Query         038386
Match_columns 523
No_of_seqs    187 out of 1823
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 10:28:18 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038386.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038386hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 4.2E-86 9.1E-91  635.2  45.2  459   36-522    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 6.7E-80 1.5E-84  582.2  42.4  452   37-522    31-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.5E-79 3.3E-84  614.6  45.8  467   34-521    54-533 (543)
  4 PLN00168 Cytochrome P450; Prov 100.0   2E-78 4.3E-83  605.2  47.8  474   35-522    33-517 (519)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 1.1E-77 2.5E-82  599.5  45.3  491   10-522     6-509 (517)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 2.1E-77 4.6E-82  593.6  44.0  485   11-522     9-497 (504)
  7 PLN03234 cytochrome P450 83B1; 100.0 5.1E-77 1.1E-81  594.4  44.5  465   34-521    25-498 (499)
  8 PLN03112 cytochrome P450 famil 100.0 1.5E-76 3.2E-81  592.7  47.4  492   12-522     7-508 (514)
  9 PLN02183 ferulate 5-hydroxylas 100.0 3.1E-76 6.7E-81  589.0  43.9  460   36-521    35-511 (516)
 10 PLN02394 trans-cinnamate 4-mon 100.0 8.6E-76 1.9E-80  586.2  45.6  469   32-522    25-502 (503)
 11 PLN02966 cytochrome P450 83A1  100.0 1.7E-75 3.6E-80  582.3  44.9  462   34-520    26-498 (502)
 12 PTZ00404 cytochrome P450; Prov 100.0 1.9E-75 4.1E-80  580.5  43.9  449   34-521    26-482 (482)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 2.8E-76 6.1E-81  580.2  36.0  457   35-523    33-497 (497)
 14 KOG0159 Cytochrome P450 CYP11/ 100.0 1.1E-75 2.4E-80  539.7  35.0  460   36-523    49-519 (519)
 15 PLN02655 ent-kaurene oxidase   100.0 4.4E-75 9.6E-80  573.8  41.8  455   39-523     1-465 (466)
 16 PLN02500 cytochrome P450 90B1  100.0 5.5E-75 1.2E-79  577.4  40.6  480    1-520     1-488 (490)
 17 PLN02290 cytokinin trans-hydro 100.0 1.3E-74 2.8E-79  579.1  40.3  456   36-522    41-515 (516)
 18 PLN03018 homomethionine N-hydr 100.0 6.3E-73 1.4E-77  562.2  47.8  470   36-522    39-524 (534)
 19 PLN02169 fatty acid (omega-1)- 100.0 3.5E-73 7.5E-78  562.3  38.5  450   39-521    33-499 (500)
 20 PF00067 p450:  Cytochrome P450 100.0 4.6E-73   1E-77  566.3  30.9  455   39-518     1-463 (463)
 21 PLN02774 brassinosteroid-6-oxi 100.0 9.2E-72   2E-76  549.7  35.7  432   34-520    28-462 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 3.8E-71 8.3E-76  553.4  39.1  453   39-522    32-516 (516)
 23 PLN02738 carotene beta-ring hy 100.0 1.4E-70 3.1E-75  550.8  41.8  437   57-523   149-596 (633)
 24 PLN02302 ent-kaurenoic acid ox 100.0 1.7E-70 3.7E-75  548.0  40.8  446   31-523    36-489 (490)
 25 PLN02196 abscisic acid 8'-hydr 100.0 7.2E-71 1.6E-75  542.8  37.5  434   29-521    27-462 (463)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 1.4E-70   3E-75  540.2  36.8  441   34-523     4-451 (452)
 27 PLN02936 epsilon-ring hydroxyl 100.0   9E-69 1.9E-73  531.1  38.9  455   39-522    14-482 (489)
 28 PLN02987 Cytochrome P450, fami 100.0 1.9E-68 4.1E-73  523.4  39.3  439   34-522    27-469 (472)
 29 KOG0684 Cytochrome P450 [Secon 100.0 9.9E-69 2.1E-73  480.9  31.1  447   37-522    31-485 (486)
 30 PLN02426 cytochrome P450, fami 100.0 1.2E-66 2.6E-71  514.6  39.8  438   45-522    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 3.3E-60 7.2E-65  461.1  30.3  420   35-502    15-468 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0   2E-53 4.4E-58  409.2  29.6  383   61-521    24-410 (411)
 33 PF12273 RCR:  Chitin synthesis  70.8       4 8.8E-05   32.3   2.7   24    9-32      4-27  (130)
 34 KOG3653 Transforming growth fa  58.7      30 0.00066   33.7   6.3   39   69-107   220-258 (534)
 35 TIGR00847 ccoS cytochrome oxid  58.5      19 0.00042   22.8   3.4   28    1-29      1-28  (51)
 36 PF15102 TMEM154:  TMEM154 prot  53.8      13 0.00027   29.7   2.5    7    5-11     59-65  (146)
 37 cd05024 S-100A10 S-100A10: A s  52.2      71  0.0015   23.3   6.0   39  283-321    45-83  (91)
 38 COG3197 FixS Uncharacterized p  51.8      26 0.00057   22.7   3.2   23    1-24      1-23  (58)
 39 PF05952 ComX:  Bacillus compet  50.6      16 0.00035   23.8   2.2   18  330-347     5-22  (57)
 40 KOG0114 Predicted RNA-binding   49.7   1E+02  0.0022   23.1   6.3   58   36-98     11-74  (124)
 41 PF12554 MOZART1:  Mitotic-spin  49.0      50  0.0011   20.7   4.1   42  307-348     6-47  (48)
 42 PRK06789 flagellar motor switc  45.9      25 0.00054   24.5   2.7   41  373-414    21-63  (74)
 43 PF12508 DUF3714:  Protein of u  44.8      18  0.0004   30.9   2.4   44  366-412    51-94  (200)
 44 TIGR03779 Bac_Flav_CT_M Bacter  41.0       6 0.00013   37.8  -1.1   44  366-412   254-297 (410)
 45 PF15330 SIT:  SHP2-interacting  40.3      64  0.0014   24.4   4.4   11   44-54     45-55  (107)
 46 KOG3506 40S ribosomal protein   39.9      13 0.00029   23.6   0.6   11  459-469    12-22  (56)
 47 COG4459 NapE Periplasmic nitra  38.5      35 0.00076   21.9   2.3    6   39-44     56-61  (62)
 48 PF13893 RRM_5:  RNA recognitio  34.7      99  0.0021   19.7   4.3   35   65-99      1-39  (56)
 49 PF03597 CcoS:  Cytochrome oxid  33.8      84  0.0018   19.4   3.4   24    6-29      4-27  (45)
 50 PF14129 DUF4296:  Domain of un  33.4 1.8E+02   0.004   20.9   6.6   51  303-353    29-79  (87)
 51 PF06667 PspB:  Phage shock pro  32.9      71  0.0015   22.3   3.3   20    5-24      4-23  (75)
 52 PF15183 MRAP:  Melanocortin-2   31.2 1.5E+02  0.0032   21.1   4.5   20    7-26     40-59  (90)
 53 PF15300 INT_SG_DDX_CT_C:  INTS  30.3      28  0.0006   23.5   1.0   14  368-381    41-54  (65)
 54 PF08776 VASP_tetra:  VASP tetr  29.5 1.2E+02  0.0026   18.1   3.3   28  338-379    10-37  (40)
 55 PF14550 Peptidase_U35_2:  Puta  29.4      35 0.00076   26.5   1.6   22  391-412    71-92  (122)
 56 COG0851 MinE Septum formation   29.3 1.5E+02  0.0033   21.4   4.5   18  338-355    36-53  (88)
 57 COG1759 5-formaminoimidazole-4  28.6      95  0.0021   28.7   4.3   71  371-483   276-352 (361)
 58 PF14483 Cut8_M:  Cut8 dimerisa  28.0      95  0.0021   18.3   2.8   19  328-346    16-35  (38)
 59 PF09201 SRX:  SRX;  InterPro:   27.5      51  0.0011   26.0   2.1   23  466-488    18-40  (148)
 60 PF11227 DUF3025:  Protein of u  27.4      38 0.00082   29.1   1.6   20  415-434   192-211 (212)
 61 PF06024 DUF912:  Nucleopolyhed  27.4      48   0.001   24.8   2.0   13   16-28     74-86  (101)
 62 PF05961 Chordopox_A13L:  Chord  25.4 1.8E+02  0.0039   19.7   4.0   14   11-24      8-21  (68)
 63 PRK00400 hisE phosphoribosyl-A  25.2 3.1E+02  0.0066   20.8   6.7   64  283-351    20-91  (105)
 64 cd05023 S-100A11 S-100A11: S-1  25.2 2.7E+02  0.0059   20.2   5.6   37  285-321    51-87  (89)
 65 PF12273 RCR:  Chitin synthesis  24.7      29 0.00063   27.4   0.4   15   15-29      7-21  (130)
 66 PRK13991 cell division topolog  24.1 2.3E+02  0.0051   20.5   4.8   19  337-355    35-53  (87)
 67 PF13625 Helicase_C_3:  Helicas  24.1   2E+02  0.0044   22.5   5.1   38   60-99     75-112 (129)
 68 PRK09458 pspB phage shock prot  24.0 1.6E+02  0.0034   20.6   3.7   20    5-24      4-23  (75)
 69 PRK05933 type III secretion sy  23.4      71  0.0015   29.4   2.6   45  369-414   316-363 (372)
 70 PHA03049 IMV membrane protein;  22.9 1.9E+02  0.0041   19.5   3.7   12   36-47     30-41  (68)
 71 PF10272 Tmpp129:  Putative tra  22.5 1.7E+02  0.0038   27.8   5.0   47   45-91    109-157 (358)
 72 PRK11875 psbT photosystem II r  21.7   1E+02  0.0023   17.0   2.0    6    1-6       1-6   (31)
 73 PLN03134 glycine-rich RNA-bind  21.6 3.5E+02  0.0076   21.8   6.1   50   46-100    37-95  (144)
 74 CHL00031 psbT photosystem II p  20.7      86  0.0019   17.7   1.6    7    1-7       1-7   (33)
 75 PF13993 YccJ:  YccJ-like prote  20.7 1.2E+02  0.0026   19.9   2.5   31  317-347     8-39  (69)
 76 cd05026 S-100Z S-100Z: S-100Z   20.6 3.1E+02  0.0067   20.0   5.2   37  285-321    52-88  (93)
 77 PF12444 Sox_N:  Sox developmen  20.6      67  0.0015   23.0   1.5   20  476-495    60-79  (84)
 78 PF11138 DUF2911:  Protein of u  20.5      80  0.0017   25.5   2.1   39  394-433    53-98  (145)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.2e-86  Score=635.22  Aligned_cols=459  Identities=33%  Similarity=0.593  Sum_probs=400.8

Q ss_pred             CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 038386           36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA  115 (523)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  115 (523)
                      .++||||+++|++||++++..  ..++..+++|.++||++|++|+|+.++|||+|++.++|++++++..|+.||......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~--~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGS--LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            789999999999999999843  259999999999999999999999999999999999999999999999999832222


Q ss_pred             ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386          116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA  195 (523)
Q Consensus       116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~  195 (523)
                        ..++.++.+++++++|+.|+.+||+..  ..+++...++ .......++++.+++.+.+ ..  .+++||+.+.+..+
T Consensus       103 --~~~~~~~~~i~~a~yG~~Wr~~Rr~~~--~~L~~~~~~~-~~~~~R~~E~~~l~~~l~~-~~--~~~~vdl~~~l~~~  174 (489)
T KOG0156|consen  103 --KYLSYGGKGIVFAPYGDYWREMRRFAL--TELRSFGRGK-SFMEIREEEVDELVKKLSK-SK--KGEPVDLSELLDLL  174 (489)
T ss_pred             --HHhcCCCCceEeCCCcHHHHHHHHHHH--HHhcChhhhh-hhHHHHHHHHHHHHHHHHh-cC--CCceeeHHHHHHHH
Confidence              445556679999999999999999998  8899999999 8888889999999999988 22  23899999999999


Q ss_pred             HHHHhhhhhccCCcch---hHHHHHHHHHHHHHHHHhhhhHHhhcc-ccchhh-hHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386          196 IFYLLVKMCFGNNVEE---QEIRELGCAQKKLFMIINKLKVFAIMP-DLGKIL-FRKRWKKFLGIIRSREDVFVGLVRDR  270 (523)
Q Consensus       196 ~~~v~~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  270 (523)
                      +.+++++++||.+++.   +...++..++.+.....+.+.+.+++| ++.... ..+..++......++..+++++|+++
T Consensus       175 ~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh  254 (489)
T KOG0156|consen  175 VGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEH  254 (489)
T ss_pred             HHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999953   455568889999888888888999999 454433 22445566667777999999999999


Q ss_pred             HHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHH
Q 038386          271 KKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEING  350 (523)
Q Consensus       271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  350 (523)
                      ++.. ..  +  +..|+++.+++...+++...+|++++...+.++++||+|||++++.|++.+|++||++|+|+++||++
T Consensus       255 ~~~~-~~--~--~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~  329 (489)
T KOG0156|consen  255 REKI-GD--E--EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDE  329 (489)
T ss_pred             Hhhh-cc--C--CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            8876 22  1  23899999999986543334999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCC
Q 038386          351 VVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEF  430 (523)
Q Consensus       351 ~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  430 (523)
                      +++.+ +.++.+|+.++|||+|||+|++|+||++|.. ++|.+++|+.++||.|||||.|+++.|++||||++|+||++|
T Consensus       330 vvG~~-r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~-~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF  407 (489)
T KOG0156|consen  330 VVGKG-RLVSESDLPKLPYLKAVIKETLRLHPPLPLL-LPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEF  407 (489)
T ss_pred             HhCCC-CCCChhhhccCHHHHHHHHHHHhcCCCcccc-ccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCcccc
Confidence            99986 4499999999999999999999999999999 999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEee
Q 038386          431 KPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEM  510 (523)
Q Consensus       431 ~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  510 (523)
                      +||||++.+  +..       . ....++|||.|+|.|||..+|++++.++++.|+++|+|++.++.++..+. +.++..
T Consensus       408 ~PERFl~~~--d~~-------~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~  476 (489)
T KOG0156|consen  408 KPERFLDSN--DGK-------G-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKK  476 (489)
T ss_pred             ChhhhcCCc--ccc-------C-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc-ccceec
Confidence            999999984  111       1 24789999999999999999999999999999999999988654455555 377788


Q ss_pred             cCceeEEEeecC
Q 038386          511 KNPLHARISPRV  522 (523)
Q Consensus       511 ~~~~~~~~~~r~  522 (523)
                      +.++.+...+|.
T Consensus       477 ~~pl~~~~~~r~  488 (489)
T KOG0156|consen  477 KKPLKAVPVPRL  488 (489)
T ss_pred             CCcceeeeecCC
Confidence            889999888875


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.7e-80  Score=582.24  Aligned_cols=452  Identities=23%  Similarity=0.404  Sum_probs=358.0

Q ss_pred             CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCC--CCCcc
Q 038386           37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRP--KSTSI  114 (523)
Q Consensus        37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~--~~~~~  114 (523)
                      +.+|||+++|++||+..+...... ..+......+||+++++..+.+|.++|+|||.||+|++++.+.|.+|.  ....-
T Consensus        31 rGi~~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~  109 (499)
T KOG0158|consen   31 RGIPGPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP  109 (499)
T ss_pred             CCCCCCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence            469999999999999988653333 566666666669999999999999999999999999999999999954  33221


Q ss_pred             cccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386          115 ADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY  194 (523)
Q Consensus       115 ~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~  194 (523)
                      .  .-++  ..+++ ...|++||++|..++   |.|+..+++ .+.+.+++.+.++++.+.+...  .+..+++.+.+..
T Consensus       110 ~--~~l~--~~~Lf-~~~g~~WK~lR~~ls---P~Fts~kmk-~m~~t~~~~~~~l~~~l~~~~~--~~~~~~~~dl~~~  178 (499)
T KOG0158|consen  110 E--DPLS--ALNLF-FLRGERWKRLRTKLS---PTFTSGKLK-KMFPTMEEVGDELVRHLRRKSE--GGQEGEIKDLCAR  178 (499)
T ss_pred             C--Cccc--ccCch-hccCchHHHHHHhhc---cccchhhHH-HHHHHHHHHHHHHHHHHHHhhc--ccCCccHHHHHHH
Confidence            1  1111  12343 448999999999999   999999999 9999999999999999998654  2357899999999


Q ss_pred             HHHHHhhhhhccCCcch--hHHHHHHHHHHHHHHH-Hhh----hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHH
Q 038386          195 AIFYLLVKMCFGNNVEE--QEIRELGCAQKKLFMI-INK----LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLV  267 (523)
Q Consensus       195 ~~~~v~~~~~fG~~~~~--~~~~~~~~~~~~~~~~-~~~----~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  267 (523)
                      ++.|||++++||.+.+.  +....+.......... ...    ......+|.+...      .+.........+++.+++
T Consensus       179 yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~------l~~~~~~~~~~~~~~~~v  252 (499)
T KOG0158|consen  179 YTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP------LRVKLFPEDVTDFFRKLV  252 (499)
T ss_pred             HHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh------hhcccChHHHHHHHHHHH
Confidence            99999999999998742  1112233222222222 111    1112223333221      122334445555666666


Q ss_pred             HHHHHHHhhhhhccCCccchHHHHHHhhCCC----CCC-CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHH
Q 038386          268 RDRKKIKQENEERDIDSESYVDTLIELRLPS----DRK-VLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQA  342 (523)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  342 (523)
                      .++.+..+..   ...+.|+++.++++..++    +.. .+|.+|++++++.+++||.||||++++.++|+||+||++|+
T Consensus       253 ~~~v~~R~~~---~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~  329 (499)
T KOG0158|consen  253 NSRVEQREKE---NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQD  329 (499)
T ss_pred             HHHHHHHHhc---CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHH
Confidence            6655554222   137789999999998531    112 59999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeC-CEEeCCCCEEeeccccccCCC
Q 038386          343 KILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELG-GYLVTKGISVNFLVADMGRDP  421 (523)
Q Consensus       343 ~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~  421 (523)
                      |||+||++++.+... ++++.+.+|+||++||+||||+||+++..  .|.+++|++++ |+.||||+.|.++.+++||||
T Consensus       330 kLreEI~~~~~~~~~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~--~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp  406 (499)
T KOG0158|consen  330 KLREEIDEVLEEKEG-LTYDSLSKLKYLDMVIKETLRLYPPAPFL--NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDP  406 (499)
T ss_pred             HHHHHHHHHhcccCC-CCHHHHhCCcHHHHHHHHHHhhCCCcccc--cceecCceecCCCeEeCCCCEEEeecccccCCc
Confidence            999999999777533 99999999999999999999999999987  99999999999 999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCc-
Q 038386          422 NVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDL-  500 (523)
Q Consensus       422 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~-  500 (523)
                      ++||||++|+||||++.+.+          ..++..|+|||.|||.|+|++||.+|+|++|++||++|+|+..+..... 
T Consensus       407 ~~~p~Pe~F~PERF~~~~~~----------~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~  476 (499)
T KOG0158|consen  407 EYWPEPEKFKPERFEEENNK----------SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPL  476 (499)
T ss_pred             ccCCCcccCCCccCCCCccc----------ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcc
Confidence            99999999999999987421          2246899999999999999999999999999999999999998822222 


Q ss_pred             -ccccceEEeecCceeEEEeecC
Q 038386          501 -SEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       501 -~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                       ....++++.|++++++++.+|+
T Consensus       477 ~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  477 EGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCCccceeeecCCceEEEEEeCC
Confidence             1223778999999999999985


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.5e-79  Score=614.55  Aligned_cols=467  Identities=23%  Similarity=0.357  Sum_probs=369.3

Q ss_pred             CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST  112 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~  112 (523)
                      ++.+.||||+++|++||++++.. ....+.++.+|+++|| ++|++++|+.++|+|+||+.+++++.+++..|.+|+...
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~-~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLK-NRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhcc-CCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            44578999999999999988743 1234678999999999 799999999999999999999999999999999998643


Q ss_pred             cccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH
Q 038386          113 SIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF  192 (523)
Q Consensus       113 ~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~  192 (523)
                      . .  ..++.+..++++..+|+.|+++|++++  ++.+++...+ .+.+.++++++.+++.+.+...  +++++|+.+.+
T Consensus       133 ~-~--~~l~~~~~~~l~~~~G~~Wk~~Rk~l~--~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~  204 (543)
T PLN02971        133 A-Q--KILSNGYKTCVITPFGEQFKKMRKVIM--TEIVCPARHR-WLHDNRAEETDHLTAWLYNMVK--NSEPVDLRFVT  204 (543)
T ss_pred             c-h--hhccCCCCceEecCCcHHHHHHHHHHH--HHhccHHHHH-HHHHHHHHHHHHHHHHHHHhcc--CCCceehHHHH
Confidence            2 2  445543334566678999999999997  4666666677 7888889999999888876543  35689999999


Q ss_pred             HHHHHHHhhhhhccCCcch-------hHHHHHHHHHHHHHHHHhh---hhHHhhccccchhhhHHHHHHHHHhHHhHHHH
Q 038386          193 RYAIFYLLVKMCFGNNVEE-------QEIRELGCAQKKLFMIINK---LKVFAIMPDLGKILFRKRWKKFLGIIRSREDV  262 (523)
Q Consensus       193 ~~~~~~v~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  262 (523)
                      +.++++++++++||.++.+       +...........++.....   ..+.+++|++.++......+...+..+.+.++
T Consensus       205 ~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  284 (543)
T PLN02971        205 RHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKY  284 (543)
T ss_pred             HHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHH
Confidence            9999999999999987621       1111222223333322111   23445677665432112234455567778888


