DNA topoisomerase (ATP-hydrolyzing) [Haloterrigena turkmenica DSM
5511]
Length = 364
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 204 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 263
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 264 GSIKSAHLSEYLATPEAKFIGIQPADIVEYELPTDPLSDSDINALESELEDPRFQTDYWE 323
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L +E K E ++ + F+++ Y+P ++ +
Sbjct: 324 EQIELQLDIEK-KSEQQSLASHGLDFVTDTYLPERLDDM 361
>gi|448479369|ref|ZP_21604221.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
gi|445822647|gb|EMA72411.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
Length = 361
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 201 RLVENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSDPLSDSDINALESELDDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448491669|ref|ZP_21608509.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
gi|445692669|gb|ELZ44840.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
Length = 361
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 201 RLVENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSDPLSDSDINALESELEDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448423790|ref|ZP_21582123.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|448448963|ref|ZP_21591461.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
gi|448506626|ref|ZP_21614582.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|448524343|ref|ZP_21619325.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445683047|gb|ELZ35452.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|445699576|gb|ELZ51600.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|445700413|gb|ELZ52414.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445814055|gb|EMA64027.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
Length = 361
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 201 RLVENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSDPLSDSDINALESELEDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448570959|ref|ZP_21639470.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
gi|445722877|gb|ELZ74528.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMGDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|169624501|ref|XP_001805656.1| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
gi|160705184|gb|EAT77175.2| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
Length = 319
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Query: 28 RGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDILTTYRFGSMQMAY------DAKF 80
+GYPD+++R FLR + ++ ++P F LVD DP G I++TY++GS ++A+ +
Sbjct: 138 KGYPDVASRLFLRRVADQAPKIPMFALVDLDPDGMAIMSTYKYGSYRLAHEDTTRKETSG 197
Query: 81 LRIPEMHWLG 90
L +P + W+G
Sbjct: 198 LSLPSIQWIG 207
>gi|292655720|ref|YP_003535617.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|448289706|ref|ZP_21480869.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|291370288|gb|ADE02515.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|445581223|gb|ELY35584.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMGDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|448540823|ref|ZP_21623744.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|448549126|ref|ZP_21627902.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|448555700|ref|ZP_21631629.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
gi|445708976|gb|ELZ60811.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|445713815|gb|ELZ65590.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|445717223|gb|ELZ68941.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMGDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|448595855|ref|ZP_21653302.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
gi|445742309|gb|ELZ93804.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
Length = 366
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPTDPLADSDINALQSELEDPRFMGDYWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F++++Y+P+++
Sbjct: 326 EQIELQLDI-GKKAEQQALASRGLDFVTDEYLPTRL 360
>gi|448529391|ref|ZP_21620529.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
gi|445709153|gb|ELZ60986.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
Length = 361
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + +V+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 201 RLVENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAY 260
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKN------------------------- 104
GS++ A+ +K+L PE ++G P D +Y LP +
Sbjct: 261 GSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSDPLSDSDINALESELEDPRFQTDYWE 320
Query: 105 --CRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
L+L + G K E ++ + F+++ Y+P ++
Sbjct: 321 EQIELQLDI-GKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448311914|ref|ZP_21501667.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
gi|445603535|gb|ELY57497.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
Length = 362
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 202 RLVENGFDDEYNALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAY 261
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 262 GSIKSAHLSEYLATPEAKFIGIQPADIVEYELPTDPLSDSDVNALESELEDPRFQTDYWE 321
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L +E K E ++ + F+++ Y+P ++
Sbjct: 322 EQIELQLEIEK-KSEQQSLASHGLDFVTDTYLPERL 356
>gi|448330003|ref|ZP_21519296.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
gi|445612991|gb|ELY66706.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
Length = 363
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +++ +G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYNALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEADFIGIQPADIVEYELPTDPLADSDINALESELEDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E ++ + F+++ Y+P ++
Sbjct: 323 EQIELQLDL-GKKSEQQSLASHGLDFVTDTYLPERL 357
>gi|408397704|gb|EKJ76844.1| hypothetical protein FPSE_03030 [Fusarium pseudograminearum CS3096]
Length = 387
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 6 AVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGF 61
AVF L + Q+ + +++T +GYPD++TR FL L+ + +LP L D DP G
Sbjct: 191 AVFRSLCSSQFWRVSLSGPGVLVTAKGYPDLTTRSFLNLVSTRYPQLPILGLFDFDPDGV 250
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
I+ YR+GS +++++A L + WLG
Sbjct: 251 KIMRCYRYGSDRLSHEAD-LGTETLQWLG 278
>gi|330507581|ref|YP_004384009.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
gi|328928389|gb|AEB68191.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
Length = 375
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + I++ +G P STRR ++ L +L LP D DP+ + I
Sbjct: 211 GMYARLIENGFDEEYNAILVHIKGQPARSTRRIIKRLNTELNLPVVVFTDGDPWSYRIFA 270
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEI------- 118
+ +G+++ A+ + L P+ +LG PSD Y L + ++ +K E+
Sbjct: 271 SIAYGAIKSAHLSDHLVTPKARFLGVQPSDIVDYNLSTDKLTDRDLQALKSELSDPRFAN 330
Query: 119 -------------------EAFCACSFSFLSEKYIPSKI 138
+AF F+++ Y+P ++
Sbjct: 331 PYWEKQIHLQIDLKKKAEQQAFAGKGLDFVTKTYLPDRL 369
>gi|448627572|ref|ZP_21672038.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
gi|445758880|gb|EMA10176.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
Length = 368
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + +V+ G P +TRR ++ L ++L LP D DP+ + I + +
Sbjct: 208 RLVENGFDDEYDALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSY 267
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P D +Y LP
Sbjct: 268 GSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPTDPLADSDVNALESELEDPRFQTDFWE 327
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + K E +A + F+++ Y+P ++
Sbjct: 328 EQIELQLDI-NKKAEQQALASRGLDFVTDTYLPERL 362
>gi|424811565|ref|ZP_18236816.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757291|gb|EGQ40872.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalinarum sp.
