Query 038386
Match_columns 523
No_of_seqs 187 out of 1823
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 18:06:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 1.3E-77 4.4E-82 599.8 38.2 463 31-523 4-477 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 1.8E-77 6.3E-82 600.2 35.9 460 34-522 5-479 (494)
3 3pm0_A Cypib1, cytochrome P450 100.0 1.9E-77 6.6E-82 602.8 33.6 464 32-522 4-484 (507)
4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 5.4E-76 1.9E-80 587.4 38.7 457 32-523 5-473 (476)
5 3s79_A Cytochrome P450 19A1; o 100.0 1.4E-76 4.9E-81 595.6 33.1 448 35-523 43-497 (503)
6 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.8E-76 6.1E-81 592.0 32.2 454 31-521 18-482 (482)
7 3qz1_A Steroid 21-hydroxylase; 100.0 1.5E-76 5.2E-81 594.4 29.8 450 30-522 22-484 (496)
8 3nxu_A Cytochrome P450 3A4; al 100.0 2.6E-76 9E-81 590.9 28.0 453 37-523 14-476 (485)
9 2fdv_A Cytochrome P450 2A6; CY 100.0 5.6E-75 1.9E-79 578.9 36.7 452 37-522 10-473 (476)
10 3ld6_A Lanosterol 14-alpha dem 100.0 8E-77 2.7E-81 589.7 22.2 444 37-523 11-455 (461)
11 2hi4_A Cytochrome P450 1A2; CY 100.0 1.5E-75 5.3E-80 585.6 31.4 460 34-522 13-488 (495)
12 3n9y_A Cholesterol SIDE-chain 100.0 4.8E-75 1.6E-79 582.1 34.0 462 31-523 3-476 (487)
13 3czh_A Cytochrome P450 2R1; vi 100.0 7.3E-75 2.5E-79 578.2 34.5 458 34-522 9-476 (481)
14 1po5_A Cytochrome P450 2B4; ox 100.0 8E-75 2.7E-79 577.8 34.1 453 37-523 10-474 (476)
15 1r9o_A Cytochrome P450 2C9; mo 100.0 1.2E-74 4.1E-79 576.9 35.0 452 37-522 11-474 (477)
16 3gw9_A Sterol 14alpha-demethyl 100.0 1.6E-73 5.5E-78 565.5 29.5 440 36-522 2-450 (450)
17 2cib_A Cytochrome P450 51; hem 100.0 2.5E-73 8.6E-78 563.0 29.9 443 37-522 4-449 (455)
18 2ve3_A Putative cytochrome P45 100.0 4.2E-73 1.4E-77 559.6 30.4 437 33-522 8-444 (444)
19 2ij2_A Cytochrome P450 BM3; mo 100.0 1E-72 3.4E-77 560.8 33.2 444 37-522 3-452 (470)
20 3i3k_A Lanosterol 14-alpha dem 100.0 6.1E-72 2.1E-76 555.2 23.6 443 34-518 8-451 (461)
21 3dbg_A Putative cytochrome P45 100.0 3.6E-71 1.2E-75 550.1 27.9 436 37-521 23-461 (467)
22 3mdm_A Cholesterol 24-hydroxyl 100.0 1.2E-69 4.1E-74 538.2 36.6 427 58-522 9-442 (456)
23 3v8d_A Cholesterol 7-alpha-mon 100.0 1.3E-67 4.5E-72 528.2 18.4 453 32-519 8-483 (491)
24 3dax_A Cytochrome P450 7A1; ch 100.0 3.5E-67 1.2E-71 525.8 20.6 455 33-521 9-485 (491)
25 3b6h_A Prostacyclin synthase; 100.0 3.7E-65 1.3E-69 511.6 26.8 456 32-522 13-490 (498)
26 2cd8_A Cytochrome P450 monooxy 100.0 4.4E-65 1.5E-69 499.2 26.7 400 36-523 25-430 (436)
27 1izo_A P450bsbeta, cytochrome 100.0 4.6E-64 1.6E-68 491.0 30.6 405 45-523 8-417 (417)
28 1jfb_A Nitric-oxide reductase 100.0 5E-63 1.7E-67 481.6 33.1 376 38-495 2-381 (404)
29 3b98_A Prostaglandin I2 syntha 100.0 1.7E-64 5.7E-69 504.1 21.0 445 33-523 14-472 (475)
30 1ued_A P450 OXYC, P450 monooxy 100.0 1.3E-62 4.6E-67 477.7 31.5 387 36-518 9-406 (406)
31 1n97_A CYP175A1; electron tran 100.0 2.4E-64 8.3E-69 487.7 18.3 385 40-522 2-387 (389)
32 3awm_A Fatty acid alpha-hydrox 100.0 1.5E-62 5.1E-67 480.0 30.8 405 39-521 4-413 (415)
33 1cpt_A Cytochrome P450-TERP; o 100.0 1.7E-62 5.7E-67 480.8 26.6 409 36-521 5-428 (428)
34 2zbx_A Cytochrome P450-SU1; be 100.0 6.2E-61 2.1E-65 466.9 35.3 394 36-519 4-407 (412)
35 3aba_A Cytochrome P450; oxidor 100.0 2.8E-61 9.7E-66 467.9 30.7 379 58-522 18-403 (403)
36 3a4g_A Vitamin D hydroxylase; 100.0 4.8E-61 1.6E-65 466.8 29.6 380 58-523 19-403 (411)
37 1s1f_A Putative cytochrome P45 100.0 7E-61 2.4E-65 465.6 29.7 391 36-519 7-405 (406)
38 2jjn_A Cytochrome P450 113A1; 100.0 3.4E-61 1.2E-65 468.9 26.5 395 29-522 11-407 (411)
39 2zwu_A Camphor 5-monooxygenase 100.0 2.7E-61 9.3E-66 468.8 25.4 396 32-522 6-411 (415)
40 3ejb_B Biotin biosynthesis cyt 100.0 3.2E-60 1.1E-64 461.8 31.0 383 59-523 13-398 (404)
41 3abb_A CYP105D6, cytochrome P4 100.0 8.2E-61 2.8E-65 465.7 26.1 379 58-522 23-408 (408)
42 2dkk_A Cytochrome P450; CYP158 100.0 1.2E-60 4E-65 463.7 25.7 379 57-522 25-411 (411)
43 4fb2_A P450CIN; heme, monooxyg 100.0 1.5E-60 5E-65 462.7 26.2 373 58-522 18-394 (398)
44 3dsk_A Cytochrome P450 74A, ch 100.0 2E-61 6.9E-66 484.1 20.6 427 32-495 23-471 (495)
45 1odo_A Putative cytochrome P45 100.0 3.4E-60 1.2E-64 461.4 28.1 383 58-520 14-407 (408)
46 2y5n_A MYCG, P-450-like protei 100.0 7.6E-60 2.6E-64 458.9 29.7 376 58-518 36-417 (417)
47 2xkr_A CYP142, putative cytoch 100.0 1.4E-59 4.8E-64 455.8 31.2 376 58-522 17-395 (398)
48 2uuq_A CYP130, cytochrome P450 100.0 1.8E-60 6.3E-65 463.2 24.6 390 47-522 11-414 (414)
49 3buj_A CALO2; heme, iron, meta 100.0 5.2E-60 1.8E-64 458.7 27.5 378 59-521 13-396 (397)
50 1q5d_A P450 epoxidase; cytochr 100.0 3E-60 1E-64 463.1 25.8 383 58-523 25-418 (419)
51 3ivy_A Cytochrome P450 CYP125; 100.0 2.6E-60 9E-65 465.2 24.6 397 36-522 17-429 (433)
52 2z36_A MOXA, cytochrome P450 t 100.0 9.5E-60 3.2E-64 458.0 27.9 378 58-519 21-408 (413)
53 1z8o_A 6-deoxyerythronolide B 100.0 1.3E-59 4.5E-64 456.7 28.8 376 58-518 13-402 (404)
54 1gwi_A CYP154C1, cytochrome P4 100.0 3.4E-60 1.2E-64 461.2 23.4 382 58-522 16-410 (411)
55 3dan_A Cytochrome P450 74A2; A 100.0 2.2E-60 7.4E-65 474.2 22.4 427 33-495 5-453 (473)
56 3tyw_A Putative cytochrome P45 100.0 2.6E-59 9E-64 456.5 29.5 354 58-495 28-388 (417)
57 2wm5_A CYP124, putative cytoch 100.0 4.5E-59 1.5E-63 456.1 31.0 379 59-518 44-434 (435)
58 2z3t_A Cytochrome P450; monoxy 100.0 6.9E-60 2.3E-64 460.8 24.6 382 59-521 20-416 (425)
59 2xbk_A PIMD protein; epoxidati 100.0 8.5E-59 2.9E-63 449.2 30.6 367 58-518 25-404 (404)
60 3oo3_A OXY protein; cytochrome 100.0 9.8E-59 3.3E-63 448.2 29.3 368 58-518 11-384 (384)
61 3tkt_A Cytochrome P450; aromat 100.0 1.1E-58 3.7E-63 455.8 28.9 385 61-520 47-449 (450)
62 3nc3_A Cytochrome P450 CYPX; c 100.0 2.1E-59 7.2E-64 459.2 23.5 386 59-520 53-440 (441)
63 3oft_A Cytochrome P450, CYP101 100.0 4.6E-59 1.6E-63 452.4 25.0 370 58-519 23-395 (396)
64 3lxh_A Cytochrome P450; heme, 100.0 8.6E-59 2.9E-63 453.4 26.4 379 58-522 37-418 (421)
65 1lfk_A OXYB, P450 monooxygenas 100.0 8.1E-59 2.8E-63 450.2 25.2 366 65-517 19-397 (398)
66 3r9b_A Cytochrome P450 164A2; 100.0 6.6E-59 2.3E-63 454.6 23.6 382 58-522 28-418 (418)
67 3mgx_A Putative P450 monooxyge 100.0 1E-58 3.4E-63 450.4 24.6 375 58-521 36-415 (415)
68 1n40_A P450 MT2, cytochrome P4 100.0 4.5E-58 1.5E-62 444.3 27.3 375 58-518 15-396 (396)
69 3rwl_A Cytochrome P450 alkane 100.0 2.8E-57 9.4E-62 442.2 28.1 378 59-520 38-426 (426)
70 2wiy_A XPLA-heme, cytochrome P 100.0 2.7E-56 9.2E-61 431.3 25.7 372 60-518 21-393 (394)
71 1io7_A Cytochrome P450 CYP119; 100.0 8.6E-56 3E-60 424.3 24.7 358 62-522 2-368 (368)
72 3b4x_A 367AA long hypothetical 100.0 1.3E-55 4.4E-60 422.3 24.9 356 62-520 2-366 (367)
73 3p3o_A Cytochrome P450; monoox 100.0 1.2E-55 4.2E-60 429.9 23.7 378 58-520 32-415 (416)
74 4dnj_A Putative cytochrome P45 100.0 2E-54 6.8E-59 420.1 26.9 387 43-520 18-411 (412)
75 2rfb_A Cytochrome P450; heme, 100.0 3.6E-55 1.2E-59 415.7 21.0 319 70-495 2-323 (343)
76 4dxy_A Cytochrome P450, CYP101 100.0 1.5E-49 5E-54 384.8 27.6 374 59-518 37-413 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.2E-46 4.2E-51 355.8 1.2 338 38-517 35-380 (381)
78 3lqv_A PRE-mRNA branch site pr 67.3 27 0.00094 25.4 7.9 56 39-99 4-65 (115)
79 1s79_A Lupus LA protein; RRM, 64.6 25 0.00086 25.2 6.9 50 46-100 14-71 (103)
80 3d2w_A TAR DNA-binding protein 57.0 32 0.0011 23.8 6.2 53 40-97 8-64 (89)
81 2krb_A Eukaryotic translation 56.7 41 0.0014 22.5 7.2 38 62-99 21-65 (81)
82 2nlw_A Eukaryotic translation 53.1 59 0.002 23.2 7.5 54 44-100 16-80 (105)
83 4f25_A Polyadenylate-binding p 49.8 43 0.0015 24.5 6.2 50 46-100 8-64 (115)
84 2diu_A KIAA0430 protein; struc 49.6 47 0.0016 23.5 5.8 64 47-112 13-78 (96)
85 2mss_A Protein (musashi1); RNA 49.1 38 0.0013 22.1 5.4 40 61-100 12-60 (75)
86 2pe8_A Splicing factor 45; RRM 48.9 48 0.0016 23.9 6.1 69 40-108 5-84 (105)
87 1iqt_A AUF1, heterogeneous nuc 48.1 29 0.00099 22.7 4.6 40 61-100 12-60 (75)
88 3beg_B Splicing factor, argini 46.8 81 0.0028 22.9 7.9 59 46-109 19-80 (115)
89 2dnz_A Probable RNA-binding pr 43.4 78 0.0027 21.8 7.8 60 45-109 7-76 (95)
90 1x4c_A Splicing factor, argini 43.1 88 0.003 22.3 7.5 50 46-100 18-69 (108)
91 1x4e_A RNA binding motif, sing 41.7 63 0.0022 21.7 5.7 52 43-99 5-65 (85)
92 2kxn_B Transformer-2 protein h 40.4 1.1E+02 0.0039 22.8 8.7 52 43-99 46-106 (129)
93 3s7r_A Heterogeneous nuclear r 38.1 84 0.0029 21.1 5.9 52 45-101 13-73 (87)
94 1sjq_A Polypyrimidine tract-bi 37.9 1.1E+02 0.0038 22.0 6.6 53 42-99 15-70 (105)
95 2cqc_A Arginine/serine-rich sp 37.4 98 0.0033 21.2 7.1 56 39-99 11-75 (95)
96 2la6_A RNA-binding protein FUS 36.9 1E+02 0.0036 21.4 7.0 55 40-99 10-81 (99)
97 2jrs_A RNA-binding protein 39; 36.3 1.2E+02 0.004 21.7 7.8 49 46-99 29-86 (108)
98 2a3j_A U1 small nuclear ribonu 36.1 1.2E+02 0.0043 22.6 6.9 62 46-108 32-100 (127)
99 1m46_B IQ4, IQ4 motif from MYO 35.6 31 0.001 16.6 2.0 12 339-350 8-19 (26)
100 3ns6_A Eukaryotic translation 35.3 92 0.0032 21.8 5.9 56 44-99 7-72 (100)
101 3s8s_A Histone-lysine N-methyl 34.7 1.1E+02 0.0037 22.1 6.2 49 46-99 9-66 (110)
102 2dgv_A HnRNP M, heterogeneous 34.5 1.1E+02 0.0037 20.8 7.8 59 45-108 10-76 (92)
103 3ue2_A Poly(U)-binding-splicin 33.6 1.1E+02 0.0038 22.5 6.1 68 42-109 19-100 (118)
104 1whx_A Hypothetical protein ri 32.7 1.4E+02 0.0047 21.5 7.1 60 46-110 13-76 (111)
105 3zzy_A Polypyrimidine tract-bi 32.6 1E+02 0.0035 23.2 5.8 51 44-99 29-84 (130)
106 1whw_A Hypothetical protein ri 32.6 1.2E+02 0.0042 20.9 6.8 50 45-99 10-68 (99)
107 3ulh_A THO complex subunit 4; 32.1 1.2E+02 0.0041 21.4 6.2 51 45-100 31-89 (107)
108 2d9o_A DNAJ (HSP40) homolog, s 31.9 1.4E+02 0.0047 21.2 6.5 40 61-100 30-73 (100)
109 2ywk_A Putative RNA-binding pr 31.5 1.2E+02 0.004 20.8 5.9 50 45-99 18-75 (95)
110 2jwn_A Embryonic polyadenylate 31.3 1E+02 0.0034 22.6 5.8 51 47-102 40-99 (124)
111 3bs9_A Nucleolysin TIA-1 isofo 30.6 1.2E+02 0.0041 20.2 6.0 50 45-99 8-66 (87)
112 4fxv_A ELAV-like protein 1; RN 30.4 1.3E+02 0.0045 21.0 6.0 49 46-99 22-79 (99)
113 2kvi_A Nuclear polyadenylated 30.3 1.3E+02 0.0046 20.6 7.0 57 46-107 13-72 (96)
114 2wbr_A GW182, gawky, LD47780P; 30.3 1.4E+02 0.0047 20.8 6.8 50 44-98 8-60 (89)
115 2dnm_A SRP46 splicing factor; 30.1 1.4E+02 0.0048 20.8 7.1 57 45-106 15-81 (103)
116 2cq4_A RNA binding motif prote 29.8 99 0.0034 22.2 5.4 51 47-102 29-88 (114)
117 2jvr_A Nucleolar protein 3; RN 29.7 1.3E+02 0.0043 21.9 5.8 51 45-100 30-86 (111)
118 2bz2_A Negative elongation fac 29.7 1.1E+02 0.0038 22.5 5.7 54 45-105 41-98 (121)
119 3md1_A Nuclear and cytoplasmic 29.6 1.2E+02 0.0042 19.9 5.6 48 47-99 5-61 (83)
120 1x5p_A Negative elongation fac 29.6 1.4E+02 0.0048 20.6 7.8 52 42-100 14-68 (97)
121 2dgs_A DAZ-associated protein 29.1 1.4E+02 0.0049 20.6 8.4 57 45-106 12-77 (99)
122 3v4m_A Splicing factor U2AF 65 28.9 1.4E+02 0.0049 21.2 6.0 48 61-108 28-87 (105)
123 2cpi_A CCR4-NOT transcription 28.7 67 0.0023 23.1 4.2 57 45-106 17-89 (111)
124 1x5u_A Splicing factor 3B subu 27.6 1.6E+02 0.0054 20.6 8.4 51 45-100 17-76 (105)
125 2cq3_A RNA-binding protein 9; 27.6 1.6E+02 0.0054 20.5 8.5 52 43-99 15-73 (103)
126 3ucg_A Polyadenylate-binding p 27.3 1.4E+02 0.0049 19.9 5.9 51 47-102 10-69 (89)
127 2ytc_A PRE-mRNA-splicing facto 27.1 1.4E+02 0.0048 19.8 7.8 50 45-99 14-66 (85)
128 2rs2_A Musashi-1, RNA-binding 26.9 1.5E+02 0.0052 21.1 5.9 52 45-101 27-87 (109)
129 1wi8_A EIF-4B, eukaryotic tran 26.8 1.6E+02 0.0056 20.5 7.0 61 39-105 11-81 (104)
130 1sjr_A Polypyrimidine tract-bi 26.7 1.9E+02 0.0064 22.9 6.6 48 47-99 50-102 (164)
131 2hvz_A Splicing factor, argini 26.4 1.5E+02 0.0052 20.5 5.8 58 47-109 4-66 (101)
132 3s6e_A RNA-binding protein 39; 26.2 70 0.0024 23.4 3.9 70 39-108 3-83 (114)
133 1use_A VAsp, vasodilator-stimu 26.2 98 0.0033 18.2 3.5 29 338-380 14-42 (45)
134 3mdf_A Peptidyl-prolyl CIS-tra 25.5 1.5E+02 0.0051 19.6 7.4 52 43-99 7-67 (85)
135 3ex7_B RNA-binding protein 8A; 25.4 2E+02 0.0068 21.0 7.9 60 45-109 24-93 (126)
136 1p1t_A Cleavage stimulation fa 25.4 1.5E+02 0.0052 20.6 5.7 49 46-99 11-68 (104)
137 3arc_T Photosystem II reaction 25.4 40 0.0014 18.1 1.6 6 1-6 1-6 (32)
138 1p27_B RNA-binding protein 8A; 25.2 1.8E+02 0.0061 20.4 7.4 49 46-99 26-83 (106)
139 1uaw_A Mouse-musashi-1; RNP-ty 25.1 1.3E+02 0.0044 19.4 4.9 50 47-101 4-62 (77)
140 2x1f_A MRNA 3'-END-processing 25.1 1.7E+02 0.0058 20.0 6.8 49 46-99 5-62 (96)
141 2d9p_A Polyadenylate-binding p 24.9 1.8E+02 0.0061 20.3 7.7 61 40-105 12-80 (103)
142 2cpf_A RNA binding motif prote 24.4 1.8E+02 0.006 20.0 6.7 50 46-100 8-69 (98)
143 2div_A TRNA selenocysteine ass 24.4 1.8E+02 0.006 20.0 6.6 53 42-99 8-70 (99)
144 2e5h_A Zinc finger CCHC-type a 24.4 1.7E+02 0.0058 19.8 7.6 52 43-99 16-76 (94)
145 2ad9_A Polypyrimidine tract-bi 24.3 1.9E+02 0.0064 21.3 5.9 51 44-99 32-85 (119)
146 2dh8_A DAZ-associated protein 24.0 1.9E+02 0.0064 20.2 6.3 56 45-105 18-82 (105)
147 1jmt_A Splicing factor U2AF 35 23.9 1.7E+02 0.0058 20.7 5.6 45 63-107 41-95 (104)
148 2voo_A Lupus LA protein; RNA-b 23.9 1.2E+02 0.0042 24.6 5.4 50 47-101 113-170 (193)
149 1x4d_A Matrin 3; structural ge 23.6 2E+02 0.0068 20.4 6.6 54 41-99 13-70 (102)
150 2adc_A Polypyrimidine tract-bi 23.4 2.6E+02 0.0087 23.2 7.6 59 46-108 37-100 (229)
151 2dhg_A TRNA selenocysteine ass 22.9 2E+02 0.0067 20.0 8.8 55 40-99 6-69 (104)
152 2cqb_A Peptidyl-prolyl CIS-tra 22.8 1.9E+02 0.0066 20.0 5.8 53 42-99 11-72 (102)
153 1rk8_A CG8781-PA, CG8781-PA pr 22.8 2.2E+02 0.0076 22.1 6.7 49 46-99 75-132 (165)
154 3n9u_C Cleavage and polyadenyl 22.8 2E+02 0.0069 22.3 6.3 49 47-100 59-118 (156)
155 1oo0_B CG8781-PA, drosophila Y 22.3 2.1E+02 0.0072 20.2 7.3 49 46-99 29-86 (110)
156 2dgo_A Cytotoxic granule-assoc 22.3 2.2E+02 0.0074 20.3 6.8 54 42-100 14-76 (115)
157 2do4_A Squamous cell carcinoma 22.2 2E+02 0.0068 19.8 7.9 51 45-100 19-77 (100)
158 3fgx_A Rbstp2171; structural g 22.1 52 0.0018 24.0 2.3 16 65-80 10-25 (114)
159 2qfj_A FBP-interacting repress 21.8 3.2E+02 0.011 22.1 7.9 49 46-99 31-88 (216)
160 2err_A Ataxin-2-binding protei 21.6 2.1E+02 0.007 20.3 5.7 49 46-99 32-87 (109)
161 1x4h_A RNA-binding protein 28; 21.5 2.2E+02 0.0075 20.1 8.4 53 43-100 15-76 (111)
162 1x4b_A Heterogeneous nuclear r 21.5 1.2E+02 0.0042 21.8 4.6 50 46-100 30-88 (116)
163 2lea_A Serine/arginine-rich sp 21.3 2.5E+02 0.0086 20.9 6.4 49 46-99 50-107 (135)
164 3ctr_A Poly(A)-specific ribonu 21.0 1.7E+02 0.0059 20.8 4.7 39 61-99 18-57 (101)
165 1whv_A Poly(A)-specific ribonu 20.9 2.2E+02 0.0076 20.2 5.2 40 60-99 27-67 (100)
166 2jvo_A Nucleolar protein 3; nu 20.8 2.2E+02 0.0075 20.2 5.7 49 46-99 34-83 (108)
167 2cq1_A PTB-like protein L; RRM 20.6 2.3E+02 0.0078 19.9 6.6 50 45-99 17-69 (101)
168 4a8x_A RNA-binding protein wit 20.4 2E+02 0.0067 19.1 6.8 48 47-99 8-65 (88)
169 2fy1_A RNA-binding motif prote 20.3 2.5E+02 0.0085 20.2 6.5 59 45-108 9-76 (116)
170 2i2y_A Fusion protein consists 20.3 2.9E+02 0.0098 20.9 9.5 50 45-99 75-128 (150)
171 2dnh_A Bruno-like 5, RNA bindi 20.2 2.3E+02 0.0077 19.7 7.0 50 45-99 17-74 (105)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=1.3e-77 Score=599.83 Aligned_cols=463 Identities=21% Similarity=0.322 Sum_probs=353.8
Q ss_pred CcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCC
Q 038386 31 SEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPK 110 (523)
Q Consensus 31 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~ 110 (523)
+++++.++||||+++|++||++++. .++.+..+.+|++|||+||++++|+.++|+|+||+++++|+.+++..|+.|+.