Q ss_pred             HHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHH
Q 038386          263 FVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQA  342 (523)
Q Consensus       263 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  342 (523)
                      +.++|+++++..+.+..  ....|+++.|++...++....++++++++++.++++||+|||+++++|++++|+.||++|+
T Consensus       285 ~~~~i~~~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~  362 (543)
T PLN02971        285 HDPIIDERIKMWREGKR--TQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILH  362 (543)
T ss_pred             HHHHHHHHHHHHhccCC--CCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHH
Confidence            89999887765422211  1346999999986532122359999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCC
Q 038386          343 KILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPN  422 (523)
Q Consensus       343 ~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~  422 (523)
                      |+|+||+++++.+ ..++.+++++||||+|||+|+||++|++|.. ++|.+.+|+.++||.|||||.|+++.|++||||+
T Consensus       363 kl~~EI~~v~g~~-~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~-~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~  440 (543)
T PLN02971        363 KAMEEIDRVVGKE-RFVQESDIPKLNYVKAIIREAFRLHPVAAFN-LPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPK  440 (543)
T ss_pred             HHHHHHHHHhCCC-CCCCHHHhccCHHHHHHHHHHHhcCCCcccC-cceecCCCeeECCEEECCCCEEEECcHHhcCChh
Confidence            9999999999764 7789999999999999999999999999986 7999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC--CCCCc
Q 038386          423 VWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD--EDVDL  500 (523)
Q Consensus       423 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~--~~~~~  500 (523)
                      +|+||++|+||||++.+.+.      . ....+..|+|||.|+|.|+|++||++|+++++++||++|+|++.+  ...+.
T Consensus       441 ~~~dP~~F~PeRfl~~~~~~------~-~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  513 (543)
T PLN02971        441 VWSDPLSFKPERHLNECSEV------T-LTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVEL  513 (543)
T ss_pred             hCCCccccCcccCCCCCccc------c-ccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcch
Confidence            99999999999999653110      0 011246899999999999999999999999999999999999886  24555


Q ss_pred             ccccceEEeecCceeEEEeec
Q 038386          501 SEKAEFTIEMKNPLHARISPR  521 (523)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~r  521 (523)
                      .+..+ ++..++++.+.+.+|
T Consensus       514 ~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        514 MESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             hhhcC-cccccccceeeeeec
Confidence            55555 665677999999988


No 4  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2e-78  Score=605.22  Aligned_cols=474  Identities=44%  Similarity=0.825  Sum_probs=377.1

Q ss_pred             CCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 038386           35 TQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSI  114 (523)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~  114 (523)
                      ..+.||||+++|++||++.+.....+++.++.+|+++||++|++++|+.++|+++||+++++++.+++..|+.++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            35789999999999999866432345788999999999999999999999999999999999999888889888764422


Q ss_pred             cccceeeccccceeeCcCCchhHHHhh-hhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH
Q 038386          115 ADDLIFANKRRGISTYPYGTTWRVLRH-NFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR  193 (523)
Q Consensus       115 ~~~~~~~~~~~~i~~~~~g~~w~~~R~-~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~  193 (523)
                         .+++.+...+.+..+|+.|+++|| ++.   ++|+.++++ .+.+.+.+.++.+++.|.+...  .++.+|+.+.+.
T Consensus       113 ---~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~---~~fs~~~l~-~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~~~  183 (519)
T PLN00168        113 ---RLLGESDNTITRSSYGPVWRLLRRNLVA---ETLHPSRVR-LFAPARAWVRRVLVDKLRREAE--DAAAPRVVETFQ  183 (519)
T ss_pred             ---hhhccCCCceeCCCCCHHHHHHHHHHHH---hccCHHHHH-HHHHHHHHHHHHHHHHHHHhcC--CCCCcCHHHHHH
Confidence               344433223333358999999987 566   999999999 9999999999999999987543  345789999999


Q ss_pred             HHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHh-hhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386          194 YAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIIN-KLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK  272 (523)
Q Consensus       194 ~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  272 (523)
                      .++.++++.++||.++++.....+......+..... ...+..++|.+.+.+....+++..+..+.+.+++.++|+++++
T Consensus       184 ~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        184 YAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999865443333333332221111 1334456776554333334556667888999999999998876


Q ss_pred             HHhhhhh----cc---CCccchHHHHHHhhCCC-CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHH
Q 038386          273 IKQENEE----RD---IDSESYVDTLIELRLPS-DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKI  344 (523)
Q Consensus       273 ~~~~~~~----~~---~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  344 (523)
                      .....+.    .+   ....|+++.|++....+ ++..++++++++++.++++||+|||+.+++|++++|++||++|+|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl  343 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKL  343 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHH
Confidence            5321100    00   11468999999865322 2346999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC
Q 038386          345 LDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW  424 (523)
Q Consensus       345 ~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~  424 (523)
                      ++||+++++.+.+.++.+++++||||+|||+||||++|+++.. ++|.+.+|++++||.|||||.|.++.+++||||++|
T Consensus       344 ~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~-~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~  422 (519)
T PLN00168        344 HDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFV-LPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREW  422 (519)
T ss_pred             HHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCccc-CCccCCCCccCCCEEECCCCEEEEChHHHhcCcccc
Confidence            9999999875446689999999999999999999999999887 799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCCCcccc
Q 038386          425 EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDVDLSEK  503 (523)
Q Consensus       425 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~~~~~~  503 (523)
                      |||++|+||||++.....    ..+.....+..|+|||.|+|+|+|++||++|+++++++|+++|+|++.+ .+.+....
T Consensus       423 ~~p~~F~PeRf~~~~~~~----~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  498 (519)
T PLN00168        423 ERPMEFVPERFLAGGDGE----GVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEK  498 (519)
T ss_pred             CCccccCcccCCCCCCCc----cccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhh
Confidence            999999999999752100    0011112236799999999999999999999999999999999999876 33333333


Q ss_pred             cceEEeecCceeEEEeecC
Q 038386          504 AEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       504 ~~~~~~~~~~~~~~~~~r~  522 (523)
                      .+++..++++++|++++|+
T Consensus       499 ~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        499 REFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             ceeEEeecCCcEEEEEecc
Confidence            4567788899999999996


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.1e-77  Score=599.46  Aligned_cols=491  Identities=26%  Similarity=0.480  Sum_probs=383.6

Q ss_pred             hHHHHHHHHHHHHHHHHh-cccCcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEe
Q 038386           10 PISLFLAFLVRFILALLL-SSSSEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYI   88 (523)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v   88 (523)
                      ++++++++++++++++++ ....+.++.+.||||+++|++||++++.   .+++.++.+|+++||++|++++|+.++|++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv   82 (517)
T PLN02687          6 PLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG---PKPHHTMAALAKTYGPLFRLRFGFVDVVVA   82 (517)
T ss_pred             hHHHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC---CchhHHHHHHHHHhCCeeEEecCCceEEEe
Confidence            333333333333333333 3333445557899999999999998873   458899999999999999999999999999


Q ss_pred             cCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHH
Q 038386           89 CNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLE  168 (523)
Q Consensus        89 ~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~  168 (523)
                      +||+.+++++.++...|.+++.....   ..++..+.++++..+|+.|+++|+++.  +++|+..+++ .+.+.+++++.
T Consensus        83 ~~p~~~~~il~~~~~~f~~r~~~~~~---~~~~~~~~~~l~~~~g~~Wk~~Rr~l~--~~~fs~~~l~-~~~~~i~~~~~  156 (517)
T PLN02687         83 ASASVAAQFLRTHDANFSNRPPNSGA---EHMAYNYQDLVFAPYGPRWRALRKICA--VHLFSAKALD-DFRHVREEEVA  156 (517)
T ss_pred             CCHHHHHHHHHhcchhhhcCCCccch---hhhccCCceeEeCCCCHHHHHHHHHHH--HHhCCHHHHH-HhHHHHHHHHH
Confidence            99999999998888889888765432   223322235566668999999999997  5789999999 99999999999


Q ss_pred             HHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcc----hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhh
Q 038386          169 KLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVE----EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKIL  244 (523)
Q Consensus       169 ~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~  244 (523)
                      ++++.+.+..   +++++|+.+++..+++++++.++||.++.    ++....+......+............+|++.++.
T Consensus       157 ~l~~~l~~~~---~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~  233 (517)
T PLN02687        157 LLVRELARQH---GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLD  233 (517)
T ss_pred             HHHHHHHHhc---CCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhC
Confidence            9999997653   35789999999999999999999998862    2233445555555444332222334566543322


Q ss_pred             hHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCC----CCCCCCHHHHHHHHHHHHhhcc
Q 038386          245 FRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPS----DRKVLEESEIVSLSDEFISHGS  320 (523)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~~l~~~~i~~~~~~~~~ag~  320 (523)
                      .....++..+..+.+.+++.++|+++++....+   +....|+++.+++...++    ++..++++++++++.++++||+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  310 (517)
T PLN02687        234 LQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG---SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGT  310 (517)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhcccc
Confidence            222234556677788888899998887654221   114569999999876431    2346999999999999999999


Q ss_pred             cchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeC
Q 038386          321 DTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELG  400 (523)
Q Consensus       321 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~  400 (523)
                      |||+++++|++++|++||++|+++++|++++++.+ ..++.+++++||||+|||+|+||++|+++.. ++|.+.+|++++
T Consensus       311 eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~-~~R~~~~d~~~~  388 (517)
T PLN02687        311 DTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD-RLVSESDLPQLTYLQAVIKETFRLHPSTPLS-LPRMAAEECEIN  388 (517)
T ss_pred             CchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCCCHHHhhhCHHHHHHHHHHHccCCCcccc-ccccCCCCeeEC
Confidence            99999999999999999999999999999998754 6789999999999999999999999999986 699999999999


Q ss_pred             CEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHH
Q 038386          401 GYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEY  480 (523)
Q Consensus       401 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~  480 (523)
                      ||.|||||.|.++.+++||||++|+||++|+||||++.+.....    + ....+..|+|||.|+|.|+|++||++|+++
T Consensus       389 g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~----~-~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~  463 (517)
T PLN02687        389 GYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGV----D-VKGSDFELIPFGAGRRICAGLSWGLRMVTL  463 (517)
T ss_pred             CEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCcccc----c-cCCCceeeCCCCCCCCCCCChHHHHHHHHH
Confidence            99999999999999999999999999999999999975311100    0 011246899999999999999999999999


Q ss_pred             HHHHHhhhcEeEecCC-C---CCcccccceEEeecCceeEEEeecC
Q 038386          481 FVANLIWKFEWNKADE-D---VDLSEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       481 ~l~~ll~~f~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                      ++++||++|++++.+. .   .+.....+.++.++.++.+++++|.
T Consensus       464 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        464 LTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             HHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            9999999999998862 1   2222334556667778999998884


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.1e-77  Score=593.61  Aligned_cols=485  Identities=24%  Similarity=0.484  Sum_probs=380.9

Q ss_pred             HHHHHHHHHHHHHHHHhcccCcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecC
Q 038386           11 ISLFLAFLVRFILALLLSSSSEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICN   90 (523)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~   90 (523)
                      +..++.+++.+++..+.    ...+.+.||||+++|++||++.+   ..+++.++.+++++||+||++++|+.++|+|+|
T Consensus         9 ~~~~~~~~~~~~~~~~~----~~~~~~~pPgp~~~Pl~G~l~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~d   81 (504)
T PLN00110          9 AATLLFFITRFFIRSLL----PKPSRKLPPGPRGWPLLGALPLL---GNMPHVALAKMAKRYGPVMFLKMGTNSMVVAST   81 (504)
T ss_pred             HHHHHHHHHHHHHHHHh----hcccCCCcccCCCCCeeechhhc---CCchHHHHHHHHHHhCCeEEEEcCCccEEEECC
Confidence            33334444444443333    33344679999999999998776   345789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHH
Q 038386           91 NTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKL  170 (523)
Q Consensus        91 p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l  170 (523)
                      |+.+++++.++...|++++......  .... +..+.++..+|+.|+++|+.++  .+.|+...++ .+.+.+.+++..+
T Consensus        82 pe~~~~vl~~~~~~f~~r~~~~~~~--~~~~-~~~~~l~~~~g~~w~~~Rr~~~--~~~f~~~~l~-~~~~~i~~~~~~~  155 (504)
T PLN00110         82 PEAARAFLKTLDINFSNRPPNAGAT--HLAY-GAQDMVFADYGPRWKLLRKLSN--LHMLGGKALE-DWSQVRTVELGHM  155 (504)
T ss_pred             HHHHHHHHHhcchhhcCCCCccchh--hhcc-CCCceeeCCCCHHHHHHHHHHH--HHhCCHHHHH-HhhHHHHHHHHHH
Confidence            9999999998888898887654221  1111 2223455668999999999997  3579999999 9999999999999


Q ss_pred             HHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCc-c--hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHH
Q 038386          171 ICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNV-E--EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRK  247 (523)
Q Consensus       171 ~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~  247 (523)
                      ++.+.+...  +++++|+.+++..+++++++.++||.++ .  +...+.+...............+..++|++.++....
T Consensus       156 ~~~l~~~~~--~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~  233 (504)
T PLN00110        156 LRAMLELSQ--RGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQG  233 (504)
T ss_pred             HHHHHHhcc--CCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcch
Confidence            999877544  4678999999999999999999999876 1  2223445555555444333333445667654322222


Q ss_pred             HHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHH
Q 038386          248 RWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATAL  327 (523)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l  327 (523)
                      ..++..+..+.+.+++.++++++++.....    ....|+++.+++....+++..++++++.++++++++||+|||++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l  309 (504)
T PLN00110        234 IERGMKHLHKKFDKLLTRMIEEHTASAHER----KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVI  309 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccc----ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHH
Confidence            234555667778888888888776543111    1346899999976533234569999999999999999999999999


Q ss_pred             HHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCC
Q 038386          328 HWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKG  407 (523)
Q Consensus       328 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G  407 (523)
                      +|++++|++||++|+|+++|++++++.+ ..++.+++++||||+|||+||||++|+++.. ++|.+.+|++++||.||||
T Consensus       310 ~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~-~~R~~~~d~~~~g~~Ip~G  387 (504)
T PLN00110        310 EWSLAEMLKNPSILKRAHEEMDQVIGRN-RRLVESDLPKLPYLQAICKESFRKHPSTPLN-LPRVSTQACEVNGYYIPKN  387 (504)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCHHHhhcChHHHHHHHHHhcCCCCcccc-cccccCCCeeeCCEEECCC
Confidence            9999999999999999999999998764 5689999999999999999999999999986 6999999999999999999


Q ss_pred             CEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhh
Q 038386          408 ISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIW  487 (523)
Q Consensus       408 ~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~  487 (523)
                      |.|.++.+++|+||++|+||++|+||||++.+..     ..+. ...+..++|||.|+|.|+|++||++|+++++++|++
T Consensus       388 t~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~-----~~~~-~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~  461 (504)
T PLN00110        388 TRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNA-----KIDP-RGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVH  461 (504)
T ss_pred             CEEEEeHHHhcCChhhcCCcccCCcccccCCCCc-----cccc-CCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999965210     0000 011257999999999999999999999999999999


Q ss_pred             hcEeEecC-CCCCcccccceEEeecCceeEEEeecC
Q 038386          488 KFEWNKAD-EDVDLSEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       488 ~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                      +|++++.+ .+.+.....+.++.|+.++.+++++|.
T Consensus       462 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        462 SFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             hceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            99999876 333333345677889999999999984


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5.1e-77  Score=594.43  Aligned_cols=465  Identities=22%  Similarity=0.416  Sum_probs=371.4

Q ss_pred             CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS  113 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~  113 (523)
                      ++.+.||||+++|++||++.+.  ..++..++.+++++||++|++++|+.++|+++|||++++|+.++...|.+++....
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~--~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQME--KFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcC--CCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            3456799999999999998873  23578899999999999999999999999999999999999988888998886543


Q ss_pred             ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH
Q 038386          114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR  193 (523)
Q Consensus       114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~  193 (523)
                      ..  . +...+..+.+...++.|+++|+.+.  .++|++.+++ .+.+.+++.++++++.+.+...  +++++|+.+.+.
T Consensus       103 ~~--~-~~~~~~~~~~~~~~~~w~~~Rr~l~--~~~f~~~~l~-~~~~~i~~~~~~ll~~l~~~~~--~~~~vd~~~~~~  174 (499)
T PLN03234        103 QQ--T-MSYQGRELGFGQYTAYYREMRKMCM--VNLFSPNRVA-SFRPVREEECQRMMDKIYKAAD--QSGTVDLSELLL  174 (499)
T ss_pred             hh--h-hccCCCccccCCCcHHHHHHHHHHH--HHhcCHHHHH-HhHHHHHHHHHHHHHHHHHhcc--CCCeEEHHHHHH
Confidence            21  1 1111123334457889999999853  3899999999 9999999999999999986654  467899999999


Q ss_pred             HHHHHHhhhhhccCCcch--hHHHHHHHHHHHHHHHHhhhhHHhhccccchhh-hHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386          194 YAIFYLLVKMCFGNNVEE--QEIRELGCAQKKLFMIINKLKVFAIMPDLGKIL-FRKRWKKFLGIIRSREDVFVGLVRDR  270 (523)
Q Consensus       194 ~~~~~v~~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  270 (523)
                      .+++++++.++||.+++.  .....+.+...+.........+...+|++.... ....+++..++.+.+.+++.++|+++
T Consensus       175 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~  254 (499)
T PLN03234        175 SFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDET  254 (499)
T ss_pred             HHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998853  223444444444333222223334455543221 12234567788899999999999887


Q ss_pred             HHHHhhhhhccCCccchHHHHHHhhCCCC-CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHH
Q 038386          271 KKIKQENEERDIDSESYVDTLIELRLPSD-RKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEIN  349 (523)
Q Consensus       271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  349 (523)
                      ++....+    ....|+++.+++...++. +..++++++++++.++++||+|||+++++|++++|++||++|+++|+|++
T Consensus       255 ~~~~~~~----~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~  330 (499)
T PLN03234        255 LDPNRPK----QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVR  330 (499)
T ss_pred             HhhcccC----CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            6542111    134689999987653322 23689999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC-CCCC
Q 038386          350 GVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW-EDPL  428 (523)
Q Consensus       350 ~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~  428 (523)
                      +++++. ..++.+++++||||+|||+|+||++|+++.. ++|.+.+|++++||.|||||.|.++.+++||||++| +||+
T Consensus       331 ~~~~~~-~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~-~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~  408 (499)
T PLN03234        331 NVIGDK-GYVSEEDIPNLPYLKAVIKESLRLEPVIPIL-LHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPN  408 (499)
T ss_pred             HHhCCC-CCCCHHHHhcChHHHHHHHHHhccCCCcccc-CCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChh
Confidence            998754 6689999999999999999999999999986 689999999999999999999999999999999999 8999


Q ss_pred             CCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC--C--CCccccc
Q 038386          429 EFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE--D--VDLSEKA  504 (523)
Q Consensus       429 ~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~--~--~~~~~~~  504 (523)
                      +|+||||++.+..    .  +. ...+..|+|||.|+|.|+|+++|++|+++++|+|+++|+|++.+.  +  .......
T Consensus       409 ~F~PeR~l~~~~~----~--~~-~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  481 (499)
T PLN03234        409 EFIPERFMKEHKG----V--DF-KGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMT  481 (499)
T ss_pred             hcCchhhcCCCCC----c--Cc-CCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccc
Confidence            9999999975310    0  01 112468999999999999999999999999999999999999862  1  2333455


Q ss_pred             ceEEeecCceeEEEeec
Q 038386          505 EFTIEMKNPLHARISPR  521 (523)
Q Consensus       505 ~~~~~~~~~~~~~~~~r  521 (523)
                      +++..+++.+.+..++|
T Consensus       482 ~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        482 GLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             ccccccCCCeEEEeecC
Confidence            66667888888888876


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.5e-76  Score=592.72  Aligned_cols=492  Identities=25%  Similarity=0.445  Sum_probs=384.4

Q ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCH
Q 038386           12 SLFLAFLVRFILALLLSSSSEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNN   91 (523)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p   91 (523)
                      .+++++++++++.+++...+..++.+.||||+++|++||++++   ..+++.++.+++++||++|++++|+.++++++||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~---~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp   83 (514)
T PLN03112          7 SLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQL---GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDP   83 (514)
T ss_pred             HHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhc---CCchHHHHHHHHHHhCCeEEEEecCccEEEECCH
Confidence            3344444444444444444566667899999999999999887   3467899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHH
Q 038386           92 TLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLI  171 (523)
Q Consensus        92 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~  171 (523)
                      +.+++|+.++.+.|++++...... ...++.  ..+++..+|+.|+++|+.+.  .++|+.++++ .+.+.+.++++.++
T Consensus        84 e~~~~vl~~~~~~f~~~~~~~~~~-~~~~g~--~~~~~~~~g~~wk~~Rr~~~--~~~f~~~~l~-~~~~~~~~~~~~lv  157 (514)
T PLN03112         84 ELIREILLRQDDVFASRPRTLAAV-HLAYGC--GDVALAPLGPHWKRMRRICM--EHLLTTKRLE-SFAKHRAEEARHLI  157 (514)
T ss_pred             HHHHHHHHhCCcccccCCCcccce-eeccCC--CceEeCCCCHHHHHHHHHHH--HHhcCHHHHH-HhhHHHHHHHHHHH
Confidence            999999988888899887653221 012222  23445568999999999965  3789999999 99999999999999


Q ss_pred             HHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcch------hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhh
Q 038386          172 CELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEE------QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILF  245 (523)
Q Consensus       172 ~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~  245 (523)
                      +.+.+...  +++++|+.+.++.+++++++.++||.++..      +....+......+...........++|.+..+..
T Consensus       158 ~~l~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  235 (514)
T PLN03112        158 QDVWEAAQ--TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP  235 (514)
T ss_pred             HHHHHhhc--cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc
Confidence            98766543  367899999999999999999999988621      2234455554444433222233345565443222


Q ss_pred             HHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHH
Q 038386          246 RKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIAT  325 (523)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~  325 (523)
                      ....++..+..+.+.+++.++++++++..+..+. ..+..|+++.++++..++.+..++++++.+++.++++||+|||++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~  314 (514)
T PLN03112        236 YGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLP-GGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAV  314 (514)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-CCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHH
Confidence            2234556677788888899999887765422211 113468999999865432334599999999999999999999999


Q ss_pred             HHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeC
Q 038386          326 ALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVT  405 (523)
Q Consensus       326 ~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip  405 (523)
                      +++|++++|++||++|+++++||+++++.+ +.++.+++++||||+|||+||+|++|+++.. ++|.+.+|+.++||.||
T Consensus       315 ~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~-~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~-~~R~~~~d~~i~g~~IP  392 (514)
T PLN03112        315 TNEWAMAEVIKNPRVLRKIQEELDSVVGRN-RMVQESDLVHLNYLRCVVRETFRMHPAGPFL-IPHESLRATTINGYYIP  392 (514)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHHHhcCCC-CcCChhhhccCcHHHHHHHHHhccCCCcccc-cccccCCCeeEcCEEeC
Confidence            999999999999999999999999998764 5689999999999999999999999999976 68999999999999999