J07AB56]
Length = 524
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
A+ +RL + Y + I+I G P TRR + +L E+L LP + D DPYG+ I +
Sbjct: 200 ALVNRLVEEDYHEKEDAIIIGAGGQPSRGTRRLVNILHERLDLPVYVFTDADPYGYYIYS 259
Query: 66 TYRFGSMQMA 75
+ GSM +A
Sbjct: 260 VLKSGSMSLA 269
>gi|452981949|gb|EME81708.1| hypothetical protein MYCFIDRAFT_138655, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 361
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 5 DAVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLLIEKLRLPTFC------LVDC 56
+A F +A + + + I++TG+GYPD+S+R LR L F L D
Sbjct: 181 EATFRSIAGSELWSTIIRQGIIMTGKGYPDLSSRAMLRFLSRPSLQNGFSSPLVYGLADF 240
Query: 57 DPYGFDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
DP G IL Y+ GS +A++++ PEM WLG
Sbjct: 241 DPDGIAILCVYKHGSKALAHESRDHAAPEMEWLG 274
>gi|336476700|ref|YP_004615841.1| DNA topoisomerase [Methanosalsum zhilinae DSM 4017]
gi|335930081|gb|AEH60622.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosalsum zhilinae DSM
4017]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL + + + I++ +G P STRR ++ + ++L +P D DP+ + I
Sbjct: 207 GMYARLIENGFDEKYNAILVHLKGQPARSTRRLIKRMNDELGIPVAVFTDGDPWSYRIYA 266
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----------------------- 102
+ +G+++ A+ ++F+ P ++G PSD +Y L
Sbjct: 267 SIAYGAIKSAHLSEFMATPSAKFVGVQPSDIVEYELSTDKLTEKDISALRSELSDPRFET 326
Query: 103 ----KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L ++ K E +AF F+++ Y+P ++ +
Sbjct: 327 DYWKEQINLQLEIQK-KAEQQAFAGKGLDFVTDVYLPERLADI 368
>gi|453083573|gb|EMF11618.1| DNA topoisomerase IV, alpha subunit [Mycosphaerella populorum
SO2202]
Length = 341
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRL------PTFCLVDCDPYGFDILTTYRFGSMQMAY 76
++ITG+GYPD++TR LR P + L D DP G IL+TY+ GS ++A+
Sbjct: 183 VIITGKGYPDLATRALLRYCSHPSAQNGFASPPVYGLADFDPDGIAILSTYKRGSKKLAH 242
Query: 77 DAKFLRIPEMHWLG 90
++K +P++ WLG
Sbjct: 243 ESKEHVVPQLKWLG 256
>gi|448733641|ref|ZP_21715883.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
gi|445802161|gb|EMA52468.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
Length = 412
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 207 RLVENGFDEDFNTIVVHLGGQPARATRRLTKRLHDELDLPVVVFTDGDPWSYRIYGSVAY 266
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ + +L PE ++G P D +Y LP
Sbjct: 267 GSIKSAHLSNYLATPEAQFIGIQPEDIVEYDLPTDPLADSDVNALESELTDPRFQTDYWR 326
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGV 141
+ L+L + K E ++ A F+++ Y+P ++ +
Sbjct: 327 EQIELQLDI-NKKAEQQSLAARGLDFVTDTYLPERLDAM 364
>gi|363752201|ref|XP_003646317.1| hypothetical protein Ecym_4458 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889952|gb|AET39500.1| hypothetical protein Ecym_4458 [Eremothecium cymbalariae
DBVPG#7215]
Length = 367
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIE----KLRLPTFCLVDCDPYG 60
DAVFH+LA D +++ I++TG+GYPD TR FLR L++ +++ FC D DPYG
Sbjct: 208 DAVFHKLARDAQYNKDK-ILVTGKGYPDHLTRIFLRQLLKVAPAHIQVEAFC--DSDPYG 264
Query: 61 FDI 63
DI
Sbjct: 265 IDI 267
>gi|336472796|gb|EGO60956.1| hypothetical protein NEUTE1DRAFT_98113 [Neurospora tetrasperma FGSC
2508]
Length = 454
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 27 GRGYPDISTRRFLRLLIE-KLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPE 85
G+GYPD++TR+FL + + RL F LVD DP+G +L TY++ S ++ ++ + ++
Sbjct: 255 GKGYPDLATRKFLATIHSVRPRLLMFALVDFDPHGISVLRTYQYSSQRLDHEER-TKVFG 313
Query: 86 MHWLGAFPSD 95
+ WLG SD
Sbjct: 314 LRWLGIRSSD 323
>gi|448391960|ref|ZP_21567055.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
gi|445665372|gb|ELZ18050.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
Length = 363
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + ++L LP D DP+ + I + +
Sbjct: 203 RLVENGFDEEYDAIVVHLGGQPARATRRLTKRFHDELGLPVVVFTDGDPWSYRIYGSVAY 262
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L PE ++G P+D +Y LP
Sbjct: 263 GSIKSAHLSEYLATPEAKFIGIQPADIVEYDLPTDPLSDSDINALESELEDPRFQTDYWE 322
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L +E K E ++ + F+++ Y+P ++
Sbjct: 323 EQIELQLDIEK-KSEQQSLASHGLDFVTDTYLPERL 357
>gi|145967206|gb|ABP98995.1| meiotic transesterase, partial [Trichomonas vaginalis]
Length = 73