T Consensus 4 ~~ss~~kLPPGP~~lP~iGn~~~~~--~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~ 81 (479)
T 3tbg_A 4 KTSSKGKLPPGPLPLPGLGNLLHVD--FQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPP 81 (479)
T ss_dssp -----CCCCCCSCCBTTTBTGGGCC--TTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCC
T ss_pred CCCCCCCCCCCCCCcCcccchHhhc--CCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCc
Confidence 3444457899999999999999883 45788899999999999999999999999999999999999888889988887
Q ss_pred CCcccccce-eeccccceeeCcCCchhHHHhhhhccccccccccchhh-hcchhhHHHHHHHHHHHHHHhhhcCCCeeeh
Q 038386 111 STSIADDLI-FANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKF-NHSHLRGRVLEKLICELKREYCECRGDGVYV 188 (523)
Q Consensus 111 ~~~~~~~~~-~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~ 188 (523)
..... .+ .+....++++..+|+.|+++|+.+. +.|+...+.. .+...+......+...+... .++.+|+
T Consensus 82 ~~~~~--~~~~~~~~~~~~~~~~g~~w~~~R~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~ 152 (479)
T 3tbg_A 82 VPITQ--ILGFGPRSQGVFLARYGPAWREQRRFSV---STLRNLGLGKKSLEQWVTEEAACLCAAFANH----SGRPFRP 152 (479)
T ss_dssp CGGGG--GGTCBTTBCCSTTCCSSHHHHHHHHHHH---HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT----TTCCBCT
T ss_pred hHHHH--HhccCCCCCceeeCCCCHHHHHHHHHHH---HHhcchhhhHHHHHHHHHHHHHHHHHHHHhc----cCCcccH
Confidence 65432 21 2223346667778999999999998 8887766541 23344445555555544332 4678999
Q ss_pred hHHHHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHH
Q 038386 189 CEHFRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFV 264 (523)
Q Consensus 189 ~~~~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~ 264 (523)
.+++..+++++++.++||.+++ +................... ......+|++..+ ....++.....+.....+.
T Consensus 153 ~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (479)
T 3tbg_A 153 NGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLD 230 (479)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999884 23333333333332222221 1222333443332 2223444555566666677
Q ss_pred HHHHHHHHHHhhhhhccCCccchHHHHHHhh---CCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHH
Q 038386 265 GLVRDRKKIKQENEERDIDSESYVDTLIELR---LPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQ 341 (523)
Q Consensus 265 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~ 341 (523)
+.+.+..+...... ...|+++.++... ..+....++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus 231 ~~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q 306 (479)
T 3tbg_A 231 ELLTEHRMTWDPAQ----PPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQ 306 (479)
T ss_dssp HHHHHHHHHCCTTS----CCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHhhhccc----ccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHH
Confidence 77766665542222 4455665554332 2234567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCC
Q 038386 342 AKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDP 421 (523)
Q Consensus 342 ~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~ 421 (523)
+|||+||+.+++.+ ..++.+++.+||||+|||+||||++|+++.. .+|.+.+|++++||.|||||.|.++.+++||||
T Consensus 307 ~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~-~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~ 384 (479)
T 3tbg_A 307 RRVQQEIDDVIGQV-RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLG-VTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDE 384 (479)
T ss_dssp HHHHHHHHHHTCSS-SCCCHHHHTTCHHHHHHHHHHHHHHCSSTTC-CCEECSSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred HHHHHHHHHHHhhc-cccchhhhccccccccceeeecccccccccc-ceeecCCCceECCEEecCCCeeeechhhhcCCh
Confidence 99999999998765 7789999999999999999999999999988 777889999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCC--C
Q 038386 422 NVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDV--D 499 (523)
Q Consensus 422 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~ 499 (523)
++|+||++|+||||++.+.. ..++..|+|||+|+|.|+|++||++|+++++|+||++|+|++.++.. .
T Consensus 385 ~~~~dP~~F~PeRfl~~~~~----------~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~ 454 (479)
T 3tbg_A 385 AVWEKPFRFHPEHFLDAQGH----------FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPS 454 (479)
T ss_dssp TTSSSTTSCCGGGGBCTTCC----------BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCC
T ss_pred hhCCCccccCccccCCCCcc----------cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCcc
Confidence 99999999999999976421 11347899999999999999999999999999999999999987322 2
Q ss_pred cccccceEEeecCceeEEEeecCC
Q 038386 500 LSEKAEFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~r~~ 523 (523)
.....+++..| .+++|+++||+.
T Consensus 455 ~~~~~~~~~~P-~~~~v~~~pRs~ 477 (479)
T 3tbg_A 455 HHGVFAFLVSP-SPYELCAVPRHH 477 (479)
T ss_dssp SCEEESSSEEE-CCCCBEEEEC--
T ss_pred ccccceeeecC-CCeEEEEEECCC
Confidence 23334455565 589999999973
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=1.8e-77 Score=600.21 Aligned_cols=460 Identities=22% Similarity=0.384 Sum_probs=367.7
Q ss_pred CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
...++||||+++|++||++++.+ .++++..+.+|+++||+||++++|+.++|+|+||+.+++++.+++..|++++....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~-~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPR-HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp -------CCBCCCEEEEESSCTT-SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCC-CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34578999999999999998743 34678899999999999999999999999999999999999998889999887643
Q ss_pred ccccceeeccccceeeCcCCchhHHHhhhhccccccccc--cchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH
Q 038386 114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHS--SSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH 191 (523)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~--~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~ 191 (523)
. ..++.++.+++++.+|+.|+++|+++. +.|+. ..+. .+.+.+.+++..+++.+... .++++|+...
T Consensus 84 ~---~~~~~~~~gl~~~~~g~~wr~~Rr~~~---~~f~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~ 152 (494)
T 3swz_A 84 L---DIASNNRKGIAFADSGAHWQLHRRLAM---ATFALFKDGDQ-KLEKIICQEISTLCDMLATH----NGQSIDISFP 152 (494)
T ss_dssp H---HHHTTTTCSSSSSCSSHHHHHHHHHHH---HHTTTTSSSTT-CHHHHHHHHHHHHHHHHHHT----TTEEECCHHH
T ss_pred H---HHhccCCCCeEeCCCCHHHHHHHHHHH---HHHHHhcchHH-HHHHHHHHHHHHHHHHHHHc----CCCcccHHHH
Confidence 2 334444457777767999999999999 88874 4567 78999999999999998763 3678999999
Q ss_pred HHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 038386 192 FRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRD 269 (523)
Q Consensus 192 ~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 269 (523)
+..+++++++.++||.+++ ++....+......+........+.+++|++..++ ....+...+..+.+.+++.+++++
T Consensus 153 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~ 231 (494)
T 3swz_A 153 VFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILEN 231 (494)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999884 3333344444444443333344556678776542 222345556666777777777776
Q ss_pred HHHHHhhhhhccCCccchHHHHHHhhCCC---------CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHH
Q 038386 270 RKKIKQENEERDIDSESYVDTLIELRLPS---------DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKI 340 (523)
Q Consensus 270 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~ 340 (523)
+++... .....|+++.|++...+. .+..+++++++.++.++++||+|||+++++|++++|++||++
T Consensus 232 ~~~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~ 306 (494)
T 3swz_A 232 YKEKFR-----SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQV 306 (494)
T ss_dssp HTTTCC-----TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHhhc-----ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHH
Confidence 654321 114568999999865321 224589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCC
Q 038386 341 QAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRD 420 (523)
Q Consensus 341 ~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d 420 (523)
|+++++||+++++.+ ..++.+++.+||||+|||+|+||++|+++.. ++|.+++|++++||.|||||.|+++.+++|||
T Consensus 307 q~kl~~Ei~~v~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 384 (494)
T 3swz_A 307 KKKLYEEIDQNVGFS-RTPTISDRNRLLLLEATIREVLRLRPVAPML-IPHKANVDSSIGEFAVDKGTEVIINLWALHHN 384 (494)
T ss_dssp HHHHHHHHHHHTCSS-SCCCGGGGGTCHHHHHHHHHHHHHSCSSTTC-SCEECSSSEEETTEEECTTCEEEECHHHHHHC
T ss_pred HHHHHHHHHHhcCCC-CCCCHHHHhcCHHHHHHHHHHHHhcCCcccc-cceecCCCceECCEEeCCCCEEEEehHHhhCC
Confidence 999999999999875 7789999999999999999999999999986 79999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC-C-C
Q 038386 421 PNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE-D-V 498 (523)
Q Consensus 421 ~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~-~-~ 498 (523)
|++|+||++|+||||++.+... . ...+..|+|||.|+|.|+|++||++|++++++.||++|+|++.++ . +
T Consensus 385 ~~~~~dp~~F~PeRfl~~~~~~-------~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~ 456 (494)
T 3swz_A 385 EKEWHQPDQFMPERFLNPAGTQ-------L-ISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLP 456 (494)
T ss_dssp TTTSSSTTSCCGGGGBCTTSSS-------B-CCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCC
T ss_pred cccCCCcccCCcccccCCCCcc-------c-cCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCC
Confidence 9999999999999999764210 0 112367999999999999999999999999999999999998862 2 2
Q ss_pred CcccccceEEeecCceeEEEeecC
Q 038386 499 DLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
+.....+.+ ..+.+++|++++|+
T Consensus 457 ~~~~~~~~~-~~p~~~~v~~~~R~ 479 (494)
T 3swz_A 457 SLEGIPKVV-FLIDSFKVKIKVRQ 479 (494)
T ss_dssp CCSCEESSS-EECCCCCEEEEECH
T ss_pred CCCCcccee-ecCCCcEEEEEEcC
Confidence 233323344 44679999999995
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-77 Score=602.76 Aligned_cols=464 Identities=22% Similarity=0.346 Sum_probs=356.0
Q ss_pred cCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386 32 EISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS 111 (523)
Q Consensus 32 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~ 111 (523)
+.++.+.||||+++|++||++.+ .++++..+.+|+++||+||++++|+.++|+|+||+.+++|+.++...|.+++..
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~ 80 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAV---GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSF 80 (507)
T ss_dssp ---------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCC
T ss_pred ccCCCCCCcCCCCCCeeCchhhc---CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcc
Confidence 34456789999999999999988 357899999999999999999999999999999999999998888889888876
Q ss_pred CcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhh-----hcchhhHHHHHHHHHHHHHHhhhcCCCee
Q 038386 112 TSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKF-----NHSHLRGRVLEKLICELKREYCECRGDGV 186 (523)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~~v 186 (523)
.... .+ . ++.++++..+|+.|+++|++++ +.|+...... .+.+.+.++++++++.+.+... +++.+
T Consensus 81 ~~~~--~~-~-~g~~l~~~~~g~~w~~~R~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~--~~~~v 151 (507)
T 3pm0_A 81 ASFR--VV-S-GGRSMAFGHYSEHWKVQRRAAH---SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSA--DGAFL 151 (507)
T ss_dssp HHHH--HG-G-GGTCSSSSCSSHHHHHHHHHHH---HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTG--GGCCB
T ss_pred hHHH--hh-c-CCCceEECCCChHHHHHHHHHH---HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcc--cCCCc
Confidence 5432 22 2 2346666668999999999998 8776544430 3888999999999999987654 46789
Q ss_pred ehhHHHHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhH--HHHHHHHHhHHhHHHH
Q 038386 187 YVCEHFRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFR--KRWKKFLGIIRSREDV 262 (523)
Q Consensus 187 d~~~~~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~--~~~~~~~~~~~~~~~~ 262 (523)
|+.+++..+++++++.++||.+++ ++....+......+........+..++|++..+... ..+++..+..+.+.++
T Consensus 152 d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~ 231 (507)
T 3pm0_A 152 DPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNF 231 (507)
T ss_dssp CCHHHHHHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999984 333334444444444443333445567776554321 2356677778888889
Q ss_pred HHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCC-------CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 038386 263 FVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSD-------RKVLEESEIVSLSDEFISHGSDTIATALHWVMANVV 335 (523)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~ 335 (523)
+.+.++++++....+. ...|+++.+++....+. +..++++++..++..+++||+|||+++++|++++|+
T Consensus 232 ~~~~i~~~~~~~~~~~----~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~ 307 (507)
T 3pm0_A 232 ILDKFLRHCESLRPGA----APRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFT 307 (507)
T ss_dssp HHHHHHHHHHHCCTTC----CCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccc----CCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 9999988877643211 45789999996543211 125999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccc
Q 038386 336 KYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVA 415 (523)
Q Consensus 336 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~ 415 (523)
+||++|++||+||+++++.+ ..++.+++.+||||+|||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+
T Consensus 308 ~~P~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~ 385 (507)
T 3pm0_A 308 RYPDVQTRVQAELDQVVGRD-RLPCMGDQPNLPYVLAFLYEAMRFSSFVPVT-IPHATTANTSVLGYHIPKDTVVFVNQW 385 (507)
T ss_dssp HCHHHHHHHHHHHHHHTCTT-SCCCGGGGGGCHHHHHHHHHHHHHHCSSCBC-SCEECSSCEEETTEEECTTCEEEEBSH
T ss_pred hCHHHHHHHHHHHHHhcCCC-CCCChhhcccChHHHHHHHHHHhcCCCcccC-CCccccCCceEcCEEECCCCEEEeChH
Confidence 99999999999999998765 6789999999999999999999999999986 699999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC
Q 038386 416 DMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD 495 (523)
Q Consensus 416 ~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~ 495 (523)
++||||++|+||++|+||||++.+.. .....+..|+|||.|+|.|+|++||.+|+++++++||++|+|++.+
T Consensus 386 ~~~~d~~~~~dp~~F~PeRfl~~~~~--------~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~ 457 (507)
T 3pm0_A 386 SVNHDPLKWPNPENFDPARFLDKDGL--------INKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANP 457 (507)
T ss_dssp HHHSCTTTCSSSSSCCGGGGBCTTSC--------BCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECT
T ss_pred HHhCCcccCCCcCccCCCcccCCCCc--------ccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCC
Confidence 99999999999999999999976411 1111235899999999999999999999999999999999999886
Q ss_pred -CCCCcccccceEEeecCceeEEEeecC
Q 038386 496 -EDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 496 -~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
.+.+.....+++..| .+++|++++|+
T Consensus 458 ~~~~~~~~~~~~~~~p-~~~~v~~~~R~ 484 (507)
T 3pm0_A 458 NEPAKMNFSYGLTIKP-KSFKVNVTLRE 484 (507)
T ss_dssp TCCSCCCEEESSSEEE-CSCCEEEEESS
T ss_pred CCCCCCCCCCCccccC-CCcEEEEEEcc
Confidence 333333333455555 46899999996
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=5.4e-76 Score=587.43 Aligned_cols=457 Identities=22% Similarity=0.345 Sum_probs=363.7
Q ss_pred cCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386 32 EISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS 111 (523)
Q Consensus 32 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~ 111 (523)
..++.+.||||+++|++||++++ ..++++.++.+|+++||+||++++|+.++|+|+||+.+++|+.++...|++++..
T Consensus 5 ~~~~~~lpPgP~~~PliG~~~~~--~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~ 82 (476)
T 3e6i_A 5 TSSKGKLPPGPFPLPIIGNLFQL--ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDL 82 (476)
T ss_dssp -----CCCCCCCCBTTTBTGGGC--CTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCC
T ss_pred ccCCCCCCcCCCCcccccChhhh--ccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCC
Confidence 34456789999999999999987 3567899999999999999999999999999999999999998888888888766
Q ss_pred CcccccceeeccccceeeCcCCchhHHHhhhhccccccccccch--hhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehh
Q 038386 112 TSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSI--KFNHSHLRGRVLEKLICELKREYCECRGDGVYVC 189 (523)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~ 189 (523)
..+. .+.+ + ++++. +|+.|+++|+++. +.|+...+ . .+.+.+.++++.+++.+.+. .++++|+.
T Consensus 83 ~~~~--~~~~-~--~l~~~-~g~~w~~~Rr~~~---~~l~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~~d~~ 148 (476)
T 3e6i_A 83 PAFH--AHRD-R--GIIFN-NGPTWKDIRRFSL---TTLRNYGMGKQ-GNESRIQREAHFLLEALRKT----QGQPFDPT 148 (476)
T ss_dssp GGGG--GGTT-S--SSTTC-CSTTHHHHHHHHH---HHHHHTC-CCS-HHHHHHHHHHHHHHHHHHTT----TTSCBCTH
T ss_pred chhh--eecC-C--CEEec-CCcHHHHHHHHHH---HHHHhcCCCch-HHHHHHHHHHHHHHHHHHHh----CCCCcChH
Confidence 5433 3332 2 55554 7999999999987 77765443 3 46788899999999998653 36789999
Q ss_pred HHHHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHH
Q 038386 190 EHFRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVG 265 (523)
Q Consensus 190 ~~~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (523)
+++..+++++++.++||.+++ ++....+.......+..... ..+...+|.+..+++ ..+++..+..+.+.+++.+
T Consensus 149 ~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp-~~~~~~~~~~~~~~~~~~~ 227 (476)
T 3e6i_A 149 FLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP-GSHRKVIKNVAEVKEYVSE 227 (476)
T ss_dssp HHHTHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC-SHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999884 33333444444433332221 223345562222222 2345666778888899999
Q ss_pred HHHHHHHHHhhhhhccCCccchHHHHHHhhCCC---CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHH
Q 038386 266 LVRDRKKIKQENEERDIDSESYVDTLIELRLPS---DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQA 342 (523)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 342 (523)
.|+++++....+ ...|+++.++....++ .+..++++++++++.++++||+|||+++++|++++|++||++|+
T Consensus 228 ~i~~~~~~~~~~-----~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~ 302 (476)
T 3e6i_A 228 RVKEHHQSLDPN-----CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEE 302 (476)
T ss_dssp HHHHHHHTCCTT-----SCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHhhcCCCC-----CCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHH
Confidence 998887653211 3468999998765432 23458999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCC
Q 038386 343 KILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPN 422 (523)
Q Consensus 343 ~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~ 422 (523)
+|++||+++++.+ ..++.+++++||||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||+
T Consensus 303 ~l~~Ei~~~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~ 380 (476)
T 3e6i_A 303 KLHEEIDRVIGPS-RIPAIKDRQEMPYMDAVVHEIQRFITLVPSN-LPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQ 380 (476)
T ss_dssp HHHHHHHHHTTTT-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTC-SCEECSSCEEETTEEECTTCEEEECSHHHHTCTT
T ss_pred HHHHHHHHhcCCC-CCCChhhccCCchHHHHHHHHHHhccCCCcc-ccccCCCCeeEcCEEeCCCCEEEechHHhhCCcc
Confidence 9999999998765 6789999999999999999999999999975 6999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC--CCCCc
Q 038386 423 VWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD--EDVDL 500 (523)
Q Consensus 423 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~--~~~~~ 500 (523)
+|+||++|+||||++.+.. ...+..|+|||.|+|.|+|++||++|+++++++|+++|+|++.. ..+++
T Consensus 381 ~~~~p~~F~PeR~l~~~~~----------~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~ 450 (476)
T 3e6i_A 381 EFPDPEKFKPEHFLNENGK----------FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDL 450 (476)
T ss_dssp TSSSTTSCCGGGGBCTTSS----------BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCC
T ss_pred cCCCccccCchhhcCCCCC----------ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCC
Confidence 9999999999999976311 11246799999999999999999999999999999999999854 33334
Q ss_pred ccc-cceEEeecCceeEEEeecCC
Q 038386 501 SEK-AEFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 501 ~~~-~~~~~~~~~~~~~~~~~r~~ 523 (523)
... .+++ ..+.+++|++++|++
T Consensus 451 ~~~~~~~~-~~p~~~~~~~~~R~~ 473 (476)
T 3e6i_A 451 SPIHIGFG-CIPPRYKLCVIPRSH 473 (476)
T ss_dssp SCSEESSS-EECCCCCEEEEECC-
T ss_pred CcccCccc-cCCCCeEEEEEeccc
Confidence 332 3344 445789999999974
No 5
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.4e-76 Score=595.62 Aligned_cols=448 Identities=19% Similarity=0.277 Sum_probs=360.7
Q ss_pred CCCCCCCCCccceeeecccccCC-CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 35 TQNLPPGPPRFHLLAHLLWHRKP-LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 35 ~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
+.+.||||+++|++||++++... ....+..+.+|+++||+||++++|+.++|+|+||+.+++++++ ..|+.++....
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~ 120 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL 120 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence 45679999999999999887431 1245678899999999999999999999999999999999943 46776655432
Q ss_pred ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH
Q 038386 114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR 193 (523)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~ 193 (523)
.. ...+..+.++++..+|+.|+++|++++ +.|+...++ .+.+.+.+++.++++.+.+..+ .++.+|+.+++.
T Consensus 121 ~~--~~~~~~~~~~~~~~~g~~w~~~Rr~~~---~~f~~~~l~-~~~~~~~~~~~~~l~~l~~~~~--~~~~vdl~~~~~ 192 (503)
T 3s79_A 121 GL--QCIGMHEKGIIFNNNPELWKTTRPFFM---KALSGPGLV-RMVTVCAESLKTHLDRLEEVTN--ESGYVDVLTLLR 192 (503)
T ss_dssp HH--HHHTCTTSSSTTCCCHHHHHHHHHHHH---HHTSTHHHH-HHHHHHHHHHHHHHTTGGGTBC--TTSCBCHHHHHH
T ss_pred hh--hhhccCCCceeeCCCccHHHHHHHhhh---HhhChHHHH-HHHHHHHHHHHHHHHHHHHHhc--CCCeEcHHHHHH
Confidence 22 222323346666678999999999999 999999999 9999999999999988876543 467899999999
Q ss_pred HHHHHHhhhhhccCCcchhH-HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386 194 YAIFYLLVKMCFGNNVEEQE-IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK 272 (523)
Q Consensus 194 ~~~~~v~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 272 (523)
.+++++++.++||.++++.. .+.+......+........+...+|++ .++..+..+.+.+++.++|+++++
T Consensus 193 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~ 264 (503)
T 3s79_A 193 RVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWL--------YKKYEKSVKDLKDAIEVLIAEKRR 264 (503)
T ss_dssp HHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHHHHHSGGG--------THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHHHhhcchh--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986432 222323322222211101111112221 245566778888999999999887
Q ss_pred HHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Q 038386 273 IKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVV 352 (523)
Q Consensus 273 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~ 352 (523)
....++. ..+..|+++.+++.. +++.++++++++++.++++||+|||+++++|++++|++||++|+++++||++++
T Consensus 265 ~~~~~~~-~~~~~d~l~~ll~~~---~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~ 340 (503)
T 3s79_A 265 RISTEEK-LEECMDFATELILAE---KRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI 340 (503)
T ss_dssp HHHTCTT-TTTTCCHHHHHHHHH---HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred Hhhcccc-cchHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence 7643221 113459999999876 445799999999999999999999999999999999999999999999999999
Q ss_pred hcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCC
Q 038386 353 EQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKP 432 (523)
Q Consensus 353 ~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P 432 (523)
++ ..++.++++++|||+|||+|+||++|+++.. .|.+++|++++||.|||||.|.++.+++|+| ++|+||++|+|
T Consensus 341 ~~--~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~P 415 (503)
T 3s79_A 341 GE--RDIKIDDIQKLKVMENFIYESMRYQPVVDLV--MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTL 415 (503)
T ss_dssp TT--SCCCHHHHTTCHHHHHHHHHHHHHSCSSCCE--EEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCG
T ss_pred CC--CCCCHHHHhcCHHHHHHHHhhhccCCCcccc--cccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCCh
Confidence 83 6899999999999999999999999999987 7999999999999999999999999999998 99999999999
Q ss_pred CcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC-C-CCcccccceEEee
Q 038386 433 ERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE-D-VDLSEKAEFTIEM 510 (523)
Q Consensus 433 ~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~-~-~~~~~~~~~~~~~ 510 (523)
|||++.. ....|+|||+|+|.|+|++||.+|+++++++|+++|+|++.++ + .+.....+++..|
T Consensus 416 eRf~~~~--------------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p 481 (503)
T 3s79_A 416 ENFAKNV--------------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHP 481 (503)
T ss_dssp GGGSSCC--------------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEE
T ss_pred hhcCCCC--------------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecC
Confidence 9999652 1357999999999999999999999999999999999999872 2 2334445677788
Q ss_pred cCc---eeEEEeecCC
Q 038386 511 KNP---LHARISPRVN 523 (523)
Q Consensus 511 ~~~---~~~~~~~r~~ 523 (523)
+.+ ++|++++|+.