Q ss_pred             CCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHH
Q 038386          406 KGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANL  485 (523)
Q Consensus       406 ~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l  485 (523)
                      |||.|.++.+++||||++|+||++|+||||...+....+     .....+..|+|||.|+|.|+|++||++|+++++++|
T Consensus       393 kGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~-----~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~l  467 (514)
T PLN03112        393 AKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVE-----ISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARL  467 (514)
T ss_pred             CCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccc-----cccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998754211000     001123579999999999999999999999999999


Q ss_pred             hhhcEeEecCC----CCCcccccceEEeecCceeEEEeecC
Q 038386          486 IWKFEWNKADE----DVDLSEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       486 l~~f~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                      |++|+|++.+.    +.+.....++++.++++++++++||.
T Consensus       468 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        468 FHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             HHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence            99999998752    12222334566677889999999995


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.1e-76  Score=588.99  Aligned_cols=460  Identities=25%  Similarity=0.438  Sum_probs=362.2

Q ss_pred             CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 038386           36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA  115 (523)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  115 (523)
                      .+.||||+++|++|+++.+   ....+.++.+|+++||++|++++|+.++|+|+||+++++|+.+++..|+.++......
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMM---DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCcCCCCCCeeccHHhc---CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            4789999999999999876   2345678999999999999999999999999999999999988888888887643322


Q ss_pred             ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386          116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA  195 (523)
Q Consensus       116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~  195 (523)
                        .+.+. ....++..+|+.|+++|+++.  +++|+...++ .+.+. .++++.+++.+...    .++++|+.+++..+
T Consensus       112 --~~~~~-~~~~l~~~~g~~w~~~Rr~~~--~~~f~~~~l~-~~~~~-~~~~~~~~~~l~~~----~~~~v~~~~~~~~~  180 (516)
T PLN02183        112 --YLTYD-RADMAFAHYGPFWRQMRKLCV--MKLFSRKRAE-SWASV-RDEVDSMVRSVSSN----IGKPVNIGELIFTL  180 (516)
T ss_pred             --ccccC-CCceEeCCCChHHHHHHHHHH--HHhcCHHHHH-HHHHH-HHHHHHHHHHHHhc----CCCcEeHHHHHHHH
Confidence              22222 234455668999999999843  3899999998 88886 46789999998642    36789999999999


Q ss_pred             HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Q 038386          196 IFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQ  275 (523)
Q Consensus       196 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  275 (523)
                      +++++++++||.+++... +.+......+............+|++..+.....+++..+..+.+.+++.++|+++++...
T Consensus       181 ~~~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (516)
T PLN02183        181 TRNITYRAAFGSSSNEGQ-DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRK  259 (516)
T ss_pred             HHHHHHhHhhcCcccchH-HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999875422 3344444444333333334456676543322223456667788888899998988876543


Q ss_pred             hhhh---ccCCccchHHHHHHhhCCCC----------CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHH
Q 038386          276 ENEE---RDIDSESYVDTLIELRLPSD----------RKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQA  342 (523)
Q Consensus       276 ~~~~---~~~~~~d~l~~ll~~~~~~~----------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  342 (523)
                      ..+.   .+....|+++.+++...++.          ...++++++++++.++++||+|||+.+++|++++|++||++|+
T Consensus       260 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~  339 (516)
T PLN02183        260 NQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLK  339 (516)
T ss_pred             ccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHH
Confidence            2211   11134689999998654311          2358999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCC
Q 038386          343 KILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPN  422 (523)
Q Consensus       343 ~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~  422 (523)
                      |+++|++++++.+ ..++.+++++||||+|||+||||++|++|..  .|.+.+|++++||.|||||.|.++.+++||||+
T Consensus       340 kl~~Ei~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~--~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~  416 (516)
T PLN02183        340 RVQQELADVVGLN-RRVEESDLEKLTYLKCTLKETLRLHPPIPLL--LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKN  416 (516)
T ss_pred             HHHHHHHHHcCCC-CCCCHHHhccChHHHHHHHHHhccCCCccce--eeeccCceeECCEEECCCCEEEEehhhhcCCcc
Confidence            9999999998754 5689999999999999999999999999987  799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCC---
Q 038386          423 VWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDV---  498 (523)
Q Consensus       423 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~---  498 (523)
                      +|+||++|+||||++.+.   +    +. ...+..|+|||.|+|.|+|++||++|+++++|+|+++|++++.+ ..+   
T Consensus       417 ~~~dP~~F~PeRfl~~~~---~----~~-~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~  488 (516)
T PLN02183        417 SWEDPDTFKPSRFLKPGV---P----DF-KGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEL  488 (516)
T ss_pred             ccCCccccCchhhCCCCC---c----cc-cCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCC
Confidence            999999999999996531   0    00 01236899999999999999999999999999999999999876 222   


Q ss_pred             CcccccceEEeecCceeEEEeec
Q 038386          499 DLSEKAEFTIEMKNPLHARISPR  521 (523)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~r  521 (523)
                      +.....+.+..++.++.+.+++|
T Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        489 DMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             ChhhccccccccCCCcEEEeecC
Confidence            22222344434555777777777


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=8.6e-76  Score=586.18  Aligned_cols=469  Identities=24%  Similarity=0.412  Sum_probs=357.2

Q ss_pred             cCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386           32 EISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS  111 (523)
Q Consensus        32 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~  111 (523)
                      ..++.+.||||+++|++|+++.+.  ....+..+.+|+++||++|++++|+.++|+|+||+.+++++.+++..|.+++..
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~--~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVG--DDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcC--CCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            334567899999999999998773  233578999999999999999999999999999999999998887778877654


Q ss_pred             CcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH
Q 038386          112 TSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH  191 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~  191 (523)
                      ....  .+.+. +.+.++..+|+.|+++|+.+.  .++|++..++ .+.+.++++++.+++.+.+.... .++.+|+.+.
T Consensus       103 ~~~~--~~~g~-~~~~l~~~~g~~w~~~Rk~~~--~~~f~~~~l~-~~~~~i~~~v~~lv~~l~~~~~~-~~~~v~~~~~  175 (503)
T PLN02394        103 VVFD--IFTGK-GQDMVFTVYGDHWRKMRRIMT--VPFFTNKVVQ-QYRYGWEEEADLVVEDVRANPEA-ATEGVVIRRR  175 (503)
T ss_pred             chHh--HhccC-CCceeecCCCHHHHHHHHHHH--HHhcChHHHH-HhhHHHHHHHHHHHHHHHHhhhc-cCCcEecHHH
Confidence            3222  33332 334555668999999999985  4889999999 99999999999999999765321 2456999999


Q ss_pred             HHHHHHHHhhhhhccCCcchh---HHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHH-HHHH
Q 038386          192 FRYAIFYLLVKMCFGNNVEEQ---EIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSRED-VFVG  265 (523)
Q Consensus       192 ~~~~~~~v~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~  265 (523)
                      ++.+++|+++.++||.+++..   ....+.............  ..+..++|++.+.+ ....+........... +...
T Consensus       176 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  254 (503)
T PLN02394        176 LQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDY  254 (503)
T ss_pred             HHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988422   222222222221111110  11223344433211 1111112222222222 3344


Q ss_pred             HHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHH
Q 038386          266 LVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKIL  345 (523)
Q Consensus       266 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  345 (523)
                      +++++++..+..+.+.....|+++.|+++.   .++.++++++..++.++++||+|||+.+++|++++|++||++|++|+
T Consensus       255 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~---~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~  331 (503)
T PLN02394        255 FVDERKKLMSAKGMDKEGLKCAIDHILEAQ---KKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR  331 (503)
T ss_pred             HHHHHHHHhhhccCCcchhhhHHHHHHhcc---ccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHH
Confidence            566665443211111113468999999876   33458999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCC
Q 038386          346 DEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWE  425 (523)
Q Consensus       346 ~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  425 (523)
                      +||+++.+.+ ..++.+++++||||+|||+||||++|++|.. ++|.+.+|++++||.||+||.|.++.+++||||++|+
T Consensus       332 ~Ei~~v~~~~-~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~-~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~  409 (503)
T PLN02394        332 DELDTVLGPG-NQVTEPDTHKLPYLQAVVKETLRLHMAIPLL-VPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWK  409 (503)
T ss_pred             HHHHHHhCCC-CCCCHhHHhhCHHHHHHHHHHHhcCCCcccc-cceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCC
Confidence            9999998764 5678999999999999999999999999988 7899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC--CCCcccc
Q 038386          426 DPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE--DVDLSEK  503 (523)
Q Consensus       426 ~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~--~~~~~~~  503 (523)
                      ||++|+||||++.+....      . ......|+|||.|+|.|+|++||++|+++++|+|+++|+|++.++  ..+..+.
T Consensus       410 ~P~~F~PeRwl~~~~~~~------~-~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  482 (503)
T PLN02394        410 NPEEFRPERFLEEEAKVE------A-NGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEK  482 (503)
T ss_pred             CccccCccccCCCCCccc------c-cCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccc
Confidence            999999999996531000      0 112367999999999999999999999999999999999998763  2344444


Q ss_pred             cc-eEEeecCceeEEEeecC
Q 038386          504 AE-FTIEMKNPLHARISPRV  522 (523)
Q Consensus       504 ~~-~~~~~~~~~~~~~~~r~  522 (523)
                      .+ +.+..+.+++|++.+|.
T Consensus       483 ~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        483 GGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             cCceeeccCCCceEEeecCC
Confidence            53 56657889999999996


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.7e-75  Score=582.27  Aligned_cols=462  Identities=23%  Similarity=0.427  Sum_probs=357.0

Q ss_pred             CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS  113 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~  113 (523)
                      +..+.||||+++|++||++.+.  ..+++.++.+|+++||++|++++|+.++|+++||+.+++|+.++...|.+++....
T Consensus        26 ~~~~~ppgp~~~p~~G~l~~l~--~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGNLLQLQ--KLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             CCCCCCcCCCCCCeeccHHhcC--CCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            3456799999999999998873  34688999999999999999999999999999999999999887777877664432


Q ss_pred             ccccceeeccccceeeCcCCchhHHHhhh-hccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH
Q 038386          114 IADDLIFANKRRGISTYPYGTTWRVLRHN-FTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF  192 (523)
Q Consensus       114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~-l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~  192 (523)
                      .   .....+...+.+..+|+.|+++|+. +.   ++|++.+++ .+.+.+++.+.++++.|.+...  +++++|+.+++
T Consensus       104 ~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~~~~--~~~~vdl~~~~  174 (502)
T PLN02966        104 H---EFISYGRRDMALNHYTPYYREIRKMGMN---HLFSPTRVA-TFKHVREEEARRMMDKINKAAD--KSEVVDISELM  174 (502)
T ss_pred             c---eeeccCcceeeeCCCCHHHHHHHHHHHH---HhcCHHHHH-HHHHHHHHHHHHHHHHHHHhcc--CCCceeHHHHH
Confidence            1   2222222334445579999999999 65   999999999 9999999999999999987654  46689999999


Q ss_pred             HHHHHHHhhhhhccCCcch--hHHHHHHHHHHHHHHHHhhhhHHhhccccchhh-hHHHHHHHHHhHHhHHHHHHHHHHH
Q 038386          193 RYAIFYLLVKMCFGNNVEE--QEIRELGCAQKKLFMIINKLKVFAIMPDLGKIL-FRKRWKKFLGIIRSREDVFVGLVRD  269 (523)
Q Consensus       193 ~~~~~~v~~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  269 (523)
                      ..+++++++.++||.+++.  +....+.+.............+..++|++..+. .....+......+...+++.+.+++
T Consensus       175 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  254 (502)
T PLN02966        175 LTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNE  254 (502)
T ss_pred             HHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998842  233344444433333322223344555432211 0111122233455566667777766


Q ss_pred             HHHHHhhhhhccCCccchHHHHHHhhCCCC-CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHH
Q 038386          270 RKKIKQENEERDIDSESYVDTLIELRLPSD-RKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEI  348 (523)
Q Consensus       270 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  348 (523)
                      +.+.....    ....|+++.+++..+++. +..++++++.++++++++||+|||+++++|++++|++||++|+|+++||
T Consensus       255 ~~~~~~~~----~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei  330 (502)
T PLN02966        255 TLDPKRVK----PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEV  330 (502)
T ss_pred             HHhccccc----cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            54432111    134689999998764322 3469999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcC-CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC-CC
Q 038386          349 NGVVEQG-QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW-ED  426 (523)
Q Consensus       349 ~~~~~~~-~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~  426 (523)
                      +++++.+ +..++.+++++||||+|||+|+||++|+++.. ++|.+.+|++++||.|||||.|.++.+++||||++| ||
T Consensus       331 ~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~-~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~d  409 (502)
T PLN02966        331 REYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLL-IPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPN  409 (502)
T ss_pred             HHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccc-cCcccCCCeeEccEEECCCCEEEEecccccCCcccccCC
Confidence            9998753 24578999999999999999999999999986 689999999999999999999999999999999999 99


Q ss_pred             CCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC-C---CCccc
Q 038386          427 PLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE-D---VDLSE  502 (523)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~-~---~~~~~  502 (523)
                      |++|+||||++.+.+        . ...+..|+|||.|+|+|+|++||++|+++++|+||++|+|++.+. .   .+.+.
T Consensus       410 P~~F~PeRwl~~~~~--------~-~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~  480 (502)
T PLN02966        410 PDEFRPERFLEKEVD--------F-KGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDV  480 (502)
T ss_pred             hhhCChhhhcCCCCC--------c-CCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCccc
Confidence            999999999965310        0 012468999999999999999999999999999999999998762 1   22233


Q ss_pred             ccceEEeecCceeEEEee
Q 038386          503 KAEFTIEMKNPLHARISP  520 (523)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~  520 (523)
                      ..+++..++..++++.+|
T Consensus       481 ~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        481 MTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             ccCeeeccCCCeEEEEEe
Confidence            445554344455544444


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.9e-75  Score=580.54  Aligned_cols=449  Identities=22%  Similarity=0.309  Sum_probs=354.8

Q ss_pred             CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS  113 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~  113 (523)
                      ...+.+|||+++|++||++.+.   .+++..+.+++++||++|++++|+.++|+++||+.+++|+.++...|.+++....
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLG---NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhc---ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            3357799999999999998873   3688999999999999999999999999999999999999877777887776543


Q ss_pred             ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH
Q 038386          114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR  193 (523)
Q Consensus       114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~  193 (523)
                      ..  .  +..+.+++.. +|+.|+++|+++.   +.|+...++ .+.+.+.+.+..+++.|.+...  .++.+|+.+++.
T Consensus       103 ~~--~--~~~~~~l~~~-~g~~w~~~Rk~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~  171 (482)
T PTZ00404        103 IK--H--GTFYHGIVTS-SGEYWKRNREIVG---KAMRKTNLK-HIYDLLDDQVDVLIESMKKIES--SGETFEPRYYLT  171 (482)
T ss_pred             ee--e--eccCCceecc-ChHHHHHHHHHHH---HHHhhhccc-cHHHHHHHHHHHHHHHHHHHHh--cCCccCHHHHHH
Confidence            22  1  1112455544 8999999999999   999999999 9999999999999999987554  366799999999


Q ss_pred             HHHHHHhhhhhccCCcch------hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHH
Q 038386          194 YAIFYLLVKMCFGNNVEE------QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLV  267 (523)
Q Consensus       194 ~~~~~v~~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  267 (523)
                      .+++++++.++||.+++.      +....+......++...........++++...+ ....+...+..+.+.+++.+.+
T Consensus       172 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  250 (482)
T PTZ00404        172 KFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKY  250 (482)
T ss_pred             HHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988742      112334444444443322222222222222111 1111223345566666666666


Q ss_pred             HHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386          268 RDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE  347 (523)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  347 (523)
                      +++++..   +.  ....|+++.++++..+  .+..+.+++++++.++++||+|||+.+++|++++|++||++|+||++|
T Consensus       251 ~~~~~~~---~~--~~~~dll~~ll~~~~~--~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~E  323 (482)
T PTZ00404        251 HEHLKTI---DP--EVPRDLLDLLIKEYGT--NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNE  323 (482)
T ss_pred             HHHHHcc---CC--CCcccHHHHHHHHhcc--CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence            6554432   11  1346899999987521  122233458899999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee-CCEEeCCCCEEeeccccccCCCCCCCC
Q 038386          348 INGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL-GGYLVTKGISVNFLVADMGRDPNVWED  426 (523)
Q Consensus       348 i~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~  426 (523)
                      ++++++++ ..++.+++++||||+|||+||||++|+++.. ++|.+.+|+++ +||.|||||.|.++.+++||||++|||
T Consensus       324 i~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~-~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~d  401 (482)
T PTZ00404        324 IKSTVNGR-NKVLLSDRQSTPYTVAIIKETLRYKPVSPFG-LPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFEN  401 (482)
T ss_pred             HHHHhcCC-CCCCccccccChHHHHHHHHHHHhcCCcccc-cceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCC
Confidence            99998764 5679999999999999999999999999975 69999999999 999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCCCcccccc
Q 038386          427 PLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDVDLSEKAE  505 (523)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~~~~~~~~  505 (523)
                      |++|+||||++..              .+..|+|||.|+|.|+|++||++|+++++++|+++|++++.+ .+++.....+
T Consensus       402 P~~F~PeRwl~~~--------------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  467 (482)
T PTZ00404        402 PEQFDPSRFLNPD--------------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYG  467 (482)
T ss_pred             ccccCccccCCCC--------------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccc
Confidence            9999999998652              136899999999999999999999999999999999999876 3323333445


Q ss_pred             eEEeecCceeEEEeec
Q 038386          506 FTIEMKNPLHARISPR  521 (523)
Q Consensus       506 ~~~~~~~~~~~~~~~r  521 (523)
                      +++. +.+++|++++|
T Consensus       468 ~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        468 LTLK-PNKFKVLLEKR  482 (482)
T ss_pred             eeec-CCCceeeeecC
Confidence            6666 67899999987


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.8e-76  Score=580.20  Aligned_cols=457  Identities=27%  Similarity=0.452  Sum_probs=368.2

Q ss_pred             CCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC-c
Q 038386           35 TQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST-S  113 (523)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~  113 (523)
                      ....||||+++|++|+++.+......+..++.++..+||++|+.|+|+.++|+++||+.+++|+.++...+.+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            456699999999999999986422567889999999999999999999999999999999999966666666666665 3


Q ss_pred             ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH
Q 038386          114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR  193 (523)
Q Consensus       114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~  193 (523)
                      +.  .++|.   ++++. +|+.|+++|++++   ++|+...++ .+...+.+.+..+...+.....   ++.+|+.+.++
T Consensus       113 ~~--~~lG~---gll~~-~g~~W~~~Rk~~~---~~f~~~~L~-~~~~~~~~~~~~~~~~~~~~~~---~~~vd~~~~~~  179 (497)
T KOG0157|consen  113 LK--PWLGD---GLLFS-DGEKWHKHRKLLT---PAFHFEILK-SFVPVFIESSLILLLLLELAAS---GEEVDLQDLLK  179 (497)
T ss_pred             HH--HHhcC---ccccC-CchHHHHHHhhcc---HhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhc---CCeEcHHHHHH
Confidence            33  45553   66666 4999999999999   999999999 9999999999988888877543   33499999999


Q ss_pred             HHHHHHhhhhhccCCc---chhHHHHHHHHHHHHHHHHhhhhHHhhcc-ccchhhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 038386          194 YAIFYLLVKMCFGNNV---EEQEIRELGCAQKKLFMIINKLKVFAIMP-DLGKILFRKRWKKFLGIIRSREDVFVGLVRD  269 (523)
Q Consensus       194 ~~~~~v~~~~~fG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  269 (523)
                      .+++|+++.++||...   ..+....+.+++......   .......| +...+......++..++.+.+++++.++|.+
T Consensus       180 ~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~  256 (497)
T KOG0157|consen  180 RLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLTEL---ISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRE  256 (497)
T ss_pred             HHHHHHHHHHhcCCccccccCCcccHHHHHHHHHHHH---HHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999332   122222333333322222   22333444 3222222225678889999999999999999


Q ss_pred             HHHHHhhhhhcc-CCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHH
Q 038386          270 RKKIKQENEERD-IDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEI  348 (523)
Q Consensus       270 ~~~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  348 (523)
                      +++...+.+.++ ....|+++.+...    .+..++++++++++.++++||+||||++++|+++.|+.||++|+++++|+
T Consensus       257 rr~~~~~~~~~~~~~~~d~L~~~~~~----~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi  332 (497)
T KOG0157|consen  257 RREELEKEGSGEEKKRLDFLDTLLLE----EDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEV  332 (497)
T ss_pred             HHHHHHhcCCcccchhhhHHHHHHHh----ccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            998875443221 2557788763322    22779999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee-CCEEeCCCCEEeeccccccCCCCCCC-C
Q 038386          349 NGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL-GGYLVTKGISVNFLVADMGRDPNVWE-D  426 (523)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~-~  426 (523)
                      ++++++++........++|+||++||+|||||+|++|..  .|.+.+|+++ +||.||||+.|.++++++|||+++|+ |
T Consensus       333 ~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~--~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~d  410 (497)
T KOG0157|consen  333 DEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV--ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGED  410 (497)
T ss_pred             HHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh--hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCC
Confidence            999986433323333336999999999999999999988  9999999999 58999999999999999999999995 9


Q ss_pred             CCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccce
Q 038386          427 PLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEF  506 (523)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  506 (523)
                      |++||||||++.+...         ..+++.|+|||+|+|.|+|++||++|+++++++|+++|+|++..+.. .......
T Consensus       411 p~~F~PeRf~~~~~~~---------~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-~~~~~~~  480 (497)
T KOG0157|consen  411 PEEFDPERFLDGEEKA---------KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-PKPVPEL  480 (497)
T ss_pred             hhhcCccccCCCCCcC---------CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-ceeeeEE
Confidence            9999999999764111         22468999999999999999999999999999999999999887322 5566788


Q ss_pred             EEeecCceeEEEeecCC
Q 038386          507 TIEMKNPLHARISPRVN  523 (523)
Q Consensus       507 ~~~~~~~~~~~~~~r~~  523 (523)
                      +++++++++|++++|..
T Consensus       481 ~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  481 TLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             EEEecCCeEEEEEeCCC
Confidence            99999999999999974