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLR 82
I+IT RG PD +TR F+RLL + L +P L D D YG I+ +++GSM A D +
Sbjct: 9 ILITPRGVPDYNTRYFVRLLDDSLSIPIVGLFDGDAYGIFIMHLFKYGSMSAAQDGHAMA 68
Query: 83 IPEM 86
P M
Sbjct: 69 CPHM 72
>gi|224061218|ref|XP_002300375.1| predicted protein [Populus trichocarpa]
gi|222847633|gb|EEE85180.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 149 EKGTVNISGKVNPNTMLRILDKNGRHAEFSCLEFHGQVEKNNYVENDHCYYYGDHGYIPP 208
E+GTV + GKVNP T+L + DK G+H E S L F G+V +E +YGD+ Y P
Sbjct: 33 EQGTVKVIGKVNPTTILNVFDKYGKHGEVSSLRFDGEV-----MEQIPYSFYGDNPYNPH 87
Query: 209 RVPVPYSSYPML-----GPEFSYYERYPPFLPPP 237
VP P P+ GPE Y R P +PPP
Sbjct: 88 EVPYPPIPIPIPYHFFRGPEQQLYGRNPYPMPPP 121
>gi|407832805|gb|EKF98601.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDIL 64
AVF RL ++ R C+++T G+P ++ R L L + +P LVD +P G IL
Sbjct: 224 AVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSVPLVALVDYNPSGLSIL 283
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG 90
Y++G+ M +++F+ + +HWLG
Sbjct: 284 QQYKYGAGGM-RESQFVAVHALHWLG 308
>gi|452824698|gb|EME31699.1| DNA topoisomerase [Galdieria sulphuraria]
Length = 364
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 40/173 (23%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
+F RL D++ I+I G GYP I+T+ + + +LRLP LVD +P+G +L
Sbjct: 182 GIFKRLLEDRFVHHLPSILICGLGYPSIATKFLFQRIARELRLPCLGLVDYNPHGLALLQ 241
Query: 66 TYRFGSMQMAYD-------AKFLRIPEMH--WLGAFPSDFEKYGLPKNCRLKLT------ 110
TYR + A D + + +H WLG S + L R LT
Sbjct: 242 TYRSSLAKEASDLDNQLSCSSWRESTPLHIYWLGLHFSQLSQLNLWDKFRKPLTRRDRVL 301
Query: 111 -------------------------VEGVKFEIEAFCACSFSFLSEKYIPSKI 138
++ K E++A + S+LS Y+PS I
Sbjct: 302 LTKLRNQLQTKAGRNLAVLEQELNAMQNGKVELQAIYSLGHSYLSRTYLPSAI 354
>gi|449467631|ref|XP_004151526.1| PREDICTED: uncharacterized protein LOC101203275 [Cucumis sativus]
gi|449530132|ref|XP_004172050.1| PREDICTED: uncharacterized LOC101203275 [Cucumis sativus]
Length = 132
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 146 IDAEKGTVNISGKVNPNTMLRILDKNGRHAEFSCLEFHGQVEKNNYVENDHCYY--YGDH 203
+D++ G+V I G+VNP T L++++K+G+HAE + F G+ D YY +GD
Sbjct: 1 MDSDDGSVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEA-------GDRRYYPSFGDD 53
Query: 204 GYIPPRVPVPYSSYPMLGPEFSYYER-YPPFLPPPPPPLPPLPPRP-PPPRPPPPAVSET 261
PY SY + +++R YP P P P + P+P P P P
Sbjct: 54 ASNHSSYSNPYQSY---NEQSHWFDRCYPNLQRPQPYPWQLMLPQPQPQPVSWPMMWPGW 110
Query: 262 SSAAPQAKAATPSQKSKCCTIM 283
Q + +CCT+M
Sbjct: 111 PQPDNQFLDGNQNNFQRCCTVM 132
>gi|145967222|gb|ABP99003.1| meiotic transesterase [Acanthamoeba castellanii]
Length = 69
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 29 GYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPEMHW 88
G+PD++TR L+ L E+LRLP L D +P G + TYR+GS++ ++ L ++ W
Sbjct: 1 GFPDMATRGLLKRLHEELRLPVVGLFDWNPGGMGVYITYRYGSVKSGLESH-LHTVDIKW 59
Query: 89 LGAFPSDFEK 98
LG D E+
Sbjct: 60 LGLCWDDLER 69
>gi|440463984|gb|ELQ33495.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae Y34]
gi|440484008|gb|ELQ64208.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae P131]
Length = 406
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 27 GRGYPDISTRRFLRLLIEKL-RLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIPE 85
G+GYPD+STR + L E R+P + LVD DP G IL TY++ S + ++ + +
Sbjct: 216 GKGYPDLSTRNLVYCLREARPRIPIYSLVDYDPDGIRILCTYKYSSSALEHERQSA-VSN 274
Query: 86 MHWLGAFPSDFEKYGL-PKNCRLKLTVEGVKFEIEA 120
+ W+G SD +++ L P N L+ V EI +
Sbjct: 275 IQWIGIRLSDIKEHHLRPCNSVLQDAGSPVNTEIHS 310
>gi|345560247|gb|EGX43372.1| hypothetical protein AOL_s00215g108 [Arthrobotrys oligospora ATCC
24927]
Length = 610
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 6 AVFHRLANDQYCTR--NRCIVITGRGYPDISTRRFLRLL-----IEKLRLPTFCLVDCDP 58
A+F LA R R I+I G+GYPDI+TR L + L +CLVD DP
Sbjct: 400 AIFRTLAESGDWKRLPGRPILICGKGYPDIATRELAHYLYLTKSLAGQYLDFYCLVDYDP 459
Query: 59 YGFDILTTYRFGSMQMAYDAKF---LRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVE 112
+G DI T Y+ GS+ F + +P + LG D +Y + + T+E
Sbjct: 460 HGLDIYTMYKNGSLSSRATGMFYEQMAVPALRHLGVKFCDILEYCSVEGSSMSQTIE 516
>gi|253744228|gb|EET00462.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia intestinalis
ATCC 50581]
Length = 348