T Consensus 482 ~~~~~~~~v~~~~R~~ 497 (503)
T 3s79_A 482 DETKNMLEMIFTPRNS 497 (503)
T ss_dssp CTTSCCCCEEEEECC-
T ss_pred CCccceeeEEeccCCc
Confidence 775 9999999973
No 6
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=1.8e-76 Score=592.05 Aligned_cols=454 Identities=21% Similarity=0.316 Sum_probs=366.5
Q ss_pred CcCCCCCCCCCCCccceeeecccccCC--CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccC
Q 038386 31 SEISTQNLPPGPPRFHLLAHLLWHRKP--LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADR 108 (523)
Q Consensus 31 ~~~~~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~ 108 (523)
...++++.+|||+++|++||++++... .++++..+.+|+++||+||++++|+.+.|+++||+.+++|+.+ ...|.++
T Consensus 18 ~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~-~~~~~~r 96 (482)
T 3k9v_A 18 GETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRT-ESAHPQR 96 (482)
T ss_dssp -CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHT-CCSSCCC
T ss_pred cccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHh-cCCCCCC
Confidence 445667789999999999999887532 3568899999999999999999999999999999999999976 4577777
Q ss_pred CCCCcccc-cceeeccccceeeCcCCchhHHHhhhhccccccc-cccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCee
Q 038386 109 PKSTSIAD-DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFL-HSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGV 186 (523)
Q Consensus 109 ~~~~~~~~-~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v 186 (523)
+....+.. ....+ .+.++++. +|+.|+++|+.+. +.| +...++ .+.+.+.++++.+++.+.+.... +++++
T Consensus 97 ~~~~~~~~~~~~~~-~~~~l~~~-~g~~w~~~Rr~~~---~~f~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~-~g~~v 169 (482)
T 3k9v_A 97 LEIKPWKAYRDHRN-EAYGLMIL-EGQEWQRVRSAFQ---KKLMKPVEIM-KLDKKINEVLADFLERMDELCDE-RGRIP 169 (482)
T ss_dssp CCCHHHHHHHHHHT-CCCCTTTC-CHHHHHHHHHHHH---HHHTCHHHHG-GGHHHHHHHHHHHHHHHHHHCCT-TSCCT
T ss_pred CCchHHHHHHHhcC-CCCCceeC-CCchHHHHHHHhh---HHhcChHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence 66432110 01111 23355544 8999999999999 775 777888 99999999999999999876431 35689
Q ss_pred ehhHHHHHHHHHHhhhhhccCCcc---h---hHHHHHHHHHHHHHHHHhhhhHHhhcc-ccchhhhHHHHHHHHHhHHhH
Q 038386 187 YVCEHFRYAIFYLLVKMCFGNNVE---E---QEIRELGCAQKKLFMIINKLKVFAIMP-DLGKILFRKRWKKFLGIIRSR 259 (523)
Q Consensus 187 d~~~~~~~~~~~v~~~~~fG~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~ 259 (523)
|+.+++..+++++++.++||.+++ + +....+......+.... .....+| ++..++....+++..+..+.+
T Consensus 170 d~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~l~~~~~~~~~~~~~~~ 246 (482)
T 3k9v_A 170 DLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTF---GKMMVTPVELHKRLNTKVWQAHTLAWDTI 246 (482)
T ss_dssp THHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTG---GGGSSSCHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHH---HHHHhhhHHHHHhcCCHHHHHHHHHHHHH
Confidence 999999999999999999999882 1 22234444444433322 2222333 222223334456666777788
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcH
Q 038386 260 EDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPK 339 (523)
Q Consensus 260 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~ 339 (523)
.+++.++|+++++....+ ...|++..++.. +.++++++.+++.++++||+|||+++++|++++|++||+
T Consensus 247 ~~~~~~~i~~r~~~~~~~-----~~~d~l~~ll~~------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~ 315 (482)
T 3k9v_A 247 FKSVKPCIDNRLQRYSQQ-----PGADFLCDIYQQ------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQ 315 (482)
T ss_dssp HHHHHHHHHHHHHHTTTC-----TTSCHHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHhccC-----CchHHHHHHHhc------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHH
Confidence 888888998887654211 346788888753 348999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccC
Q 038386 340 IQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGR 419 (523)
Q Consensus 340 ~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~ 419 (523)
+|+++++||+++++.+ ..++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++||
T Consensus 316 ~q~kl~~Ei~~v~~~~-~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~ 392 (482)
T 3k9v_A 316 AQRRLLQEVQSVLPDN-QTPRAEDLRNMPYLKACLKESMRLTPSVPFT--TRTLDKPTVLGEYALPKGTVLTLNTQVLGS 392 (482)
T ss_dssp HHHHHHHHHHHHSCTT-CCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE--EEECSSCEEETTEEECTTCEEEEECSGGGG
T ss_pred HHHHHHHHHHHHhCCC-CCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc--ccccCCceeeCCEEECCCCEEEEccccccC
Confidence 9999999999999875 5789999999999999999999999999976 999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCC
Q 038386 420 DPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVD 499 (523)
Q Consensus 420 d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~ 499 (523)
||++|+||++|+||||++.+. ...+..|+|||.|+|.|+|++||++|+++++++|+++|++++.+. .+
T Consensus 393 d~~~~~~p~~F~PeRfl~~~~-----------~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-~~ 460 (482)
T 3k9v_A 393 SEDNFEDSHKFRPERWLQKEK-----------KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDN-EP 460 (482)
T ss_dssp CTTTCSSTTSCCGGGGTCTTS-----------CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCC-CC
T ss_pred CCccCCCcCccCccccCCCCC-----------CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCC-CC
Confidence 999999999999999997631 013478999999999999999999999999999999999998762 23
Q ss_pred cccccceEEeecCceeEEEeec
Q 038386 500 LSEKAEFTIEMKNPLHARISPR 521 (523)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~r 521 (523)
+.....+++.|+.+++|++++|
T Consensus 461 ~~~~~~~~~~p~~~~~~~~~~R 482 (482)
T 3k9v_A 461 VEMLHLGILVPSRELPIAFRPR 482 (482)
T ss_dssp CCEEESSSEEESSSCCEEEEEC
T ss_pred cccccceeecCCCCcceEEeeC
Confidence 3334466789999999999998
No 7
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=1.5e-76 Score=594.37 Aligned_cols=450 Identities=22% Similarity=0.346 Sum_probs=361.0
Q ss_pred cCcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCC
Q 038386 30 SSEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRP 109 (523)
Q Consensus 30 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~ 109 (523)
++..++.+.||||++ ++++ ..++++..+.+|+++||+||++++|+.++|+|+||+.+++|+.++...|++++
T Consensus 22 ~~~~~~~~lPPGP~~------l~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~ 93 (496)
T 3qz1_A 22 RWKLRNLHLPPLVPG------FLHL--LQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93 (496)
T ss_dssp -------CCCCBCSC------SCTT--SSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCC
T ss_pred hhhccCCCCCcCCcc------cccc--CCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence 344555789999987 3444 35688999999999999999999999999999999999999988888898888
Q ss_pred CCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehh
Q 038386 110 KSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVC 189 (523)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~ 189 (523)
...... ... .+..++++..+|+.|+++|++++ +.|+...++ .+.+.+.++++++++.+.+. .++++|+.
T Consensus 94 ~~~~~~--~~~-~~~~~l~~~~~g~~w~~~Rr~~~---~~f~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~vd~~ 162 (496)
T 3qz1_A 94 QIPSYK--LVS-QRCQDISLGDYSLLWKAHKKLTR---SALLLGTRS-SMEPWVDQLTQEFCERMRVQ----AGAPVTIQ 162 (496)
T ss_dssp CCTTTT--TSC-TTCCCSSSSCCSHHHHHHHHHHH---HHHHC--CC-CHHHHHHHHHHHHHHHHHTT----CSCCCHHH
T ss_pred CcchHH--Hhc-CCCCceEECCCCHHHHHHHHHHH---HHHhhccHh-hHHHHHHHHHHHHHHHHHhc----CCCccCHH
Confidence 765432 222 23236666644999999999999 999987777 89999999999999999762 46789999
Q ss_pred HHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHH
Q 038386 190 EHFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLV 267 (523)
Q Consensus 190 ~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 267 (523)
+++..+++++++.++||. .++.....+......+...... ..+...+|++..+. ....++..+..+.+.+++.+.+
T Consensus 163 ~~~~~~~~dvi~~~~fG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp-~~~~~~~~~~~~~~~~~~~~~i 240 (496)
T 3qz1_A 163 KEFSLLTCSIICYLTFGN-KEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFP-NPGLWRLKQAIENRDHMVEKQL 240 (496)
T ss_dssp HHHTHHHHHHTTTTSTTC-CCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 4444445555554443332222 34556778766543 2445677788888999999999
Q ss_pred HHHHHHHhhhhhccCCccchHHHHHHhhCCC---CC-CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHH
Q 038386 268 RDRKKIKQENEERDIDSESYVDTLIELRLPS---DR-KVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAK 343 (523)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~ 343 (523)
+++++.... ....|+++.|++...++ ++ +.++++++.+++.++++||+|||+++++|++++|++||++|++
T Consensus 241 ~~~~~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~k 315 (496)
T 3qz1_A 241 RRHKESMVA-----GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRR 315 (496)
T ss_dssp HHHHHSCCS-----SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHhhccC-----CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHH
Confidence 888765421 14578999999876432 11 2799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcC---CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCC
Q 038386 344 ILDEINGVVEQG---QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRD 420 (523)
Q Consensus 344 l~~Ei~~~~~~~---~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d 420 (523)
+++|++++++.+ +..+ .+++++||||+|||+|+||++|+++.. ++|.+++|++++||.|||||.|.++.+++|||
T Consensus 316 l~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 393 (496)
T 3qz1_A 316 LQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLA-LPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLD 393 (496)
T ss_dssp HHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSC-CCEECSSCEECSSSEECTTCEEEECHHHHTTC
T ss_pred HHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccc-cCccCCCCceECCEEeCCCCEEEechHHhhCC
Confidence 999999999763 3556 899999999999999999999999986 69999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCC--CC
Q 038386 421 PNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADE--DV 498 (523)
Q Consensus 421 ~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~--~~ 498 (523)
|++|+||++|+||||++.+ ....++|||.|+|.|+|++||++|+++++++|+++|+|++.++ .+
T Consensus 394 ~~~~~dp~~F~PeR~l~~~--------------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~ 459 (496)
T 3qz1_A 394 ETVWEQPHEFRPDRFLEPG--------------ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALP 459 (496)
T ss_dssp TTTSSSTTSCCCCCCC-----------------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCC
T ss_pred hhhcCCcccCCcccccCCC--------------CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCC
Confidence 9999999999999999763 1137999999999999999999999999999999999998852 23
Q ss_pred Ccccc--cceEEeecCceeEEEeecC
Q 038386 499 DLSEK--AEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 499 ~~~~~--~~~~~~~~~~~~~~~~~r~ 522 (523)
++... .+++..| .+++|++++|+
T Consensus 460 ~~~~~~~~~~~~~~-~~~~v~~~~R~ 484 (496)
T 3qz1_A 460 SLQPDPYCGVNLKV-QPFQVRLQPRG 484 (496)
T ss_dssp CSCCSCCCSSCCCC-CCCCCCCCCC-
T ss_pred CCCcccCcceEecC-CceEEEEEEec
Confidence 33332 3455554 59999999996
No 8
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=2.6e-76 Score=590.93 Aligned_cols=453 Identities=22% Similarity=0.343 Sum_probs=351.5
Q ss_pred CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhC-CcccccCCCCCccc
Q 038386 37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINN-GTVFADRPKSTSIA 115 (523)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~-~~~~~~~~~~~~~~ 115 (523)
+.||||+++|++||++.+ .++++.++.+|+++||+||++++|+.++|+|+||+.+++|+.++ ...|..++.....
T Consensus 14 ~~~PGP~~~PliGn~~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~- 89 (485)
T 3nxu_A 14 LGIPGPTPLPFLGNILSY---HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV- 89 (485)
T ss_dssp HTCCCCCCBTTTBTGGGG---GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC-
T ss_pred CCCCCCCCcCeecCcHHh---hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc-
Confidence 449999999999999988 34788999999999999999999999999999999999999776 5667766654322
Q ss_pred ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386 116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA 195 (523)
Q Consensus 116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~ 195 (523)
..++ .+++ ..+|+.|+++|++++ ++|+...++ .+.+.+.+.++.+++.+.+... +++++|+.+++..+
T Consensus 90 --~~~~---~~l~-~~~g~~w~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~~~--~g~~~d~~~~~~~~ 157 (485)
T 3nxu_A 90 --GFMK---SAIS-IAEDEEWKRLRSLLS---PTFTSGKLK-EMVPIIAQYGDVLVRNLRREAE--TGKPVTLKDVFGAY 157 (485)
T ss_dssp --GGGG---GSTT-TCCHHHHHHHHHHHG---GGGCHHHHH-HHHHHHHHHHHHHHHHHHHHHH--HTCCEEHHHHHHHH
T ss_pred --cccc---cCcc-ccCCcHHHHHHhhcC---hhcCHHHHH-HHHHHHHHHHHHHHHHHHHHhc--cCCcCcHHHHHHHH
Confidence 2222 2444 448999999999999 999999999 9999999999999999987654 47899999999999
Q ss_pred HHHHhhhhhccCCcchhH--HHHHHHHHHHHHHHH---hhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386 196 IFYLLVKMCFGNNVEEQE--IRELGCAQKKLFMII---NKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR 270 (523)
Q Consensus 196 ~~~v~~~~~fG~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 270 (523)
++++++.++||.+++... .+.+........... ........+|++..+.. +.......+...+++.+.+++.
T Consensus 158 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (485)
T 3nxu_A 158 SMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILE---VLNICVFPREVTNFLRKSVKRM 234 (485)
T ss_dssp HHHHHHHHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHH---HTTCCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHH---HhhhhhchHHHHHHHHHHHHHH
Confidence 999999999999885311 111222221111100 00122344555432210 0000011122333444444443
Q ss_pred HHHHhhhhhccCCccchHHHHHHhhCCC---CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386 271 KKIKQENEERDIDSESYVDTLIELRLPS---DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE 347 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 347 (523)
.+...... .....|+++.+++...++ .+..++++++++++..+++||+|||+++++|++++|++||++|++|++|
T Consensus 235 ~~~~~~~~--~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~E 312 (485)
T 3nxu_A 235 KESRLEDT--QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEE 312 (485)
T ss_dssp HHHHHHCC-----CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHhcc--CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 33321111 124579999999876532 2356999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCC
Q 038386 348 INGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDP 427 (523)
Q Consensus 348 i~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 427 (523)
++++++.+ ..++.+++.+||||+|||+|+||++|+++.. +|.+++|++++||.|||||.|.++.+++||||++|+||
T Consensus 313 i~~~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp 389 (485)
T 3nxu_A 313 IDAVLPNK-APPTYDTVLQMEYLDMVVNETLRLFPIAMRL--ERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 389 (485)
T ss_dssp HHHHSTTT-CCCCHHHHHHCHHHHHHHHHHHHHSCSCSCE--EEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSST
T ss_pred HHHHhccC-CCCCHHHHhcChHHHHHHHHHHhcCCCccCc--ceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCc
Confidence 99998865 6789999999999999999999999999865 99999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCCCcccccce
Q 038386 428 LEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDVDLSEKAEF 506 (523)
Q Consensus 428 ~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~~~~~~~~~ 506 (523)
++|+||||++.+.. ...+..|+|||.|+|.|+|++||++|+++++++|+++|+|++.+ ...++....+.
T Consensus 390 ~~F~PeR~l~~~~~----------~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~ 459 (485)
T 3nxu_A 390 EKFLPERFSKKNKD----------NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGG 459 (485)
T ss_dssp TSCCGGGGSHHHHT----------TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSS
T ss_pred cCcCccccCCCccc----------cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCe
Confidence 99999999976311 11346799999999999999999999999999999999999886 33344444456
Q ss_pred EEeecCceeEEEeecCC
Q 038386 507 TIEMKNPLHARISPRVN 523 (523)
Q Consensus 507 ~~~~~~~~~~~~~~r~~ 523 (523)
++.|+.+++|++++|++
T Consensus 460 ~~~p~~~~~~~~~~r~~ 476 (485)
T 3nxu_A 460 LLQPEKPVVLKVESRDG 476 (485)
T ss_dssp SCCBSSCCEEEEEEC--
T ss_pred eccCCCCeEEEEEEccC
Confidence 78888999999999963
No 9
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=5.6e-75 Score=578.87 Aligned_cols=452 Identities=20% Similarity=0.359 Sum_probs=363.0
Q ss_pred CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc
Q 038386 37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD 116 (523)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 116 (523)
+.||||+++|++||++.+ ..++++.++.+++++||+||++++|+.++++|+||+.+++|+.++...|++++......
T Consensus 10 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~- 86 (476)
T 2fdv_A 10 KLPPGPTPLPFIGNYLQL--NTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD- 86 (476)
T ss_dssp BCCCCCCCBTTTBTGGGC--CTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH-
T ss_pred CCCCCCCCCcccccHhhc--CCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh-
Confidence 569999999999999887 34678899999999999999999999999999999999999977667787766542221
Q ss_pred cceeeccccceeeCcCCchhHHHhhhhccccccccccch--hhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386 117 DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSI--KFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY 194 (523)
Q Consensus 117 ~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~ 194 (523)
.+.+ +.++++. +|+.|+++|+++. +.|+...+ + .+.+.+.++++.+++.+... .++++|+.+++..
T Consensus 87 -~~~~--~~~l~~~-~g~~~~~~Rr~~~---~~f~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~ 154 (476)
T 2fdv_A 87 -WVFK--GYGVVFS-NGERAKQLRRFSI---ATLRDFGVGKR-GIEERIQEEAGFLIDALRGT----GGANIDPTFFLSR 154 (476)
T ss_dssp -HHHT--TCSSSSC-CHHHHHHHHHHHH---HHHHHTTTTSH-HHHHHHHHHHHHHHHHHHHT----TTCCBCCHHHHHH
T ss_pred -hhcC--CCCeEec-CchHHHHHHHHHH---HHHHHhCCChh-hHHHHHHHHHHHHHHHHHhc----CCCccChHHHHHH
Confidence 1111 2355555 8999999999999 99988766 6 78999999999999999763 2568999999999
Q ss_pred HHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386 195 AIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR 270 (523)
Q Consensus 195 ~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 270 (523)
+++++++.++||.+++ ++....+......+...... ..+...+|++.++++ ...++..+..+.+.+++.++|+++
T Consensus 155 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~-~~~~~~~~~~~~~~~~~~~~i~~r 233 (476)
T 2fdv_A 155 TVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN 233 (476)
T ss_dssp HHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999874 33334444444444332211 113345565222222 233556677788888999999887
Q ss_pred HHHHhhhhhccCCccchHHHHHHhhCC---CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386 271 KKIKQENEERDIDSESYVDTLIELRLP---SDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE 347 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 347 (523)
++... . ....|+++.+++...+ +.+..++++++++++.++++||+|||+++++|++++|++||++|++||+|
T Consensus 234 ~~~~~---~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E 308 (476)
T 2fdv_A 234 QRTLD---P--NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308 (476)
T ss_dssp HTTCC---T--TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHhcC---C--CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 65421 1 1346999999986522 12356999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCC
Q 038386 348 INGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDP 427 (523)
Q Consensus 348 i~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 427 (523)
|+++++.+ ..++.+++.+||||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+||
T Consensus 309 i~~~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp 386 (476)
T 2fdv_A 309 IDRVIGKN-RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS-LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386 (476)
T ss_dssp HHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTC-SCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSST
T ss_pred HHHhhcCC-CCCChhhhhcChHHHHHHHHHHHhcCCcccC-cceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCc
Confidence 99998764 6689999999999999999999999999965 699999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCC--CCccc-cc
Q 038386 428 LEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADED--VDLSE-KA 504 (523)
Q Consensus 428 ~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~--~~~~~-~~ 504 (523)
++|+||||++.+.. ...+..|+|||.|+|.|+|++||++|+++++++|+++|++++.++. ++... ..
T Consensus 387 ~~F~PeR~l~~~~~----------~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~ 456 (476)
T 2fdv_A 387 QDFNPQHFLNEKGQ----------FKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHV 456 (476)
T ss_dssp TSCCGGGGBCTTSC----------BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEE
T ss_pred cccCchhhCCCCCC----------CCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCcccccc
Confidence 99999999975310 0124689999999999999999999999999999999999988632 22333 34
Q ss_pred ceEEeecCceeEEEeecC
Q 038386 505 EFTIEMKNPLHARISPRV 522 (523)
Q Consensus 505 ~~~~~~~~~~~~~~~~r~ 522 (523)
+++..| .+++|++++|+
T Consensus 457 ~~~~~p-~~~~v~~~~R~ 473 (476)
T 2fdv_A 457 GFATIP-RNYTMSFLPRH 473 (476)
T ss_dssp SSSEEC-CCCCEEEEEC-
T ss_pred ceeecC-CceEEEEEecc
Confidence 556666 78999999996
No 10
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=8e-77 Score=589.72 Aligned_cols=444 Identities=17% Similarity=0.238 Sum_probs=362.7
Q ss_pred CCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 038386 37 NLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA 115 (523)
Q Consensus 37 ~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 115 (523)
+.||||++ +|++||++++ .++++.++.++++|||+||++++++.++|+|+||+.+++++.++...|..++......
T Consensus 11 ~~PP~~~~~lP~iG~~~~~---~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~ 87 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAF---GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT 87 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHH---HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHh---hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence 46788775 8999999988 4578999999999999999999999999999999999999988887787766543222
Q ss_pred ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386 116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA 195 (523)
Q Consensus 116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~ 195 (523)
..++| .++++..+|+.|+++|+++. ++|+...++ .+.+.+.+.+.++++.+.+ ++.+|+.+.+..+
T Consensus 88 -~~~~g---~~~~~~~~~~~~~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~ 153 (461)
T 3ld6_A 88 -TPVFG---KGVAYDVPNPVFLEQKKMLK---SGLNIAHFK-QHVSIIEKETKEYFESWGE------SGEKNVFEALSEL 153 (461)
T ss_dssp -HHHHC---TTSGGGSCHHHHHHHHHHHH---HHSSHHHHH-HHHHHHHHHHHHHGGGGCS------EEEEEHHHHHHHH
T ss_pred -hccCC---CccccCCCcHHHHHHHHhcc---ccccHHHHh-hhhHHHHHHHHHHHHHHhh------cCCccHHHHHHHH
Confidence 02233 35556668999999999999 999999999 9999999999988887643 5678999999999
Q ss_pred HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Q 038386 196 IFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQ 275 (523)
Q Consensus 196 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 275 (523)
++++++.++||.+++....+.+......+..... .....+|.+.. ...+++..++.+.+.+++.+.|+++++..
T Consensus 154 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~i~~r~~~~- 227 (461)
T 3ld6_A 154 IILTASHCLHGKEIRSQLNEKVAQLYADLDGGFS--HAAWLLPGWLP---LPSFRRRDRAHREIKDIFYKAIQKRRQSQ- 227 (461)
T ss_dssp HHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSS--HHHHHSCTTSC---CHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHcCcchhhhhhhhhhhhhhhhhhhhh--hHHHhhhhhcc---CcHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 9999999999988754333333333333322221 22233454432 23345666777888888888887765431
Q ss_pred hhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcC
Q 038386 276 ENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQG 355 (523)
Q Consensus 276 ~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~ 355 (523)
+...|+++.|+++..+ ++..+++++++.++.++++||+|||+++++|++++|+.||++|++||+|+++++++.
T Consensus 228 ------~~~~d~l~~ll~~~~~-~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~ 300 (461)
T 3ld6_A 228 ------EKIDDILQTLLDATYK-DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN 300 (461)
T ss_dssp ------CCCCSHHHHHHTCBCT-TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT
T ss_pred ------CCCcchhhhhHHhhhc-ccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhccc
Confidence 1557899999987754 456799999999999999999999999999999999999999999999999999887
Q ss_pred CcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcc
Q 038386 356 QQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERF 435 (523)
Q Consensus 356 ~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rf 435 (523)
...++.+++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||
T Consensus 301 ~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRf 378 (461)
T 3ld6_A 301 LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM--MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRY 378 (461)
T ss_dssp CCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGG
T ss_pred ccchhHHHHHHHhhhhheeeeccccCCchhcc--ccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCcccc
Confidence 67789999999999999999999999999877 8999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCcee
Q 038386 436 LYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLH 515 (523)
Q Consensus 436 l~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (523)
++.+. ...++..|+|||+|+|.|+|++||++|++++++.||++|+|++.++..+.... ..++.+++++.
T Consensus 379 l~~~~----------~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~-~~~~~~p~~~~ 447 (461)
T 3ld6_A 379 LQDNP----------ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNY-TTMIHTPENPV 447 (461)
T ss_dssp GSCCH----------HHHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCC-SSSSCCBSSCE
T ss_pred CCCCc----------ccCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccc-cceEEcCCceE
Confidence 98641 11134679999999999999999999999999999999999998733222222 33345567888
Q ss_pred EEEeecCC
Q 038386 516 ARISPRVN 523 (523)
Q Consensus 516 ~~~~~r~~ 523 (523)
|++++|++
T Consensus 448 v~~~~Rss 455 (461)
T 3ld6_A 448 IRYKRRST 455 (461)
T ss_dssp EEEEECC-
T ss_pred EEEEECCC
Confidence 99999974
No 11
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-75 Score=585.55 Aligned_cols=460 Identities=24% Similarity=0.371 Sum_probs=363.6
Q ss_pred CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
++++.+|||+++|++||++.+ .++++..+.+|+++||+||++++|+.++++++||+.+++|+.++...|++++....