No 14 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-75  Score=539.68  Aligned_cols=460  Identities=23%  Similarity=0.337  Sum_probs=392.1

Q ss_pred             CCCCCCCCccceeeecccccC-CCCCccHHHHHHHhhcCCeEEEE-eCCEeEEEecCHHHHHHHHHhCCcccccCC-CCC
Q 038386           36 QNLPPGPPRFHLLAHLLWHRK-PLFQLGPIISTLRLKYGPIITVR-MGSEPSIYICNNTLAHQALINNGTVFADRP-KST  112 (523)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~~kyG~i~~~~-~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~  112 (523)
                      ...+|||+++|++|.+..+.. ...+.|+....++++||+||+.. +|+...|.|.||++++.+++.++ .++.|+ ...
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~  127 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIE  127 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccc
Confidence            356999999999999874322 34578999999999999999999 88899999999999999996554 568885 333


Q ss_pred             ccccc-ceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhh-cCCCeeehhH
Q 038386          113 SIADD-LIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCE-CRGDGVYVCE  190 (523)
Q Consensus       113 ~~~~~-~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~vd~~~  190 (523)
                      .+..+ +.++ +..|++.. +|+.|++.|..++  +.++++++.+ .|.+.+++.+++++..+....+. ....+.|+.+
T Consensus       128 ~w~~~rd~~~-~~~Gl~~~-~G~~W~~~Rs~ln--~~ll~P~~v~-~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~  202 (519)
T KOG0159|consen  128 PWVAYRDFRG-GVCGLFLL-EGPEWQRLRSALN--PLLLQPQAVR-RYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQ  202 (519)
T ss_pred             hhhhhHHhhc-cCCCcccC-CCHHHHHHHHHhc--hhhcCHHHHH-HHhhHHHHHHHHHHHHHHHHhcccccccchhHHH
Confidence            33322 3333 44566555 9999999999999  7888999999 99999999999999999988663 1234679999


Q ss_pred             HHHHHHHHHhhhhhccCCcc------hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHH
Q 038386          191 HFRYAIFYLLVKMCFGNNVE------EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFV  264 (523)
Q Consensus       191 ~~~~~~~~v~~~~~fG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  264 (523)
                      .+.++++..++.++||.+++      +++.+.+..++..++...   .-..+.|.+++++.++.|+++.++.+.+.++..
T Consensus       203 ~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s---~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~  279 (519)
T KOG0159|consen  203 ELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESS---AQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGD  279 (519)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhH---HHHHhcchHHHhCCChHHHHHHHHHHHHHHHHH
Confidence            99999999999999999983      466677777887777764   344567778888889999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHH
Q 038386          265 GLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKI  344 (523)
Q Consensus       265 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  344 (523)
                      ++|++..+..++++....+....+..++      ..++++.+++...++++++||.||||.++.|+||+|++||++|++|
T Consensus       280 ~~Id~~l~~l~~~~~~~~~~~~~l~~~L------~~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L  353 (519)
T KOG0159|consen  280 KYIDNALEELEKQDSAGSEYTGSLLELL------LRKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRL  353 (519)
T ss_pred             HHHHHHHHHHHhccccccchhHHHHHHH------HHccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHH
Confidence            9999999988665432112223333333      2234899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC
Q 038386          345 LDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW  424 (523)
Q Consensus       345 ~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~  424 (523)
                      ++|+.++.+..+..++.+++.++|||+||||||+||||++|+.  .|+..+|++++||.|||||.|.++.+.+.+||++|
T Consensus       354 ~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~--~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F  431 (519)
T KOG0159|consen  354 REEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN--GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYF  431 (519)
T ss_pred             HHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc--ccccchhceeccceecCCCeEEEeehhhccChhhC
Confidence            9999999998778899999999999999999999999999987  99999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCccccc
Q 038386          425 EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKA  504 (523)
Q Consensus       425 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  504 (523)
                      ++|++|+||||++++.          ...+|..++|||.|+|+|+||++|++|+-++||+++++|+++..+. .+.....
T Consensus       432 ~~p~~F~PeRWL~~~~----------~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~-~pv~~~~  500 (519)
T KOG0159|consen  432 PDPEEFLPERWLKPST----------KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE-EPVEYVY  500 (519)
T ss_pred             CCccccChhhhccccc----------CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC-CCcccee
Confidence            9999999999998841          2346799999999999999999999999999999999999998862 4556667


Q ss_pred             ceEEeecCceeEEEeecCC
Q 038386          505 EFTIEMKNPLHARISPRVN  523 (523)
Q Consensus       505 ~~~~~~~~~~~~~~~~r~~  523 (523)
                      .+++.|..++.+++++|++
T Consensus       501 ~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  501 RFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             EEEEcCCCCcceeeeeCCC
Confidence            8899999999999999974


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.4e-75  Score=573.80  Aligned_cols=455  Identities=25%  Similarity=0.413  Sum_probs=361.7

Q ss_pred             CCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccc
Q 038386           39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDL  118 (523)
Q Consensus        39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~  118 (523)
                      ||||+++|++||++++.  ..+++.++.+|+++||++|++++|+.++|+|+||+.+++|+.++...|++++.....   .
T Consensus         1 ppgp~~lP~iG~l~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~---~   75 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLK--EKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL---T   75 (466)
T ss_pred             CcCCCCCCccccHHHcC--CCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH---H
Confidence            79999999999998883  346889999999999999999999999999999999999999988899888754333   2


Q ss_pred             eeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHH
Q 038386          119 IFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFY  198 (523)
Q Consensus       119 ~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~  198 (523)
                      .++.++..+....+|+.|+++|+.+.  +++|+...++ .+.+.+++.++.+++.+.+...+..++++|+.+.++.++++
T Consensus        76 ~~~~~~~~~~~~~~g~~wr~~Rr~~~--~~~~s~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~d  152 (466)
T PLN02655         76 VLTRDKSMVATSDYGDFHKMVKRYVM--NNLLGANAQK-RFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFG  152 (466)
T ss_pred             HHhcCCCceeeCCCcHHHHHHHHHHH--HHhcCchHHH-HhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHH
Confidence            23322334555556999999998776  4778888888 89999999999999998765432135789999999999999


Q ss_pred             HhhhhhccCCcchhH---H-------HHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHH
Q 038386          199 LLVKMCFGNNVEEQE---I-------RELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVR  268 (523)
Q Consensus       199 v~~~~~fG~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  268 (523)
                      +++.++||.+++...   .       +.+......+........+..++|.+..+......+...+....+.+++.++++
T Consensus       153 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  232 (466)
T PLN02655        153 LSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIK  232 (466)
T ss_pred             HHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998874311   1       112222233333222223345667554332111112233334445677778887


Q ss_pred             HHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHH
Q 038386          269 DRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEI  348 (523)
Q Consensus       269 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  348 (523)
                      ++++....+.    +..|+++.+++..     ..++++++.+++.++++||+|||+.+++|++++|++||++|+++++||
T Consensus       233 ~~~~~~~~~~----~~~d~l~~ll~~~-----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei  303 (466)
T PLN02655        233 QQKKRIARGE----ERDCYLDFLLSEA-----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREI  303 (466)
T ss_pred             HHHHhhcCCC----CcccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            7776532221    3458999999754     348999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCC
Q 038386          349 NGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPL  428 (523)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  428 (523)
                      +++.+.+  .++.++++++|||+|||+||||++|+++.. .+|.+.+|++++||.|||||.|+++.+++||||++|+||+
T Consensus       304 ~~~~~~~--~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~-~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~  380 (466)
T PLN02655        304 REVCGDE--RVTEEDLPNLPYLNAVFHETLRKYSPVPLL-PPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPE  380 (466)
T ss_pred             HHHhCCC--CCCHHHHhcChHHHHHHHHHhccCCCcCCC-CCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChh
Confidence            9998763  389999999999999999999999999987 7899999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEE
Q 038386          429 EFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTI  508 (523)
Q Consensus       429 ~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  508 (523)
                      +|+||||++.+..          ......++|||+|+|.|||++||..|+++++++||++|++++.++..+.....++++
T Consensus       381 ~F~PeR~~~~~~~----------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  450 (466)
T PLN02655        381 EWDPERFLGEKYE----------SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTT  450 (466)
T ss_pred             ccCccccCCCCcc----------cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeE
Confidence            9999999965310          012367999999999999999999999999999999999998763222334457778


Q ss_pred             eecCceeEEEeecCC
Q 038386          509 EMKNPLHARISPRVN  523 (523)
Q Consensus       509 ~~~~~~~~~~~~r~~  523 (523)
                      .+++++.|++.+|.+
T Consensus       451 ~~~~~~~~~~~~r~~  465 (466)
T PLN02655        451 QKLHPLHAHLKPRGS  465 (466)
T ss_pred             eecCCcEEEEeecCC
Confidence            899999999999964


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=5.5e-75  Score=577.36  Aligned_cols=480  Identities=20%  Similarity=0.307  Sum_probs=357.6

Q ss_pred             CcccchhhhhHHHHHHHHHHHHHHH-HhcccCcCCCCCCCCCCCccceeeecccccC--CCCCccHHHHHHHhhcCCeEE
Q 038386            1 MEILYYIIIPISLFLAFLVRFILAL-LLSSSSEISTQNLPPGPPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGPIIT   77 (523)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~i~~   77 (523)
                      |.|.+..+...+.++..++++++.. +++...+.+..+.||||+++|++||++.+..  ..+.+++++.+++++||++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~   80 (490)
T PLN02500          1 MAMMMSHTELLLFLLPSILSLLLVFILTKRRPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYR   80 (490)
T ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHHhCccccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhccccc
Confidence            4454444444333333333232322 3333344555678999999999999875532  124677889999999999999


Q ss_pred             EEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhh
Q 038386           78 VRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKF  157 (523)
Q Consensus        78 ~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~  157 (523)
                      +++|+.++|+++||+++++++.+++..|..+.... ..  .+++.  .++++. +|+.|+++|++++   +.|+..+++ 
T Consensus        81 ~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~-~~--~~~g~--~~~~~~-~g~~wr~~Rk~~~---~~f~~~~l~-  150 (490)
T PLN02500         81 SNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS-IG--GILGK--WSMLVL-VGDMHRDMRSISL---NFLSHARLR-  150 (490)
T ss_pred             ccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH-HH--HHhCc--cccccc-CCHHHHHHHHHHH---HhcChHHHH-
Confidence            99999999999999999999988777775432111 11  23332  245554 8999999999998   999998888 


Q ss_pred             h-cchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhh
Q 038386          158 N-HSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAI  236 (523)
Q Consensus       158 ~-~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (523)
                      . +.+.+.+.+..+++.+.      +++.+|+.+.++.++++++++++||.+.++...+.+......+......  ....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~------~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  222 (490)
T PLN02500        151 THLLKEVERHTLLVLDSWK------ENSTFSAQDEAKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLN  222 (490)
T ss_pred             HHHHHHHHHHHHHHHHHhC------CCCCEEehHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhc
Confidence            5 45666666666666653      2557999999999999999999999887543333333333222221110  1111


Q ss_pred             ccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHH
Q 038386          237 MPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFI  316 (523)
Q Consensus       237 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~  316 (523)
                      +|..       .+++..++.+.+.+++.++++++++..+.++. .....|+++.+++.      ..++++++++++.+++
T Consensus       223 ~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~l~~ll~~------~~ls~~~i~~~~~~ll  288 (490)
T PLN02500        223 FPGT-------AYRKALKSRATILKFIERKMEERIEKLKEEDE-SVEEDDLLGWVLKH------SNLSTEQILDLILSLL  288 (490)
T ss_pred             CCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CCCcchHHHHHHhc------cCCCHHHHHHHHHHHH
Confidence            2321       12445567788888899999888765432221 11346899999863      2489999999999999


Q ss_pred             hhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhc----CCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcc
Q 038386          317 SHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQ----GQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHA  392 (523)
Q Consensus       317 ~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~----~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~  392 (523)
                      +||+|||+++++|++++|++||++|+|+++|++++++.    ++..++.+++++||||+|||+||||++|+++..  +|.
T Consensus       289 ~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~--~R~  366 (490)
T PLN02500        289 FAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL--HRK  366 (490)
T ss_pred             HhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe--eeE
Confidence            99999999999999999999999999999999998742    224689999999999999999999999999977  899


Q ss_pred             cccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchH
Q 038386          393 VTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLG  472 (523)
Q Consensus       393 ~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  472 (523)
                      +.+|++++||.|||||.|+++.+++||||++|+||++|+||||++.+......   ......+..|+|||.|+|.|+|++
T Consensus       367 ~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~---~~~~~~~~~~lpFG~G~R~CiG~~  443 (490)
T PLN02500        367 ALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSS---GSSSATTNNFMPFGGGPRLCAGSE  443 (490)
T ss_pred             eCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccc---cccCCCCCCCcCCCCCCCCCCcHH
Confidence            99999999999999999999999999999999999999999999653110000   000113468999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCceeEEEee
Q 038386          473 LAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLHARISP  520 (523)
Q Consensus       473 ~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (523)
                      ||++|+++++++|+++|+|++.+......  .. ...++++++|++++
T Consensus       444 ~A~~el~~~la~ll~~f~~~~~~~~~~~~--~~-~~~~~~~l~~~~~~  488 (490)
T PLN02500        444 LAKLEMAVFIHHLVLNFNWELAEADQAFA--FP-FVDFPKGLPIRVRR  488 (490)
T ss_pred             HHHHHHHHHHHHHHhccEEEEcCCCccee--cc-cccCCCCceEEEEe
Confidence            99999999999999999999876322221  22 23566899999875


No 17 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.3e-74  Score=579.08  Aligned_cols=456  Identities=20%  Similarity=0.272  Sum_probs=356.7

Q ss_pred             CCCCCCCCccceeeecccccCC----------------CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHH
Q 038386           36 QNLPPGPPRFHLLAHLLWHRKP----------------LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALI   99 (523)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~----------------~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~   99 (523)
                      .+.||||+++|++||++++...                ..+....+.+|+++||++|++++|+.++|+++||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            3569999999999999876320                123445678999999999999999999999999999999997


Q ss_pred             hCCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhh
Q 038386          100 NNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYC  179 (523)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~  179 (523)
                      ++ ..+..++..........+|   .++++. +|+.|+++|++++   +.|+..+++ .+.+.+.++++.+++.+.+...
T Consensus       121 ~~-~~~~~r~~~~~~~~~~~~g---~~l~~~-~g~~Wk~~Rk~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~~~~  191 (516)
T PLN02290        121 KY-NTVTGKSWLQQQGTKHFIG---RGLLMA-NGADWYHQRHIAA---PAFMGDRLK-GYAGHMVECTKQMLQSLQKAVE  191 (516)
T ss_pred             cC-CCCCCCcchhhhHHHHHhc---CCcccc-CchHHHHHHhhcc---cccCHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence            66 3455555321110001222   355544 8999999999999   999999999 9999999999999999987643


Q ss_pred             hcCCCeeehhHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhH
Q 038386          180 ECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSR  259 (523)
Q Consensus       180 ~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~  259 (523)
                      . +++.+|+.+++..++++++++++||.+++..  +........+............+|++.. ++....++..+..+.+
T Consensus       192 ~-~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~p~~~~~~~~~~~~~~  267 (516)
T PLN02290        192 S-GQTEVEIGEYMTRLTADIISRTEFDSSYEKG--KQIFHLLTVLQRLCAQATRHLCFPGSRF-FPSKYNREIKSLKGEV  267 (516)
T ss_pred             c-CCceEEhHHHHHHHHHHHHHHHHcCCccccc--hHHHHHHHHHHHHHHHhhhhhcCchhhh-CCChhHHHHHHHHHHH
Confidence            1 2358999999999999999999999987432  1222222222222111111123444322 1222234555677788


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCC--CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhC
Q 038386          260 EDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPS--DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKY  337 (523)
Q Consensus       260 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  337 (523)
                      .+++.+.|+++++..+.+.. +....|+++.+++...++  ++..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       268 ~~~~~~~i~~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~  346 (516)
T PLN02290        268 ERLLMEIIQSRRDCVEIGRS-SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASN  346 (516)
T ss_pred             HHHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            89999999988765432211 123578999999865321  223488999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccc
Q 038386          338 PKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADM  417 (523)
Q Consensus       338 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~  417 (523)
                      |++|+|+|+||+++++.  ..++.+++++||||+|||+||||++|+++..  +|.+.+|++++||.|||||.|.++.+++
T Consensus       347 P~vq~kl~~Ei~~v~~~--~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~--~R~~~~d~~i~g~~IP~Gt~V~~~~~~~  422 (516)
T PLN02290        347 PTWQDKVRAEVAEVCGG--ETPSVDHLSKLTLLNMVINESLRLYPPATLL--PRMAFEDIKLGDLHIPKGLSIWIPVLAI  422 (516)
T ss_pred             HHHHHHHHHHHHHHhCC--CCCCHHHHhcChHHHHHHHHHHHcCCCcccc--ceeecCCeeECCEEECCCCEEEecHHHh
Confidence            99999999999999876  4789999999999999999999999999865  9999999999999999999999999999


Q ss_pred             cCCCCCC-CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC
Q 038386          418 GRDPNVW-EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE  496 (523)
Q Consensus       418 ~~d~~~~-~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  496 (523)
                      ||||++| +||++|+||||++.+.            ..+..|+|||.|+|.|+|++||++|+++++++|+++|++++.++
T Consensus       423 ~rdp~~~~~dP~~F~PeRfl~~~~------------~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~  490 (516)
T PLN02290        423 HHSEELWGKDANEFNPDRFAGRPF------------APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN  490 (516)
T ss_pred             cCChhhhCCChhhcCccccCCCCC------------CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC
Confidence            9999999 8999999999995420            11257999999999999999999999999999999999998763


Q ss_pred             CCCcccccceEEeecCceeEEEeecC
Q 038386          497 DVDLSEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                      . ......++++.|+++++|++++|+
T Consensus       491 ~-~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        491 Y-RHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             c-ccCccceeeecCCCCCeEEEEeCC
Confidence            1 122234678899999999999986


No 18 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=6.3e-73  Score=562.23  Aligned_cols=470  Identities=23%  Similarity=0.390  Sum_probs=353.1

Q ss_pred             CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhc-CCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 038386           36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKY-GPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSI  114 (523)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~ky-G~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~  114 (523)
                      .+.||||+++|++||++++... .....+++++.++| |+||++++|+.++|+|+||+.+++++++++..|++|+.....
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~-~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMT-RPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccC-CCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3579999999999999987421 11124566777766 799999999999999999999999999888889998865433


Q ss_pred             cccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386          115 ADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY  194 (523)
Q Consensus       115 ~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~  194 (523)
                         ..++.+..++++..+|+.|+++|++++   +.|........+...++.++.++++.+.+...  .++++|+.+.+..
T Consensus       118 ---~~l~~~~~~i~~~~~G~~Wk~~Rk~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~  189 (534)
T PLN03018        118 ---ETIGDNYKSMGTSPYGEQFMKMKKVIT---TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ--RSETVDVRELSRV  189 (534)
T ss_pred             ---hhhccCCCceEecCCCHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCceeHHHHHHH
Confidence               334443345776667999999999998   77654444415556666788999999986543  3567999999999


Q ss_pred             HHHHHhhhhhccCCcch---------hHHHHHHHHHHHHHHHHh---hhhHHhhcc-ccchhhhHHHHHHHHHhHHhHHH
Q 038386          195 AIFYLLVKMCFGNNVEE---------QEIRELGCAQKKLFMIIN---KLKVFAIMP-DLGKILFRKRWKKFLGIIRSRED  261 (523)
Q Consensus       195 ~~~~v~~~~~fG~~~~~---------~~~~~~~~~~~~~~~~~~---~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~  261 (523)
                      ++++++++++||.+++.         .....+............   .....+.+| ++..+......++.......+.+
T Consensus       190 ~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  269 (534)
T PLN03018        190 YGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRS  269 (534)
T ss_pred             HHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHH
Confidence            99999999999998631         111112212222211111   111223333 33221111222344445667888


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHH
Q 038386          262 VFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQ  341 (523)
Q Consensus       262 ~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  341 (523)
                      ++.++++++++...... ......|+++.+++...++....++++++++++.++++||+|||+.+++|++++|+.||++|
T Consensus       270 ~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q  348 (534)
T PLN03018        270 YNNPIIDERVELWREKG-GKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEIL  348 (534)
T ss_pred             HHHHHHHHHHHHhhhcc-CCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHH
Confidence            88999988876542211 11124689999998653211124999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCC
Q 038386          342 AKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDP  421 (523)
Q Consensus       342 ~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  421 (523)
                      +++++||+++++.+ ..++.+++.++|||+|||+|+||++|+++.. .+|.+.+|+.++||.||||+.|+++.+++||||
T Consensus       349 ~kl~~Ei~~v~~~~-~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~-~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp  426 (534)
T PLN03018        349 RKALKELDEVVGKD-RLVQESDIPNLNYLKACCRETFRIHPSAHYV-PPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNP  426 (534)
T ss_pred             HHHHHHHHHHhCCC-CCCCHHHhcCCHHHHHHHHHHHhcCCCcccc-CCcccCCCeeECCEEECCCCEEEEChHHhcCCc
Confidence            99999999998764 6788999999999999999999999999987 689999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC--CCC
Q 038386          422 NVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE--DVD  499 (523)
Q Consensus       422 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~--~~~  499 (523)
                      ++|+||++|+||||++.+.+...   . .....+..|+|||.|+|.|+|++||.+|+++++++|+++|++++.+.  .++
T Consensus       427 ~~~~~p~~F~PeRfl~~~~~~~~---~-~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  502 (534)
T PLN03018        427 KIWKDPLVYEPERHLQGDGITKE---V-TLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLS  502 (534)
T ss_pred             ccCCCccccCCccCCCCCCcccc---c-cccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCC
Confidence            99999999999999965311000   0 00112468999999999999999999999999999999999998763  222


Q ss_pred             cccccceEEeecCceeEEEeecC
Q 038386          500 LSEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                      .....+ +...+.++.|++++|.
T Consensus       503 ~~~~~~-~~~~p~~~~v~~~~R~  524 (534)
T PLN03018        503 LEEDDA-SLLMAKPLLLSVEPRL  524 (534)
T ss_pred             cccccc-ceecCCCeEEEEEecc
Confidence            222223 3445689999999984