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYG 60
D +F L ++ R+R +VITG+GYPD +TR + L + R+P L D D +G
Sbjct: 174 DTIFEHLVDNYEAIRDRLGRNFMVITGKGYPDAATRALVSFL-DSCRIPILGLADGDAHG 232
Query: 61 FDILTTYRFGS 71
+IL TY +GS
Sbjct: 233 MNILCTYAYGS 243
>gi|159112720|ref|XP_001706588.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia ATCC
50803]
gi|30578215|gb|AAP35104.1|AF485825_1 Spo11 [Giardia intestinalis]
gi|33667822|gb|AAQ24511.1| Spo11 [Giardia intestinalis]
gi|157434686|gb|EDO78914.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia ATCC
50803]
Length = 368
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 5 DAVFHRLANDQYCTRNRC----IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYG 60
D VF L + ++R +VITG+GYPD +TR + L + R+P F L D D +G
Sbjct: 174 DTVFEHLIDSYEAIKDRLGQSFMVITGKGYPDAATRALVSFL-DSCRIPIFGLADGDAHG 232
Query: 61 FDILTTYRFGS 71
+IL TY +GS
Sbjct: 233 MNILCTYAYGS 243
>gi|145967210|gb|ABP98997.1| meiotic transesterase, partial [Trypanosoma cruzi]
Length = 314
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDIL 64
AVF RL ++ R C+++T G+P ++ R L L + +P LVD +P G IL
Sbjct: 189 AVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSVPLVALVDYNPSGLSIL 248
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG 90
Y++G+ M +++++ + +HWLG
Sbjct: 249 QQYKYGAGGM-RESQYVAVHALHWLG 273
>gi|15790022|ref|NP_279846.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|169235745|ref|YP_001688945.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
gi|13124612|sp|Q9HR32.1|TOP6A_HALSA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|229558493|sp|B0R4D2.1|TOP6A_HALS3 RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|10580448|gb|AAG19326.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|167726811|emb|CAP13597.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
Length = 366
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ G P +TRR + L ++L LP D DP+ + I + +
Sbjct: 206 RLVENGFDDDYNAIVVHLGGQPARATRRLTKRLHDELDLPVTVFTDGDPWSYRIYGSVAY 265
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 266 GSIKSAHLSEYLATPQAQFIGIRPQDIVDYDLPTDPLSDSDVNALESELEDPRFQSDFWT 325
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L ++ K E +A + F+++ Y+P ++
Sbjct: 326 EQIGLQLDIDK-KAEQQALASRGLDFVTDTYLPERL 360
>gi|71416166|ref|XP_810124.1| meiotic recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70874610|gb|EAN88273.1| meiotic recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 437
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDIL 64
AVF RL ++ R C+++T G+P ++ R L L + +P LVD +P G IL
Sbjct: 224 AVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSVPLVALVDYNPSGLSIL 283
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG 90
Y++G+ M +++++ + +HWLG
Sbjct: 284 QQYKYGAGGM-RESQYVAVHALHWLG 308
>gi|389582748|dbj|GAB65485.1| topoisomerase [Plasmodium cynomolgi strain B]
Length = 334
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 22 CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
CI+ITG+G PD STR+ + L+E +L + D DPYGF I +Y+ G + DA F
Sbjct: 185 CILITGKGVPDFSTRKIICELVELFQLECVYVGDYDPYGFRIYLSYKEGC-KTNEDAIF- 242
Query: 82 RIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
+M W+G D + +PK L+L+
Sbjct: 243 ACTDMRWVGMNSQDMDL--IPKEALLELS 269
>gi|50556168|ref|XP_505492.1| YALI0F16335p [Yarrowia lipolytica]
gi|49651362|emb|CAG78301.1| YALI0F16335p [Yarrowia lipolytica CLIB122]
Length = 337
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 23 IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLR 82
++ITG+GYPD T+ F+RL E L P F VD DP+G I TYR+ S F+R
Sbjct: 189 LLITGKGYPDHMTQDFVRLFDEML--PLFICVDADPHGIHIAATYRYRS--------FVR 238
Query: 83 IPEMHWLGAFPS-------DFEKYGLP 102
P + LG+ S DF++ LP
Sbjct: 239 APSLQGLGSSISYIGVSLVDFKRGHLP 265
>gi|407396212|gb|EKF27401.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi
marinkellei]
Length = 455
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDIL 64
AVF RL ++ R C+++T G+P ++ R L L + +P LVD +P G IL
Sbjct: 242 AVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQHVPLVALVDYNPSGLSIL 301
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG 90
Y++G+ M ++++ + +HWLG
Sbjct: 302 QQYKYGAGGM-RESQYAAVHALHWLG 326