T Consensus 13 ~~lp~~PgP~~~p~~G~~~~~---~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~ 89 (495)
T 2hi4_A 13 KGLKSPPEPWGWPLLGHVLTL---GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYT 89 (495)
T ss_dssp TTCBCCCCCCCBTTTBTHHHH---TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHH
T ss_pred CCCCCCCCCCCCcceeeHHhc---CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHH
Confidence 345556999999999999887 34688999999999999999999999999999999999999777677887775532
Q ss_pred ccccceeeccccceeeC-cCCchhHHHhhhhccccccccc---cch--hh---hcchhhHHHHHHHHHHHHHHhhhcCCC
Q 038386 114 IADDLIFANKRRGISTY-PYGTTWRVLRHNFTRSSGFLHS---SSI--KF---NHSHLRGRVLEKLICELKREYCECRGD 184 (523)
Q Consensus 114 ~~~~~~~~~~~~~i~~~-~~g~~w~~~R~~l~~~~~~f~~---~~l--~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~ 184 (523)
+ ..+. ++.+++++ .+|+.|+++|++++ +.|+. ... .. .+.+.+.++++++++.+.+... +++
T Consensus 90 ~---~~~~-~~~~l~~~~~~g~~w~~~Rr~~~---~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~--~~~ 160 (495)
T 2hi4_A 90 S---TLIT-DGQSLTFSTDSGPVWAARRRLAQ---NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMA--GPG 160 (495)
T ss_dssp H---HTST-TSCCTTTSSCCSHHHHHHHHHHH---HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHH--TTS
T ss_pred H---HHhc-CCCCEEEcCCCChHHHHHHHHHH---HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhcc--CCC
Confidence 2 1122 22455555 47999999999998 87653 222 10 4778999999999999987544 467
Q ss_pred eeehhHHHHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHH
Q 038386 185 GVYVCEHFRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDV 262 (523)
Q Consensus 185 ~vd~~~~~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~ 262 (523)
++|+.+++..+++++++.++||.+++ ++....+......+...........++|++..+ +...+++..+..+.+.++
T Consensus 161 ~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l-p~~~~~~~~~~~~~~~~~ 239 (495)
T 2hi4_A 161 HFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYL-PNPALQRFKAFNQRFLWF 239 (495)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGS-CCHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhc-CchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999874 333333333333333322222244567876543 323456677788888999
Q ss_pred HHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCC---CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcH
Q 038386 263 FVGLVRDRKKIKQENEERDIDSESYVDTLIELRLP---SDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPK 339 (523)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~ 339 (523)
+.++|+++++.... ....|+++.|++...+ +.+..++++++++++.++++||+|||+++++|++++|++||+
T Consensus 240 ~~~~i~~r~~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~ 314 (495)
T 2hi4_A 240 LQKTVQEHYQDFDK-----NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPE 314 (495)
T ss_dssp HHHHHHHHHHTCCT-----TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhhcc-----cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHH
Confidence 99999988764311 1346899999965321 123469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccC
Q 038386 340 IQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGR 419 (523)
Q Consensus 340 ~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~ 419 (523)
+|++|++||+++++.+ ..++.+++.+||||+|||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||
T Consensus 315 ~~~kl~~Ei~~v~~~~-~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r 392 (495)
T 2hi4_A 315 IQRKIQKELDTVIGRE-RRPRLSDRPQLPYLEAFILETFRHSSFLPFT-IPHSTTRDTTLNGFYIPKKCCVFVNQWQVNH 392 (495)
T ss_dssp HHHHHHHHHHHHTTTS-SCCCGGGSTTCHHHHHHHHHHHHHHCSSCBC-SCEECSSCEEETTEEECTTCEEEEBHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-CCCChHHhccCHHHHHHHHHHHHccCCccCC-CccccCCCeeEeCeEECCCCEEEeChHHhhC
Confidence 9999999999998864 6789999999999999999999999999975 6999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCC
Q 038386 420 DPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDV 498 (523)
Q Consensus 420 d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~ 498 (523)
||++|+||++|+||||++.+. .. .....+..|+|||.|+|.|+|++||++|+++++++|+++|++++.+ ..+
T Consensus 393 dp~~~~dP~~F~PeRfl~~~~-----~~--~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~ 465 (495)
T 2hi4_A 393 DPELWEDPSEFRPERFLTADG-----TA--INKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKV 465 (495)
T ss_dssp CTTTCSSTTSCCGGGGBCTTS-----SS--BCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCC
T ss_pred CcccCCCcCccCcccccCCCC-----cc--cccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCC
Confidence 999999999999999997531 00 0011246799999999999999999999999999999999999876 333
Q ss_pred CcccccceEEeecCce-eEEEeecC
Q 038386 499 DLSEKAEFTIEMKNPL-HARISPRV 522 (523)
Q Consensus 499 ~~~~~~~~~~~~~~~~-~~~~~~r~ 522 (523)
++....+++..|. ++ +|+++ |.
T Consensus 466 ~~~~~~~~~~~p~-~~~~v~~~-R~ 488 (495)
T 2hi4_A 466 DLTPIYGLTMKHA-RCEHVQAR-RF 488 (495)
T ss_dssp CCCCBCSSSCBCC-CCCCBEEE-CC
T ss_pred CccccCCceecCC-CcceEEEE-Ec
Confidence 3444445555554 56 88888 74
No 12
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=4.8e-75 Score=582.13 Aligned_cols=462 Identities=19% Similarity=0.238 Sum_probs=365.8
Q ss_pred CcCCCCCCCCCCCccceeeecccccC--CCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccC
Q 038386 31 SEISTQNLPPGPPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADR 108 (523)
Q Consensus 31 ~~~~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~ 108 (523)
++.++++.+|||++.|+. +++.+.. ..++++.++.+|++|||+||++++|+.+.|+|+||+.+++|+.++ ..|+++
T Consensus 3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r 80 (487)
T 3n9y_A 3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPER 80 (487)
T ss_dssp -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCC
T ss_pred CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCC
Confidence 345667789999988875 6666543 234688899999999999999999999999999999999999665 467777
Q ss_pred CCCCcccccceeeccccceeeCcCCchhHHHhhhhccccc-cccccchhhhcchhhHHHHHHHHHHHHHHhhh--cCCCe
Q 038386 109 PKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSG-FLHSSSIKFNHSHLRGRVLEKLICELKREYCE--CRGDG 185 (523)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~ 185 (523)
+....+.........+.+++ ..+|+.|+++|++++ + +|+...++ .+.+.+++.++++++.+.+.... .++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~-~~~g~~w~~~Rr~l~---~~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~ 155 (487)
T 3n9y_A 81 FLIPPWVAYHQYYQRPIGVL-LKKSAAWKKDRVALN---QEVMAPEATK-NFLPLLDAVSRDFVSVLHRRIKKAGSGNYS 155 (487)
T ss_dssp CCCHHHHHHHHHTTCCCCGG-GCCHHHHHHHHHHHH---HHHTSHHHHT-THHHHHHHHHHHHHHHHHHHHHHHTSSSEE
T ss_pred CCCcHHHHHHHHccccCCCc-cCCcHHHHHHHHhcC---cccCCchHHH-HhhhHHHHHHHHHHHHHHHHhcccccCCCC
Confidence 76532210011111223444 458999999999999 7 59999999 99999999999999999875421 12457
Q ss_pred eehhHHHHHHHHHHhhhhhccCCcc------hhHHHHHHHHHHHHHHHHhhhhHHhhccc-cchhhhHHHHHHHHHhHHh
Q 038386 186 VYVCEHFRYAIFYLLVKMCFGNNVE------EQEIRELGCAQKKLFMIINKLKVFAIMPD-LGKILFRKRWKKFLGIIRS 258 (523)
Q Consensus 186 vd~~~~~~~~~~~v~~~~~fG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~~~~~~~~~~~~~~~~~ 258 (523)
+|+.+++..+++++++.++||.+++ +.....+......+.... .....+|. +.+++....+++..+..+.
T Consensus 156 vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~l~~~~~~~~~~~~~~~~~~ 232 (487)
T 3n9y_A 156 GDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTS---VPMLNLPPDLFRLFRTKTWKDHVAAWDV 232 (487)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHH---GGGTTSCHHHHHHHCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHH---HHHHhcCHHHHhhcccHHHHHHHHHHHH
Confidence 9999999999999999999999883 223334444444433322 22233443 3333334445566666677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCc
Q 038386 259 REDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYP 338 (523)
Q Consensus 259 ~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p 338 (523)
+.++..+.++++++.............|+++.+++. +.++++++++++.++++||+|||+++++|++++|++||
T Consensus 233 ~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P 306 (487)
T 3n9y_A 233 IFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNL 306 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhc------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCh
Confidence 777888888877666543322222457899999863 34899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeecccccc
Q 038386 339 KIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMG 418 (523)
Q Consensus 339 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~ 418 (523)
++|++|++||+++++.+ ..++.+++++||||+|||+|+||++|+++.+ +|.+++|++++||.|||||.|.++.+++|
T Consensus 307 ~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~ 383 (487)
T 3n9y_A 307 KVQDMLRAEVLAARHQA-QGDMATMLQLVPLLKASIKETLRLHPISVTL--QRYLVNDLVLRDYMIPAKTLVQVAIYALG 383 (487)
T ss_dssp HHHHHHHHHHHHHHHHT-TTCHHHHTTSCHHHHHHHHHHHHHSCSSSEE--EEECSSCEEETTEEECTTCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHhhccc-ccchhhhhhhCHHHHHHHHHHhhhCCccccc--ceeecCceeeCCEEECCCCEEEeCcHHhc
Confidence 99999999999999875 4456899999999999999999999999855 99999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCC
Q 038386 419 RDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDV 498 (523)
Q Consensus 419 ~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~ 498 (523)
|||++|+||++|+||||++.+. ...+..|+|||.|+|.|+|++||++|+++++++|+++|+|++.++ .
T Consensus 384 ~d~~~~~dp~~F~PeR~l~~~~-----------~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~ 451 (487)
T 3n9y_A 384 REPTFFFDPENFDPTRWLSKDK-----------NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHL-S 451 (487)
T ss_dssp TCTTTSSSTTSCCGGGGTCSCT-----------TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTC-C
T ss_pred CCcccCCCcccCChhhcCCCCC-----------CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCC-c
Confidence 9999999999999999997531 012467999999999999999999999999999999999998863 3
Q ss_pred CcccccceEEeecCceeEEEeecCC
Q 038386 499 DLSEKAEFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~r~~ 523 (523)
++....++++.|+.+++|++++|++
T Consensus 452 ~~~~~~~~~~~p~~~~~~~~~~r~~ 476 (487)
T 3n9y_A 452 DVGTTFNLILMPEKPISFTFWPFNQ 476 (487)
T ss_dssp CCCEEESSSEEESSCCCEEEEEC--
T ss_pred ccccceeeeecCCCCceeEEEECCc
Confidence 4444456788999999999999963
No 13
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=7.3e-75 Score=578.18 Aligned_cols=458 Identities=20% Similarity=0.306 Sum_probs=365.0
Q ss_pred CCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 34 STQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
++.+.||||+++|++||++.+......++..+.+++++||+||++++|+.++++|+||+.+++|+.+++..|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 34567999999999999988743211278899999999999999999999999999999999999877777888765432
Q ss_pred ccccceeeccccceeeCcCCchhHHHhhhhccccccccccch--hhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH
Q 038386 114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSI--KFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH 191 (523)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~ 191 (523)
. ..+.. +.++++..+|+.|+++|+++. +.|+...+ . .+.+.+.++++.+++.+.+. .++++|+.++
T Consensus 89 ~---~~~~~-~~~~~~~~~g~~w~~~R~~~~---~~f~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~~d~~~~ 156 (481)
T 3czh_A 89 F---MKMTK-MGGLLNSRYGRGWVDHRRLAV---NSFRYFGYGQK-SFESKILEETKFFNDAIETY----KGRPFDFKQL 156 (481)
T ss_dssp H---HHHHT-TCSSTTCCSSHHHHHHHHHHH---HHHHHTTTTST-THHHHHHHHHHHHHHHHHTT----TTCCBCCHHH
T ss_pred H---HhhcC-CCCeEeCCCChHHHHHHHHHH---HHHHHhcCChH-HHHHHHHHHHHHHHHHHHHc----CCCCcCHHHH
Confidence 2 11221 225555568999999999999 99986544 5 78899999999999998753 2568999999
Q ss_pred HHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhhh--hHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHH
Q 038386 192 FRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINKL--KVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLV 267 (523)
Q Consensus 192 ~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 267 (523)
+..+++++++.++||.+++ ++....+......+....... .+...+|++.. ++...+++..+..+.+.+++.++|
T Consensus 157 ~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-lp~~~~~~~~~~~~~~~~~~~~~i 235 (481)
T 3czh_A 157 ITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGI-LPFGKHQQLFRNAAVVYDFLSRLI 235 (481)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGG-CSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHh-CCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 333444444444444432221 14566787743 222234566777888889999999
Q ss_pred HHHHHHHhhhhhccCCccchHHHHHHhhCCC---CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHH
Q 038386 268 RDRKKIKQENEERDIDSESYVDTLIELRLPS---DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKI 344 (523)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 344 (523)
+++++.... ....|+++.|++...++ .+..+++++++.++.++++||+|||+++++|++++|++||++|++|
T Consensus 236 ~~r~~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl 310 (481)
T 3czh_A 236 EKASVNRKP-----QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV 310 (481)
T ss_dssp HHHHTTCCT-----TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHhcCC-----CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHH
Confidence 888754211 13468999999765321 2346999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC
Q 038386 345 LDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW 424 (523)
Q Consensus 345 ~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 424 (523)
++|++++++.+ ..++.+++.+||||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|
T Consensus 311 ~~Ei~~~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~ 388 (481)
T 3czh_A 311 QKEIDLIMGPN-GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG-IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388 (481)
T ss_dssp HHHHHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTC-SCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC
T ss_pred HHHHHHhcCCC-CCCChhhhhhChHHHHHHHHHHhhccccccC-cceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC
Confidence 99999998764 6789999999999999999999999999965 699999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC-CCCCcccc
Q 038386 425 EDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD-EDVDLSEK 503 (523)
Q Consensus 425 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~~~~~~ 503 (523)
+||++|+||||++.+. . ...+..|+|||.|+|.|+|++||++|+++++++|+++|++++.+ ...+....
T Consensus 389 ~dP~~F~PeR~l~~~~-----~-----~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~ 458 (481)
T 3czh_A 389 RDPEVFHPERFLDSSG-----Y-----FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPR 458 (481)
T ss_dssp SSTTSCCGGGGBCTTS-----C-----BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCC
T ss_pred CCccccCCCceeCCCC-----C-----CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccC
Confidence 9999999999996531 0 01347899999999999999999999999999999999999875 22223323
Q ss_pred cceEEeecCceeEEEeecC
Q 038386 504 AEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 504 ~~~~~~~~~~~~~~~~~r~ 522 (523)
.+++.. +.++.+++++|.
T Consensus 459 ~~~~~~-p~~~~~~~~~~~ 476 (481)
T 3czh_A 459 LGMTLQ-PQPYLICAERRH 476 (481)
T ss_dssp SSSSCC-CCCCCBEEEECC
T ss_pred CCceec-CCceEEEEEecc
Confidence 344444 568889999985
No 14
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=8e-75 Score=577.78 Aligned_cols=453 Identities=23% Similarity=0.355 Sum_probs=359.5
Q ss_pred CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc
Q 038386 37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD 116 (523)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 116 (523)
+.||||+++|++||++.+ ..++++..+.+++++||+||++++|+.++|+|+||+.+++|+.++...|.+++....+.
T Consensus 10 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~- 86 (476)
T 1po5_A 10 KLPPGPSPLPVLGNLLQM--DRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD- 86 (476)
T ss_dssp CCCCCSCCBTTTBTGGGC--CTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC-
T ss_pred CCCcCCCCCCccccHHhc--cCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH-
Confidence 569999999999999887 35678899999999999999999999999999999999999977777788766543222
Q ss_pred cceeeccccceeeCcCCchhHHHhhhhcccccccccc--chhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386 117 DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSS--SIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY 194 (523)
Q Consensus 117 ~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~--~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~ 194 (523)
.+. .+.+++++ +|+.|+++|+++. +.|+.. ..+ .+.+.+.++++.+++.+.+. .++++|+.+++..
T Consensus 87 -~~~--~~~~l~~~-~g~~w~~~Rr~~~---~~f~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~~d~~~~~~~ 154 (476)
T 1po5_A 87 -PIF--QGYGVIFA-NGERWRALRRFSL---ATMRDFGMGKR-SVEERIQEEARCLVEELRKS----KGALLDNTLLFHS 154 (476)
T ss_dssp -SCC--SSCCCCCS-SHHHHHHHHHHHH---HHHHHSCCCHH-HHHHHHHHHHHHHHHHHHHT----TTCCBCCHHHHHH
T ss_pred -hhc--CCCceEec-CCcHHHHHHHHHH---HHHHHhCCChh-HHHHHHHHHHHHHHHHHHhc----CCCccCHHHHHHH
Confidence 222 12356555 8999999999998 889877 456 78999999999999999763 2578999999999
Q ss_pred HHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHh-h-hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386 195 AIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIIN-K-LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR 270 (523)
Q Consensus 195 ~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~-~-~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 270 (523)
+++++++.++||.+++ +.....+............ . ..+...+|++.++++ ...++..+..+.+.+++.++|+++
T Consensus 155 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp-~~~~~~~~~~~~~~~~~~~~i~~r 233 (476)
T 1po5_A 155 ITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP-GTHRQIYRNLQEINTFIGQSVEKH 233 (476)
T ss_dssp HHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999874 2222333332222221111 0 122335564222221 123456667778888999999888
Q ss_pred HHHHhhhhhccCCccchHHHHHHhhCC---CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386 271 KKIKQENEERDIDSESYVDTLIELRLP---SDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE 347 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 347 (523)
++.... ....|+++.|+....+ +.+..++++++++++.++++||+|||+++++|++++|++||++|++|++|
T Consensus 234 ~~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E 308 (476)
T 1po5_A 234 RATLDP-----SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKE 308 (476)
T ss_dssp HTTCCT-----TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHhcCC-----CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 754211 1346899998865321 12345899999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCC
Q 038386 348 INGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDP 427 (523)
Q Consensus 348 i~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 427 (523)
|+++++.+ ..++.+++++||||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+||
T Consensus 309 i~~~~~~~-~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp 386 (476)
T 1po5_A 309 IEQVIGSH-RPPALDDRAKMPYTDAVIHEIQRLGDLIPFG-VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386 (476)
T ss_dssp HHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTC-CCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSST
T ss_pred HHHHhCCC-CCCChHHHhcCcHHHHHHHHHHHhccCCCCC-CccccCCCceecCEecCCCCEEEeehHhHhcCccccCCc
Confidence 99998764 6789999999999999999999999999965 699999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCC--CCccc-cc
Q 038386 428 LEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADED--VDLSE-KA 504 (523)
Q Consensus 428 ~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~--~~~~~-~~ 504 (523)
++|+||||++.+.. ...+..|+|||.|+|.|+|++||++|+++++++|+++|++++.++. ++... ..
T Consensus 387 ~~F~PeR~l~~~~~----------~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~ 456 (476)
T 1po5_A 387 NTFNPGHFLDANGA----------LKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRES 456 (476)
T ss_dssp TSCCGGGGBCTTSC----------BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCST
T ss_pred cccCchhhCCCCCC----------ccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcC
Confidence 99999999975310 0123689999999999999999999999999999999999988632 12223 34
Q ss_pred ceEEeecCceeEEEeecCC
Q 038386 505 EFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 505 ~~~~~~~~~~~~~~~~r~~ 523 (523)
+++..| .+++|++++|+.
T Consensus 457 ~~~~~p-~~~~v~~~~R~~ 474 (476)
T 1po5_A 457 GVGNVP-PSYQIRFLARHH 474 (476)
T ss_dssp TSSCCC-CCCCBEEEECC-
T ss_pred ceeecC-cceEEEEEecCC
Confidence 556666 799999999963
No 15
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1.2e-74 Score=576.92 Aligned_cols=452 Identities=19% Similarity=0.302 Sum_probs=352.7
Q ss_pred CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc
Q 038386 37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD 116 (523)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 116 (523)
+.||||+++|++||++.+ ..++++..+.+++++||+||++++|+.+.|+|+||+.+++|+.++...|.+++....+.
T Consensus 11 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~- 87 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQI--GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE- 87 (477)
T ss_dssp BCCCCSSSCC-----CCB--CHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC-
T ss_pred CCCCCCCCCceeccHhhc--CCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh-
Confidence 579999999999999887 24568899999999999999999999899999999999999977777788766543222
Q ss_pred cceeeccccceeeCcCCchhHHHhhhhcccccccccc--chhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386 117 DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSS--SIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY 194 (523)
Q Consensus 117 ~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~--~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~ 194 (523)
...+ +.++++. +|+.|+++|+++. +.|+.. .++ .+.+.+.++++.+++.+.+. .++++|+.+++..
T Consensus 88 -~~~~--~~~l~~~-~g~~w~~~Rr~~~---~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~ 155 (477)
T 1r9o_A 88 -RANR--GFGIVFS-NGKKWKEIRRFSL---MTLRNFGMGKR-SIEDRVQEEARCLVEELRKT----KASPCDPTFILGC 155 (477)
T ss_dssp -TTTC--TTSSTTC-CHHHHHHHHHHHH---HHHTTSSSCSS-CHHHHHHHHHHHHHHHHHTT----TTSCBCTHHHHHH
T ss_pred -hccC--CCceEec-CChHHHHHHHHHH---HHHHHhCCChH-HHHHHHHHHHHHHHHHHHhc----CCCccChHHHHHH
Confidence 2211 2355555 8999999999998 889877 456 78899999999999998753 2568999999999
Q ss_pred HHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHh-h-hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386 195 AIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIIN-K-LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR 270 (523)
Q Consensus 195 ~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~-~-~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 270 (523)
+++++++.++||.+++ ++....+............ . ..+...+|++.++++ ...++..+..+.+.+++.++|+++
T Consensus 156 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~~~~i~~r 234 (477)
T 1r9o_A 156 APCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAFMKSYILEKVKEH 234 (477)
T ss_dssp HHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT-TCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998874 2233333333333332211 1 123345676433322 223556667778889999999888
Q ss_pred HHHHhhhhhccCCccchHHHHHHhhCC---CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386 271 KKIKQENEERDIDSESYVDTLIELRLP---SDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE 347 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 347 (523)
++.... ....|+++.|+....+ +.+..++++++++++.++++||+|||+++++|++++|++||++|++|++|
T Consensus 235 ~~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E 309 (477)
T 1r9o_A 235 QESMDM-----NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEE 309 (477)
T ss_dssp HHTCCT-----TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HhccCC-----CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 764211 1346899998864321 12356999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCC
Q 038386 348 INGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDP 427 (523)
Q Consensus 348 i~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 427 (523)
|+++++.+ ..++.+++++||||+|||+|+||++|+++.. ++|.+++|++++||.|||||.|.++.+++||||++|+||
T Consensus 310 i~~~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP 387 (477)
T 1r9o_A 310 IERVIGRN-RSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS-LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNP 387 (477)
T ss_dssp HHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHTSSTTC-SCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSST
T ss_pred HHHhcCCC-CCCChHhhccCcHHHHHHHHHHHhcCCCCCC-CceeccCCccccceecCCCCEEEEecHHhhCCcccCCCc
Confidence 99998764 6789999999999999999999999999965 699999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCC--CCccc-cc
Q 038386 428 LEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADED--VDLSE-KA 504 (523)
Q Consensus 428 ~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~--~~~~~-~~ 504 (523)
++|+||||++.+.. ...+..|+|||.|+|.|+|++||++|+++++++||++|++++.++. ++... ..