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.5e-73  Score=562.32  Aligned_cols=450  Identities=19%  Similarity=0.252  Sum_probs=343.7

Q ss_pred             CCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEE---EEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 038386           39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIIT---VRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA  115 (523)
Q Consensus        39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~---~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  115 (523)
                      .|||+++|++||++.+........+++.++.++||..++   .++|+.++++|+||+.+++|+.++...|.+++......
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~  112 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF  112 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH
Confidence            799999999999987754333455666666666887655   67899999999999999999988777777765433222


Q ss_pred             ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhc--chhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH
Q 038386          116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNH--SHLRGRVLEKLICELKREYCECRGDGVYVCEHFR  193 (523)
Q Consensus       116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~  193 (523)
                        .++|   .+++++ +|+.|+++|++++   ++|+...++ .+  ...+.+.++.+++.+.+.+.  +++.+|+.+.+.
T Consensus       113 --~~~g---~gl~~~-~g~~Wr~~Rk~l~---p~F~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~  180 (500)
T PLN02169        113 --DVLG---EGILTV-DFELWEDLRKSNH---ALFHNQDFI-ELSLSSNKSKLKEGLVPFLDNAAH--ENIIIDLQDVFM  180 (500)
T ss_pred             --Hhhc---Cccccc-CcHHHHHHHHHHH---HHhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHh--cCCeEeHHHHHH
Confidence              2233   466665 7999999999999   999998776 43  35666778888888876554  467899999999


Q ss_pred             HHHHHHhhhhhccCCcchhH----HHHHHHHHHHHHHHHhhhhHHhhccccc----hhhhHHHHHHHHHhHHhHHHHHHH
Q 038386          194 YAIFYLLVKMCFGNNVEEQE----IRELGCAQKKLFMIINKLKVFAIMPDLG----KILFRKRWKKFLGIIRSREDVFVG  265 (523)
Q Consensus       194 ~~~~~v~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~  265 (523)
                      .+++|++++++||.+.+...    ...+..........   .....+.|++.    .++.....++..++.+.+.+++.+
T Consensus       181 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (500)
T PLN02169        181 RFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEA---IYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAK  257 (500)
T ss_pred             HHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHH---HHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence            99999999999998763211    11233322222211   11112233221    111122346677888899999999


Q ss_pred             HHHHHHHHHhhhhhccCCccchHHHHHHhhCCCC--CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHH
Q 038386          266 LVRDRKKIKQENEERDIDSESYVDTLIELRLPSD--RKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAK  343 (523)
Q Consensus       266 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  343 (523)
                      +|+++++......+.+....|+++.+++....+.  ...++++++.+++.++++||+|||+++++|++++|+.||++|+|
T Consensus       258 ~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~k  337 (500)
T PLN02169        258 IISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAK  337 (500)
T ss_pred             HHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHH
Confidence            9998876532111111124689999998642211  23478999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCce-eCCEEeCCCCEEeeccccccCCCC
Q 038386          344 ILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVE-LGGYLVTKGISVNFLVADMGRDPN  422 (523)
Q Consensus       344 l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~-~~g~~ip~G~~v~~~~~~~~~d~~  422 (523)
                      +++||++++       +.+++.+||||+|||+||||++|++|..  .|.+.+|.. ++||.|||||.|.+++|++||||+
T Consensus       338 l~~Ei~~v~-------~~~dl~~L~Yl~avi~EtLRl~P~vp~~--~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~  408 (500)
T PLN02169        338 IRHEINTKF-------DNEDLEKLVYLHAALSESMRLYPPLPFN--HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRS  408 (500)
T ss_pred             HHHHHHhhC-------CHHHHhcCHHHHHHHHHHHhcCCCCCcC--ceecCCCCCccCCEEECCCCEEEEcHHHhhCCcc
Confidence            999998753       5689999999999999999999999988  677666655 599999999999999999999999


Q ss_pred             CC-CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcc
Q 038386          423 VW-EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLS  501 (523)
Q Consensus       423 ~~-~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~  501 (523)
                      +| +||++|+||||++.+.     .   .....+..|+|||+|+|.|+|++||++|+++++++||++|+|++.+.. +..
T Consensus       409 ~w~~dP~~F~PeRfl~~~~-----~---~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~-~~~  479 (500)
T PLN02169        409 VWGEDALDFKPERWISDNG-----G---LRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH-KIE  479 (500)
T ss_pred             ccCCChhhcCccccCCCCC-----C---ccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC-Ccc
Confidence            99 8999999999996531     0   001124789999999999999999999999999999999999987521 223


Q ss_pred             cccceEEeecCceeEEEeec
Q 038386          502 EKAEFTIEMKNPLHARISPR  521 (523)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~r  521 (523)
                      ...+.++.|++++++++++|
T Consensus       480 ~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        480 AIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             cccceEEecCCCEEEEEEeC
Confidence            34467889999999999988


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.6e-73  Score=566.34  Aligned_cols=455  Identities=28%  Similarity=0.479  Sum_probs=370.0

Q ss_pred             CCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccc
Q 038386           39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDL  118 (523)
Q Consensus        39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~  118 (523)
                      ||||+++|++||++++.+ .+++++++.+++++||+||++++++.++++|+||+.+++|+.++...+..++....+.  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~--~   77 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE--I   77 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH--H
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccc--c
Confidence            899999999999999854 5788999999999999999999999999999999999999987776776654332221  1


Q ss_pred             ee-eccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHH
Q 038386          119 IF-ANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIF  197 (523)
Q Consensus       119 ~~-~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~  197 (523)
                      .. ...+.++++. +|+.|+.+|+.+.   +.|+..... .+.+.+++.++.+++.+.+...  .++.+|+.++++.+++
T Consensus        78 ~~~~~~~~~l~~~-~~~~~~~~R~~~~---~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~  150 (463)
T PF00067_consen   78 FRGPFGGKGLFFS-DGERWRRQRRLLA---PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG--SSGPVDLFDWLRRFAL  150 (463)
T ss_dssp             HHHHHTTTSSTTS-SHHHHHHHHHHHH---HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT--SESEEEHHHHHHHHHH
T ss_pred             ccccccccccccc-ccccccccccccc---ccccccccc-cccccccccccccccccccccc--ccceeeeecccccccc
Confidence            11 1233455544 7799999999999   888887444 6889999999999999999876  3448999999999999


Q ss_pred             HHhhhhhccCCcc---hhHHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386          198 YLLVKMCFGNNVE---EQEIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK  272 (523)
Q Consensus       198 ~v~~~~~fG~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  272 (523)
                      ++++.++||.+++   +.....+.+....+......  ..+...+|++.. ++...++...++.+.+.+++.++++++++
T Consensus       151 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  229 (463)
T PF00067_consen  151 DVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKY-LPTPLFRRFKRARDRLRKYIKEIIEERRE  229 (463)
T ss_dssp             HHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT-SSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccceeeecccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence            9999999999864   44445566666666554322  234556664443 34555677777888999999999999988


Q ss_pred             HHhhhhhccCCccchHHHHHHhh-CCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Q 038386          273 IKQENEERDIDSESYVDTLIELR-LPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGV  351 (523)
Q Consensus       273 ~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  351 (523)
                      .....   .....|+++.++... ..+.+..+++++++.+++.+++||++||+.+++|++++|++||++|++|++||+++
T Consensus       230 ~~~~~---~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~  306 (463)
T PF00067_consen  230 ELDDG---DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSV  306 (463)
T ss_dssp             SHHSS---SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             ccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            76443   125689999999987 33222489999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCC
Q 038386          352 VEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFK  431 (523)
Q Consensus       352 ~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  431 (523)
                      .+++ ..++.+++++||||+|||+||||++|+++.. ++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+
T Consensus       307 ~~~~-~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~-~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~  384 (463)
T PF00067_consen  307 LGDG-REITFEDLSKLPYLDAVIKETLRLYPPVPFS-LPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFD  384 (463)
T ss_dssp             TTTS-SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTE-EEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--
T ss_pred             cccc-ccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc
Confidence            9544 6889999999999999999999999999955 5999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCCCcccccceEEee
Q 038386          432 PERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDVDLSEKAEFTIEM  510 (523)
Q Consensus       432 P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~~~~~~~~~~~~~  510 (523)
                      ||||++.+.         .....+..|+|||.|+|.|||++||++|+++++++||++|+|++.+ ...........+..+
T Consensus       385 P~R~~~~~~---------~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  455 (463)
T PF00067_consen  385 PERFLDERG---------ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLP  455 (463)
T ss_dssp             TTGGBTTTS---------TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEE
T ss_pred             ccccccccc---------ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEee
Confidence            999998852         0112357899999999999999999999999999999999999976 332222222245677


Q ss_pred             cCceeEEE
Q 038386          511 KNPLHARI  518 (523)
Q Consensus       511 ~~~~~~~~  518 (523)
                      +.+++|.|
T Consensus       456 ~~~~~~~~  463 (463)
T PF00067_consen  456 PKPLKVKF  463 (463)
T ss_dssp             ESSSEEEE
T ss_pred             CCCcEEeC
Confidence            78888875


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=9.2e-72  Score=549.73  Aligned_cols=432  Identities=21%  Similarity=0.322  Sum_probs=339.8

Q ss_pred             CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS  113 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~  113 (523)
                      +..+.||||+++|++||++.+.   +++..++++++++||++|++++|+.++++++||+.+++++.++...|..+.. ..
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~  103 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFL---KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QS  103 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHH---HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HH
Confidence            3346789999999999998773   3567799999999999999999999999999999999999877766644321 11


Q ss_pred             ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhh-cchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH
Q 038386          114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFN-HSHLRGRVLEKLICELKREYCECRGDGVYVCEHF  192 (523)
Q Consensus       114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~  192 (523)
                      ..  .++|.  .+++. .+|+.|+++|+++.   ++|++..++ . +.+.+.+.+.++++.|..      ++++|+.+.+
T Consensus       104 ~~--~~lg~--~~~~~-~~g~~w~~~R~~l~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~  168 (463)
T PLN02774        104 ML--DILGT--CNIAA-VHGSTHRYMRGSLL---SLISPTMIR-DHLLPKIDEFMRSHLSGWDG------LKTIDIQEKT  168 (463)
T ss_pred             HH--HHhCc--cchhh-cCCHHHHHHHHHHH---HhcCHHHHH-HHHHHHHHHHHHHHHHhhCC------CCCEEeeHHH
Confidence            11  33432  24544 48999999999998   899998887 5 678888877777776632      4679999999


Q ss_pred             HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386          193 RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK  272 (523)
Q Consensus       193 ~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  272 (523)
                      ..+++++++.++||.+.+.. ...+..   .+......   ...+|..   ++...+++..++.+.+.+++.+.|+++++
T Consensus       169 ~~~~~~~~~~~~~g~~~~~~-~~~~~~---~~~~~~~~---~~~~~~~---lp~~~~~~~~~~~~~~~~~~~~~i~~r~~  238 (463)
T PLN02774        169 KEMALLSALKQIAGTLSKPI-SEEFKT---EFFKLVLG---TLSLPID---LPGTNYRSGVQARKNIVRMLRQLIQERRA  238 (463)
T ss_pred             HHHHHHHHHHHHcCCCChHH-HHHHHH---HHHHHhcc---cccCCcC---CCChhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999875322 122222   22111110   0012211   11122345566778888888888888764


Q ss_pred             HHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Q 038386          273 IKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVV  352 (523)
Q Consensus       273 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  352 (523)
                      ..   .    ...|+++.+++...  ++..++++++++++.++++||+|||+++++|++++|++||++|+++++|++++.
T Consensus       239 ~~---~----~~~d~l~~ll~~~~--~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~  309 (463)
T PLN02774        239 SG---E----THTDMLGYLMRKEG--NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIR  309 (463)
T ss_pred             cC---C----CcccHHHHHHhCcc--CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            31   1    34699999997431  334589999999999999999999999999999999999999999999999998


Q ss_pred             hcC--CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCC
Q 038386          353 EQG--QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEF  430 (523)
Q Consensus       353 ~~~--~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  430 (523)
                      +..  +..++.++++++|||+|||+|+||++|+++..  +|.+.+|++++||.||||+.|+++.+.+||||++|+||++|
T Consensus       310 ~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~--~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F  387 (463)
T PLN02774        310 ERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV--LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTF  387 (463)
T ss_pred             hccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc--ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhcc
Confidence            642  35688999999999999999999999999866  89999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEee
Q 038386          431 KPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEM  510 (523)
Q Consensus       431 ~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  510 (523)
                      +||||++.+.           . ....|+|||+|+|.|||++||.+|++++++.|+++|++++.+.. +...  ..++.|
T Consensus       388 ~PeRfl~~~~-----------~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~-~~~~--~~~~~p  452 (463)
T PLN02774        388 NPWRWLDKSL-----------E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD-KLMK--FPRVEA  452 (463)
T ss_pred             CchhcCCCCc-----------C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC-cccc--CCCCCC
Confidence            9999996521           0 11359999999999999999999999999999999999998632 1211  124558


Q ss_pred             cCceeEEEee
Q 038386          511 KNPLHARISP  520 (523)
Q Consensus       511 ~~~~~~~~~~  520 (523)
                      +++++|++++
T Consensus       453 ~~g~~~~~~~  462 (463)
T PLN02774        453 PNGLHIRVSP  462 (463)
T ss_pred             CCCceEEeee
Confidence            8999999875


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.8e-71  Score=553.44  Aligned_cols=453  Identities=23%  Similarity=0.292  Sum_probs=342.4

Q ss_pred             CCCCCccceeeecccccCCCCCccHHHHHHHhhc---CCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 038386           39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKY---GPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA  115 (523)
Q Consensus        39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~ky---G~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  115 (523)
                      +|||+++|++||++.+..   + +..+.+|.++|   |++|++++|+.++++++||+.+++|+.++...|.+++.+....
T Consensus        32 ~pgp~~~p~~G~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  107 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK---N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM  107 (516)
T ss_pred             cCCCCCCCeecchHHHHh---c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence            799999999999876643   2 34566777777   8999999999999999999999999977655666554321111


Q ss_pred             ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhh-HHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386          116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLR-GRVLEKLICELKREYCECRGDGVYVCEHFRY  194 (523)
Q Consensus       116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~  194 (523)
                       ..+++   .+++. .+|+.|+++|++++   +.|+..+++ .+.+.+ .+.++.+++.+.+...  .++++|+.++++.
T Consensus       108 -~~~~g---~~l~~-~~g~~w~~~Rr~l~---~~fs~~~l~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~  176 (516)
T PLN03195        108 -EVLLG---DGIFN-VDGELWRKQRKTAS---FEFASKNLR-DFSTVVFREYSLKLSSILSQASF--ANQVVDMQDLFMR  176 (516)
T ss_pred             -HHHhc---Ceeec-cCcHHHHHHHHhcc---hhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHh--cCCeEcHHHHHHH
Confidence             01222   35544 58999999999999   999999999 888875 6667788887765433  3678999999999


Q ss_pred             HHHHHhhhhhccCCcchhH----HHHHHHHHHHHHHHHhhhhHHhhcccc--chhhhHHHHHHHHHhHHhHHHHHHHHHH
Q 038386          195 AIFYLLVKMCFGNNVEEQE----IRELGCAQKKLFMIINKLKVFAIMPDL--GKILFRKRWKKFLGIIRSREDVFVGLVR  268 (523)
Q Consensus       195 ~~~~v~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~P~l--~~~~~~~~~~~~~~~~~~~~~~~~~~i~  268 (523)
                      +++++++.++||.+++...    ...+...........   ......|.+  .++......+...+..+.+.+++.++++
T Consensus       177 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  253 (516)
T PLN03195        177 MTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIV---TLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIR  253 (516)
T ss_pred             HHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHH---HHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999874211    112322222221111   001111211  1111111223445677778888889998


Q ss_pred             HHHHHHhhhh-hccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386          269 DRKKIKQENE-ERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE  347 (523)
Q Consensus       269 ~~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  347 (523)
                      ++++...... ..+....|+++.+++...+ .++.+++++++++++++++||+|||+++++|++++|++||++|+||++|
T Consensus       254 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~E  332 (516)
T PLN03195        254 RRKAEMDEARKSGKKVKHDILSRFIELGED-PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSE  332 (516)
T ss_pred             HHHHHHhccccccccccccHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            8876543211 1111356899999986532 3456999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcC-------------------CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee-CCEEeCCC
Q 038386          348 INGVVEQG-------------------QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL-GGYLVTKG  407 (523)
Q Consensus       348 i~~~~~~~-------------------~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G  407 (523)
                      ++++.+..                   +..++.+++.+||||+|||+||||++|++|..  +|.+.+|..+ +|+.||||
T Consensus       333 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~--~r~~~~d~~~~~G~~IpkG  410 (516)
T PLN03195        333 LKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD--PKGILEDDVLPDGTKVKAG  410 (516)
T ss_pred             HHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch--hhhhccCcCcCCCcEECCC
Confidence            99876431                   24578999999999999999999999999988  7777777665 99999999


Q ss_pred             CEEeeccccccCCCCCC-CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHh
Q 038386          408 ISVNFLVADMGRDPNVW-EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLI  486 (523)
Q Consensus       408 ~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll  486 (523)
                      |.|.++.+++||||++| +||++|+||||++.+.         .....+..|+|||+|+|.|+|++||++|++++++.|+
T Consensus       411 t~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~---------~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll  481 (516)
T PLN03195        411 GMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV---------FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLC  481 (516)
T ss_pred             CEEEEehHhhccChhhhccChhhcCCcccCCCCC---------cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            99999999999999999 9999999999996421         0011236799999999999999999999999999999


Q ss_pred             hhcEeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386          487 WKFEWNKADEDVDLSEKAEFTIEMKNPLHARISPRV  522 (523)
Q Consensus       487 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (523)
                      ++|++++.+.. +.......++.|+.+++|++++|+
T Consensus       482 ~~f~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        482 RFFKFQLVPGH-PVKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HhceeEecCCC-cceeeeeeEEecCCCEEEEEEeCC
Confidence            99999987521 223333456789999999999985


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.4e-70  Score=550.80  Aligned_cols=437  Identities=21%  Similarity=0.316  Sum_probs=338.6

Q ss_pred             CCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchh
Q 038386           57 PLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTW  136 (523)
Q Consensus        57 ~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w  136 (523)
                      ..++++..+.+++++||+||++++|+.++++|+||+.+++|+.++...|.+++......  .+.+   .+++. .+|+.|
T Consensus       149 ~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~--~~~g---~~l~~-~dge~w  222 (633)
T PLN02738        149 RGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE--FVMG---KGLIP-ADGEIW  222 (633)
T ss_pred             cCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh--hccC---Cceec-CCcHHH
Confidence            35678999999999999999999999999999999999999987777777664432111  1122   35554 489999


Q ss_pred             HHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcch-----
Q 038386          137 RVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEE-----  211 (523)
Q Consensus       137 ~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~-----  211 (523)
                      +++|+.+.   ++|+...++ .+.+.+.+.++++++.+.+...  +++++|+.+.+..+++|+++.++||.+++.     
T Consensus       223 r~rRr~l~---p~Fs~~~v~-~l~~~i~~~v~~L~~~L~~~~~--~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~  296 (633)
T PLN02738        223 RVRRRAIV---PALHQKYVA-AMISLFGQASDRLCQKLDAAAS--DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT  296 (633)
T ss_pred             HHHHHhcc---HhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccch
Confidence            99999999   999999999 9999999999999999987654  477999999999999999999999998742     


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhh-----h-ccCCcc
Q 038386          212 QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENE-----E-RDIDSE  285 (523)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~-~~~~~~  285 (523)
                      +..+.+...................+|.+..+  ....++..+..+.+.++..++++.+++..++..     . ......
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  374 (633)
T PLN02738        297 GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP  374 (633)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc
Confidence            12222222222211100000000112222211  111234444555666666666665543321110     0 012346


Q ss_pred             chHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCccccc
Q 038386          286 SYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLV  365 (523)
Q Consensus       286 d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  365 (523)
                      |+++.|++..     ..++++++.++++.+++||+|||+.+++|++++|++||++|+|||+|+++++++  ..++.++++
T Consensus       375 dil~~Ll~~~-----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~--~~~t~edL~  447 (633)
T PLN02738        375 SILHFLLASG-----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD--RFPTIEDMK  447 (633)
T ss_pred             hHHHHHHHcC-----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC--CCCCHHHHc
Confidence            8999998642     358999999999999999999999999999999999999999999999999874  678999999


Q ss_pred             CChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCC
Q 038386          366 KMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGK  445 (523)
Q Consensus       366 ~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~  445 (523)
                      +||||+|||+|+|||+|+++..  +|.+.+|++++||.|||||.|.++.+.+||||++||||++|+||||+..+... ..
T Consensus       448 kLPYL~AVIkEtLRL~p~~p~~--~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~-~~  524 (633)
T PLN02738        448 KLKYTTRVINESLRLYPQPPVL--IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP-NE  524 (633)
T ss_pred             cCHHHHHHHHHHHhcCCCcccc--ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc-cc
Confidence            9999999999999999999987  79999999999999999999999999999999999999999999998542100 00


Q ss_pred             CCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCceeEEEeecCC
Q 038386          446 NNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLHARISPRVN  523 (523)
Q Consensus       446 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  523 (523)
                            ......|+|||.|+|.|+|++||++|+++++++|+++|+|++.+...++....++++.++++++|++++|.+
T Consensus       525 ------~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        525 ------TNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             ------cCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCC
Confidence                  112368999999999999999999999999999999999998863323333346788899999999999963


No 24 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.7e-70  Score=548.03  Aligned_cols=446  Identities=18%  Similarity=0.288  Sum_probs=350.2

Q ss_pred             CcCCCCCCCCCCCccceeeecccccC--CCCCccHHHHHHHhhcCC--eEEEEeCCEeEEEecCHHHHHHHHHhCCcccc
Q 038386           31 SEISTQNLPPGPPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGP--IITVRMGSEPSIYICNNTLAHQALINNGTVFA  106 (523)
Q Consensus        31 ~~~~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~--i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~  106 (523)
                      .+....+.||||+++|++|+++++..  ...++++++.+++++||+  +|++++++.+.|+++||+.+++|+.++ +.|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Cccc
Confidence            34455688999999999999987753  235688899999999997  799999999999999999999999654 4555