>gi|218185894|gb|EEC68321.1| hypothetical protein OsI_36417 [Oryza sativa Indica Group]
Length = 213
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++F+ L N + + CI+ITG G PD++TR + L L + + L D D G I
Sbjct: 55 SIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLSYCLPVKVYILADLDLDGLQIYF 114
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSD 95
TY+ GS A++ + ++ WLGA P D
Sbjct: 115 TYKLGSKVRAFENLCVASRDLIWLGARPED 144
>gi|11498545|ref|NP_069773.1| DNA topoisomerase VI subunit A [Archaeoglobus fulgidus DSM 4304]
gi|3122956|sp|O29322.1|TOP6A_ARCFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2649657|gb|AAB90299.1| DNA topoisomerase VI, subunit A (top6A) [Archaeoglobus fulgidus DSM
4304]
Length = 360
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + I++ +G P STRR LR L +L LP D DP+ + I + +
Sbjct: 200 RLVENGFDEKYDAIIVHLKGQPARSTRRLLRRLNTELNLPVVVFTDGDPWSYRIFASVAY 259
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
GS++ A+ +++L P ++G P+D KY LP + KLT E +K
Sbjct: 260 GSIKSAHLSEYLATPAAQFVGIRPTDIVKYDLPAD---KLTEEDIK 302
>gi|367037763|ref|XP_003649262.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
gi|346996523|gb|AEO62926.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
Length = 418
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 27 GRGYPDISTRRFLRLLIEKLR--LPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRIP 84
+G+PD++TRRFL + +R L LVD DP G I+ TYR+GS ++ ++ + P
Sbjct: 232 AKGFPDLTTRRFL-CALHSIRPDLGISVLVDFDPDGVAIMRTYRYGSKRLGHEEN-VATP 289
Query: 85 EMHWLGAFPSDF 96
++ WLG D
Sbjct: 290 QLRWLGILSDDI 301
>gi|221054093|ref|XP_002261794.1| topoisomerase [Plasmodium knowlesi strain H]
gi|193808254|emb|CAQ38957.1| topoisomerase, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 22 CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
CI+ITG+G PD STR+ + L+E +L + D DPYGF I +Y+ G D
Sbjct: 185 CILITGKGVPDFSTRKIICELVELFQLECVYVGDYDPYGFRIYLSYKEGCKTNEDD--IF 242
Query: 82 RIPEMHWLGAFPSDFE 97
M W+G D E
Sbjct: 243 ACTNMRWIGMNSQDIE 258
>gi|395752486|ref|XP_002830510.2| PREDICTED: meiotic recombination protein SPO11 [Pongo abelii]
Length = 384
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 57/173 (32%)
Query: 5 DAVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFC--LVDCDP---- 58
DA F RL D + CI+IT L +P C ++ D
Sbjct: 226 DATFPRLLYDTLHKLSPCIMIT-------------------LSVPATCPVAINADTAMRS 266
Query: 59 --YGFDILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEG--- 113
+I+ Y++GSM M+++A L +P + WLG PSD ++ +PK+ + LT
Sbjct: 267 TRQSIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMK 326
Query: 114 ---------------------------VKFEIEAFCACSFSFLSEKYIPSKIQ 139
+K EI+A S +LS Y+P+K++
Sbjct: 327 LDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLK 379
>gi|84468370|dbj|BAE71268.1| hypothetical protein [Trifolium pratense]
Length = 478
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
K I KI GV++ IDAE+G V +SG V+PN +++ L K+G+HAE
Sbjct: 28 KKILQKIDGVFTTEIDAEQGKVTVSGNVDPNILIKKLAKSGKHAEL 73
>gi|356555626|ref|XP_003546131.1| PREDICTED: uncharacterized protein LOC100786567 [Glycine max]
Length = 492
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
K I KI GV++ IDAE+G V +SG V+PN +++ L K+G+HAE
Sbjct: 28 KKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAKSGKHAEL 73
>gi|224131002|ref|XP_002328429.1| predicted protein [Populus trichocarpa]
gi|222838144|gb|EEE76509.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 107 LKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLR 166
+K+ +K IE C C K + KI+GVY+ ++AE+G V ++G V+P +++
Sbjct: 7 MKMQTHTLKVNIE--CHCDGCKKKIKKMLQKIEGVYTTTVNAEQGKVIVTGNVDPAKLIK 64
Query: 167 ILDKNGRHAEF 177
L+K+G+HAE
Sbjct: 65 QLEKSGKHAEL 75
>gi|429329748|gb|AFZ81507.1| hypothetical protein BEWA_009190 [Babesia equi]
Length = 175
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 5 DAVFHRLANDQYCTR-NRCIVITGRGYPDISTRRFL---RLLIEKLRLPTFCLVDCDPYG 60
+ +++RL R N C++I RG+PDI+TR L R +KL +P CL D + G
Sbjct: 35 ETIYYRLLQCAILKRHNPCVMILSRGFPDIATRELLYEIRNHSKKLNVPILCLTDFNRAG 94
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWL 89
+I T+ G ++ Y IPE+ WL
Sbjct: 95 LNIALTFYRGPIKTNYYTNECSIPELKWL 123