T Consensus 388 ~~F~PeR~l~~~~~----------~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~ 457 (477)
T 1r9o_A 388 EMFDPHHFLDEGGN----------FKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVN 457 (477)
T ss_dssp TSCCGGGGBCTTSC----------BCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCC
T ss_pred cccCccceECCCCC----------cCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcC
Confidence 99999999975310 0123689999999999999999999999999999999999987632 12222 34
Q ss_pred ceEEeecCceeEEEeecC
Q 038386 505 EFTIEMKNPLHARISPRV 522 (523)
Q Consensus 505 ~~~~~~~~~~~~~~~~r~ 522 (523)
+++..| .++++++++|+
T Consensus 458 ~~~~~p-~~~~~~~~~R~ 474 (477)
T 1r9o_A 458 GFASVP-PFYQLCFIPIH 474 (477)
T ss_dssp SSSCBC-CCCCEEEEECC
T ss_pred ceeecC-CCeEEEEEEec
Confidence 555565 78999999996
No 16
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1.6e-73 Score=565.55 Aligned_cols=440 Identities=16% Similarity=0.246 Sum_probs=362.6
Q ss_pred CCCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 36 QNLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 36 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
.++||||++ +|++||++++. .+++.++.+|+++|| +||++++++.++|+|+||+.+++++.++...|+.++....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 78 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFG---KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSF 78 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHH---HCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGG
T ss_pred CCCCCCCCCCcchhccHHHHc---cCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHH
Confidence 467999665 99999999883 478899999999999 9999999999999999999999999887778887765543
Q ss_pred ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHH-HHHHHhhhcCCCeeehhHHH
Q 038386 114 IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLIC-ELKREYCECRGDGVYVCEHF 192 (523)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~-~l~~~~~~~~~~~vd~~~~~ 192 (523)
.. .++|. ++++..+|+.|+++|+++. +.|+...++ .+.+.+.+++.++++ .+.+ .++.+|+.+++
T Consensus 79 ~~--~~~g~---~~~~~~~~~~~~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~ll~~~~~~-----~~~~vd~~~~~ 144 (450)
T 3gw9_A 79 MV--PVFGE---GVAYAAPYPRMREQLNFLA---EELTIAKFQ-NFVPAIQHEVRKFMAANWDK-----DEGEINLLEDC 144 (450)
T ss_dssp GH--HHHCT---TSGGGSCHHHHHHHHHHHH---HTTSGGGCT-THHHHHHHHHHHHHHHHSCS-----SEEEEEHHHHH
T ss_pred HH--HHhcC---CcccCCCcHHHHHHHHHHH---HHHhHHHHH-HHHHHHHHHHHHHHHHHhcc-----CCCcccHHHHH
Confidence 32 33432 4555558999999999999 999999999 999999999999988 5532 25689999999
Q ss_pred HHHHHHHhhhhhccCCcchh-HHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHH
Q 038386 193 RYAIFYLLVKMCFGNNVEEQ-EIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRK 271 (523)
Q Consensus 193 ~~~~~~v~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 271 (523)
..+++++++.++||.+++.. ....+......+.... .....++|++..+ +....++..++.+.+.+++.+++++++
T Consensus 145 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~ 221 (450)
T 3gw9_A 145 STMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL--IPAAVFLPILLKL-PLPQSARCHEARTELQKILSEIIIARK 221 (450)
T ss_dssp HHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHTC--CGGGGTCGGGGGS-CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcchhhhhhhHHHHHHHHHHHhcc--ccchhcccchhcc-CCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887432 1344444444332221 2334567776543 334456677788889999999999887
Q ss_pred HHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHH--hCcHHHHHHHHHHH
Q 038386 272 KIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVV--KYPKIQAKILDEIN 349 (523)
Q Consensus 272 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~l~~Ei~ 349 (523)
+..... +....|+++.+++...+ ++..+++++++.+++.+++||+|||+++++|++++|+ .||++|+++++|++
T Consensus 222 ~~~~~~---~~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~ 297 (450)
T 3gw9_A 222 EEEVNK---DSSTSDLLSGLLSAVYR-DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 297 (450)
T ss_dssp HHHHHT---SCCCCSHHHHHHHCBCT-TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHT
T ss_pred Hhhccc---CCccchHHHHHHHhhcc-CCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHH
Confidence 653211 22568999999987643 4456999999999999999999999999999999999 99999999999999
Q ss_pred HhhhcCCcccCcccc-cCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCC
Q 038386 350 GVVEQGQQWINEDDL-VKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPL 428 (523)
Q Consensus 350 ~~~~~~~~~~~~~~~-~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~ 428 (523)
++ +..++.+++ .+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus 298 ~~----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~ 371 (450)
T 3gw9_A 298 EF----PAQLNYNNVMDEMPFAERCARESIRRDPPLLML--MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 371 (450)
T ss_dssp TC----CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred hc----cCCCChHHHHHhcHHHHHHHHHHHHhCCchhcc--ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCcc
Confidence 87 256788999 99999999999999999999866 899999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCC-CCcccccceE
Q 038386 429 EFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADED-VDLSEKAEFT 507 (523)
Q Consensus 429 ~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~ 507 (523)
+|+|||+.. .+..|+|||+|+|.|+|++||++|+++++++||++|+|++.++. ++.. ..+++
T Consensus 372 ~F~PeR~~~----------------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~ 434 (450)
T 3gw9_A 372 RWDPERDEK----------------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPD-YHTMV 434 (450)
T ss_dssp SCCTTCCCS----------------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEE-TTSSS
T ss_pred ccCCCcCcC----------------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCc-cccce
Confidence 999999221 13679999999999999999999999999999999999998522 2222 23456
Q ss_pred Eeec-CceeEEEeecC
Q 038386 508 IEMK-NPLHARISPRV 522 (523)
Q Consensus 508 ~~~~-~~~~~~~~~r~ 522 (523)
..|+ .+++|++++|+
T Consensus 435 ~~p~~~~~~v~~~~R~ 450 (450)
T 3gw9_A 435 VGPTASQCRVKYIRRK 450 (450)
T ss_dssp CEECGGGCEEEEEECC
T ss_pred ecCCCCceEeEeeecC
Confidence 6777 79999999995
No 17
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=2.5e-73 Score=563.03 Aligned_cols=443 Identities=16% Similarity=0.252 Sum_probs=337.7
Q ss_pred CCCCC-CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 038386 37 NLPPG-PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA 115 (523)
Q Consensus 37 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 115 (523)
+.||| |+++|++||++.+ ..+++.++.+++++||+||++++++.++++|+||+.+++|+.+++..|++++......
T Consensus 4 ~~PPg~p~~~P~iG~~~~~---~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~ 80 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF---RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT 80 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH---TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred CCCCCCCCCCCCccCHHHH---hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH
Confidence 56898 8899999999987 3468899999999999999999999999999999999999977666787776542221
Q ss_pred ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386 116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA 195 (523)
Q Consensus 116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~ 195 (523)
.+++ .+++ . +|+.|+++|+++. ++|++..++ .+.+.+.++++++++.+.. ++.+|+.+++..+
T Consensus 81 --~~~g---~~~~-~-~~~~~~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~~~~------~~~vd~~~~~~~~ 143 (455)
T 2cib_A 81 --PIFG---EGVV-F-DASPERRKEMLHN---AALRGEQMK-GHAATIEDQVRRMIADWGE------AGEIDLLDFFAEL 143 (455)
T ss_dssp --HHHC----------------------------CCHHHHH-HHHHHHHHHHHHHHTTCCS------EEEEEHHHHHHHH
T ss_pred --hhcC---Cccc-c-CcHHHHHHHhhhc---cccCHHHHH-HHHHHHHHHHHHHHHHhCC------CCcEeHHHHHHHH
Confidence 2333 2343 2 7999999999999 999999999 9999999999999987632 4579999999999
Q ss_pred HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Q 038386 196 IFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQ 275 (523)
Q Consensus 196 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 275 (523)
++++++.++||.+++......+......+.... ..+..++|++. ...+++..++.+.+.+++.++|+++++...
T Consensus 144 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 217 (455)
T 2cib_A 144 TIYTSSACLIGKKFRDQLDGRFAKLYHELERGT--DPLAYVDPYLP----IESFRRRDEARNGLVALVADIMNGRIANPP 217 (455)
T ss_dssp HHHHHHHHHTCHHHHTTCCHHHHHHHHHHHTTC--CGGGGTCTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHcCCCcchhhhHHHHHHHHHHHhhh--hHHHHhcccCC----ChhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999998874311123333333332211 12223456442 122345566777888889999988876431
Q ss_pred hhhhccCCccchHHHHHHhhCCCCCCC-CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhc
Q 038386 276 ENEERDIDSESYVDTLIELRLPSDRKV-LEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQ 354 (523)
Q Consensus 276 ~~~~~~~~~~d~l~~ll~~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~ 354 (523)
.. ....|+++.|++...+ ++.. +++++++.++.++++||+|||+++++|++++|++||++|++|++||+++++.
T Consensus 218 ~~----~~~~dll~~ll~~~~~-~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~ 292 (455)
T 2cib_A 218 TD----KSDRDMLDVLIAVKAE-TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD 292 (455)
T ss_dssp --------CCCHHHHHHHCBCT-TSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGG
T ss_pred CC----CCcccHHHHHHHhhhh-cCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence 10 0234999999987643 2334 9999999999999999999999999999999999999999999999999886
Q ss_pred CCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCc
Q 038386 355 GQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPER 434 (523)
Q Consensus 355 ~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R 434 (523)
+ ..++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||
T Consensus 293 ~-~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR 369 (455)
T 2cib_A 293 G-RSVSFHALRQIPQLENVLKETLRLHPPLIIL--MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369 (455)
T ss_dssp C-CCHHHHTTSCCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGG
T ss_pred C-CCCCHHHHhcCHHHHHHHHHHHhcCCccccc--ceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCccc
Confidence 5 6788999999999999999999999998865 999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcc-cccceEEeecCc
Q 038386 435 FLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLS-EKAEFTIEMKNP 513 (523)
Q Consensus 435 fl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~ 513 (523)
|++.+.. ....+..|+|||.|+|.|+|++||++|+++++++||++|+|++.....++. ...+++..|+.+
T Consensus 370 ~l~~~~~---------~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~ 440 (455)
T 2cib_A 370 YEQPRQE---------DLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440 (455)
T ss_dssp GSTTTCH---------HHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSC
T ss_pred CCCCCcc---------cccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCC
Confidence 9965310 001246799999999999999999999999999999999999874222231 113455677779
Q ss_pred eeEEEeecC
Q 038386 514 LHARISPRV 522 (523)
Q Consensus 514 ~~~~~~~r~ 522 (523)
++|++++|+
T Consensus 441 ~~v~~~~R~ 449 (455)
T 2cib_A 441 AAVRYRRRT 449 (455)
T ss_dssp CEEEEEEC-
T ss_pred ceEEEEECc
Confidence 999999995
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=4.2e-73 Score=559.61 Aligned_cols=437 Identities=19% Similarity=0.271 Sum_probs=349.3
Q ss_pred CCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC
Q 038386 33 ISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST 112 (523)
Q Consensus 33 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~ 112 (523)
.++.+.||||+++|++||++.+.. ++. ++.+++++||+||++++++.+.|+|+||+.+++|+.++...|+.+.. .
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~---~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~ 82 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLN---DGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-L 82 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHH---CTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-H
T ss_pred CCCCCCCCCCCCCCccccHHHHhc---CcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-H
Confidence 445677999999999999988743 455 88899999999999998898899999999999999765555653211 1
Q ss_pred cccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH
Q 038386 113 SIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF 192 (523)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~ 192 (523)
... .+++. .++++ .+|+.|+++|+++. +.|++..++ .+.+.+.++++++++.|.. ++++|+.+++
T Consensus 83 ~~~--~~~g~--~~l~~-~~g~~~~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~------~~~vd~~~~~ 147 (444)
T 2ve3_A 83 STR--ILLGP--NALAT-QMGEIHRSRRKILY---QAFLPRTLD-SYLPKMDGIVQGYLEQWGK------ANEVIWYPQL 147 (444)
T ss_dssp HHH--HHHCT--TSGGG-CCHHHHHHHHHHHH---GGGCHHHHH-TTHHHHHHHHHHHHHHHHH------SSEEEHHHHH
T ss_pred HHH--HHhCc--ccccc-CCchHHHHHHHHHH---hhcCHHHHH-HHHHHHHHHHHHHHHHhcC------CCcEeHHHHH
Confidence 111 22332 24544 48999999999999 999999999 9999999999999999852 6789999999
Q ss_pred HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386 193 RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK 272 (523)
Q Consensus 193 ~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 272 (523)
..+++++++.++|| +.+.+. ..+......+..... .+|.... ...+++..+..+.+.+++.++|+++++
T Consensus 148 ~~~~~~vi~~~~fG-~~~~~~-~~~~~~~~~~~~~~~------~~~~~~p---~~~~~~~~~~~~~~~~~~~~~i~~r~~ 216 (444)
T 2ve3_A 148 RRMTFDVAATLFMG-EKVSQN-PQLFPWFETYIQGLF------SLPIPLP---NTLFGKSQRARALLLAELEKIIKARQQ 216 (444)
T ss_dssp HHHHHHHHHHHHTC-HHHHSC-TTHHHHHHHHHHHHS------SCCCCST---TSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC-CCcccH-HHHHHHHHHHHHHHh------cCCccCC---CcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999 342211 223332222222111 1232111 112345566777788888888888765
Q ss_pred HHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Q 038386 273 IKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVV 352 (523)
Q Consensus 273 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~ 352 (523)
.. ....|+++.|++...+ ++..++++++++++..+++||+|||+++++|++++|++||++|++||+|++.++
T Consensus 217 ~~-------~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~ 288 (444)
T 2ve3_A 217 QP-------PSEEDALGILLAARDD-NNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQ 288 (444)
T ss_dssp SC-------CCCSSHHHHHHHCBCT-TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSC
T ss_pred CC-------CCccCHHHHHHhcccc-CCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 31 1457999999987643 345699999999999999999999999999999999999999999999999988
Q ss_pred hcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCC
Q 038386 353 EQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKP 432 (523)
Q Consensus 353 ~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P 432 (523)
++ ..++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|||
T Consensus 289 ~~--~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P 364 (444)
T 2ve3_A 289 LS--QELTAETLKKMPYLDQVLQEVLRLIPPVGGG--FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDP 364 (444)
T ss_dssp CS--SCCCHHHHTTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCG
T ss_pred cC--CCCChhhhhcChHHHHHHHHHHhcCCCccCc--cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCc
Confidence 75 3789999999999999999999999999976 8999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecC
Q 038386 433 ERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKN 512 (523)
Q Consensus 433 ~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 512 (523)
|||++.+.. ....+..|+|||+|+|.|+|++||++|+++++++|+++|++++.+.. ++......++.|++
T Consensus 365 eR~l~~~~~---------~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~ 434 (444)
T 2ve3_A 365 ERFTPDGSA---------THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ-NLELVVTPSPRPKD 434 (444)
T ss_dssp GGSSTTSTT---------TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC-CCCEEESSSEEETT
T ss_pred cccCCCCcc---------cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC-CcceeccccccCCC
Confidence 999965310 01123569999999999999999999999999999999999987621 22333455778999
Q ss_pred ceeEEEeecC
Q 038386 513 PLHARISPRV 522 (523)
Q Consensus 513 ~~~~~~~~r~ 522 (523)
+++|++++|+
T Consensus 435 ~l~v~~~~r~ 444 (444)
T 2ve3_A 435 NLRVKLHSLM 444 (444)
T ss_dssp CCEEEEEEC-
T ss_pred CceEEEEeCC
Confidence 9999999984
No 19
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=1e-72 Score=560.77 Aligned_cols=444 Identities=18% Similarity=0.268 Sum_probs=350.8
Q ss_pred CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc
Q 038386 37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD 116 (523)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 116 (523)
+.||||+++|++||++++. .++++..+.+|+++||+||++++++.+.|+|+||+.+++|+.+ ..|.+... ....
T Consensus 3 ~~~PGP~~~p~iG~l~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~~- 76 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLN--TDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QALK- 76 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGC--SSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHHH-
T ss_pred CCCCCCCCCCccccHHHHh--cccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHHH-
Confidence 4589999999999998873 4567888999999999999999999999999999999999943 34543222 1111
Q ss_pred cceeeccccceeeC-cCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386 117 DLIFANKRRGISTY-PYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA 195 (523)
Q Consensus 117 ~~~~~~~~~~i~~~-~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~ 195 (523)
.+....+.++++. .+|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.... .++++|+.+++..+
T Consensus 77 -~~~~~~~~~l~~~~~~g~~w~~~Rr~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~~---~~~~vd~~~~~~~~ 148 (470)
T 2ij2_A 77 -FVRDFAGDGLFTSWTHEKNWKKAHNILL---PSFSQQAMK-GYHAMMVDIAVQLVQKWERLN---ADEHIEVPEDMTRL 148 (470)
T ss_dssp -HHHHHHTTSGGGSCTTSHHHHHHHHHHG---GGGSTTTHH-HHHHHHHHHHHHHHHHHHTCC---TTCCEEHHHHHHHH
T ss_pred -HHHHhcCCceEEcCCCchHHHHHHHHhc---cccCHHHHH-HHHHHHHHHHHHHHHHHHhhC---CCCeEEHHHHHHHH
Confidence 1111112355554 58999999999999 999999999 999999999999999987532 25689999999999
Q ss_pred HHHHhhhhhccCCcch---hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386 196 IFYLLVKMCFGNNVEE---QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK 272 (523)
Q Consensus 196 ~~~v~~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 272 (523)
++++++.++||.+++. +....+.......+...... ....|++.. +.....++..+..+.+.+++.++|+++++
T Consensus 149 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~ 225 (470)
T 2ij2_A 149 TLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK--LQRANPDDP-AYDENKRQFQEDIKVMNDLVDKIIADRKA 225 (470)
T ss_dssp HHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHT--C---CTTSG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcccccccCCCCHHHHHHHHHHHHHHHH--HhhhhhHhh-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998743 11122333332222211110 011133322 23334455667778888899999988765
Q ss_pred HHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Q 038386 273 IKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVV 352 (523)
Q Consensus 273 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~ 352 (523)
.. . ...|+++.|++...++++..++++++++++..+++||+|||+++++|++++|++||++|++|++|+++++
T Consensus 226 ~~---~----~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~ 298 (470)
T 2ij2_A 226 SG---E----QSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298 (470)
T ss_dssp HC---C----CCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred cc---c----CchhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence 42 1 3469999999876432345699999999999999999999999999999999999999999999999998
Q ss_pred hcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCC-EEeCCCCEEeeccccccCCCCCC-CCCCCC
Q 038386 353 EQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGG-YLVTKGISVNFLVADMGRDPNVW-EDPLEF 430 (523)
Q Consensus 353 ~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F 430 (523)
+. +.++.+++++||||+|||+|+||++|+++.. +|.+.+|++++| |.||||+.|.++.+++||||++| +||++|
T Consensus 299 ~~--~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~--~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F 374 (470)
T 2ij2_A 299 VD--PVPSYKQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374 (470)
T ss_dssp CS--SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSC
T ss_pred CC--CCCCHHHHhCCHHHHHHHHHHHhcCCCcccc--ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCcccc
Confidence 75 4589999999999999999999999999976 899999999999 99999999999999999999999 999999
Q ss_pred CCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEee
Q 038386 431 KPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEM 510 (523)
Q Consensus 431 ~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 510 (523)
+|||| +.. ....+..|+|||.|+|.|+|++||++|+++++++||++|+|+ .+...++....+++..|
T Consensus 375 ~PeR~-~~~-----------~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p 441 (470)
T 2ij2_A 375 RPERF-ENP-----------SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKP 441 (470)
T ss_dssp CGGGG-SSG-----------GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEE
T ss_pred Ccccc-CCC-----------CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecC
Confidence 99999 220 011236799999999999999999999999999999999999 43223333334556777
Q ss_pred cCceeEEEeecC
Q 038386 511 KNPLHARISPRV 522 (523)
Q Consensus 511 ~~~~~~~~~~r~ 522 (523)
. +++|++++|+
T Consensus 442 ~-~~~v~~~~R~ 452 (470)
T 2ij2_A 442 E-GFVVKAKSKK 452 (470)
T ss_dssp T-TCEEEEEECC
T ss_pred C-CeEEEEEEcc
Confidence 7 9999999995
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=6.1e-72 Score=555.22 Aligned_cols=443 Identities=16% Similarity=0.241 Sum_probs=353.1
Q ss_pred CCCCCCCC-CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC
Q 038386 34 STQNLPPG-PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST 112 (523)
Q Consensus 34 ~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~ 112 (523)
+..+.||| |+++|++||++++. .+++.++.+|+++||+||++++++.+.|+|++|+.+++++.++...+..++.+.
T Consensus 8 ~~~~~PPg~P~~lP~iG~l~~~~---~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 8 AGVKSPPYIFSPIPFLGHAIAFG---KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp --CCCCCBCCCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCCCCCccccHHhhc---cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 34578999 88999999999883 478899999999999999999999999999999999999987766665433322
Q ss_pred cccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH
Q 038386 113 SIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF 192 (523)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~ 192 (523)
... ..++| .++.+..+|+.|+++|+++. +.|+...++ .+.+.+.+++.++++.|.+ ++.+|+.+.+
T Consensus 85 ~~~-~~~~g---~g~~~~~~g~~w~~~Rr~~~---~~f~~~~l~-~~~~~~~~~~~~ll~~l~~------~~~~dl~~~~ 150 (461)
T 3i3k_A 85 RLT-TPVFG---KGVAYDVPNPVFLEQKKMLK---SGLNIAHFK-QHVSIIEKETKEYFESWGE------SGEKNVFEAL 150 (461)
T ss_dssp HHH-HHHHC---TTSGGGSCHHHHHHHHHHHH---HHSSHHHHH-HHHHHHHHHHHHHGGGGCS------EEEEEHHHHH
T ss_pred Hhh-hhhcC---CeeeeCCCcHHHHHHHHHHh---hhhCHHHHH-HHHHHHHHHHHHHHHHhhh------cCCcCHHHHH
Confidence 110 02333 35555557999999999999 999999999 9999999999999887743 4568999999
Q ss_pred HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHH
Q 038386 193 RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKK 272 (523)
Q Consensus 193 ~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 272 (523)
..+++++++.++||.++.......+......+.... ......+|.+.. ...+++..+..+.+.+++.+.|+++++
T Consensus 151 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~~l~---~~~~~~~~~~~~~~~~~~~~~i~~~~~ 225 (461)
T 3i3k_A 151 SELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGF--SHAAWLLPGWLP---LPSFRRRDRAHREIKDIFYKAIQKRRQ 225 (461)
T ss_dssp HHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTS--SHHHHHSCTTSC---CHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccHhhhhHHHHHHHHHHHHHHhcc--ccchhhcccccC---CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998764322222323222222111 112234553322 233456667778888888888887754
Q ss_pred HHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Q 038386 273 IKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVV 352 (523)
Q Consensus 273 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~ 352 (523)
.. ....|+++.+++...+ ++..+++++++.+++++++||+|||+.+++|++++|++||++|+++++|+++++
T Consensus 226 ~~-------~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~ 297 (461)
T 3i3k_A 226 SQ-------EKIDDILQTLLDATYK-DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVC 297 (461)
T ss_dssp CC-------CCCCSHHHHHHTCBCT-TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cc-------cccccHHHHHHHhhhc-cCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 31 1457999999987643 445699999999999999999999999999999999999999999999999999
Q ss_pred hcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCC
Q 038386 353 EQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKP 432 (523)
Q Consensus 353 ~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P 432 (523)
+.+...++.+++.++|||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|
T Consensus 298 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P 375 (461)
T 3i3k_A 298 GENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM--MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNP 375 (461)
T ss_dssp CTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCG
T ss_pred cCCCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc--ccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCC
Confidence 87655678999999999999999999999999755 9999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecC
Q 038386 433 ERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKN 512 (523)
Q Consensus 433 ~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 512 (523)
|||++.+. ....+..|+|||+|+|.|||++||.+|++++++.||++|+|++.++..+......++..|.+
T Consensus 376 ~Rfl~~~~----------~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~ 445 (461)
T 3i3k_A 376 DRYLQDNP----------ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPEN 445 (461)
T ss_dssp GGGGSCCH----------HHHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSS
T ss_pred CCCCCCCC----------CCCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCC
Confidence 99997631 01124689999999999999999999999999999999999998732222223455667777
Q ss_pred ceeEEE
Q 038386 513 PLHARI 518 (523)
Q Consensus 513 ~~~~~~ 518 (523)
++.++-
T Consensus 446 ~~~~~~ 451 (461)
T 3i3k_A 446 PVIRYK 451 (461)
T ss_dssp CEEEEE
T ss_pred ceEEee
Confidence 765543
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=3.6e-71 Score=550.12 Aligned_cols=436 Identities=20% Similarity=0.310 Sum_probs=326.6
Q ss_pred CCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCccc-ccCCCCCccc
Q 038386 37 NLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVF-ADRPKSTSIA 115 (523)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~-~~~~~~~~~~ 115 (523)
..||||+++|++||++.+. .+++.++.++++ ||+||++++++.++++|+||+.+++|+.++ .| .+.+......
T Consensus 23 eppPgP~~~P~iG~~~~~~---~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~ 96 (467)
T 3dbg_A 23 EPPVAGGGVPLLGHGWRLA---RDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE 96 (467)
T ss_dssp BCCEECCCCSTTHHHHHHH---HCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-----------
T ss_pred CCCCCCCCCCcccchHHhc---cCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH
Confidence 4589999999999999884 478899999998 999999999999999999999999999765 55 3333332222
Q ss_pred ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHH
Q 038386 116 DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYA 195 (523)
Q Consensus 116 ~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~ 195 (523)
.+++. .+++. .+|+.|+++|+++. ++|+...++ .+.+.+.+.+.++++.+.+ ++++|+.+.+..+
T Consensus 97 --~~~g~--~~l~~-~dg~~h~~~R~~l~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~ 161 (467)
T 3dbg_A 97 --GLLGK--EGVAT-ANGPLHRRQRRTIQ---PAFRLDAIP-AYGPIMEEEAHALTERWQP------GKTVDATSESFRV 161 (467)
T ss_dssp ------------------------CGGGH---HHHSTTTST-TTHHHHHHHHHHHHHHSCT------TSCEEHHHHHHHH
T ss_pred --HhcCC--CCccc-CCcHHHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHhcc------CCcCcHHHHHHHH
Confidence 33331 24444 58999999999999 999999999 9999999999999998742 6789999999999
Q ss_pred HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccc--cchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHH
Q 038386 196 IFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPD--LGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKI 273 (523)
Q Consensus 196 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 273 (523)
++++++.++||.+++.+....+......+.... ....++|+ +.. +.....++..+..+.+.+++.++++++++.