Q ss_pred             cCCCCCcccccceeeccccceeeCcCCchhHHHhhhhcccccccc-ccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCe
Q 038386          107 DRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLH-SSSIKFNHSHLRGRVLEKLICELKREYCECRGDG  185 (523)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~-~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  185 (523)
                      ++.... ..  .++|.  ..+. ..+|+.|+++|+.+.   +.|+ ++.++ .+.+.+.+.+.++++.+..      ++.
T Consensus       115 ~~~~~~-~~--~~~g~--~~~~-~~~g~~w~~~R~~~~---~~f~~~~~l~-~~~~~i~~~v~~~~~~~~~------~~~  178 (490)
T PLN02302        115 PGWPES-TV--ELIGR--KSFV-GITGEEHKRLRRLTA---APVNGPEALS-TYIPYIEENVKSCLEKWSK------MGE  178 (490)
T ss_pred             cCCchh-HH--HHhcc--cccc-ccCcHHHHHHHHHHH---hccCCHHHHH-HHHHHHHHHHHHHHHHhcC------CCC
Confidence            432211 11  22332  2333 348999999999999   8884 67888 8999999999999988743      346


Q ss_pred             eehhHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHH
Q 038386          186 VYVCEHFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVG  265 (523)
Q Consensus       186 vd~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~  265 (523)
                      +|+.+.++.++++++++++||.+++... +.+......+.....  .....+|.       ..+++..+..+.+.+++.+
T Consensus       179 v~~~~~~~~~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~p~-------~~~~~~~~~~~~l~~~~~~  248 (490)
T PLN02302        179 IEFLTELRKLTFKIIMYIFLSSESELVM-EALEREYTTLNYGVR--AMAINLPG-------FAYHRALKARKKLVALFQS  248 (490)
T ss_pred             EehHHHHHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHHHhh--hCCcCCCc-------hhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998874321 222221111111100  00001121       1223444566788888899


Q ss_pred             HHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHH
Q 038386          266 LVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKIL  345 (523)
Q Consensus       266 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  345 (523)
                      .|+++++....+.  .....|+++.+++...+ ++..+++++++.++.++++||+|||+.+++|++++|++||++|++++
T Consensus       249 ~i~~~~~~~~~~~--~~~~~d~l~~ll~~~~~-~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~  325 (490)
T PLN02302        249 IVDERRNSRKQNI--SPRKKDMLDLLLDAEDE-NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAK  325 (490)
T ss_pred             HHHHHHHhhhccC--CCCcCCHHHHHHhhhcc-CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            9988876543211  12457999999987543 34468999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcC---CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCC
Q 038386          346 DEINGVVEQG---QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPN  422 (523)
Q Consensus       346 ~Ei~~~~~~~---~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~  422 (523)
                      +|+++++++.   ...++.++++++|||+|||+|+||++|+++..  +|.+.+|+.++||.||||+.|.++.+++||||+
T Consensus       326 ~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~  403 (490)
T PLN02302        326 AEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV--FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPE  403 (490)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc--hhcccCCEeECCEEECCCCEEEeeHHHhcCCcc
Confidence            9999988642   12378899999999999999999999999877  899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCccc
Q 038386          423 VWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSE  502 (523)
Q Consensus       423 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~  502 (523)
                      +|+||++|+||||++..             ..+..++|||.|+|.|+|++||.+|+++++++|+++|++++.++..++. 
T Consensus       404 ~~~dP~~F~PeR~~~~~-------------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-  469 (490)
T PLN02302        404 VYPNPKEFDPSRWDNYT-------------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVM-  469 (490)
T ss_pred             cCCCccccChhhcCCCC-------------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcce-
Confidence            99999999999999652             1236799999999999999999999999999999999999886332322 


Q ss_pred             ccceEEeecCceeEEEeecCC
Q 038386          503 KAEFTIEMKNPLHARISPRVN  523 (523)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~r~~  523 (523)
                       ....+.|.+++.+++++|.+
T Consensus       470 -~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        470 -YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             -eCCCCCCCCCceEEEEeccC
Confidence             22347889999999999864


No 25 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=7.2e-71  Score=542.85  Aligned_cols=434  Identities=19%  Similarity=0.291  Sum_probs=347.1

Q ss_pred             ccCcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccC
Q 038386           29 SSSEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADR  108 (523)
Q Consensus        29 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~  108 (523)
                      .....++.+.||||+++|++||++++.  .++++.++.+++++||++|++++++.++|+++||+.+++++.++.+.|.  
T Consensus        27 ~~~~~~~~~~Ppgp~~~P~iG~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--  102 (463)
T PLN02196         27 RRSSSTKLPLPPGTMGWPYVGETFQLY--SQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--  102 (463)
T ss_pred             ccCCCCCCCCCCCCCCCCccchHHHHH--hcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--
Confidence            334445578899999999999998763  4578899999999999999999999999999999999999987766662  


Q ss_pred             CCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeeh
Q 038386          109 PKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYV  188 (523)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~  188 (523)
                      +...... ...+|  ..++++ .+|+.|+++|+++.   +.|++++++ .+.+.+.+.+.++++.|.       ++.+|+
T Consensus       103 ~~~~~~~-~~~~g--~~~l~~-~~g~~w~~~Rk~l~---~~f~~~~l~-~~~~~i~~~~~~~~~~~~-------~~~v~~  167 (463)
T PLN02196        103 PTFPASK-ERMLG--KQAIFF-HQGDYHAKLRKLVL---RAFMPDAIR-NMVPDIESIAQESLNSWE-------GTQINT  167 (463)
T ss_pred             ccCchHH-HHHcC--cccccc-cCcHHHHHHHHHHH---HhcChHHHH-HHHHHHHHHHHHHHHcCC-------CCeEEe
Confidence            3322111 02233  234544 48999999999999   999999999 999999999998888762       457899


Q ss_pred             hHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHH
Q 038386          189 CEHFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVR  268 (523)
Q Consensus       189 ~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  268 (523)
                      .++++.+++++++.++||.+.... .+.+......+..      ....+|+..   +....++..++.+.+.+++.+.|+
T Consensus       168 ~~~~~~~~~~v~~~~~fG~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~---p~~~~~~~~~a~~~~~~~~~~~i~  237 (463)
T PLN02196        168 YQEMKTYTFNVALLSIFGKDEVLY-REDLKRCYYILEK------GYNSMPINL---PGTLFHKSMKARKELAQILAKILS  237 (463)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCchH-HHHHHHHHHHHhc------chhcccccC---CCccchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999875321 1122221111111      011233211   111124555677788888888888


Q ss_pred             HHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHH
Q 038386          269 DRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEI  348 (523)
Q Consensus       269 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  348 (523)
                      ++++..   .    +..|+++.+++.     +..++++++.++++++++||+|||+.+++|++++|++||++|+++++|+
T Consensus       238 ~~~~~~---~----~~~d~l~~ll~~-----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei  305 (463)
T PLN02196        238 KRRQNG---S----SHNDLLGSFMGD-----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQ  305 (463)
T ss_pred             HHhhcC---C----CcccHHHHHHhc-----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            775431   1    346899988852     3458999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcC--CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCC
Q 038386          349 NGVVEQG--QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWED  426 (523)
Q Consensus       349 ~~~~~~~--~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  426 (523)
                      +++.+..  +..++.++++++|||+|||+|+||++|+++..  .|.+.+|+.++||.||||+.|+++.+++||||++|+|
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~--~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~d  383 (463)
T PLN02196        306 MAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT--FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSD  383 (463)
T ss_pred             HHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc--ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCC
Confidence            9987642  35688999999999999999999999999987  7999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccce
Q 038386          427 PLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEF  506 (523)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  506 (523)
                      |++|+||||++..              .+..++|||.|+|.|+|+++|++|+++++++|+++|+|++.+.+.+.  ....
T Consensus       384 P~~F~PeRfl~~~--------------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~  447 (463)
T PLN02196        384 PGKFDPSRFEVAP--------------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGI--QYGP  447 (463)
T ss_pred             cCccChhhhcCCC--------------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCce--EEcc
Confidence            9999999999642              13689999999999999999999999999999999999988643333  3344


Q ss_pred             EEeecCceeEEEeec
Q 038386          507 TIEMKNPLHARISPR  521 (523)
Q Consensus       507 ~~~~~~~~~~~~~~r  521 (523)
                      +..|+++++|+++.+
T Consensus       448 ~~~p~~~~~~~~~~~  462 (463)
T PLN02196        448 FALPQNGLPIALSRK  462 (463)
T ss_pred             cccCCCCceEEEecC
Confidence            567999999998754


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.4e-70  Score=540.16  Aligned_cols=441  Identities=19%  Similarity=0.279  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCccceeeecccccCC--CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKP--LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS  111 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~  111 (523)
                      ++.+.||||.++|++||++.+...  ..+++.++.+++++||+||++++|+.++|+++||+++++++.+++..|..+.. 
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~-   82 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP-   82 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc-
Confidence            445679999999999999887431  24688999999999999999999999999999999999999888877765421 


Q ss_pred             CcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhh-cchhhHHHHHHHHHHHHHHhhhcCCCeeehhH
Q 038386          112 TSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFN-HSHLRGRVLEKLICELKREYCECRGDGVYVCE  190 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~  190 (523)
                      ..+.  .++|.  .++++. +|+.|+++|+++.   +.|+...+. . +.+.+.+.+.++++.+.      +++.+|+.+
T Consensus        83 ~~~~--~l~g~--~~~~~~-~g~~wr~~r~~~~---~~~~~~~l~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  147 (452)
T PLN03141         83 KSLT--ELMGK--SSILLI-NGSLQRRVHGLIG---AFLKSPHLK-AQITRDMERYVSESLDSWR------DDPPVLVQD  147 (452)
T ss_pred             hhHH--HHhCc--cccccc-CcHHHHHHHHHHH---HhcCcHHHH-HHHHHHHHHHHHHHHHhcc------CCCCEEhHH
Confidence            1121  34442  245544 8999999999998   888877676 4 34455555555554432      256899999


Q ss_pred             HHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386          191 HFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR  270 (523)
Q Consensus       191 ~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  270 (523)
                      .+..++++++++++||.+.+.+ ...+......+.....      .+|...   +...+++..++.+.+.+++.++|+++
T Consensus       148 ~~~~~~~~vi~~~~~G~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~---p~~~~~~~~~~~~~l~~~~~~~i~~~  217 (452)
T PLN03141        148 ETKKIAFEVLVKALISLEPGEE-MEFLKKEFQEFIKGLM------SLPIKL---PGTRLYRSLQAKKRMVKLVKKIIEEK  217 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCchHH-HHHHHHHHHHHhhhHH------hCccCC---CchHhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876432 2333333333222111      123211   11122344567888899999999988


Q ss_pred             HHHHhhhhhcc-CCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHH
Q 038386          271 KKIKQENEERD-IDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEIN  349 (523)
Q Consensus       271 ~~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  349 (523)
                      ++....+.+.. ....|+++.+++..    +..+++++++.+++++++||+|||+.+++|++++|+.||++|+++++|++
T Consensus       218 ~~~~~~~~~~~~~~~~d~l~~ll~~~----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~  293 (452)
T PLN03141        218 RRAMKNKEEDETGIPKDVVDVLLRDG----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENM  293 (452)
T ss_pred             HHHHhccCccccCChhhHHHHHHhcC----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence            76643221100 12468999998753    34589999999999999999999999999999999999999999999999


Q ss_pred             Hhhhc---CCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCC
Q 038386          350 GVVEQ---GQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWED  426 (523)
Q Consensus       350 ~~~~~---~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  426 (523)
                      ++.+.   .+..++.+++.++|||+|||+|++|++|+++.+  +|.+.+|++++||.||||+.|+++.+++|+||++|+|
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~d  371 (452)
T PLN03141        294 KLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV--MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDN  371 (452)
T ss_pred             HHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc--ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCC
Confidence            87642   234578899999999999999999999999855  9999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccce
Q 038386          427 PLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEF  506 (523)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  506 (523)
                      |++|+||||++.+.             .+..|+|||+|+|.|+|++||.+|+++++++|+++|++++.+..  ..  ...
T Consensus       372 P~~F~PeRfl~~~~-------------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~--~~--~~~  434 (452)
T PLN03141        372 PYQFNPWRWQEKDM-------------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT--IV--NFP  434 (452)
T ss_pred             ccccCcccccCCCC-------------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC--ee--ecc
Confidence            99999999996520             13689999999999999999999999999999999999987632  11  124


Q ss_pred             EEeecCceeEEEeecCC
Q 038386          507 TIEMKNPLHARISPRVN  523 (523)
Q Consensus       507 ~~~~~~~~~~~~~~r~~  523 (523)
                      ++.|+.++.|++++|++
T Consensus       435 ~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        435 TVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             cccCCCCceEEEEeCCC
Confidence            77999999999999974


No 27 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=9e-69  Score=531.12  Aligned_cols=455  Identities=21%  Similarity=0.266  Sum_probs=355.5

Q ss_pred             CCCCCccceeeecccccC--CCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc
Q 038386           39 PPGPPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD  116 (523)
Q Consensus        39 ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~  116 (523)
                      =-|-.|||++|+.+.+..  ..+.++..+.+|+++||++|++++|+.+.++++||+++++|+.+.+..|.+++...... 
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~-   92 (489)
T PLN02936         14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE-   92 (489)
T ss_pred             CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH-
Confidence            467789999999988765  45678999999999999999999999999999999999999977667887765432111 


Q ss_pred             cceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcch-hhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386          117 DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSH-LRGRVLEKLICELKREYCECRGDGVYVCEHFRYA  195 (523)
Q Consensus       117 ~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~  195 (523)
                       .+++   .++++ .+|+.|+++|++++   +.|+..++. .+.+ .+.+.++.+++.+.+...  +++++|+.++++.+
T Consensus        93 -~~~~---~~i~~-~~g~~wk~~Rk~l~---~~f~~~~l~-~~~~~~~~~~~~~l~~~l~~~~~--~g~~vd~~~~~~~~  161 (489)
T PLN02936         93 -FLFG---SGFAI-AEGELWTARRRAVV---PSLHRRYLS-VMVDRVFCKCAERLVEKLEPVAL--SGEAVNMEAKFSQL  161 (489)
T ss_pred             -HHhc---Ccccc-CCchHHHHHHHhhc---CccCHHHHH-HHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHH
Confidence             2222   35544 48999999999999   999988888 6654 788899999999987654  46789999999999


Q ss_pred             HHHHhhhhhccCCcchhH-HHHHHHHHHHHHHHHhhhhHHhhccccchhh---hHHHHHHHHHhHHhHHHHHHHHHHHHH
Q 038386          196 IFYLLVKMCFGNNVEEQE-IRELGCAQKKLFMIINKLKVFAIMPDLGKIL---FRKRWKKFLGIIRSREDVFVGLVRDRK  271 (523)
Q Consensus       196 ~~~v~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~  271 (523)
                      ++++++.++||.+++... ...+............ ......+|++...+   ....+++..++.+.+.+++.+.+++++
T Consensus       162 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~  240 (489)
T PLN02936        162 TLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCK  240 (489)
T ss_pred             HHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999985211 1122222222222111 11122333321100   111245566778888888888888777


Q ss_pred             HHHhhhhh-------ccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHH
Q 038386          272 KIKQENEE-------RDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKI  344 (523)
Q Consensus       272 ~~~~~~~~-------~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  344 (523)
                      +...+...       .+....|+++.|++..     ..++++++.++++++++||+|||+++++|++++|++||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl  315 (489)
T PLN02936        241 EIVEAEGEVIEGEEYVNDSDPSVLRFLLASR-----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKA  315 (489)
T ss_pred             HHHhhcccccccccccccCchHHHHHHHhcc-----ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            65432111       0113468999998643     24899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC
Q 038386          345 LDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW  424 (523)
Q Consensus       345 ~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~  424 (523)
                      |+|++++++.  ..++.+++++||||+|||+||||++|+++.. .+|.+.+|+.++||.||||+.|.++.+++||||++|
T Consensus       316 ~~Ei~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~-~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~  392 (489)
T PLN02936        316 QEELDRVLQG--RPPTYEDIKELKYLTRCINESMRLYPHPPVL-IRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVW  392 (489)
T ss_pred             HHHHHHHhcC--CCCCHHHHhhCHHHHHHHHHhhhcCCCcccc-cceeccCccccCCeEECCCCEEEecHHhccCChhhC
Confidence            9999999875  4578899999999999999999999999988 777778888889999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCccccc
Q 038386          425 EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKA  504 (523)
Q Consensus       425 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  504 (523)
                      +||++|+||||+..+.....       ...+..|+|||.|+|.|+|++||++|+++++++|+++|++++.+.+ +.....
T Consensus       393 ~dP~~F~PeRwl~~~~~~~~-------~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~-~~~~~~  464 (489)
T PLN02936        393 ERAEEFVPERFDLDGPVPNE-------TNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ-DIVMTT  464 (489)
T ss_pred             CCccccCccccCCCCCCccc-------cCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC-ccceec
Confidence            99999999999965311000       1123579999999999999999999999999999999999988622 222223


Q ss_pred             ceEEeecCceeEEEeecC
Q 038386          505 EFTIEMKNPLHARISPRV  522 (523)
Q Consensus       505 ~~~~~~~~~~~~~~~~r~  522 (523)
                      ++++.++++++|++++|.
T Consensus       465 ~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        465 GATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             ceEEeeCCCeEEEEEeee
Confidence            567789999999999985


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.9e-68  Score=523.43  Aligned_cols=439  Identities=20%  Similarity=0.271  Sum_probs=339.9

Q ss_pred             CCCCCCCCCCccceeeecccccCC--CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386           34 STQNLPPGPPRFHLLAHLLWHRKP--LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS  111 (523)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~  111 (523)
                      .+.+.||||.++|++||++++...  ..++..++.+++++||++|++++++.++|+|+||+.+++++.++...|.++...
T Consensus        27 ~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~  106 (472)
T PLN02987         27 RRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPG  106 (472)
T ss_pred             CCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcH
Confidence            334679999999999999887421  246788899999999999999999999999999999999998887778654321


Q ss_pred             CcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH
Q 038386          112 TSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH  191 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~  191 (523)
                       ...  .++|.  .+++++ +|+.|+++|+++.   +.++...++ .+.   ..++.++++...+.    ..+++|+.+.
T Consensus       107 -~~~--~~lg~--~~l~~~-~g~~wr~~R~~~~---~f~~~~~~~-~~~---~~~~~~~~~~~~~~----~~~~v~~~~~  169 (472)
T PLN02987        107 -SIS--NLLGK--HSLLLM-KGNLHKKMHSLTM---SFANSSIIK-DHL---LLDIDRLIRFNLDS----WSSRVLLMEE  169 (472)
T ss_pred             -HHH--HHhCc--cccccc-CcHHHHHHHHHHH---HhcChHHHH-HHH---HHHHHHHHHHHHHh----hccceehHHH
Confidence             111  44442  356666 8999999999987   544444444 322   22333443332221    1246899999


Q ss_pred             HHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHH
Q 038386          192 FRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRK  271 (523)
Q Consensus       192 ~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  271 (523)
                      ++.++++++++++||.+.+... +.+..........    .....+|++.     ..+++..+..+++.+++.++|++++
T Consensus       170 ~~~~t~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~----~~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        170 AKKITFELTVKQLMSFDPGEWT-ESLRKEYVLVIEG----FFSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHhh----hhcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998764221 2222222111111    1122345542     2356677888999999999999987


Q ss_pred             HHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Q 038386          272 KIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGV  351 (523)
Q Consensus       272 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  351 (523)
                      +....+.   ....|+++.+++..     ..++++++++++.++++||+|||+.+++|++++|++||++|+++++|++++
T Consensus       240 ~~~~~~~---~~~~d~l~~ll~~~-----~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~  311 (472)
T PLN02987        240 KEEEEGA---EKKKDMLAALLASD-----DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKI  311 (472)
T ss_pred             hhhhccC---cccccHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            6542211   13468999999753     258999999999999999999999999999999999999999999999998


Q ss_pred             hhcC--CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCC
Q 038386          352 VEQG--QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLE  429 (523)
Q Consensus       352 ~~~~--~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  429 (523)
                      .+..  +..++.+++.++|||+||++|+||++|+++..  +|.+.+|++++||.||||+.|+++.+.+|+||++|+||++
T Consensus       312 ~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~--~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~  389 (472)
T PLN02987        312 RAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI--FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDART  389 (472)
T ss_pred             HcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc--cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccc
Confidence            7532  24578899999999999999999999999855  8999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEe
Q 038386          430 FKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIE  509 (523)
Q Consensus       430 F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  509 (523)
                      |+||||++.+..          ...+..++|||.|+|.|||++||.+|++++++.|+++|++++.+.. +...  ..++.
T Consensus       390 F~PeRfl~~~~~----------~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~  456 (472)
T PLN02987        390 FNPWRWQSNSGT----------TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-KLVF--FPTTR  456 (472)
T ss_pred             cCcccCCCCCCC----------CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-ceee--ccccc
Confidence            999999965310          0123679999999999999999999999999999999999987622 2222  34788


Q ss_pred             ecCceeEEEeecC
Q 038386          510 MKNPLHARISPRV  522 (523)
Q Consensus       510 ~~~~~~~~~~~r~  522 (523)
                      |.+++.+++++|+
T Consensus       457 p~~~~~~~~~~r~  469 (472)
T PLN02987        457 TQKRYPINVKRRD  469 (472)
T ss_pred             CCCCceEEEEecc
Confidence            9999999999985


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.9e-69  Score=480.93  Aligned_cols=447  Identities=21%  Similarity=0.270  Sum_probs=359.6

Q ss_pred             CCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC-cc
Q 038386           37 NLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST-SI  114 (523)
Q Consensus        37 ~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~  114 (523)
                      +.||.-++ +||+|++..|   ++++.+++++.++|||+||++.++|+.+.++.+|+....++......++....+. ..
T Consensus        31 ~~PPli~gwiP~lG~a~~f---gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF---GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHh---ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            56888775 6999999999   7899999999999999999999999999999999999999965544555443332 22