>gi|356576767|ref|XP_003556501.1| PREDICTED: uncharacterized protein LOC100779743 [Glycine max]
Length = 530
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQGVYSVVIDAEKGTVNISGKVNPN 162
+NC LK+ + C K I KI GVYSV IDAE+G V +SG V+P
Sbjct: 10 QNCLLKVNIH-----------CDGCEQKVKKILQKIDGVYSVNIDAERGKVMVSGHVDPA 58
Query: 163 TMLRILDKNGRHAEF 177
+++ L ++G+HAE
Sbjct: 59 KLIKKLKRSGKHAEL 73
>gi|71403068|ref|XP_804374.1| meiotic recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70867310|gb|EAN82523.1| meiotic recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 437
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLR-LPTFCLVDCDPYGFDIL 64
AVF RL ++ R C+++T G+P ++ R L L + P LVD +P G IL
Sbjct: 224 AVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSAPLVALVDYNPSGLSIL 283
Query: 65 TTYRFGSMQMAYDAKFLRIPEMHWLG 90
Y++G+ M ++++ + +HWLG
Sbjct: 284 QQYKYGAGGM-RESQYAAVHALHWLG 308
>gi|356546434|ref|XP_003541631.1| PREDICTED: uncharacterized protein LOC100811318 [Glycine max]
Length = 503
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
K I KI GV++ IDAE+G V +SG V+PN +++ L K+G+HAE
Sbjct: 28 KKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAKSGKHAEL 73
>gi|356521947|ref|XP_003529611.1| PREDICTED: uncharacterized protein LOC100804757 [Glycine max]
Length = 490
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
K I KI GV++ IDAE+G V +SG V+PN +++ L K+G+HAE
Sbjct: 28 KKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAKSGKHAEL 73
>gi|346318300|gb|EGX87904.1| meiotic recombination protein spo11 [Cordyceps militaris CM01]
Length = 301
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFL-RLLIEKLRLPTFCLVDCDPYG 60
DAVF L ++ + I++T RGYPD+ TR FL ++ E LP L D DP G
Sbjct: 109 DAVFRSLVAVRFWETSLAGSGILVTARGYPDLMTRSFLTKIEAECPHLPMLVLSDFDPDG 168
Query: 61 FDILTTYRFGSMQMAYDAKFLRIPEMHWLG 90
I + YR+G+ ++++ +RI WLG
Sbjct: 169 LSIFSCYRYGTTNFSHESSNVRI-NFGWLG 197
>gi|156082001|ref|XP_001608493.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801064|gb|EDL42469.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 334
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 22 CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 81
CI+ITG+G PD STR+ + L+E +L + D DPYGF I +Y+ G + DA F
Sbjct: 185 CILITGKGVPDFSTRKIICELVELFQLECVYVGDYDPYGFRIYLSYKEGC-KTNEDAIF- 242
Query: 82 RIPEMHWLGAFPSDFEKYGLPKNCRLKLT 110
+M W+G D +PK L L+
Sbjct: 243 PCADMRWVGMNSQDMSL--IPKEALLALS 269
>gi|356535103|ref|XP_003536088.1| PREDICTED: uncharacterized protein LOC100809272 [Glycine max]
Length = 560
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
K I KI GVYSV IDAE+G V +SG V+P +L+ L ++G+HAE
Sbjct: 28 KKILQKIDGVYSVNIDAERGKVMVSGHVDPAKLLKKLKRSGKHAEL 73
>gi|145910313|gb|ABP98812.1| SPO11 meiotic recombination protein [Oryzias latipes]
Length = 84
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 35/113 (30%)
Query: 28 RGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRFGS-MQMAYDAKFLRIPEM 86
+G PD+++R ++ L + L++P F LVD DP+GF+I+ Y++GS M++ +K
Sbjct: 1 KGVPDVNSRLMVKKLWDTLQIPIFALVDADPHGFEIMCIYKYGSVMELMQQSK------- 53
Query: 87 HWLGAFPSDFEKYGLPKNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKIQ 139
VK EI++ + FL+ Y+P+K++
Sbjct: 54 ---------------------------VKAEIQSLADIAPDFLTSIYLPNKLR 79
>gi|290979667|ref|XP_002672555.1| predicted protein [Naegleria gruberi]
gi|284086132|gb|EFC39811.1| predicted protein [Naegleria gruberi]
Length = 374
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 5 DAVFHRLANDQY--CTRNRCIVITGRGYPDISTRRFLRLLIEKL---RLPTFCLVDCDPY 59
DA+F RL D+ RN C++ITG GYP I TR ++ + + RL C D + +
Sbjct: 236 DAIFRRLVEDKIFKLVRN-CLLITGCGYPSIVTRYVVKHVSTRFPNARLYALC--DFNIF 292
Query: 60 GFDILTTYRFGSMQMA---YDAKFLRIPEMHWLGAFPSD 95
G+ I++TY++GS++M+ + + WLG D
Sbjct: 293 GYQIMSTYKYGSVEMSRHKVQQESALKDRLQWLGMNYED 331
>gi|145508327|ref|XP_001440113.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834166|emb|CAI44467.1| Spo11-like type II topoisomerase [Paramecium tetraurelia]
gi|124407319|emb|CAK72716.1| unnamed protein product [Paramecium tetraurelia]
Length = 330
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 5 DAVFHRLANDQYCT-RNRCIVITGRGYPDISTRRFLRLL-IEKLRLPTFCLVDCDPYGFD 62