T Consensus 162 ~~~vi~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 237 (467)
T 3dbg_A 162 AVRVAARCLLRGQYMDERAERLCVALATVFRGM---YRRMVVPLGPLYR-LPLPANRRFNDALADLHLLVDEIIAERRAS 237 (467)
T ss_dssp HHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCcccchhHHHHHHHHHHHHHHH---HHHhccchhhhhh-CCChHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999987655555555554443322 12223342 111 222234556677788888888888877543
Q ss_pred HhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Q 038386 274 KQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVE 353 (523)
Q Consensus 274 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 353 (523)
. ....|+++.|++...+ ++..+++++++.+++.+++||+|||+.+++|++++|++||++|++||+|++++++
T Consensus 238 ~-------~~~~dll~~ll~~~~~-~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~ 309 (467)
T 3dbg_A 238 G-------QKPDDLLTALLEAKDD-NGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG 309 (467)
T ss_dssp C-------SSCCSHHHHHTTC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred C-------CCchHHHHHHHhhccC-CCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 1 1456999999987643 3346999999999999999999999999999999999999999999999999987
Q ss_pred cCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCC
Q 038386 354 QGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPE 433 (523)
Q Consensus 354 ~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~ 433 (523)
+ ..++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+
T Consensus 310 ~--~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe 385 (467)
T 3dbg_A 310 G--RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVL--TRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPD 385 (467)
T ss_dssp T--SCCCHHHHTTCHHHHHHHHHHHHHSCSCCCE--EEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGG
T ss_pred C--CCCCHHHHhhCHHHHHHHHHHhhcCCCcccc--ceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCc
Confidence 5 6789999999999999999999999999866 99999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCc
Q 038386 434 RFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNP 513 (523)
Q Consensus 434 Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 513 (523)
||++.+.. ...+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++. +.....+++++|+ +
T Consensus 386 Rfl~~~~~----------~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~-~ 453 (467)
T 3dbg_A 386 RWLPERAA----------NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS-NDAVRVGITLRPH-D 453 (467)
T ss_dssp GGSHHHHT----------TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-EEEEEESSSEEEE-E
T ss_pred cCCCCccc----------cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC-CCccceeeEecCC-C
Confidence 99976310 1124679999999999999999999999999999999999988622 2333345566654 6
Q ss_pred eeEEEeec
Q 038386 514 LHARISPR 521 (523)
Q Consensus 514 ~~~~~~~r 521 (523)
+.++-..|
T Consensus 454 l~~~~~~~ 461 (467)
T 3dbg_A 454 LLVRPVAR 461 (467)
T ss_dssp CEEEEEEC
T ss_pred Cccchhhh
Confidence 66665544
No 22
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=1.2e-69 Score=538.20 Aligned_cols=427 Identities=20% Similarity=0.312 Sum_probs=342.2
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc-ccccceeec--cccceeeCcCCc
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS-IADDLIFAN--KRRGISTYPYGT 134 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~i~~~~~g~ 134 (523)
+..+++.+.+|+++||+||++++|+.+.|+|+||+.+++|+.+ ..|.+++.... .. ..++. .+.++++..+|+
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~ 84 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQ--TVFGERLFGQGLVSECNYE 84 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHH--EETTEESSTTSTTTCCCHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHH--HhhcccccCCCcccCCChH
Confidence 4467888999999999999999999999999999999999953 34544433211 11 11111 123566666899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcchh--
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQ-- 212 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~-- 212 (523)
.|+++|++++ ++|+...++ .+.+.+.+.++.+++.+.+... +++++|+.+++..+++++++.++||.+++..
T Consensus 85 ~w~~~Rr~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~ 158 (456)
T 3mdm_A 85 RWHKQRRVID---LAFSRSSLV-SLMETFNEKAEQLVEILEAKAD--GQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG 158 (456)
T ss_dssp HHHHHHHHHG---GGGSHHHHH-TTHHHHHHHHHHHHHHHHHTCS--SSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT
T ss_pred HHHHHHhhcc---cccCHHHHH-HHHHHHHHHHHHHHHHHHHhcC--CCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc
Confidence 9999999999 999999999 9999999999999999987654 4678999999999999999999999988421
Q ss_pred HHHHHHHHHHHHHHHHhh--hhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHH
Q 038386 213 EIRELGCAQKKLFMIINK--LKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDT 290 (523)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ 290 (523)
....+......+...... ..+..++|.. ....+...+..+.+.+++.++++++++....+. ....|+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~---~~~~d~l~~ 230 (456)
T 3mdm_A 159 AQKPLSQAVKLMLEGITASRNTLAKFLPGK-----RKQLREVRESIRFLRQVGRDWVQRRREALKRGE---EVPADILTQ 230 (456)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCGGGCGGG-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCCCCHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhCchh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cchhhHHHH
Confidence 112233333332222111 1111122211 122345556677778888888888877653221 245699999
Q ss_pred HHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhH
Q 038386 291 LIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYL 370 (523)
Q Consensus 291 ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L 370 (523)
+++.. ++.++++++++++.++++||+|||+++++|++++|++||++|++|++|++++++.+ ..++.+++.+||||
T Consensus 231 ll~~~----~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl 305 (456)
T 3mdm_A 231 ILKAE----EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK-RYLDFEDLGRLQYL 305 (456)
T ss_dssp HHHHT----SSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-SSCCHHHHHHCHHH
T ss_pred HHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCC-CCCCHHHHhcCHHH
Confidence 99864 34588999999999999999999999999999999999999999999999999875 67899999999999
Q ss_pred HHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccc
Q 038386 371 KAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDI 450 (523)
Q Consensus 371 ~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~ 450 (523)
+|||+|+||++|+++.. +|.+++|++++||.|||||.|.++.+++||||++|+||++|+||||++.+.
T Consensus 306 ~a~i~E~lRl~p~~~~~--~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---------- 373 (456)
T 3mdm_A 306 SQVLKESLRLYPPAWGT--FRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---------- 373 (456)
T ss_dssp HHHHHHHHHHCCSSCCE--EEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC----------
T ss_pred HHHHHHHHHhCCCcccc--ccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC----------
Confidence 99999999999999966 899999999999999999999999999999999999999999999997631
Q ss_pred cccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 451 TRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 451 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
.....|+|||.|+|.|+|++||++|+++++++|+++|+|++.++. ++.....+++.|+++++|++++|.
T Consensus 374 --~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~r~ 442 (456)
T 3mdm_A 374 --KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ-RFGLQEQATLKPLDPVLCTLRPRG 442 (456)
T ss_dssp --CCSSSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-CCCEEESSSEEESSCCEEEEEECC
T ss_pred --CCCCcccCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC-cceeecceEEecCCCeEEEEEEcC
Confidence 123679999999999999999999999999999999999988622 233334567899999999999985
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=1.3e-67 Score=528.16 Aligned_cols=453 Identities=16% Similarity=0.180 Sum_probs=340.2
Q ss_pred cCCCCCCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCC
Q 038386 32 EISTQNLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPK 110 (523)
Q Consensus 32 ~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~ 110 (523)
++...+.||||++ +|++||++.+ ..+++.++.+++++||+||++++++.++++|++|+.+++++.++ +.+.....
T Consensus 8 ~~~~~~~PPgp~~~lPliG~~~~~---~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~-~~~~~~~~ 83 (491)
T 3v8d_A 8 RRRQTGEPPLENGLIPYLGCALQF---GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHG-KYFDWKKF 83 (491)
T ss_dssp CCCCTTSCCEEEEEESSTTTTGGG---TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCC-TTEESSHH
T ss_pred hccCCCCCCCCCCCcceeccHHHH---hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcC-CccchHHH
Confidence 3445678999998 6999999998 56899999999999999999999999999999999999999543 32322221
Q ss_pred CCc-ccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhh-cCCCeeeh
Q 038386 111 STS-IADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCE-CRGDGVYV 188 (523)
Q Consensus 111 ~~~-~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~vd~ 188 (523)
... .. .++|. +.....+|+.|+++|+.+. ++|++..++ .+.+.+.+++.++++.+.....+ ..+..+++
T Consensus 84 ~~~~~~--~~~g~---~~~~~~~g~~~~~~Rr~~~---~~f~~~~l~-~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l 154 (491)
T 3v8d_A 84 HFALSA--KAFGH---RSIDPMDGNTTENINDTFI---KTLQGHALN-SLTESMMENLQRIMRPPVSSNSKTAAWVTEGM 154 (491)
T ss_dssp HHHHHH--HHHTC---CCCCGGGSSBCCCHHHHHH---HHHSHHHHH-HHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEH
T ss_pred HHHHHH--HhcCC---cccccccchhHHHHHHHHH---HHcCccchH-HHHHHHHHHHHHHHHhhhhcccCCCCCcccCH
Confidence 111 11 33332 2223347999999999998 999999999 99999999999988754322211 12567899
Q ss_pred hHHHHHHHHHHhhhhhccCCcc--hhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHH
Q 038386 189 CEHFRYAIFYLLVKMCFGNNVE--EQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGL 266 (523)
Q Consensus 189 ~~~~~~~~~~v~~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (523)
.+++..+++++++..+||.+++ ++....+......+... ...+|.+...++...+++..++.+.+.+++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~ 228 (491)
T 3v8d_A 155 YSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHE 228 (491)
T ss_dssp HHHHHHHHHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHHHHHHcCccccccchhhhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999874 22223333333333221 222332222122223345555556555555544
Q ss_pred HHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHH
Q 038386 267 VRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILD 346 (523)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 346 (523)
+.+++ + ...|+++.++.... +.+.+++++++.+++.+++||++||+.+++|++++|++||++|++|++
T Consensus 229 ~~~~~------~----~~~d~l~~l~~~~~--~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~ 296 (491)
T 3v8d_A 229 NLQKR------E----SISELISLRMFLND--TLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATE 296 (491)
T ss_dssp HHTTC------B----SCCHHHHHHHHHHH--HHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHhcc------c----cccHHHHHHHHHhh--ccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 43221 1 44789999987663 334699999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCC---------cccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee----CCEEeCCCCEEeec
Q 038386 347 EINGVVEQGQ---------QWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL----GGYLVTKGISVNFL 413 (523)
Q Consensus 347 Ei~~~~~~~~---------~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~ 413 (523)
||+++++.++ ..++.+++.++|||+|||+|+||++|+ +. ++|.+.+|+++ +||.||||+.|.++
T Consensus 297 Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~--~~R~~~~d~~~~~~~~g~~ip~G~~v~~~ 373 (491)
T 3v8d_A 297 EVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL--NIRTAKEDFTLHLEDGSYNIRKDDIIALY 373 (491)
T ss_dssp HHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC--EEEEESSSEEEECSSCEEEECTTCEEEEC
T ss_pred HHHHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc--cceeccCCeeEeecCCcEEeCCCCEEEec
Confidence 9999987642 347788899999999999999999984 44 48999999999 99999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEe
Q 038386 414 VADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNK 493 (523)
Q Consensus 414 ~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~ 493 (523)
.+++|+||++|+||++|+|+||++.+......... .....+..|+|||+|+|.|+|++||.+|++++++.|+++|+|++
T Consensus 374 ~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~-~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~ 452 (491)
T 3v8d_A 374 PQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYC-NGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELEL 452 (491)
T ss_dssp THHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEE-TTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred chhhcCCcccCCCccccCcccccCCCCCccccccc-ccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEe
Confidence 99999999999999999999999764211100000 00113468999999999999999999999999999999999999
Q ss_pred cCC---CCCcc--cccceEEeecCceeEEEe
Q 038386 494 ADE---DVDLS--EKAEFTIEMKNPLHARIS 519 (523)
Q Consensus 494 ~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 519 (523)
.++ .++.+ .....++.|+.++.|+++
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~ 483 (491)
T 3v8d_A 453 IEGQAKCPPLDQSRAGLGILPPLNDIEFKYK 483 (491)
T ss_dssp C---CCCCCBCGGGTBEEECCBSSCCEEEEE
T ss_pred CCCCCCCCCCCcccCcCcccCCCCCeEEEEE
Confidence 872 22222 222346677888888876
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=3.5e-67 Score=525.75 Aligned_cols=455 Identities=16% Similarity=0.187 Sum_probs=321.7
Q ss_pred CCCCCCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386 33 ISTQNLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS 111 (523)
Q Consensus 33 ~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~ 111 (523)
+...+.||||++ +|++||++++ ..+++.++.+|+++||+||++++|+.++|+|+||+.+++|+.++.. ++.++..
T Consensus 9 ~~~~~~pPgp~~~~P~iG~~~~~---~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~ 84 (491)
T 3dax_A 9 RRQTGEPPLENGLIPYLGCALQF---GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFH 84 (491)
T ss_dssp CCCTTCCCEEEEEESCTTTTGGG---TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHH
T ss_pred ccCCCCCCcCCCcccchhhHHHH---hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHH
Confidence 334567999988 8999999988 3468899999999999999999999999999999999999954431 3222211
Q ss_pred CcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHh-hhcCCCeeehhH
Q 038386 112 TSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREY-CECRGDGVYVCE 190 (523)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~vd~~~ 190 (523)
.... ...+|. +++...+|+.|+++|+.+. +.|+...+. .+.+.+.+.+.++++...... +...+..+|+..
T Consensus 85 ~~~~-~~~~g~---~~~~~~~g~~w~~~r~~~~---~~f~~~~l~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 156 (491)
T 3dax_A 85 FATS-AKAFGH---RSIDPMDGNTTENINDTFI---KTLQGHALN-SLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYS 156 (491)
T ss_dssp HHHH-HHHHTC---CCCCGGGTSBCCCHHHHHH---HHHSHHHHH-HHHHHHHHHHHHHHC----------CCEEEEHHH
T ss_pred HHHH-HHHcCC---CcccccchhHHHHHHHHHH---HhcCcccHH-HHHHHHHHHHHHHHHhhccCCcCCCCceeccHHH
Confidence 1100 012222 3331337889999999998 889988888 777777777766665543221 001345789999
Q ss_pred HHHHHHHHHhhhhhccCCcchh--HHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHH
Q 038386 191 HFRYAIFYLLVKMCFGNNVEEQ--EIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVR 268 (523)
Q Consensus 191 ~~~~~~~~v~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 268 (523)
.+..+++++++.++||.+++.. ..+.+......+.. +...+|++.+.++...+++..+..+.+.+.+ ++
T Consensus 157 ~~~~~i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~ 227 (491)
T 3dax_A 157 FCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESL---RH 227 (491)
T ss_dssp HHHHHHHHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SH
T ss_pred HHHHHHHHHhHHHHcCcccccccchhhhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HH
Confidence 9999999999999999887432 22222222222111 1223443322111111122222222222221 12
Q ss_pred HHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHH
Q 038386 269 DRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEI 348 (523)
Q Consensus 269 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei 348 (523)
++.+. . ....|+++.+++... +.+.+++++++++++.+++||+|||+++++|++++|++||++|++|++||
T Consensus 228 ~~~~~---~----~~~~d~l~~ll~~~~--~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei 298 (491)
T 3dax_A 228 ENLQK---R----ESISELISLRMFLND--TLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEV 298 (491)
T ss_dssp HHHTT---C----BSCCHHHHHHHHHHH--HHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHhhc---c----cchhHHHHHHHHHHH--hcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 21111 1 145789998887652 22358899999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCc---------ccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee----CCEEeCCCCEEeeccc
Q 038386 349 NGVVEQGQQ---------WINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL----GGYLVTKGISVNFLVA 415 (523)
Q Consensus 349 ~~~~~~~~~---------~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~~~ 415 (523)
+++++.+.. .++.+++++||||+|||+||||++|+ +. ++|.+.+|+++ +||.|||||.|.++.+
T Consensus 299 ~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~--~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~ 375 (491)
T 3dax_A 299 KRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL--NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQ 375 (491)
T ss_dssp HHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC--EEEEESSSEEEEETTEEEEECTTCEEEECTH
T ss_pred HHHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc--ceeEecCCeEeecCCCcEEeCCCCEEEechH
Confidence 999875421 35899999999999999999999985 54 48999999999 7899999999999999
Q ss_pred cccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecC
Q 038386 416 DMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKAD 495 (523)
Q Consensus 416 ~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~ 495 (523)
++|+||++|+||++|+||||++.+........ ......+..|+|||+|+|.|||++||++|+++++++||++|+|++.+
T Consensus 376 ~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~-~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~ 454 (491)
T 3dax_A 376 LMHLDPEIYPDPLTFKYDRYLDENGKTKTTFY-CNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIE 454 (491)
T ss_dssp HHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCE-ETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETT
T ss_pred hhcCCcccCCCHHHcCCccccCCCcccccccc-ccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEcc
Confidence 99999999999999999999965311000000 00001246899999999999999999999999999999999999976
Q ss_pred CC---CCccc-ccce-EEeecCceeEEEeec
Q 038386 496 ED---VDLSE-KAEF-TIEMKNPLHARISPR 521 (523)
Q Consensus 496 ~~---~~~~~-~~~~-~~~~~~~~~~~~~~r 521 (523)
+. ++... ..++ +..|+.++.++++.+
T Consensus 455 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~ 485 (491)
T 3dax_A 455 GQAKCPPLDQSRAGLGILPPLNDIEFKYKFK 485 (491)
T ss_dssp TTCCCCCBCGGGTBEEECCBSSCCEEEEEEC
T ss_pred CCCCCCCCCcccccccccCCCCCceEEEEec
Confidence 31 22222 1233 457777888887764
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=3.7e-65 Score=511.55 Aligned_cols=456 Identities=15% Similarity=0.141 Sum_probs=316.7
Q ss_pred cCCCCCCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCC
Q 038386 32 EISTQNLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPK 110 (523)
Q Consensus 32 ~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~ 110 (523)
.++..+.||||++ +|++||++++. .+++.++.+|+++||+||++++|+.++|+|+||+.+++++.++...++.++.
T Consensus 13 ~~~~~~~PPgp~~~~P~iG~~~~~~---~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~ 89 (498)
T 3b6h_A 13 RTRRPGEPPLDLGSIPWLGYALDFG---KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAY 89 (498)
T ss_dssp CCCCTTCCCEECCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHH
T ss_pred hccCCCCCCCCCCCCcchhhHHHhc---cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhh
Confidence 3445578999998 89999999883 3678999999999999999999999999999999999999655432433332
Q ss_pred CCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhH
Q 038386 111 STSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCE 190 (523)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~ 190 (523)
..... ...+|. +++. .+|+.| |+++. +.|+...++ .+.+.+.+.+...++....... ..+..+++..
T Consensus 90 ~~~~~-~~~~g~---~~~~-~~~~~~---rr~~~---~~~~~~~l~-~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~l~~ 156 (498)
T 3b6h_A 90 AIFLM-ERIFDV---QLPH-YSPSDE---KARMK---LTLLHRELQ-ALTEAMYTNLHAVLLGDATEAG-SGWHEMGLLD 156 (498)
T ss_dssp HHHHH-HHTSCC---CCTT-CCHHHH---HHHHH---TTSSHHHHH-HHHHHHHHHHHHHHHHHHHHHC-SSCEEEEHHH
T ss_pred HHHHH-HHHcCC---Cccc-cCHHHH---HHHHH---HhhchHhHH-HHHHHHHHHHHHHHhhcccccC-CCcceecHHH
Confidence 11110 022332 3333 356665 45555 678777777 7766666666665555432211 1345689999
Q ss_pred HHHHHHHHHhhhhhccCCcchhHH---HHHHHHHHHHHHHHhhhhHHhhccccchh-hhHHHHHHHHHhHHhHHHHHHHH
Q 038386 191 HFRYAIFYLLVKMCFGNNVEEQEI---RELGCAQKKLFMIINKLKVFAIMPDLGKI-LFRKRWKKFLGIIRSREDVFVGL 266 (523)
Q Consensus 191 ~~~~~~~~v~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 266 (523)
.+..+++++++.++||.+++.+.. .........+..... .+...+|++.+. +....+++..++.+.+.+. +
T Consensus 157 ~~~~vi~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~ 231 (498)
T 3b6h_A 157 FSYSFLLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKL---L 231 (498)
T ss_dssp HHHHHHHHHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH---T
T ss_pred HHHHHHHHHHHHhhcCcccccccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHH---H
Confidence 999999999999999987632111 111122222222111 122344533221 1112222333333332221 1
Q ss_pred HHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHH
Q 038386 267 VRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILD 346 (523)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 346 (523)
++++.+. . ....|+++.+++...+ .+.++++++. .++.+++||++||+++++|++++|++||++|++|++
T Consensus 232 ~~~~~~~----~---~~~~d~l~~ll~~~~~--~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~ 301 (498)
T 3b6h_A 232 SPARLAR----R---AHRSKWLESYLLHLEE--MGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRG 301 (498)
T ss_dssp CHHHHTT----C---BSCCHHHHHHHHHHHH--TTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHhc----c---ccHHHHHHHHHHHHHh--CCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHH
Confidence 1221111 1 1456999999876532 2346778887 888899999999999999999999999999999999
Q ss_pred HHHHhhhcCCc------ccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee-----CCEEeCCCCEEeeccc
Q 038386 347 EINGVVEQGQQ------WINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL-----GGYLVTKGISVNFLVA 415 (523)
Q Consensus 347 Ei~~~~~~~~~------~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~-----~g~~ip~G~~v~~~~~ 415 (523)
|++++++.+.. .++.+++.+||||+|||+|+||++|+ +. ++|.+.+|+.+ +||.|||||.|.++.+
T Consensus 302 Ei~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~--~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~ 378 (498)
T 3b6h_A 302 ELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF--ITREVVVDLAMPMADGREFNLRRGDRLLLFPF 378 (498)
T ss_dssp HHHHHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BC--EEEEECSCEEEECTTSCEEEECTTCEEEECTC
T ss_pred HHHHHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc--ceeeecCCeeeecCCCCeEEeCCCCEEEeCch
Confidence 99999886421 25899999999999999999999985 54 48999999998 6899999999999999
Q ss_pred c-ccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEec
Q 038386 416 D-MGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKA 494 (523)
Q Consensus 416 ~-~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~ 494 (523)
+ +|+||++|+||++|+||||++.+......... .....+..|+|||+|+|.|||++||++|+++++++||++|+|++.