Q ss_pred             cccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHH-HHHHhhhcCCCeeehhHHHH
Q 038386          115 ADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICE-LKREYCECRGDGVYVCEHFR  193 (523)
Q Consensus       115 ~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~vd~~~~~~  193 (523)
                      .  ++||.   +++....+....++.+++.   ..+...+++ .+.+.|.+++.+.+.. +.+     +|..-.+..++.
T Consensus       108 ~--~vFg~---~v~~d~~~~~~~e~~~~~k---~~L~~~~lk-~~~e~m~~el~~~f~~~~~~-----s~~~d~l~~~~~  173 (486)
T KOG0684|consen  108 T--PVFGK---GVVYDVPNHVMMEQKKFFK---SALGGVALK-SLVELMLEELHAYFETSLGE-----SGETDGLYTFCR  173 (486)
T ss_pred             h--hhcCC---CccccCCCchHHHHHHHHH---HHhchhhHH-HHHHHHHHHHHHHHhccccc-----ccchhHhhhhhH
Confidence            2  55653   5555557788888989998   899999999 9999999999888877 333     366667888888


Q ss_pred             HHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHH
Q 038386          194 YAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKI  273 (523)
Q Consensus       194 ~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  273 (523)
                      .+++.+.-.++||.....- .+.......++...+.  .+...||..   ++....++..++.+.+.+.+.+.|.++++.
T Consensus       174 ~ii~tAs~~ll~~e~r~~~-d~~~a~l~~dLd~~F~--~~d~~FP~~---LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s  247 (486)
T KOG0684|consen  174 LIIFTASRLLLGGEVRDQL-DADVAKLYHDLDQGFQ--PFDFLFPYN---LPIPLLRRRDRARKKISKIFSKIILDRRAS  247 (486)
T ss_pred             HHhhhhHHHhhhhhhhhhh-cchHHHHHHHHhcccc--chHhhcccC---CCcchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence            8888888888888655321 1222233333333222  233356741   223334555688889999999999999887


Q ss_pred             HhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Q 038386          274 KQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVE  353 (523)
Q Consensus       274 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  353 (523)
                      .+.      ...|.++.+++.. . ++.+.+++|++..++.++|||+.||+++.+|++++|++|||+++.+++|+.++++
T Consensus       248 ~s~------~~~dmlq~l~~~y-~-dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG  319 (486)
T KOG0684|consen  248 ISK------WDNDMLQSLMEKY-K-DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLG  319 (486)
T ss_pred             ccc------ccHHHHHHHHHHh-h-cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhh
Confidence            522      3358899888833 2 5677999999999999999999999999999999999999999999999999998


Q ss_pred             cCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCC----EEeCCCCEEeeccccccCCCCCCCCCCC
Q 038386          354 QGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGG----YLVTKGISVNFLVADMGRDPNVWEDPLE  429 (523)
Q Consensus       354 ~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~  429 (523)
                      ......+.+.++++|.|++||+|||||+||.+..  .|.+.+|.++.+    |.||+|..|.++++.+|+||++|+||+.
T Consensus       320 ~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~--~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~  397 (486)
T KOG0684|consen  320 EKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL--MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPED  397 (486)
T ss_pred             ccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH--HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhh
Confidence            8766699999999999999999999999988877  899999999966    9999999999999999999999999999


Q ss_pred             CCCCcccccCCCCC-CCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEE
Q 038386          430 FKPERFLYCDDKNG-GKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTI  508 (523)
Q Consensus       430 F~P~Rfl~~~~~~~-~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  508 (523)
                      |+|+||++++.... .+..      -.+.+||||.|.|.||||.||.+|++.++..+|++||+++.+++.+......+++
T Consensus       398 Fk~dRf~~~~~~~~k~g~k------l~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~  471 (486)
T KOG0684|consen  398 FKPDRFLKDNGESKKNGEK------LDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVM  471 (486)
T ss_pred             CChhhccCCCccccccccc------ccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhc
Confidence            99999998764331 1111      1256799999999999999999999999999999999999984333333345689


Q ss_pred             eecCceeEEEeecC
Q 038386          509 EMKNPLHARISPRV  522 (523)
Q Consensus       509 ~~~~~~~~~~~~r~  522 (523)
                      .|..+++++.+.|.
T Consensus       472 ~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  472 QPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCCCceEEEeecC
Confidence            99999999999986


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-66  Score=514.64  Aligned_cols=438  Identities=23%  Similarity=0.286  Sum_probs=337.7

Q ss_pred             cceeeecccccCCCCCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc-ccccceeec
Q 038386           45 FHLLAHLLWHRKPLFQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS-IADDLIFAN  122 (523)
Q Consensus        45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~  122 (523)
                      .++.|++...+   .+..+++..+.++++ .+++++..+.  ++++||+.+++|+.++.+.|.+...+.. +.  .++| 
T Consensus        49 ~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~--~~~g-  120 (502)
T PLN02426         49 AYLTASWAKDF---DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG--DLLG-  120 (502)
T ss_pred             CCccHHHHHhc---ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH--HhcC-
Confidence            45778876642   345777777888887 5777776554  8999999999999877677776544321 11  2333 


Q ss_pred             cccceeeCcCCchhHHHhhhhccccccccccchhhhcc--hhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHh
Q 038386          123 KRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHS--HLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLL  200 (523)
Q Consensus       123 ~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~  200 (523)
                        .+++.. +|+.|+++|+.++   +.|+...++ .+.  ..+.+.++.+++.+.+..+...++++|+.++++.+++|++
T Consensus       121 --~gi~~~-~g~~wk~~Rk~l~---~~fs~~~l~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi  193 (502)
T PLN02426        121 --RGIFNV-DGDSWRFQRKMAS---LELGSVSIR-SYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNI  193 (502)
T ss_pred             --Cceeec-CcHHHHHHHHHhH---hhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHH
Confidence              366554 8999999999999   999999888 664  5777778888888877643212468999999999999999


Q ss_pred             hhhhccCCcchh----HHHHHHHHHHHHHHHHhhhhHHhhccccc---hhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHH
Q 038386          201 VKMCFGNNVEEQ----EIRELGCAQKKLFMIINKLKVFAIMPDLG---KILFRKRWKKFLGIIRSREDVFVGLVRDRKKI  273 (523)
Q Consensus       201 ~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  273 (523)
                      +.++||.+++..    ....+............ ......+|++.   +++.....++..+..+.+.++..++|+++++.
T Consensus       194 ~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~  272 (502)
T PLN02426        194 CKFSFGLDPGCLELSLPISEFADAFDTASKLSA-ERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKL  272 (502)
T ss_pred             HHHHhCCCCcccCCCCCccHHHHHHHHHHHHHH-HHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999987421    12233333333222111 11111223221   11112234566778888899999999988764


Q ss_pred             HhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Q 038386          274 KQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVE  353 (523)
Q Consensus       274 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  353 (523)
                      .   .   ....|+++.+++..       .+++++.+++.++++||+|||+++++|++++|++||++|++|++|++++.+
T Consensus       273 ~---~---~~~~dll~~ll~~~-------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~  339 (502)
T PLN02426        273 G---F---SASKDLLSRFMASI-------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMG  339 (502)
T ss_pred             c---c---CCcchHHHHHHhcC-------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC
Confidence            2   1   13468999999754       267899999999999999999999999999999999999999999999887


Q ss_pred             cCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee-CCEEeCCCCEEeeccccccCCCCCC-CCCCCCC
Q 038386          354 QGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL-GGYLVTKGISVNFLVADMGRDPNVW-EDPLEFK  431 (523)
Q Consensus       354 ~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~  431 (523)
                      .+...++.+++++||||+|||+|+||++|+++..  .|.+.+|..+ +|+.|||||.|.++.+++||||++| |||++|+
T Consensus       340 ~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~--~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~  417 (502)
T PLN02426        340 PNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD--SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFK  417 (502)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc--ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcC
Confidence            5445689999999999999999999999999987  7999998887 9999999999999999999999999 9999999


Q ss_pred             CCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC-CCCcccccceEEee
Q 038386          432 PERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE-DVDLSEKAEFTIEM  510 (523)
Q Consensus       432 P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~  510 (523)
                      ||||++.+.         .....+..++|||+|+|.|+|+++|++|++++++.|+++|++++.+. ...+....+.++.|
T Consensus       418 PeRwl~~~~---------~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02426        418 PERWLKNGV---------FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATV  488 (502)
T ss_pred             ccccCCCCC---------cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEec
Confidence            999996420         00112467999999999999999999999999999999999998652 22223334678899


Q ss_pred             cCceeEEEeecC
Q 038386          511 KNPLHARISPRV  522 (523)
Q Consensus       511 ~~~~~~~~~~r~  522 (523)
                      +++++|++++|.
T Consensus       489 ~~gl~v~~~~r~  500 (502)
T PLN02426        489 RGGLPVRVRERV  500 (502)
T ss_pred             CCCEEEEEEEcc
Confidence            999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.3e-60  Score=461.09  Aligned_cols=420  Identities=17%  Similarity=0.181  Sum_probs=302.9

Q ss_pred             CCCCCCCCCccceeeecccccC--CCCCccHHHHHHHhhcCC-eEEEEeCCEeE-------EEecCHHHHHHHHHh----
Q 038386           35 TQNLPPGPPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGP-IITVRMGSEPS-------IYICNNTLAHQALIN----  100 (523)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~-i~~~~~~~~~~-------v~v~~p~~i~~i~~~----  100 (523)
                      +.+.|||+.++|++|+++++++  ...++..++.+.++|||+ ||+++++|.|+       |++++|+.++.++..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            3466999999999999987765  456678999999999999 99999998665       999999999999964    


Q ss_pred             CCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhh
Q 038386          101 NGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCE  180 (523)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~  180 (523)
                      +++.|..  .+....  .++|.+....++..+|+.|+++|+++.   ++|+ ..++ .+.+.|.+.+.++++.|..... 
T Consensus        95 ~~~~~~~--~~~~~~--~l~G~~~~~s~~~~~g~~H~r~Rrll~---~~f~-~~~~-~~~~~m~~~~~~~~~~w~~~~~-  164 (480)
T PLN02648         95 KRDVFTG--TYMPST--AFTGGYRVLSYLDPSEPKHAKLKSFLF---ELLK-SRHR-RFIPEFRAAFAELFDTWEAELA-  164 (480)
T ss_pred             cccccee--eeccCc--cccCCceeeeecCCCCchHHHHHHHHH---HHHH-Hhhh-hhhhHHHHHHHHHHHHHHHHHh-
Confidence            3333332  222222  455532111444568999999999999   9999 4778 8999999999999999965433 


Q ss_pred             cCCCeeehhHHHHHHHHHHhhhhhccCCcchhHHH-HHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHH-------
Q 038386          181 CRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQEIR-ELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKF-------  252 (523)
Q Consensus       181 ~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~-------  252 (523)
                       +++.+|+.+.++.++++++++++||.+.+.+... .+......+...       ..+|.....+. ...++.       
T Consensus       165 -~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~-------~~~p~~~~~l~-~~~~~~i~~~~~~  235 (480)
T PLN02648        165 -KKGKAEFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLAL-------QLAPLASTGLP-HVLEELLLHTFPL  235 (480)
T ss_pred             -hCCCccccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHH-------HhhHHHHcCch-HHHHHHhhcccCC
Confidence             3567999999999999999999999877542111 111122111110       01111110000 000000       


Q ss_pred             -----HHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHH-HHhhcccchHHH
Q 038386          253 -----LGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDE-FISHGSDTIATA  326 (523)
Q Consensus       253 -----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~  326 (523)
                           .+..+.+.+++                     .+.++.+++...   +.+++++|++++++. +.+++++||+++
T Consensus       236 ~~~~~~~~~~~~~~~~---------------------~~~~~~ll~~~~---~~~l~~~ei~~~~l~~~~~~t~~~~~~~  291 (480)
T PLN02648        236 PFFLVKSDYDKLYDFF---------------------RASATEALDLAE---KFGISREEALHNLLFVLGFNAFGGFKIF  291 (480)
T ss_pred             chhhhhccHHHHHHHH---------------------HHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHhhHHHHHH
Confidence                 00000111111                     112234444332   134999999999876 456778888899


Q ss_pred             HHHHHHHHHhCcH-HHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeC----C
Q 038386          327 LHWVMANVVKYPK-IQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELG----G  401 (523)
Q Consensus       327 l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~----g  401 (523)
                      ++|++++|++||+ +|++|++|++++.+..+..++.+++++||||++||+|+||++|+++..  .|.+.+|++++    |
T Consensus       292 l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~--~r~a~~d~~l~~~~~g  369 (480)
T PLN02648        292 FPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ--YGRAREDFVIESHDAA  369 (480)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc--cceecCCEEEecCCce
Confidence            9999999999995 999999999999864335689999999999999999999999999987  78899999996    7


Q ss_pred             EEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHH
Q 038386          402 YLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYF  481 (523)
Q Consensus       402 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~  481 (523)
                      |.||||+.|+++.+.+||||++|+||++|||+||++.+.+... ..  ..-.......+||+|+|.|+|++||++|++++
T Consensus       370 ~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~-~~--~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~  446 (480)
T PLN02648        370 FEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLL-KY--VFWSNGRETESPTVGNKQCAGKDFVVLVARLF  446 (480)
T ss_pred             EEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccc-cc--cccCCCcccCCCCCCCccCccHHHHHHHHHHH
Confidence            9999999999999999999999999999999999865311000 00  00000112334478889999999999999999


Q ss_pred             HHHHhhhcE-eEecCCCCCccc
Q 038386          482 VANLIWKFE-WNKADEDVDLSE  502 (523)
Q Consensus       482 l~~ll~~f~-~~~~~~~~~~~~  502 (523)
                      +++|+++|+ +++.++...+..
T Consensus       447 la~Ll~~f~~~~l~~~~~~~~~  468 (480)
T PLN02648        447 VAELFLRYDSFEIEVDTSGLGS  468 (480)
T ss_pred             HHHHHHHhCEEeecCCcccccc
Confidence            999999998 998775444443


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2e-53  Score=409.18  Aligned_cols=383  Identities=24%  Similarity=0.347  Sum_probs=301.4

Q ss_pred             ccHHHHHHHhhcCCeEEEEeCCEe--EEEecCHHHHHHHHHhCCcccccCCCCCccc--ccceeeccccceeeCcCCchh
Q 038386           61 LGPIISTLRLKYGPIITVRMGSEP--SIYICNNTLAHQALINNGTVFADRPKSTSIA--DDLIFANKRRGISTYPYGTTW  136 (523)
Q Consensus        61 ~~~~~~~~~~kyG~i~~~~~~~~~--~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~g~~w  136 (523)
                      +......+.+.||.+++.+..+.-  ++++++|+++++++.++. .+++........  ....++.   +.+...+|+.|
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~ll~~dg~~H   99 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGD---GSLLTLDGPEH   99 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccc---cceeecCCHHH
Confidence            445667788899999888876654  799999999999996543 222222111110  0033332   32445599999


Q ss_pred             HHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcchhHHHH
Q 038386          137 RVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQEIRE  216 (523)
Q Consensus       137 ~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~~~~  216 (523)
                      +++|++++   ++|+++.++ .+.+.+.+.+.++++.+ .     .++.+++.+.+..+++++++ .+||.+.++.  ..
T Consensus       100 ~r~Rkl~~---~~F~~~~~~-~~~~~i~~~~~~~~~~~-~-----~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~--~~  166 (411)
T COG2124         100 TRLRKLLA---PAFTPRALR-GYRPLIREIADRLLDDL-W-----QGGADLVLDFAAELTLRVIA-ELLGVPLEDR--PQ  166 (411)
T ss_pred             HHHHHHhc---cccCHHHHH-HHHHHHHHHHHHHHHhc-c-----cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH--HH
Confidence            99999999   999999999 99999999999999998 3     24678899999999999999 9999987432  12


Q ss_pred             HHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhC
Q 038386          217 LGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRL  296 (523)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~  296 (523)
                      +..........        ..|...   ....+.+..++...+.+++.++|++++..         +..|+++.|+.+..
T Consensus       167 ~~~~~~~~~~~--------~~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~---------~~~dlls~l~~a~~  226 (411)
T COG2124         167 LLRWSDALLLR--------LDPDLG---PEEPWRRARAARRELDAYLRALIAERRAA---------PRDDLLSLLLSAED  226 (411)
T ss_pred             HHHHHHHHHhc--------cCcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC---------CcccHHHHHHHHhh
Confidence            22222111111        112222   12335677889999999999999999832         66899999999885


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHh
Q 038386          297 PSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILE  376 (523)
Q Consensus       297 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E  376 (523)
                      + ++..+|++|++++++++++||+|||+++++|+++.|++||++++++++|.+.                 ||++++++|
T Consensus       227 ~-~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-----------------~~~~~~v~E  288 (411)
T COG2124         227 D-GGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-----------------PLLEAVVEE  288 (411)
T ss_pred             C-CCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------------HHHHHHHHH
Confidence            4 2226999999999999999999999999999999999999999999998763                 799999999


Q ss_pred             hhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcc
Q 038386          377 GLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREI  456 (523)
Q Consensus       377 ~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~  456 (523)
                      +||++|+++..  .|.+.+|++++|+.||||+.|+++++++||||++|++|++|||+||.                   .
T Consensus       289 ~LR~~ppv~~~--~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-------------------~  347 (411)
T COG2124         289 TLRLYPPVPLA--RRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-------------------N  347 (411)
T ss_pred             HHHhCCchhcc--ceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------------------C
Confidence            99999999976  99999999999999999999999999999999999999999999988                   2


Q ss_pred             cccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCceeEEEeec
Q 038386          457 KMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLHARISPR  521 (523)
Q Consensus       457 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (523)
                      .|+|||+|+|.|+|..||++|++++++.++++|++..........  ...+..+..+..+.++.|
T Consensus       348 ~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~~~~~--~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         348 AHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEPPPLV--RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCCCCCcc--ccccccCCCcceeeeecC
Confidence            499999999999999999999999999999999987665411122  233344444555555443


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=70.83  E-value=4  Score=32.28  Aligned_cols=24  Identities=13%  Similarity=0.141  Sum_probs=9.8

Q ss_pred             hhHHHHHHHHHHHHHHHHhcccCc
Q 038386            9 IPISLFLAFLVRFILALLLSSSSE   32 (523)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~   32 (523)
                      +++++++++++++++.++...+++
T Consensus         4 l~~iii~~i~l~~~~~~~~~rRR~   27 (130)
T PF12273_consen    4 LFAIIIVAILLFLFLFYCHNRRRR   27 (130)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHHh
Confidence            344444444444444444443333


No 34 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=58.66  E-value=30  Score=33.66  Aligned_cols=39  Identities=10%  Similarity=0.161  Sum_probs=22.9

Q ss_pred             HhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCccccc
Q 038386           69 RLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFAD  107 (523)
Q Consensus        69 ~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~  107 (523)
                      .-+||.|+.-.+-++.+-|=.=|+.=++-+.++...|+.
T Consensus       220 ~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  220 RGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             cCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            347899987777776544434444444445455556553


No 35 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=58.46  E-value=19  Score=22.83  Aligned_cols=28  Identities=43%  Similarity=0.475  Sum_probs=15.1

Q ss_pred             CcccchhhhhHHHHHHHHHHHHHHHHhcc
Q 038386            1 MEILYYIIIPISLFLAFLVRFILALLLSS   29 (523)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~   29 (523)
                      |++ .++++++++++.++.+.++.+..+.
T Consensus         1 M~i-l~~LIpiSl~l~~~~l~~f~Wavk~   28 (51)
T TIGR00847         1 MEI-LTILIPISLLLGGVGLVAFLWSLKS   28 (51)
T ss_pred             Cch-HHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            555 3455666666665555555444443


No 36 
>PF15102 TMEM154:  TMEM154 protein family
Probab=53.76  E-value=13  Score=29.69  Aligned_cols=7  Identities=43%  Similarity=0.999  Sum_probs=3.6

Q ss_pred             chhhhhH
Q 038386            5 YYIIIPI   11 (523)
Q Consensus         5 ~~~~~~~   11 (523)
                      +++++|+
T Consensus        59 LmIlIP~   65 (146)
T PF15102_consen   59 LMILIPL   65 (146)
T ss_pred             EEEeHHH
Confidence            4455554


No 37 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=52.25  E-value=71  Score=23.34  Aligned_cols=39  Identities=13%  Similarity=0.060  Sum_probs=32.7

Q ss_pred             CccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhccc
Q 038386          283 DSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSD  321 (523)
Q Consensus       283 ~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~  321 (523)
                      .+++.++.+++..+...++.++-+|-...+..+..|.++
T Consensus        45 ~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ac~~   83 (91)
T cd05024          45 NDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLIACND   83 (91)
T ss_pred             CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence            457899999998887778899999999988888877664


No 38 
>COG3197 FixS Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism]
Probab=51.84  E-value=26  Score=22.69  Aligned_cols=23  Identities=43%  Similarity=0.660  Sum_probs=12.1

Q ss_pred             CcccchhhhhHHHHHHHHHHHHHH
Q 038386            1 MEILYYIIIPISLFLAFLVRFILA   24 (523)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~   24 (523)
                      |+++ ++++++++++.++.+.++.
T Consensus         1 m~~l-~~Lipvsi~l~~v~l~~fl   23 (58)
T COG3197           1 MEIL-YILIPVSILLGAVGLGAFL   23 (58)
T ss_pred             Ccee-eeHHHHHHHHHHHHHHHHH
Confidence            5663 3555666655555544443


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.60  E-value=16  Score=23.79  Aligned_cols=18  Identities=17%  Similarity=0.453  Sum_probs=15.5

Q ss_pred             HHHHHHhCcHHHHHHHHH
Q 038386          330 VMANVVKYPKIQAKILDE  347 (523)
Q Consensus       330 ~l~~L~~~p~~~~~l~~E  347 (523)
                      ++.+|.+||++.+++.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            567999999999999864


No 40 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=49.74  E-value=1e+02  Score=23.07  Aligned_cols=58  Identities=24%  Similarity=0.264  Sum_probs=40.7

Q ss_pred             CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC------EeEEEecCHHHHHHHH
Q 038386           36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS------EPSIYICNNTLAHQAL   98 (523)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~------~~~v~v~~p~~i~~i~   98 (523)
                      .++||--..+-++.|++-     +--.+-+-++.-+||.|-++++|.      .-+||-.|-.+++...
T Consensus        11 ~rlppevnriLyirNLp~-----~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~   74 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPF-----KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKAC   74 (124)
T ss_pred             CCCChhhheeEEEecCCc-----cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHH
Confidence            345555555666666642     234567788999999999999874      3467778888877776


No 41 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=49.05  E-value=50  Score=20.69  Aligned_cols=42  Identities=12%  Similarity=0.261  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHH
Q 038386          307 EIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEI  348 (523)
Q Consensus       307 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  348 (523)
                      ++...+..++=.|.+..+..+.--+.+..-||+.+..+..|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            445556666666777777777777777777999888888776