+ V+ L N+ + ++ITG+GYP +T+ F++ L I +P + D DP+G+D
Sbjct: 171 ETVYFHLINEMHQEFLQNTVLITGKGYPCYATKSFVKYLSIMNPYIPVYYFGDMDPHGYD 230
Query: 63 ILTTYRFGSMQMAYDAKFL-RIPEMHWLGA-FPSD 95
IL Y FG+ AY + L IP + WL + FP D
Sbjct: 231 ILQQYAFGN---AYTSHELNNIPWIQWLNSYFPLD 262
>gi|387595727|gb|EIJ93350.1| hypothetical protein NEPG_01692 [Nematocida parisii ERTm1]
Length = 305
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF 61
+A+F+ + + N+ ++ITG+GYP +T FL +L +R+ + L DCDP+G
Sbjct: 154 EAIFNDIIQEIENIENKVGKVLIITGKGYPCTNTLMFLGVL-SSVRI--YGLFDCDPHGL 210
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
I + Y++GS + + L+IP M +G D
Sbjct: 211 SIYSVYKYGSKKRPH----LKIPNMQRIGVHLQDI 241
>gi|387594072|gb|EIJ89096.1| hypothetical protein NEQG_00915 [Nematocida parisii ERTm3]
Length = 305
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 5 DAVFHRLANDQYCTRNRC---IVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF 61
+A+F+ + + N+ ++ITG+GYP +T FL +L +R+ + L DCDP+G
Sbjct: 154 EAIFNDIIQEIENIENKVGKVLIITGKGYPCTNTLMFLGVL-SSVRI--YGLFDCDPHGL 210
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLGAFPSDF 96
I + Y++GS + + L+IP M +G D
Sbjct: 211 SIYSVYKYGSKKRPH----LKIPNMQRIGVHLQDI 241
>gi|449436006|ref|XP_004135785.1| PREDICTED: uncharacterized protein LOC101209838 [Cucumis sativus]
Length = 554
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 35/46 (76%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
+ I KI+GVY+V ID+E+G V ++G ++P +++ L+K+G+HAE
Sbjct: 28 RKILQKIEGVYTVKIDSEQGKVTVTGNIDPGKLIKKLEKSGKHAEL 73
>gi|284162141|ref|YP_003400764.1| DNA topoisomerase [Archaeoglobus profundus DSM 5631]
gi|284012138|gb|ADB58091.1| DNA topoisomerase (ATP-hydrolyzing) [Archaeoglobus profundus DSM
5631]
Length = 357
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + I++ +G P STRR LR L +L LP D DP+ + I + +
Sbjct: 195 RLVENGFDEDYNAIIVHLKGQPARSTRRLLRRLNTELGLPVVVFTDGDPWSYRIYASVAY 254
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNC------------------------ 105
GS++ A+ +++L P ++G PSD KY LP +
Sbjct: 255 GSIKSAHLSEYLATPSAMFVGIRPSDILKYKLPSDKLTDEDIKALNAILSDPRFDSDFWR 314
Query: 106 -RLKLTVE-GVKFEIEAFCACSFSFLSEKYIPSKI 138
+KL +E G K E +A SF+++ Y+P ++
Sbjct: 315 REIKLQLELGRKSEQQALAKYGLSFVTDVYLPERL 349
>gi|356563547|ref|XP_003550023.1| PREDICTED: uncharacterized protein LOC100777182 [Glycine max]
Length = 499
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 109 LTVEGVKFEIEAFC-ACSFSFLSEKYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRI 167
L ++ ++ C C K I KI GV++ IDAE+G V +SG V+PN +++
Sbjct: 7 LKIQKCVLKVNIHCDGCKHKV---KKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKK 63
Query: 168 LDKNGRHAEF 177
L K+G+HA+
Sbjct: 64 LTKSGKHAKL 73
>gi|449485721|ref|XP_004157256.1| PREDICTED: uncharacterized LOC101209838 [Cucumis sativus]
Length = 574
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 35/46 (76%)
Query: 132 KYIPSKIQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEF 177
+ I KI+GVY+V ID+E+G V ++G ++P +++ L+K+G+HAE
Sbjct: 28 RKILQKIEGVYTVKIDSEQGKVTVTGNIDPGKLIKKLEKSGKHAEL 73
>gi|224081507|ref|XP_002306439.1| predicted protein [Populus trichocarpa]
gi|222855888|gb|EEE93435.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 18/94 (19%)
Query: 138 IQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEFSCLEFHGQVEKNNYVENDHC 197
IQGV S IDA +G +SG+VNPN +L IL K G+HAE + HG + N +
Sbjct: 48 IQGV-SFTIDASRGRARVSGEVNPNKLLLILAKAGKHAELIWVH-HGNSQSN---AQSYS 102
Query: 198 YYYGDHGYIPPRVPVPYSSYPMLGPEFSYYERYP 231
+ YG+ +P+ Y G + +Y YP
Sbjct: 103 HVYGN-------IPMGY------GDGYGFYSDYP 123
>gi|327401250|ref|YP_004342089.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
gi|327316758|gb|AEA47374.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
Length = 380
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + + I++ +G P STRR LR L +L LP D DP+ + I + +
Sbjct: 220 RLVENGFDEKFDAIIVHLKGQPARSTRRLLRRLNTELGLPVVVFTDGDPWSYRIYASVAY 279
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLPKNCRLKLTVEGVK 115
GS++ A+ +++L P ++G PSD KY LP + KLT + +K
Sbjct: 280 GSIKSAHLSEYLATPAAKFVGIRPSDIVKYELPSD---KLTDQDIK 322
>gi|159464146|ref|XP_001690303.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158284291|gb|EDP10041.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 1873