T Consensus 379 ~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~-~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~ 457 (498)
T 3b6h_A 379 LSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYK-DGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELI 457 (498)
T ss_dssp CCCCTCTTTSSSTTSCCTTTTBCTTSSBCCCCEE-TTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEES
T ss_pred HhhcCCccccCChhhcCcccccCCCccccccccc-ccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeC
Confidence 9 99999999999999999999753210000000 000124689999999999999999999999999999999999997
Q ss_pred CCC---CCccc--ccceEEeecCceeEEEeecC
Q 038386 495 DED---VDLSE--KAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 495 ~~~---~~~~~--~~~~~~~~~~~~~~~~~~r~ 522 (523)
++. ++... ....+..|+.+++|++++|-
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 490 (498)
T 3b6h_A 458 NADVEIPEFDLSRYGFGLMQPEHDVPVRYRIRP 490 (498)
T ss_dssp STTCCCCCBCGGGTBSSBCCBSSCCEEEEEECC
T ss_pred CCCCCCCCCCccccccccCCCCCCccEEEEecc
Confidence 631 22221 22234577778999998873
No 26
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=4.4e-65 Score=499.16 Aligned_cols=400 Identities=17% Similarity=0.156 Sum_probs=309.5
Q ss_pred CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 038386 36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKSTSI 114 (523)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 114 (523)
.+.||||+++|++|++...+ ..+++.++.++ ++||+||++++ ++.++|+|+||+.+++|+.++ .|++++... +
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~--~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~-~ 98 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDF--AADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNS-T 98 (436)
T ss_dssp ---------CCBHHHHHHHH--HHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGC-S
T ss_pred ccCCCCCCccccCCCCCccc--ccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccc-c
Confidence 45699999999999986321 34788999999 99999999998 778899999999999999765 577765421 1
Q ss_pred ccccee---eccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH
Q 038386 115 ADDLIF---ANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH 191 (523)
Q Consensus 115 ~~~~~~---~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~ 191 (523)
. ... ...+.++++ .+|+.|+++|+++. ++|++..++ .+.+.+.+.++++++.|.+. .++++|+.++
T Consensus 99 ~--~~~~~~~~~~~~l~~-~dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~ 167 (436)
T 2cd8_A 99 T--PLTEAEAALNHNMLE-SDPPRHTRLRKLVA---REFTMRRVE-LLRPRVQEIVDGLVDAMLAA----PDGRADLMES 167 (436)
T ss_dssp S--CCCTTGGGTCCSGGG-CCTTHHHHHHHHHG---GGSSHHHHH-TTHHHHHHHHHHHHHHHHTC----TTSCEEHHHH
T ss_pred c--ccccccccccccccc-cCchHHHHHHHHhH---HhhCHHHHH-HHHHHHHHHHHHHHHHHHhc----cCCCcchHHH
Confidence 1 110 111234544 58999999999999 999999999 99999999999999999741 2568999997
Q ss_pred H-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386 192 F-RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR 270 (523)
Q Consensus 192 ~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 270 (523)
+ ..+++++++. +||.+.++ .+.+..+...+.. ..+ . ++..+..+.+.+++.++|+++
T Consensus 168 ~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~~~~---------~~~------~----~~~~~~~~~~~~~~~~~i~~r 225 (436)
T 2cd8_A 168 LAWPLPITVISE-LLGVPEPD--RAAFRVWTDAFVF---------PDD------P----AQAQTAMAEMSGYLSRLIDSK 225 (436)
T ss_dssp TTTHHHHHHHHH-HHTCCGGG--HHHHHHHHHHHHS---------CSS------T----THHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCHHH--HHHHHHHHHHHhc---------cCC------H----HHHHHHHHHHHHHHHHHHHHH
Confidence 7 5799999998 79988643 2233333222111 000 0 334556777888888888877
Q ss_pred HHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHH
Q 038386 271 KKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEING 350 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~ 350 (523)
++. ...|+++.|++...+ ++..++++++++++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 226 ~~~---------~~~d~l~~ll~~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~-- 293 (436)
T 2cd8_A 226 RGQ---------DGEDLLSALVRTSDE-DGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM-- 293 (436)
T ss_dssp TTS---------CCCSHHHHHHHHHHH-CTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG--
T ss_pred hcC---------CCCCHHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh--
Confidence 542 346899999987632 24569999999999999999999999999999999999999999999984
Q ss_pred hhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCC
Q 038386 351 VVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEF 430 (523)
Q Consensus 351 ~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F 430 (523)
.||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|
T Consensus 294 -----------------~~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 355 (436)
T 2cd8_A 294 -----------------TLLDGAVEEMLRYEGPVESA-TYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355 (436)
T ss_dssp -----------------GGHHHHHHHHHHHHCSBSSC-CCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSC
T ss_pred -----------------hhHHHHHHHHHHhcCcccCc-eeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCcccc
Confidence 27999999999999999955 599999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEe
Q 038386 431 KPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIE 509 (523)
Q Consensus 431 ~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~ 509 (523)
+|||| . ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+..++....+.++.
T Consensus 356 ~PeR~--~-----------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~ 416 (436)
T 2cd8_A 356 DIRRD--T-----------------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIR 416 (436)
T ss_dssp CTTSC--C-----------------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBC
T ss_pred CCCCC--C-----------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccC
Confidence 99995 1 3589999999999999999999999999999999 69986422222323344567
Q ss_pred ecCceeEEEeecCC
Q 038386 510 MKNPLHARISPRVN 523 (523)
Q Consensus 510 ~~~~~~~~~~~r~~ 523 (523)
++.+++|++++|++
T Consensus 417 ~~~~l~v~~~~r~~ 430 (436)
T 2cd8_A 417 GLKALPIRWRRGRE 430 (436)
T ss_dssp CBSCCEEC------
T ss_pred CcceeEEEEecCcc
Confidence 78899999999863
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=4.6e-64 Score=491.01 Aligned_cols=405 Identities=17% Similarity=0.158 Sum_probs=320.7
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeecc
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANK 123 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (523)
.|++||++.+. .+++.++.+++++|| +||++++++.++|++++|+.++.++ +...|.+++.........++|.
T Consensus 8 ~P~lG~~~~~~---~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~g~- 81 (417)
T 1izo_A 8 DKSLDNSLTLL---KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY--DTDRFQRQNALPKRVQKSLFGV- 81 (417)
T ss_dssp CCCTTHHHHHH---HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT--CTTTEECTTCSCHHHHTTTTCT-
T ss_pred CCccchHHHHh---hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh--cccccccccccccchhhhhccc-
Confidence 38999999884 478899999999998 8999999999999999999998654 3345665433221000023332
Q ss_pred ccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhh
Q 038386 124 RRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKM 203 (523)
Q Consensus 124 ~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~ 203 (523)
.+++ ..+|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.|.. ++++|+.+++..+++++++.+
T Consensus 82 -~~l~-~~dg~~h~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~dl~~~~~~~~~~vi~~~ 149 (417)
T 1izo_A 82 -NAIQ-GMDGSAHIHRKMLFL---SLMTPPHQK-RLAELMTEEWKAAVTRWEK------ADEVVLFEEAKEILCRVACYW 149 (417)
T ss_dssp -TCGG-GCCHHHHHHHHHHHH---HTSSHHHHH-HHHHHHHHHHHHHHHHHTT------SSEEEHHHHHHHHHHHHHHHH
T ss_pred -ccee-ecCChHHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHhc------CCCeeHHHHHHHHHHHHHHHH
Confidence 2444 448999999999999 999999999 9999999999999998853 678999999999999999998
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCC
Q 038386 204 CFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDID 283 (523)
Q Consensus 204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 283 (523)
||.++++.....+......+... +..+. ..+++..+..+.+.+++.++|+++++.... ..
T Consensus 150 -~G~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-----~~ 209 (417)
T 1izo_A 150 -AGVPLKETEVKERADDFIDMVDA---------FGAVG-----PRHWKGRRARPRAEEWIEVMIEDARAGLLK-----TT 209 (417)
T ss_dssp -HTCCCCTTTHHHHHHHHHHHHHH---------TTCCS-----HHHHHHHHHHHHHHHHHHHHHHHHHTTSSC-----CC
T ss_pred -cCCCCCchHHHHHHHHHHHHHhh---------cccCC-----ccchhHHHHHHHHHHHHHHHHHHHHhhccC-----CC
Confidence 69988654333333322222211 11111 112345567788889999999888764211 13
Q ss_pred ccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCccc
Q 038386 284 SESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDD 363 (523)
Q Consensus 284 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 363 (523)
..|+++.|+....+ ++..++++++..++..++ ||++||+++++|++++|++||++|++|++|
T Consensus 210 ~~d~l~~ll~~~~~-~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E---------------- 271 (417)
T 1izo_A 210 SGTALHEMAFHTQE-DGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG---------------- 271 (417)
T ss_dssp TTSHHHHHHHCBCT-TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC----------------
T ss_pred cCCHHHHHHHhccc-cCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc----------------
Confidence 46899999987532 344688888877776654 999999999999999999999999999987
Q ss_pred ccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCC
Q 038386 364 LVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNG 443 (523)
Q Consensus 364 ~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~ 443 (523)
++|||+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|+||++.+
T Consensus 272 --~~~~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~---- 343 (417)
T 1izo_A 272 --NSREREMFVQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE---- 343 (417)
T ss_dssp --CHHHHHHHHHHHHHHSCCCCEE--EEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC----
T ss_pred --CCHHHHHHHHHHhhcCCccccc--ceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC----
Confidence 3689999999999999999976 89999999999999999999999999999999999999999999999652
Q ss_pred CCCCccccccCcccccccCCC----CCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCceeEEEe
Q 038386 444 GKNNLDITRNREIKMMPFGAG----RRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLHARIS 519 (523)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (523)
..+..|+|||+| +|.|+|++||++|+++++++|+++|+|++.+.+..+.. ..++..|+++++|+++
T Consensus 344 ---------~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~ 413 (417)
T 1izo_A 344 ---------ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSL-ARMPSLPESGFVMSGI 413 (417)
T ss_dssp ---------CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCS-SSSSCCCTTCCEEEEE
T ss_pred ---------CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCccc-ccCCCCCCCCceEeee
Confidence 023689999999 59999999999999999999999999998764333322 3456788999999999
Q ss_pred ecCC
Q 038386 520 PRVN 523 (523)
Q Consensus 520 ~r~~ 523 (523)
+|++
T Consensus 414 ~r~~ 417 (417)
T 1izo_A 414 RRKS 417 (417)
T ss_dssp EEC-
T ss_pred eCCC
Confidence 9985
No 28
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=5e-63 Score=481.58 Aligned_cols=376 Identities=17% Similarity=0.170 Sum_probs=298.6
Q ss_pred CCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC-CEeEEEecCHHHHHHHHHhCC-cccccCCCCCccc
Q 038386 38 LPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG-SEPSIYICNNTLAHQALINNG-TVFADRPKSTSIA 115 (523)
Q Consensus 38 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-~~~~v~v~~p~~i~~i~~~~~-~~~~~~~~~~~~~ 115 (523)
.||||+++|++|+++. +++..+.+|+ +||+|++++++ +.+.++|++++.+++++.++. ..+..++......
T Consensus 2 ~pPGp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~ 74 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS 74 (404)
T ss_dssp ----CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred CCCCCCCCCCCCCcCC------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence 4999999999999764 6788899996 59999998874 556678999999999997652 2233333322111
Q ss_pred ccce-eeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH
Q 038386 116 DDLI-FANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY 194 (523)
Q Consensus 116 ~~~~-~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~ 194 (523)
.... ...+..++++ .+|+.|+++|+++. ++|++..++ .+.+.+.+.++++++.+.+... +++++|+...+..
T Consensus 75 ~~~~~~~~~~~~l~~-~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~~~--~~~~~d~~~~~~~ 147 (404)
T 1jfb_A 75 ASGKQAAKAKPTFVD-MDPPEHMHQRSMVE---PTFTPEAVK-NLQPYIQRTVDDLLEQMKQKGC--ANGPVDLVKEFAL 147 (404)
T ss_dssp HHHHHHTTSCCCGGG-CCTTHHHHHHTTTG---GGGSHHHHH-HHHHHHHHHHHHHHHHHHHHCS--TTSCEEHHHHTTT
T ss_pred ccccchhcccCcccc-cCchhHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHhcCC--CCCCccHHHHHHH
Confidence 0000 0111224444 48999999999999 999999999 9999999999999999987533 3568999999999
Q ss_pred HHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHH
Q 038386 195 AIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIK 274 (523)
Q Consensus 195 ~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 274 (523)
.+.++++..+||.++++.. .+..... .. ..+.. ..++..+..+.+.+++.++|+++++.
T Consensus 148 ~~~~~i~~~~~G~~~~~~~--~~~~~~~----~~--------~~~~~------~~~~~~~~~~~~~~~~~~~i~~r~~~- 206 (404)
T 1jfb_A 148 PVPSYIIYTLLGVPFNDLE--YLTQQNA----IR--------TNGSS------TAREASAANQELLDYLAILVEQRLVE- 206 (404)
T ss_dssp HHHHHHHHHHHTCCGGGHH--HHHHHHH----HH--------HCTTS------CHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHcCCCHHHHH--HHHHHHH----HH--------hccCc------chHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9999999999999875321 1111111 00 01110 12345566777888888888887653
Q ss_pred hhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhc
Q 038386 275 QENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQ 354 (523)
Q Consensus 275 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~ 354 (523)
...|+++.|++... +++.++++++++++..+++||+|||+++++|++++|++||++|++|+++
T Consensus 207 --------~~~d~l~~ll~~~~--~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~------- 269 (404)
T 1jfb_A 207 --------PKDDIISKLCTEQV--KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------- 269 (404)
T ss_dssp --------CCSSHHHHHHHHTT--TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-------
T ss_pred --------CCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-------
Confidence 34689999997542 3456999999999999999999999999999999999999999999982
Q ss_pred CCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCc
Q 038386 355 GQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPER 434 (523)
Q Consensus 355 ~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R 434 (523)
.+||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|||
T Consensus 270 ------------~~yl~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR 336 (404)
T 1jfb_A 270 ------------PSLAPQFVEELCRYHTASALA-IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 336 (404)
T ss_dssp ------------GGGHHHHHHHHHHHSCSCCSC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC
T ss_pred ------------hHhHHHHHHHHHhhCCCcccc-ceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCC
Confidence 369999999999999999955 5999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecC
Q 038386 435 FLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKAD 495 (523)
Q Consensus 435 fl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~ 495 (523)
|++. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus 337 f~~~-----------------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~ 381 (404)
T 1jfb_A 337 KWPP-----------------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAV 381 (404)
T ss_dssp CCCS-----------------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred CCCC-----------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecC
Confidence 9854 2499999999999999999999999999999999 799875
No 29
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=1.7e-64 Score=504.14 Aligned_cols=445 Identities=15% Similarity=0.164 Sum_probs=306.7
Q ss_pred CCCCCCCCCCCc-cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC
Q 038386 33 ISTQNLPPGPPR-FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS 111 (523)
Q Consensus 33 ~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~ 111 (523)
....+.||||++ +|++||++++ ..+++.++.+++++||+||++++|+.++++|+||+.+++++.++. .++.++..
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~---~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~ 89 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEF---GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYA 89 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHH---HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHH---hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHH
Confidence 344578999998 9999999988 346899999999999999999999999999999999999996543 23332211
Q ss_pred C-cccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhH
Q 038386 112 T-SIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCE 190 (523)
Q Consensus 112 ~-~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~ 190 (523)
. .+. .+++. +++. .+|+.| |+++. ++|+...++ .+.+.+.+.+.++++.+........+..+++..
T Consensus 90 ~~~~~--~~~g~---~~~~-~~~~~~---R~~~~---~~f~~~~l~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 156 (475)
T 3b98_A 90 QVLMK--RIFNM---ILPS-HNPESE---KKRAE---MHFQGASLT-QLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFN 156 (475)
T ss_dssp HHHHH--HTTCC---CCTT-CCHHHH---HHHHH---HHTSHHHHH-HHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHH
T ss_pred HHHHH--HHhCC---CCCC-CChHHH---HHHHH---HHcChhhHH-HHHHHHHHHHHHHHhhcccccCCCCceeehHHH
Confidence 1 111 22221 3333 255554 56777 789988888 888888888888877654321001234678889
Q ss_pred HHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchh-hhHHHHHHHHHhHHhHHHHHHHHHHH
Q 038386 191 HFRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKI-LFRKRWKKFLGIIRSREDVFVGLVRD 269 (523)
Q Consensus 191 ~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 269 (523)
.+..+++++++...||.+.+. .+.+......+... ...+|++... +....++...+..+.+. +.+.+
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~------~~~~p~l~~~~~~~~~~~~~~~~~~~~~----~~~~~ 224 (475)
T 3b98_A 157 LCYSLLFKTGYLTVFGAENNN--SAALTQIYEEFRRF------DKLLPKLARTTVNKEEKQIASAAREKLW----KWLTP 224 (475)
T ss_dssp HHHHHHHHHHHHHHHCCTTSC--HHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHHHHHHHHHHHHH----HHHSC
T ss_pred HHHHHHHHHhhhheeCCcccc--chhcHHHHHHHHHH------HhhhHHHHHHhcChhhhHHHHHHHHHHH----HHHHH
Confidence 999999999999899965321 22222222222211 1223322111 11111222222222222 11111
Q ss_pred HHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHH
Q 038386 270 RKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEIN 349 (523)
Q Consensus 270 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~ 349 (523)
. . .+......|+++.+++... +++.++++++. +++.+++||+|||+++++|++++|++||++|++||+|++
T Consensus 225 ~---~---~~~~~~~~d~l~~ll~~~~--~~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~ 295 (475)
T 3b98_A 225 S---G---LDRKPREQSWLGSYVKQLQ--DEGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ 295 (475)
T ss_dssp T---T---SCCCCCTTSHHHHHHHHHH--HTTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC
T ss_pred H---H---hhccccccHHHHHHHHHHH--HcCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh
Confidence 1 0 0111245789999997653 23357888888 999999999999999999999999999999999999998
Q ss_pred HhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee-----CCEEeCCCCEEeecccc-ccCCCCC
Q 038386 350 GVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL-----GGYLVTKGISVNFLVAD-MGRDPNV 423 (523)
Q Consensus 350 ~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~-----~g~~ip~G~~v~~~~~~-~~~d~~~ 423 (523)
.+. ..++.+++++||||+|||+|+||++|+ +. ++|.+.+|+++ +||.||||+.|.++.++ +||||++
T Consensus 296 --~~~--~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~--~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~ 368 (475)
T 3b98_A 296 --GGK--HLRLEERQKNTPVFDSVLWETLRLTAA-AL--ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQI 368 (475)
T ss_dssp ----------------CCHHHHHHHHHHHHHHEE-EC--EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTT
T ss_pred --cCC--CCCCHHHHhcCHHHHHHHHHHHhcCCc-cc--eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhh
Confidence 222 356899999999999999999999986 54 49999999999 88999999999999999 9999999
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCC---CCc
Q 038386 424 WEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADED---VDL 500 (523)
Q Consensus 424 ~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~---~~~ 500 (523)
|+||++||||||++.+........ ......+..|+|||+|+|.|+|++||++|+++++++||++|+|++.++. ++.
T Consensus 369 ~~dP~~F~PeRfl~~~~~~~~~~~-~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~ 447 (475)
T 3b98_A 369 HQQPEMFQFDRFLNADRTEKKDFF-KNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLV 447 (475)
T ss_dssp SSSTTSCCTTTTBCTTSCBCCCCB-SSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCB
T ss_pred cCCcccCCcchhcCCCCCcccccc-ccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCC
Confidence 999999999999975321100000 0001124679999999999999999999999999999999999987631 222
Q ss_pred cc-ccc-eEEeecCceeEEEeecCC
Q 038386 501 SE-KAE-FTIEMKNPLHARISPRVN 523 (523)
Q Consensus 501 ~~-~~~-~~~~~~~~~~~~~~~r~~ 523 (523)
.. ..+ .+..|+.+++|++++|++
T Consensus 448 ~~~~~~~~~~~p~~~~~~~~~~R~~ 472 (475)
T 3b98_A 448 DPSRYGFGILQPAGDLEIRYRIRFH 472 (475)
T ss_dssp CGGGTBEEECCBSSCCEEEEEEC--
T ss_pred CcccccccccCCCCCceEEEEeccc
Confidence 21 123 355677899999999964
No 30
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=1.3e-62 Score=477.68 Aligned_cols=387 Identities=17% Similarity=0.134 Sum_probs=309.7
Q ss_pred CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEE----e-CC-EeEEEecCHHHHHHHHHhCCcccccCC
Q 038386 36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVR----M-GS-EPSIYICNNTLAHQALINNGTVFADRP 109 (523)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~----~-~~-~~~v~v~~p~~i~~i~~~~~~~~~~~~ 109 (523)
.+.||||+++|+. + ..+++.++.+| ++||+||+++ + ++ .++|+|+||+.+++|+.++. .|++++
T Consensus 9 ~~lppgp~~~p~~-----~---~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~~~~~~ 78 (406)
T 1ued_A 9 APLLREPANFQLR-----T---NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-HFTTRP 78 (406)
T ss_dssp CCEEECCTTTTCE-----E---TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-SEECCC
T ss_pred CCCcccCcccCCC-----C---CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-cccccc
Confidence 5679999999876 3 34788999999 9999999999 7 78 88999999999999993332 356555
Q ss_pred CCCcccccceeec---cccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCee
Q 038386 110 KSTSIADDLIFAN---KRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGV 186 (523)
Q Consensus 110 ~~~~~~~~~~~~~---~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v 186 (523)
... +.. ..+.. ...++++ .+|+.|+++|+++. +.|++..++ .+.+.+.++++++++.+.. +++++
T Consensus 79 ~~~-~~~-~~~~~~~~~~~~l~~-~~g~~~~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~g~~~ 146 (406)
T 1ued_A 79 QFT-QSK-SGAHVEAQFVGQIST-YDPPEHTRLRKMLT---PEFTVRRIR-RMEPAIQSLIDDRLDLLEA-----EGPSA 146 (406)
T ss_dssp CC-----------CGGGTTCGGG-CCTTHHHHHHHHHG---GGSSHHHHH-HHHHHHHHHHHHHHHHHHH-----HCTTE
T ss_pred ccc-ccc-ccccccccccccccc-CCCHHHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCe
Confidence 421 100 01110 1224544 48999999999999 999999999 9999999999999999974 26689
Q ss_pred ehhHHHHH-HHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHH
Q 038386 187 YVCEHFRY-AIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVG 265 (523)
Q Consensus 187 d~~~~~~~-~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (523)
|+.+++.. +++++++ .+||.+.++ .+.+......+... .. ..++..+..+.+.+++.+
T Consensus 147 d~~~~~~~~~~~~vi~-~~~G~~~~~--~~~~~~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~~~ 205 (406)
T 1ued_A 147 DLQGLFADPVGAHALC-ELLGIPRDD--QREFVRRIRRNADL-----------SR-------GLKARAADSAAFNRYLDN 205 (406)
T ss_dssp EHHHHTHHHHHHHHHH-HHHTCCHHH--HHHHHHHHHHCC--------------C-------CHHHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHhHHHHHH-HHcCCCHHH--HHHHHHHHHHHHhc-----------cC-------CHHHHHHHHHHHHHHHHH
Confidence 99998865 9999999 579987532 22232222211110 00 013455677788888888
Q ss_pred HHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHH
Q 038386 266 LVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKIL 345 (523)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 345 (523)
+|+++++. ...|+++.|++.. +..++++++++++..+++||+|||+.+++|++++|++||++|++++
T Consensus 206 ~i~~r~~~---------~~~d~l~~ll~~~----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~ 272 (406)
T 1ued_A 206 LLARQRAD---------PDDGLLGMIVRDH----GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLF 272 (406)
T ss_dssp HHHHHHHS---------CCSSHHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHH
T ss_pred HHHHHHhC---------CCCCHHHHHHHhc----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 88887653 3468999999864 3458999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCC
Q 038386 346 DEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWE 425 (523)
Q Consensus 346 ~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 425 (523)
+|+. ||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+
T Consensus 273 ~e~~-------------------~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~ 332 (406)
T 1ued_A 273 ESPE-------------------KAERVVNELVRYLSPVQAP-NPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTP 332 (406)
T ss_dssp HCHH-------------------HHHHHHHHHHHHHCSSCSC-SCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSS
T ss_pred hCHH-------------------HHHHHHHHHHhcCCCcccC-cceecCCCEEECCEEECCCCEEEecHHHhcCCchhCC
Confidence 9864 6999999999999999975 5999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCccccc
Q 038386 426 DPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKA 504 (523)
Q Consensus 426 ~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~ 504 (523)
||++|+||||- ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....
T Consensus 333 dp~~F~PeR~~-------------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~ 393 (406)
T 1ued_A 333 DPDVLDANRAA-------------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRS 393 (406)
T ss_dssp STTSCCTTSCC-------------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCC
T ss_pred ChhhcCCCCCC-------------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccc
Confidence 99999999971 3589999999999999999999999999999999 799875322333444
Q ss_pred ceEEeecCceeEEE
Q 038386 505 EFTIEMKNPLHARI 518 (523)
Q Consensus 505 ~~~~~~~~~~~~~~ 518 (523)
+.+.++ .+++|++
T Consensus 394 ~~~~~~-~~lpv~~ 406 (406)
T 1ued_A 394 AFVDCP-DQVPVTW 406 (406)
T ss_dssp SSSCCB-SCCEEEC
T ss_pred cccccC-CeeeeeC
Confidence 556677 8888864
No 31
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=2.4e-64 Score=487.70 Aligned_cols=385 Identities=18% Similarity=0.218 Sum_probs=304.6
Q ss_pred CCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCC-CCCcccccc
Q 038386 40 PGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRP-KSTSIADDL 118 (523)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~~~~~~~ 118 (523)
++++.+|++||++++. .+++.++.+++++||+|++ ++|+.++++|+||+.+++|+.++ .|++++ ...... .
T Consensus 2 ~~~~~~p~iGnl~~~~---~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~--~ 73 (389)
T 1n97_A 2 KRLSLREAWPYLKDLQ---QDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALS--R 73 (389)
T ss_dssp EECCHHHHHHHHHHHH---HCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHH--H
T ss_pred cccccccccccHHHHh---hChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHH--H
Confidence 4567789999999883 4688999999999999998 89999999999999999999765 777765 221111 2
Q ss_pred eeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHH
Q 038386 119 IFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFY 198 (523)
Q Consensus 119 ~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~ 198 (523)
+++ .++++. +|+.|+++|+++. ++|++..++ .+.+.+.+.++++++.+. ++++|+.+++..++++
T Consensus 74 ~~g---~~l~~~-~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~-------~~~~dl~~~~~~~~~~ 138 (389)
T 1n97_A 74 LTG---RGLLTD-WGESWKEARKALK---DPFLPKNVR-GYREAMEEEARAFFGEWR-------GEERDLDHEMLALSLR 138 (389)
T ss_dssp HHC---SSTTTC-CHHHHHHHHHHHC---GGGSHHHHH-TTHHHHHHHHHHHHHTCC-------SCCEEHHHHHHHHHHH
T ss_pred HhC---CccccC-CcHHHHHHHHHhC---cccCHHHHH-HHHHHHHHHHHHHHHHcc-------CCcCcHHHHHHHHHHH
Confidence 222 345444 8999999999999 999999999 999999999999998875 3579999999999999
Q ss_pred HhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhh
Q 038386 199 LLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENE 278 (523)
Q Consensus 199 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 278 (523)
+++.++||.++++ .+......+..... .. .++.+ .+++...+++..++.+.+.+++.++|+++
T Consensus 139 vi~~~~fG~~~~~----~~~~~~~~~~~~~~-~~---~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r-------- 201 (389)
T 1n97_A 139 LLGRALFGKPLSP----SLAEHALKALDRIM-AQ---TRSPL-ALLDLAAEARFRKDRGALYREAEALIVHP-------- 201 (389)
T ss_dssp HHHHHHHSSCCCH----HHHHHHHHHHHHHH-HH---HHCGG-GGGCHHHHHHHHHHHHHHHHHHGGGTTST--------
T ss_pred HHHHHHcCCcchH----HHHHHHHHHHHHHH-HH---HhhHH-HhcCCchhHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999873 34343333333221 11 11212 21222223333344444444433332211
Q ss_pred hccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcc
Q 038386 279 ERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQW 358 (523)
Q Consensus 279 ~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~ 358 (523)
++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.