No 42 
>PRK06789 flagellar motor switch protein; Validated
Probab=45.94  E-value=25  Score=24.45  Aligned_cols=41  Identities=10%  Similarity=-0.061  Sum_probs=32.5

Q ss_pred             HHHhhhcCCCCCCCCCCCcccccC--ceeCCEEeCCCCEEeecc
Q 038386          373 VILEGLRRHPPVYLLDTPHAVTED--VELGGYLVTKGISVNFLV  414 (523)
Q Consensus       373 ~i~E~lRl~~~~~~~~~~R~~~~d--~~~~g~~ip~G~~v~~~~  414 (523)
                      -++|-+.+.+-...- +.|.+.++  +.++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~-Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYR-LENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEE-eCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            367889999877766 78888665  555999999999988753


No 43 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=44.84  E-value=18  Score=30.90  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=33.1

Q ss_pred             CChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEee
Q 038386          366 KMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNF  412 (523)
Q Consensus       366 ~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  412 (523)
                      .-..+.|||.|++-...-.. +  .=...+|+.++|..|||||.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~-v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR-V--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE-E--EEEEcCceEECCEEeCCCCEEEE
Confidence            45678899999988765332 2  22347899999999999998765


No 44 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=40.96  E-value=6  Score=37.83  Aligned_cols=44  Identities=14%  Similarity=0.144  Sum_probs=33.3

Q ss_pred             CChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEee
Q 038386          366 KMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNF  412 (523)
Q Consensus       366 ~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  412 (523)
                      .-..+.|||.|++-+.-.. .+  .=...+|+.++|..|||||.|+-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~-~v--rlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGS-AV--KLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCC-EE--EEEEcCceeeCCEEecCCCEEEE
Confidence            4568899999999887533 22  22347899999999999998754


No 45 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=40.26  E-value=64  Score=24.43  Aligned_cols=11  Identities=9%  Similarity=-0.118  Sum_probs=8.2

Q ss_pred             ccceeeecccc
Q 038386           44 RFHLLAHLLWH   54 (523)
Q Consensus        44 ~~p~~G~~~~~   54 (523)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            57889997654


No 46 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=39.86  E-value=13  Score=23.56  Aligned_cols=11  Identities=45%  Similarity=0.963  Sum_probs=9.2

Q ss_pred             cccCCCCCCCc
Q 038386          459 MPFGAGRRVCP  469 (523)
Q Consensus       459 ~~Fg~G~r~C~  469 (523)
                      -+||.|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999983


No 47 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=38.46  E-value=35  Score=21.93  Aligned_cols=6  Identities=83%  Similarity=1.996  Sum_probs=4.4

Q ss_pred             CCCCCc
Q 038386           39 PPGPPR   44 (523)
Q Consensus        39 ppgp~~   44 (523)
                      ||||++
T Consensus        56 PPGpp~   61 (62)
T COG4459          56 PPGPPG   61 (62)
T ss_pred             CCCCCC
Confidence            788764


No 48 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=34.66  E-value=99  Score=19.65  Aligned_cols=35  Identities=14%  Similarity=0.204  Sum_probs=24.7

Q ss_pred             HHHHHhhcCCeEEEEeCCE----eEEEecCHHHHHHHHH
Q 038386           65 ISTLRLKYGPIITVRMGSE----PSIYICNNTLAHQALI   99 (523)
Q Consensus        65 ~~~~~~kyG~i~~~~~~~~----~~v~v~~p~~i~~i~~   99 (523)
                      +.++.++||+|-.+.+...    =+|-..+.+.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            3577899999998886542    3455578888888774


No 49 
>PF03597 CcoS:  Cytochrome oxidase maturation protein cbb3-type;  InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase. 
Probab=33.79  E-value=84  Score=19.41  Aligned_cols=24  Identities=33%  Similarity=0.606  Sum_probs=12.5

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhcc
Q 038386            6 YIIIPISLFLAFLVRFILALLLSS   29 (523)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~   29 (523)
                      ++++++++++.++++.++.+..+.
T Consensus         4 ~~lip~sl~l~~~~l~~f~Wavk~   27 (45)
T PF03597_consen    4 YILIPVSLILGLIALAAFLWAVKS   27 (45)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcc
Confidence            455566666655555544444443


No 50 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=33.39  E-value=1.8e+02  Score=20.89  Aligned_cols=51  Identities=14%  Similarity=0.095  Sum_probs=43.4

Q ss_pred             CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Q 038386          303 LEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVE  353 (523)
Q Consensus       303 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  353 (523)
                      ...+.........++-=+..++....-.+.+-++||+..+++.+.+...+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            455666667778888999999999999999999999999999999887654


No 51 
>PF06667 PspB:  Phage shock protein B;  InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=32.92  E-value=71  Score=22.33  Aligned_cols=20  Identities=20%  Similarity=0.652  Sum_probs=9.7

Q ss_pred             chhhhhHHHHHHHHHHHHHH
Q 038386            5 YYIIIPISLFLAFLVRFILA   24 (523)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~   24 (523)
                      .+++.++.+++++++.+.+.
T Consensus         4 ~fl~~plivf~ifVap~WL~   23 (75)
T PF06667_consen    4 EFLFVPLIVFMIFVAPIWLI   23 (75)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            44555555555544444433


No 52 
>PF15183 MRAP:  Melanocortin-2 receptor accessory protein family
Probab=31.18  E-value=1.5e+02  Score=21.05  Aligned_cols=20  Identities=25%  Similarity=0.300  Sum_probs=9.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHH
Q 038386            7 IIIPISLFLAFLVRFILALL   26 (523)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~   26 (523)
                      +..++.+++.+++++++..+
T Consensus        40 I~FWv~LA~FV~~lF~iL~~   59 (90)
T PF15183_consen   40 IAFWVSLAAFVVFLFLILLY   59 (90)
T ss_pred             hhHHHHHHHHHHHHHHHHHH
Confidence            44455555544444444333


No 53 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=30.29  E-value=28  Score=23.48  Aligned_cols=14  Identities=21%  Similarity=0.411  Sum_probs=12.0

Q ss_pred             hhHHHHHHhhhcCC
Q 038386          368 PYLKAVILEGLRRH  381 (523)
Q Consensus       368 p~L~a~i~E~lRl~  381 (523)
                      -+++.+|+|++|..
T Consensus        41 ~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   41 QFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHH
Confidence            68999999999963


No 54 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=29.48  E-value=1.2e+02  Score=18.06  Aligned_cols=28  Identities=25%  Similarity=0.306  Sum_probs=18.4

Q ss_pred             cHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhc
Q 038386          338 PKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLR  379 (523)
Q Consensus       338 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lR  379 (523)
                      .++++.+|.|++.+-..              .++|+..|-.|
T Consensus        10 qEIL~EvrkEl~K~K~E--------------IIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKVKEE--------------IIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHHHH--------------HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH--------------HHHHHHHHHhc
Confidence            56777888888765432              56676666554


No 55 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=29.42  E-value=35  Score=26.51  Aligned_cols=22  Identities=36%  Similarity=0.422  Sum_probs=18.1

Q ss_pred             cccccCceeCCEEeCCCCEEee
Q 038386          391 HAVTEDVELGGYLVTKGISVNF  412 (523)
Q Consensus       391 R~~~~d~~~~g~~ip~G~~v~~  412 (523)
                      -++++|..++|-.||+|+.|+.
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            4556799999999999998854


No 56 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=29.27  E-value=1.5e+02  Score=21.35  Aligned_cols=18  Identities=22%  Similarity=0.305  Sum_probs=15.7

Q ss_pred             cHHHHHHHHHHHHhhhcC
Q 038386          338 PKIQAKILDEINGVVEQG  355 (523)
Q Consensus       338 p~~~~~l~~Ei~~~~~~~  355 (523)
                      |++...+|+||-+++..+
T Consensus        36 pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          36 PDYLEQLRKEILEVISKY   53 (88)
T ss_pred             cchHHHHHHHHHHHHHHH
Confidence            999999999999987653


No 57 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=28.64  E-value=95  Score=28.67  Aligned_cols=71  Identities=15%  Similarity=0.192  Sum_probs=42.8

Q ss_pred             HHHHHhhhcCCCCCCCCC--CCcccccCcee---C-CEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCC
Q 038386          371 KAVILEGLRRHPPVYLLD--TPHAVTEDVEL---G-GYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGG  444 (523)
Q Consensus       371 ~a~i~E~lRl~~~~~~~~--~~R~~~~d~~~---~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~  444 (523)
                      +.+++.|..+.||+...-  +.-+++.|..+   + .-.|..||.|.++ .                             
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-G-----------------------------  325 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-G-----------------------------  325 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-C-----------------------------
Confidence            457777888888654330  23333444332   1 2457778777653 1                             


Q ss_pred             CCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHH
Q 038386          445 KNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVA  483 (523)
Q Consensus       445 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~  483 (523)
                               .|++++-||.+  +-.||++|. |+|.++-
T Consensus       326 ---------spYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         326 ---------SPYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             ---------CcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence                     23666667766  566999998 7777653


No 58 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=27.99  E-value=95  Score=18.33  Aligned_cols=19  Identities=21%  Similarity=0.427  Sum_probs=12.7

Q ss_pred             HHHHHHHH-hCcHHHHHHHH
Q 038386          328 HWVMANVV-KYPKIQAKILD  346 (523)
Q Consensus       328 ~~~l~~L~-~~p~~~~~l~~  346 (523)
                      -.++..++ +||++++.++.
T Consensus        16 ~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   16 QSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHhChhHHHHHHh
Confidence            33444455 79999988864


No 59 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=27.55  E-value=51  Score=25.96  Aligned_cols=23  Identities=22%  Similarity=0.391  Sum_probs=16.8

Q ss_pred             CCCcchHHHHHHHHHHHHHHhhh
Q 038386          466 RVCPGLGLAILNLEYFVANLIWK  488 (523)
Q Consensus       466 r~C~G~~~a~~~~~~~l~~ll~~  488 (523)
                      ..|.|+.||+.++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999863


No 60 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.44  E-value=38  Score=29.12  Aligned_cols=20  Identities=30%  Similarity=0.542  Sum_probs=17.8

Q ss_pred             ccccCCCCCCCCCCCCCCCc
Q 038386          415 ADMGRDPNVWEDPLEFKPER  434 (523)
Q Consensus       415 ~~~~~d~~~~~~p~~F~P~R  434 (523)
                      +.-+.|+.+|.|...|+|.|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            45588999999999999998


No 61 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=27.36  E-value=48  Score=24.81  Aligned_cols=13  Identities=0%  Similarity=0.278  Sum_probs=4.7

Q ss_pred             HHHHHHHHHHHhc
Q 038386           16 AFLVRFILALLLS   28 (523)
Q Consensus        16 ~~~~~~~~~~~~~   28 (523)
                      ++++++++.+++.
T Consensus        74 IlVily~IyYFVI   86 (101)
T PF06024_consen   74 ILVILYAIYYFVI   86 (101)
T ss_pred             HHHHHhhheEEEE
Confidence            3333333333333


No 62 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=25.39  E-value=1.8e+02  Score=19.69  Aligned_cols=14  Identities=14%  Similarity=0.263  Sum_probs=5.8

Q ss_pred             HHHHHHHHHHHHHH
Q 038386           11 ISLFLAFLVRFILA   24 (523)
Q Consensus        11 ~~~~~~~~~~~~~~   24 (523)
                      +.+|+++++++++.
T Consensus         8 i~ICVaii~lIlY~   21 (68)
T PF05961_consen    8 IIICVAIIGLILYG   21 (68)
T ss_pred             HHHHHHHHHHHHHH
Confidence            33444444444333


No 63 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=25.20  E-value=3.1e+02  Score=20.78  Aligned_cols=64  Identities=17%  Similarity=0.156  Sum_probs=36.0

Q ss_pred             CccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhccc--------chHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Q 038386          283 DSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSD--------TIATALHWVMANVVKYPKIQAKILDEINGV  351 (523)
Q Consensus       283 ~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~--------tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  351 (523)
                      +..++...|++...     ..--+-+......++.|...        -++-.+.+++..|..+-=-.+.+.+|+..-
T Consensus        20 ~~~SYT~~L~~~G~-----~ki~kKlgEEa~E~i~A~~~~d~~~~i~E~ADLlYHllVlL~~~gv~~~dV~~eL~~R   91 (105)
T PRK00400         20 PEGSYTAKLLDKGL-----DKILKKVGEEATEVVIAAKDGDREELVYEIADLLYHLLVLLAARGISLEDVLAELERR   91 (105)
T ss_pred             CCCcHHHHHHHCCH-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            45678888876321     11123344455555555432        245566677777777755566666666654


No 64 
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=25.18  E-value=2.7e+02  Score=20.17  Aligned_cols=37  Identities=11%  Similarity=0.103  Sum_probs=28.6

Q ss_pred             cchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhccc
Q 038386          285 ESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSD  321 (523)
Q Consensus       285 ~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~  321 (523)
                      +.-++.+++..+.+.++.++.+|....+..+..|.++
T Consensus        51 ~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~~~~~~   87 (89)
T cd05023          51 PGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAVACHE   87 (89)
T ss_pred             HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHHHHHh
Confidence            4567778887766567889999999888887776654


No 65 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=24.65  E-value=29  Score=27.41  Aligned_cols=15  Identities=7%  Similarity=0.319  Sum_probs=5.6

Q ss_pred             HHHHHHHHHHHHhcc
Q 038386           15 LAFLVRFILALLLSS   29 (523)
Q Consensus        15 ~~~~~~~~~~~~~~~   29 (523)
                      +++++++++++++..
T Consensus         7 iii~~i~l~~~~~~~   21 (130)
T PF12273_consen    7 IIIVAILLFLFLFYC   21 (130)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            333333333333333


No 66 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=24.15  E-value=2.3e+02  Score=20.51  Aligned_cols=19  Identities=11%  Similarity=0.345  Sum_probs=16.4

Q ss_pred             CcHHHHHHHHHHHHhhhcC
Q 038386          337 YPKIQAKILDEINGVVEQG  355 (523)
Q Consensus       337 ~p~~~~~l~~Ei~~~~~~~  355 (523)
                      .|++++.+++||-+++..+
T Consensus        35 ~p~~l~~lk~eil~VIsKY   53 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKRY   53 (87)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            5999999999999988754


No 67 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=24.07  E-value=2e+02  Score=22.54  Aligned_cols=38  Identities=13%  Similarity=0.150  Sum_probs=29.2

Q ss_pred             CccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHH
Q 038386           60 QLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALI   99 (523)
Q Consensus        60 ~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~   99 (523)
                      +....+++|.++||.+- + ..+...+...|++.++++..
T Consensus        75 ~v~~~i~~w~~~~g~v~-l-~~~~~~l~~~d~~~l~~l~~  112 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVR-L-YKGAYLLECDDPELLDELLA  112 (129)
T ss_pred             HHHHHHHHHHHhcCCEE-E-ecCeEEEEECCHHHHHHHHh
Confidence            56678999999999873 2 22366677899999999983


No 68 
>PRK09458 pspB phage shock protein B; Provisional
Probab=24.05  E-value=1.6e+02  Score=20.58  Aligned_cols=20  Identities=25%  Similarity=0.683  Sum_probs=9.8

Q ss_pred             chhhhhHHHHHHHHHHHHHH
Q 038386            5 YYIIIPISLFLAFLVRFILA   24 (523)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~   24 (523)
                      .++..|+.+++++++-+.+.
T Consensus         4 ~fl~~PliiF~ifVaPiWL~   23 (75)
T PRK09458          4 LFLAIPLTIFVLFVAPIWLW   23 (75)
T ss_pred             hHHHHhHHHHHHHHHHHHHH
Confidence            34445555555555544443


No 69 
>PRK05933 type III secretion system protein; Validated
Probab=23.44  E-value=71  Score=29.41  Aligned_cols=45  Identities=20%  Similarity=0.078  Sum_probs=35.1

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCCccc---ccCceeCCEEeCCCCEEeecc
Q 038386          369 YLKAVILEGLRRHPPVYLLDTPHAV---TEDVELGGYLVTKGISVNFLV  414 (523)
Q Consensus       369 ~L~a~i~E~lRl~~~~~~~~~~R~~---~~d~~~~g~~ip~G~~v~~~~  414 (523)
                      -.+.-|+|.++|.+....- +-|.+   .-|+.++|..|.+|..|.++-
T Consensus       316 RT~l~IkELL~L~~GSVIe-LDk~a~GEpVDI~VNGrLIARGEVVVVdd  363 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQ-FDGVHPTLGVDIILNGAKVGRGEIIALGD  363 (372)
T ss_pred             cccccHHHHhccCCCCEEE-eCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence            4566789999999977766 65664   346777999999999998763


No 70 
>PHA03049 IMV membrane protein; Provisional
Probab=22.86  E-value=1.9e+02  Score=19.46  Aligned_cols=12  Identities=17%  Similarity=0.526  Sum_probs=5.3

Q ss_pred             CCCCCCCCccce
Q 038386           36 QNLPPGPPRFHL   47 (523)
Q Consensus        36 ~~~ppgp~~~p~   47 (523)
                      ...||.|.-.+.
T Consensus        30 q~~~p~~e~ye~   41 (68)
T PHA03049         30 SQNPPSQEKYEK   41 (68)
T ss_pred             CCCCCChhhccC
Confidence            344555444433


No 71 
>PF10272 Tmpp129:  Putative transmembrane protein precursor;  InterPro: IPR018801  This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown. 
Probab=22.45  E-value=1.7e+02  Score=27.76  Aligned_cols=47  Identities=6%  Similarity=0.157  Sum_probs=29.3

Q ss_pred             cceeeecccccCCCCCccHHHHHHHhhcC--CeEEEEeCCEeEEEecCH
Q 038386           45 FHLLAHLLWHRKPLFQLGPIISTLRLKYG--PIITVRMGSEPSIYICNN   91 (523)
Q Consensus        45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG--~i~~~~~~~~~~v~v~~p   91 (523)
                      +|+.-++..+.....+........-.+|.  +-|.+.+++...|+|+|-
T Consensus       109 HPi~k~L~~y~~~~~~W~~VAs~IN~EfRriDKf~i~~~~~srvivTds  157 (358)
T PF10272_consen  109 HPIAKNLKKYSNPNSDWRAVASSINTEFRRIDKFVIGLNGISRVIVTDS  157 (358)
T ss_pred             ChHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCEEEecCCCceEEEEeCC
Confidence            66666655443333466777778888886  466667777444665543


No 72 
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=21.68  E-value=1e+02  Score=17.03  Aligned_cols=6  Identities=50%  Similarity=0.761  Sum_probs=2.6

Q ss_pred             Ccccch
Q 038386            1 MEILYY    6 (523)
Q Consensus         1 m~~~~~    6 (523)
                      ||.+.+
T Consensus         1 MEal~Y    6 (31)
T PRK11875          1 MESFAY    6 (31)
T ss_pred             ChhHHH
Confidence            444333


No 73 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=21.58  E-value=3.5e+02  Score=21.79  Aligned_cols=50  Identities=10%  Similarity=0.175  Sum_probs=36.8

Q ss_pred             ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 038386           46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALIN  100 (523)
Q Consensus        46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~  100 (523)
                      -++|++..-     --.+.+.++.++||+|..+.+.         +.-+|-..+++.++.++..
T Consensus        37 lfVgnL~~~-----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         37 LFIGGLSWG-----TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEEeCCCCC-----CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            356666533     2467899999999998887763         3346777999999999853


No 74 
>CHL00031 psbT photosystem II protein T
Probab=20.68  E-value=86  Score=17.66  Aligned_cols=7  Identities=57%  Similarity=0.819  Sum_probs=3.1

Q ss_pred             Ccccchh
Q 038386            1 MEILYYI    7 (523)
Q Consensus         1 m~~~~~~    7 (523)
                      ||.+.+.
T Consensus         1 MEalvYt    7 (33)
T CHL00031          1 MEALVYT    7 (33)
T ss_pred             CchhHHH
Confidence            4554433


No 75 
>PF13993 YccJ:  YccJ-like protein
Probab=20.68  E-value=1.2e+02  Score=19.89  Aligned_cols=31  Identities=10%  Similarity=0.108  Sum_probs=23.5

Q ss_pred             hhcccchHHHHHHHHHHHHhCcHHH-HHHHHH
Q 038386          317 SHGSDTIATALHWVMANVVKYPKIQ-AKILDE  347 (523)
Q Consensus       317 ~ag~~tt~~~l~~~l~~L~~~p~~~-~~l~~E  347 (523)
                      +|..-.||.-++-++++|+.+-+.+ +++.+|
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee   39 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE   39 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence            5666778889999999999997744 455554


No 76 
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z,  the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=20.62  E-value=3.1e+02  Score=19.97  Aligned_cols=37  Identities=16%  Similarity=0.156  Sum_probs=29.6

Q ss_pred             cchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhccc
Q 038386          285 ESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSD  321 (523)
Q Consensus       285 ~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~  321 (523)
                      ..-++.+++..+.+.++.++.+|....+..+..|.++
T Consensus        52 ~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~~~~~   88 (93)
T cd05026          52 PMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTVACND   88 (93)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            4567778888766567889999999999988887765


No 77 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=20.57  E-value=67  Score=23.00  Aligned_cols=20  Identities=10%  Similarity=0.386  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHhhhcEeEecC
Q 038386          476 LNLEYFVANLIWKFEWNKAD  495 (523)
Q Consensus       476 ~~~~~~l~~ll~~f~~~~~~  495 (523)
                      ..|+-++.++|+-|||.|.+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            45889999999999999986


No 78 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=20.46  E-value=80  Score=25.47  Aligned_cols=39  Identities=23%  Similarity=0.573  Sum_probs=26.1

Q ss_pred             ccCceeCCEEeCCCCEEeeccc-------cccCCCCCCCCCCCCCCC
Q 038386          394 TEDVELGGYLVTKGISVNFLVA-------DMGRDPNVWEDPLEFKPE  433 (523)
Q Consensus       394 ~~d~~~~g~~ip~G~~v~~~~~-------~~~~d~~~~~~p~~F~P~  433 (523)
                      .+|+.++|..||+|++-+..+.       .+|.+...|.. ..|+|+
T Consensus        53 ~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            6899999999999987665442       23445555643 445554


Done!