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 22 CIVITGRGYPDISTRRFL-RLLIEKLRLPTFCLVDCDPYGFDILTTYRFGSMQMAYDAKF 80
C+++T +G PDI+TR F RL + LVD +P G IL TY++GS +M + +
Sbjct: 956 CVLVTAKGVPDIATRAFAARLAATFPGMQPVGLVDFNPAGVVILATYKYGSDRMGPEGRA 1015
Query: 81 LRIPEMHWLG 90
+P + WLG
Sbjct: 1016 HPLPRLRWLG 1025
>gi|452207167|ref|YP_007487289.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
gi|452083267|emb|CCQ36553.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
Length = 370
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 10 RLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILTTYRF 69
RL + + IV+ +G P +TRR R L +L LPT D DP+ + I + +
Sbjct: 210 RLVENGFDEAYNVIVVHLKGQPARATRRITRRLDAELDLPTVVFCDGDPWSYRIYASVAY 269
Query: 70 GSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP--------------------------- 102
GS++ A+ +++L P+ ++G P D Y LP
Sbjct: 270 GSIKSAHLSEYLATPDAEYVGIQPVDIVNYELPTDPLSDSDVNALESELEDPRFQDDYWT 329
Query: 103 KNCRLKLTVEGVKFEIEAFCACSFSFLSEKYIPSKI 138
+ L+L + G K E +A + F+++ Y+P ++
Sbjct: 330 EQIELQLDI-GKKAEQQALASRGLDFVTDTYLPERL 364
>gi|378755995|gb|EHY66020.1| hypothetical protein NERG_00716 [Nematocida sp. 1 ERTm2]
Length = 313
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 23/117 (19%)
Query: 5 DAVFHRLANDQYCTRNR---CIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGF 61
+AVF+ + D +NR I++TG+GYP +T +FL + +R+ F L DCDP+G
Sbjct: 161 EAVFNDIIQDT-AYKNRMEEIIIVTGKGYPCTNTLKFLSIA-RSIRI--FGLFDCDPHGL 216
Query: 62 DILTTYRFGSMQMAYDAKFLRIPEMHWLG------------AFPSDFEKYGLPKNCR 106
I Y++GS + + L++P M +G + +D ++ L +N R
Sbjct: 217 SIYAVYKYGSKRNPH----LKVPSMERIGIHLYEIPVTPETMYITDKKQISLIRNLR 269
>gi|20093950|ref|NP_613797.1| DNA topoisomerase VI subunit A [Methanopyrus kandleri AV19]
gi|19886903|gb|AAM01727.1| DNA topoisomerase VI, subunit A [Methanopyrus kandleri AV19]
Length = 346
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 6 AVFHRLANDQYCTRNRCIVITGRGYPDISTRRFLRLLIEKLRLPTFCLVDCDPYGFDILT 65
++ RL ++ + +++ +G +TRR LR L E+L LP + D DPYG+ I
Sbjct: 184 GMYRRLVQERAHEKLNALIVGLKGQAARATRRLLRRLNEELGLPVYVFTDGDPYGWHIYM 243
Query: 66 TYRFGSMQMAYDAKFLRIPEMHWLGAFPSDFEKYGLP----KNCRLKLTVE--------- 112
R GS + A+ + L P+ ++G +D +Y LP K K E
Sbjct: 244 VIRSGSAKAAHLNEELACPDAKFIGVTATDIVEYDLPTEPLKKTDYKRIEELRRDPRYYD 303
Query: 113 -------------GVKFEIEAFCACSFSFLSEKYIPSKI 138
G K E +AF S ++ ++Y+P+K+
Sbjct: 304 PFWKKELDLLEKLGKKAEQQAFAKYSLDYVVKEYLPAKL 342
>gi|15231158|ref|NP_187921.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana]
gi|10172601|dbj|BAB01405.1| unnamed protein product [Arabidopsis thaliana]
gi|67633630|gb|AAY78739.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana]
gi|332641780|gb|AEE75301.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana]
Length = 183
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 138 IQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEFSCLEFHGQV 186
+ GVYSV + ++ + +VNPN +L + ++ G H + + L F G+V
Sbjct: 31 VYGVYSVDFTGDDNSMKLKARVNPNVLLAVAERYGEHGKITNLRFDGEV 79
>gi|297834128|ref|XP_002884946.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330786|gb|EFH61205.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 183
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 138 IQGVYSVVIDAEKGTVNISGKVNPNTMLRILDKNGRHAEFSCLEFHGQV 186
+ GVYSV ++ ++ + VNPN +L ++++ G H + + L F G+V
Sbjct: 31 VNGVYSVDFVSDDNSMKLKASVNPNILLAVIERYGEHGKITNLRFEGEV 79
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.142 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,393,573,237
Number of Sequences: 23463169
Number of extensions: 281957695
Number of successful extensions: 6089016
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18618
Number of HSP's successfully gapped in prelim test: 17553
Number of HSP's that attempted gapping in prelim test: 4560210
Number of HSP's gapped (non-prelim): 718971
length of query: 283
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 142
effective length of database: 9,050,888,538
effective search space: 1285226172396
effective search space used: 1285226172396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)