T Consensus 202 ------------ll--------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------ 255 (389)
T 1n97_A 202 ------------PL--------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------ 255 (389)
T ss_dssp ------------TG--------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------
T ss_pred ------------hc--------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------
Confidence 11 2379999999999999999999999999999999999999999999998753
Q ss_pred cCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCccccc
Q 038386 359 INEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYC 438 (523)
Q Consensus 359 ~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~ 438 (523)
|||+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||| +|+||++|+||||++.
T Consensus 256 -------------a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~ 318 (389)
T 1n97_A 256 -------------AAFQEALRLYPPAWIL--TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEE 318 (389)
T ss_dssp -------------HHHHHHHHHSCSSCCE--EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHS
T ss_pred -------------HHHHHHHhcCCCcccc--ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCC
Confidence 9999999999999976 9999999999999999999999999999999 9999999999999964
Q ss_pred CCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCceeEEE
Q 038386 439 DDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
+ . ..+..|+|||.|+|.|+|++||++|++++++.|+++|++++.++.. . ..+++..|+++++|++
T Consensus 319 ~----~--------~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~p~~~~~v~~ 383 (389)
T 1n97_A 319 R----G--------TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR-V--LAQVTLRPEGGLPARP 383 (389)
T ss_dssp C----C--------CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC-E--EESSSEEETTCCEECC
T ss_pred C----C--------CCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc-c--cceEEeeeCCCceEEE
Confidence 1 0 1236799999999999999999999999999999999999876322 2 3466788888999999
Q ss_pred eecC
Q 038386 519 SPRV 522 (523)
Q Consensus 519 ~~r~ 522 (523)
++|.
T Consensus 384 ~~~~ 387 (389)
T 1n97_A 384 REEV 387 (389)
T ss_dssp BC--
T ss_pred eecc
Confidence 9874
No 32
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=1.5e-62 Score=479.97 Aligned_cols=405 Identities=15% Similarity=0.161 Sum_probs=318.8
Q ss_pred CCCCCccceeeecccccCCCCCccHHHHHHHhhc-CCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccccc
Q 038386 39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKY-GPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADD 117 (523)
Q Consensus 39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~ky-G~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~ 117 (523)
|||| |++||++.+. .+++.++.+++++| |+||++++++.+++++++|+.++ ++. +...|++++........
T Consensus 4 pPg~---P~iG~~~~~~---~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~-~~~~f~~~~~~~~~~~~ 75 (415)
T 3awm_A 4 TPHT---KGPDETLSLL---ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFY-DTTRFEREGAMPVAIQK 75 (415)
T ss_dssp --------CCCCHHHHH---HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHT-CTTTEECTTCSCHHHHT
T ss_pred CCCC---CccchHHHHH---hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHh-cccccccccccchhhhh
Confidence 6776 8999999884 47899999999999 79999999888999999999997 663 33567665432210000
Q ss_pred ceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHH
Q 038386 118 LIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIF 197 (523)
Q Consensus 118 ~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~ 197 (523)
.+++. .+++ ..+|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.|.. ++++|+.+++..+++
T Consensus 76 ~~~g~--~~l~-~~dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~~~~------~~~vdl~~~~~~~~~ 142 (415)
T 3awm_A 76 TLLGQ--GGVQ-GLDGETHRHRKQMFM---GLMTPERVR-ALAQLFEAEWRRAVPGWTR------KGEIVFYDELHEPLT 142 (415)
T ss_dssp TTSCS--SSGG-GCCHHHHHHHHHHHH---TTCCHHHHH-HHHHHHHHHHHHHHHHHHH------HSEEEHHHHHHHHHH
T ss_pred hccCC--ccee-ecCcHHHHHHHHHHH---HhcCHHHHH-HHHHHHHHHHHHHHHhhcc------CCcEeHHHHHHHHHH
Confidence 22331 2444 458999999999999 999999999 9999999999999999865 457999999999999
Q ss_pred HHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhh
Q 038386 198 YLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQEN 277 (523)
Q Consensus 198 ~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 277 (523)
++++.+ ||.++++.....+......+.. .++.+. ..+.+..++.+.+.+++.++|+++++....
T Consensus 143 ~vi~~~-~G~~~~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~- 206 (415)
T 3awm_A 143 RAVCAW-AGVPLPDDEAGNRAGELRALFD---------AAGSAS-----PRHLWSRLARRRVDAWAKRIIEGIRAGSIG- 206 (415)
T ss_dssp HHHHHH-HTCCCCGGGHHHHHHHHHHHHH---------STTCSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHTSSC-
T ss_pred HHHHHH-cCCCCCcchHHHHHHHHHHHHH---------HhcccC-----chHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Confidence 999998 8998865433333222222111 111111 123445677788889999999988764211
Q ss_pred hhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCc
Q 038386 278 EERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQ 357 (523)
Q Consensus 278 ~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~ 357 (523)
....|+++.|+....+ ++..++++++..++..++ ||++||+.+++|++++|++||++|++|++|
T Consensus 207 ----~~~~d~l~~ll~~~~~-~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------- 270 (415)
T 3awm_A 207 ----SGSGTAAYAIAWHRDR-HDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------- 270 (415)
T ss_dssp ----CCTTSHHHHHHHCBCT-TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC----------
T ss_pred ----CCCCCHHHHHHhhhhc-cCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH----------
Confidence 1346899999987532 344688888888777655 999999999999999999999999999986
Q ss_pred ccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccc
Q 038386 358 WINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLY 437 (523)
Q Consensus 358 ~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~ 437 (523)
+|||+|||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||++
T Consensus 271 ---------~~~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~ 339 (415)
T 3awm_A 271 ---------PDYAELFVQEVRRFYPFFPAV--VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRA 339 (415)
T ss_dssp ---------TTHHHHHHHHHHHHSCCSCEE--EEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGG
T ss_pred ---------HHHHHHHHHHHhhcCCCcccc--ceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCC
Confidence 589999999999999999976 899999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCCCccccccCcccccccCCC----CCCCcchHHHHHHHHHHHHHHhhhcEeEecCCCCCcccccceEEeecCc
Q 038386 438 CDDKNGGKNNLDITRNREIKMMPFGAG----RRVCPGLGLAILNLEYFVANLIWKFEWNKADEDVDLSEKAEFTIEMKNP 513 (523)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 513 (523)
.+. .+..|+|||+| +|.|+|++||++|++++++.|+++|++++.+.+..+. ...++..|+++
T Consensus 340 ~~~-------------~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~p~~~ 405 (415)
T 3awm_A 340 WDE-------------DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSID-FARLPALPKSG 405 (415)
T ss_dssp CCC-------------CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBC-TTSSSCCBTTC
T ss_pred CCC-------------CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcC-cCCCccccCCC
Confidence 520 23679999999 5999999999999999999999999999876433333 23466788999
Q ss_pred eeEEEeec
Q 038386 514 LHARISPR 521 (523)
Q Consensus 514 ~~~~~~~r 521 (523)
+++++++.
T Consensus 406 ~~~~~~~~ 413 (415)
T 3awm_A 406 FVMRNVHI 413 (415)
T ss_dssp CEEEEEES
T ss_pred ceEEEEeC
Confidence 99999864
No 33
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=1.7e-62 Score=480.77 Aligned_cols=409 Identities=16% Similarity=0.201 Sum_probs=313.0
Q ss_pred CCCCCCCCccceeeecccccC-CC-CCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCCC
Q 038386 36 QNLPPGPPRFHLLAHLLWHRK-PL-FQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKST 112 (523)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~-~~-~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~ 112 (523)
.++||| ++|++..... .. .+++..+.++++ ||+|+++++ |+.++|+|++++.+++++.+ .+.|++++...
T Consensus 5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~-~~~fs~r~~~~ 77 (428)
T 1cpt_A 5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQ-PGLFSNAEGSE 77 (428)
T ss_dssp CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHC-TTTEESSSSCS
T ss_pred cccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcC-chhccCccccc
Confidence 466888 8887654411 11 357888999877 799999998 67889999999999999954 45788876511
Q ss_pred ccc-c-c-c-e---eec---cccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcC
Q 038386 113 SIA-D-D-L-I---FAN---KRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECR 182 (523)
Q Consensus 113 ~~~-~-~-~-~---~~~---~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~ 182 (523)
.+. . . . + +|. ...++++ .+|+.|+++|++++ ++|++..++ .+.+.+++.++++++.+.+ .
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~g~~~~~~Rr~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~ 147 (428)
T 1cpt_A 78 ILYDQNNEAFMRSISGGCPHVIDSLTS-MDPPTHTAYRGLTL---NWFQPASIR-KLEENIRRIAQASVQRLLD-----F 147 (428)
T ss_dssp SCCCHHHHHHHHHHTTTSSCSSCCGGG-CCTTHHHHHHHHHH---TTSSHHHHG-GGHHHHHHHHHHHHHHHHT-----S
T ss_pred cCCcccccchhcccccccccccccccc-CChHHHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHHHH-----h
Confidence 111 0 0 1 2 221 1234544 48999999999999 999999999 9999999999999999875 2
Q ss_pred CCeeehhHH-HHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHH
Q 038386 183 GDGVYVCEH-FRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSRED 261 (523)
Q Consensus 183 ~~~vd~~~~-~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~ 261 (523)
++.+|+... ...+++++++.+ ||.+.++. +.+......+..... .....+|++... ....+++..+..+.+.+
T Consensus 148 ~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--~~~~~~~~~~~~~~~--~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~ 221 (428)
T 1cpt_A 148 DGECDFMTDCALYYPLHVVMTA-LGVPEDDE--PLMLKLTQDFFGVHE--PDEQAVAAPRQS-ADEAARRFHETIATFYD 221 (428)
T ss_dssp SSEEEHHHHTTTTHHHHHHHHH-HTCCGGGH--HHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHH
T ss_pred CCCeehHHHHHhhhHHHHHHHH-cCCCHhHH--HHHHHHHHHHHhccc--cccccccccccc-chhhHHHHHHHHHHHHH
Confidence 368999855 567999999999 99987532 233333322221111 111234444321 11122456667778888
Q ss_pred HHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHH
Q 038386 262 VFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQ 341 (523)
Q Consensus 262 ~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~ 341 (523)
++.++|+++++. ...|+++.|++... ++..+++++++.++..+++||+|||+++++|++++|++||++|
T Consensus 222 ~~~~~i~~r~~~---------~~~dll~~ll~~~~--~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~ 290 (428)
T 1cpt_A 222 YFNGFTVDRRSC---------PKDDVMSLLANSKL--DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQL 290 (428)
T ss_dssp HHHHHHHHHTTS---------CCSSHHHHHHHCBS--SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHcC---------CCCcHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 888888877642 34689999998753 3456999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCC
Q 038386 342 AKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDP 421 (523)
Q Consensus 342 ~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~ 421 (523)
+++++|++ ||+|||+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||
T Consensus 291 ~~l~~E~~-------------------~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp 349 (428)
T 1cpt_A 291 ALAKSDPA-------------------LIPRLVDEAVRWTAPVKSF--MRTALADTEVRGQNIKRGDRIMLSYPSANRDE 349 (428)
T ss_dssp HHHHHCGG-------------------GHHHHHHHHHHHHCCBCCC--EEEESSCEEETTEEECTTCEEEECHHHHTTCT
T ss_pred HHHHHhHH-------------------HHHHHHHHHHHhCCccccc--ceeeCCCeeECCEEECCCCEEEeCHHHhCCCh
Confidence 99999863 8999999999999999854 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCc
Q 038386 422 NVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDL 500 (523)
Q Consensus 422 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~ 500 (523)
++|+||++|+||||.+ .++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ +..+
T Consensus 350 ~~~~dP~~F~PeR~~~-------------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~ 409 (428)
T 1cpt_A 350 EVFSNPDEFDITRFPN-------------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-PPRL 409 (428)
T ss_dssp TTCSSTTSCCTTCCSC-------------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-CCEE
T ss_pred hhCCChhhcCCCCCCC-------------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-Cccc
Confidence 9999999999999841 2899999999999999999999999999999997 88774 2222
Q ss_pred ccccceEEeecCceeEEEeec
Q 038386 501 SEKAEFTIEMKNPLHARISPR 521 (523)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~r 521 (523)
..+.....+.+++|++++|
T Consensus 410 --~~~~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 410 --VATNFVGGPKNVPIRFTKA 428 (428)
T ss_dssp --CCCSSBCSEEECEEEEEEC
T ss_pred --ccCccccCcceeeEEeeCC
Confidence 2233456667899999876
No 34
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=6.2e-61 Score=466.91 Aligned_cols=394 Identities=17% Similarity=0.166 Sum_probs=310.3
Q ss_pred CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhc-CCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKY-GPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~ky-G~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
.+.||+|+++|.+.....+ ..+++..+.+| ++| |+||++++ ++.++|+|+||+.+++|+.++ .|++++....
T Consensus 4 ~~~~~~~~~~P~~~~~~~~---~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~ 77 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSC---PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDN 77 (412)
T ss_dssp ----CCCCSSCBSSCCCSS---TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTT
T ss_pred CCCCCCCCCCCCCCCCchh---ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccc
Confidence 3558888888866322233 45789999999 778 99999998 888999999999999999643 3555543111
Q ss_pred ccccce------eeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeee
Q 038386 114 IADDLI------FANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVY 187 (523)
Q Consensus 114 ~~~~~~------~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd 187 (523)
+. .+ +.....++++ .+|+.|+++|+++. +.|++..++ .+.+.+.+.+.++++.+.. +++++|
T Consensus 78 ~~--~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~g~~~d 145 (412)
T 2zbx_A 78 FP--ATSPRFEAVRESPQAFIG-LDPPEHGTRRRMTI---SEFTVKRIK-GMRPEVEEVVHGFLDEMLA-----AGPTAD 145 (412)
T ss_dssp SC--CCSGGGC----CCCCGGG-CCTTHHHHHHTTTG---GGGSHHHHH-HHHHHHHHHHHHHHHHHHH-----HCSCEE
T ss_pred cc--cccccccccccccccccc-CCcHHHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCcc
Confidence 11 11 0001224544 48999999999999 999999999 9999999999999999974 267899
Q ss_pred hhHHHH-HHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHH
Q 038386 188 VCEHFR-YAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGL 266 (523)
Q Consensus 188 ~~~~~~-~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (523)
+.+.+. .+++++++. +||.+.++ .+.+......++. .. .. ++..+..+.+.+++.++
T Consensus 146 ~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~~~~---------~~-------~~---~~~~~~~~~~~~~~~~~ 203 (412)
T 2zbx_A 146 LVSQFALPVPSMVICR-LLGVPYAD--HEFFQDASKRLVQ---------ST-------DA---QSALTARNDLAGYLDGL 203 (412)
T ss_dssp HHHHTTTHHHHHHHHH-HHTCCGGG--HHHHHHHHHHHHH---------CS-------SH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHhc---------cC-------cH---HHHHHHHHHHHHHHHHH
Confidence 998886 488999996 79988743 2233333222211 00 01 44556777788888888
Q ss_pred HHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHH
Q 038386 267 VRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILD 346 (523)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 346 (523)
|+++++. ...|+++.|++... ++..++++++++++..+++||+|||+.+++|++++|++||++|++|++
T Consensus 204 i~~r~~~---------~~~d~l~~ll~~~~--~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~ 272 (412)
T 2zbx_A 204 ITQFQTE---------PGAGLVGALVADQL--ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA 272 (412)
T ss_dssp HHHHHHS---------CCSSHHHHHHHTTT--TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHhC---------CCCCHHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHh
Confidence 8887653 34689999998753 345699999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCC
Q 038386 347 EINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWED 426 (523)
Q Consensus 347 Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 426 (523)
|+. ||+|||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||||++|+|
T Consensus 273 e~~-------------------~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~d 332 (412)
T 2zbx_A 273 DRS-------------------LVPGAVEELLRYLAIADIA-GGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYED 332 (412)
T ss_dssp CGG-------------------GHHHHHHHHHHHHCCCGGG-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSS
T ss_pred ChH-------------------hHHHHHHHHHHhCCccccc-cceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCC
Confidence 742 7999999999999999965 59999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccc
Q 038386 427 PLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAE 505 (523)
Q Consensus 427 p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~ 505 (523)
|++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+
T Consensus 333 P~~F~PeR~~-------------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~ 393 (412)
T 2zbx_A 333 PDALDIHRSA-------------------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPG 393 (412)
T ss_dssp TTSCCTTSCC-------------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCT
T ss_pred ccccCCCCCC-------------------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccc
Confidence 9999999961 3589999999999999999999999999999999 7998752223333344
Q ss_pred eEEeecCceeEEEe
Q 038386 506 FTIEMKNPLHARIS 519 (523)
Q Consensus 506 ~~~~~~~~~~~~~~ 519 (523)
.+.+....++|+.+
T Consensus 394 ~~~~g~~~lpv~~~ 407 (412)
T 2zbx_A 394 TTIQGVNELPVTWH 407 (412)
T ss_dssp TSCCCBSCCEEECC
T ss_pred cccCCcceeeeecc
Confidence 45667777777754
No 35
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=2.8e-61 Score=467.88 Aligned_cols=379 Identities=16% Similarity=0.152 Sum_probs=306.6
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCC--C-Cccc-ccceeeccccceeeCcC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPK--S-TSIA-DDLIFANKRRGISTYPY 132 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~i~~~~~ 132 (523)
..+++.++.+| ++||+|+++++ |+.++|+|+||+.+++|+.++ .|++++. . .... ..... .+.+++ ..+
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~--~~~~l~-~~~ 91 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKP--GRGSLL-WQD 91 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCC--CTTCCT-TCC
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccc--cccccc-cCC
Confidence 34678899999 89999999998 889999999999999999653 4777642 1 1110 00111 223454 458
Q ss_pred CchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcch
Q 038386 133 GTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEE 211 (523)
Q Consensus 133 g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~ 211 (523)
|+.|+++|++++ +.|++..++ .+.+.+.+.++++++.+.+ . ++++|+...+ ..+++++++. +||.+.++
T Consensus 92 g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~--~---~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 161 (403)
T 3aba_A 92 EPEHTSDRKLLA---KEFTVRRMQ-ALRPNIQRIVDEHLDAIEA--R---GGPVDLVKTFANAVPSMVISD-LFGVPVER 161 (403)
T ss_dssp TTHHHHHHHHHH---HHSCHHHHH-TTHHHHHHHHHHHHHHHHH--H---CSCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred chhHHHHHHHHH---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh--c---CCCccHHHHHHHHHHHHHHHH-HcCCCHHH
Confidence 999999999999 999999999 9999999999999999975 2 5689998766 5789999997 79988743
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHH
Q 038386 212 QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~l 291 (523)
. +.+......+. ..... . ++..+..+.+.+++.++|+++++. ...|+++.|
T Consensus 162 ~--~~~~~~~~~~~------------~~~~~---p---~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll~~l 212 (403)
T 3aba_A 162 R--AEFQDIAEAMM------------RVDQD---A---AATEAAGMRLGGLLYQLVQERRAN---------PGDDLISAL 212 (403)
T ss_dssp H--HHHHHHHHHHS------------BSSSC---H---HHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHH
T ss_pred H--HHHHHHHHHHH------------hccCc---H---HHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHH
Confidence 2 22322222111 10100 1 445567778888889988887653 346899999
Q ss_pred HHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHH
Q 038386 292 IELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLK 371 (523)
Q Consensus 292 l~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~ 371 (523)
++... ++..++++++++++..+++||+|||+++++|++++|++||++|++|++|+ .||+
T Consensus 213 l~~~~--~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~ 271 (403)
T 3aba_A 213 ITTED--PDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP-------------------SLVG 271 (403)
T ss_dssp HTSCC--TTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------GGHH
T ss_pred Hhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------------------HHHH
Confidence 98752 34569999999999999999999999999999999999999999999985 2799
Q ss_pred HHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccc
Q 038386 372 AVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDIT 451 (523)
Q Consensus 372 a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~ 451 (523)
|||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 272 a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~--------------- 335 (403)
T 3aba_A 272 NAVEELLRYLTIGQFG-GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP--------------- 335 (403)
T ss_dssp HHHHHHHHHHCSCTTC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------------
T ss_pred HHHHHHHhcCCCcccc-cceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC---------------
Confidence 9999999999999954 599999999999999999999999999999999999999999999973
Q ss_pred ccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 452 RNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 452 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+..+...++|++++|+
T Consensus 336 ----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 336 ----APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp ----CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred ----CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCCC
Confidence 2489999999999999999999999999999999 699876322333334556788999999999985
No 36
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=4.8e-61 Score=466.82 Aligned_cols=380 Identities=14% Similarity=0.145 Sum_probs=305.1
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC-cc--cccceeeccccceeeCcCCc
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST-SI--ADDLIFANKRRGISTYPYGT 134 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~i~~~~~g~ 134 (523)
..+++.++.+| ++||+||++++++.++++|++|+.+++++.++ .|++++... .. . ..+....+.+++. .+|+
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~-~~~~~~~~~~l~~-~~g~ 93 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQR-ADMPATPTPMMIL-MDPP 93 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGC-TTCCSCSSCCGGG-CCTT
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC--Ccccccccccccccc-cccCccccccccc-CCch
Confidence 45788999999 89999999999999999999999999999654 377765432 10 0 0111112234544 4899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH-HHHHHHHHhhhhhccCCcchhH
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH-FRYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~-~~~~~~~v~~~~~fG~~~~~~~ 213 (523)
.|+++|+++. +.|++..++ .+.+.+.+.+.++++.+.. ++++|+... ...+++++++.+ ||.+.++.
T Consensus 94 ~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~------~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~- 161 (411)
T 3a4g_A 94 DHTRLRKLVG---RSFTVRRMN-ELEPRITEIADGLLAGLPT------DGPVDLMREYAFQIPVQVICEL-LGVPAEDR- 161 (411)
T ss_dssp HHHHHHHHHH---TTCCHHHHH-HHHHHHHHHHHHHHHHSCS------SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGH-
T ss_pred HHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHHHh------cCCccHHHHHHHHhHHHHHHHH-hCCCHHHH-
Confidence 9999999999 999999999 9999999999999998853 367999754 568999999975 99887532
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
+.+......+.. ..| + ++..+..+.+.+++.++|+++++. ...|+++.|++
T Consensus 162 -~~~~~~~~~~~~---------~~p------~----~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d~l~~ll~ 212 (411)
T 3a4g_A 162 -DDFSAWSSVLVD---------DSP------A----DDKNAAMGKLHGYLSDLLERKRTE---------PDDALLSSLLA 212 (411)
T ss_dssp -HHHHHHHHHHTT---------SSC------T----TTHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHH
T ss_pred -HHHHHHHHHHhc---------cCC------H----HHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHH
Confidence 233322222111 122 0 134456677888888888887653 34689999998
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
...+ ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|+. ||+||
T Consensus 213 ~~~~-~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~ 272 (411)
T 3a4g_A 213 VSDE-DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS-------------------LISSA 272 (411)
T ss_dssp CCCT-TCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------------GHHHH
T ss_pred hhcc-CCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH-------------------HHHHH
Confidence 7531 344699999999999999999999999999999999999999999999852 89999
Q ss_pred HHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccccc
Q 038386 374 ILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRN 453 (523)
Q Consensus 374 i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~ 453 (523)
|+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 273 i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------------- 334 (411)
T 3a4g_A 273 VEEFLRFDSPVSQA-PIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------------- 334 (411)
T ss_dssp HHHHHHHTCSBCBC-CCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC-----------------
T ss_pred HHHHHHhcccccCC-ceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC-----------------
Confidence 99999999999955 599999999999999999999999999999999999999999999973
Q ss_pred CcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecCC
Q 038386 454 REIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 454 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 523 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+..+..+++|++++|++
T Consensus 335 --~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~~ 403 (411)
T 3a4g_A 335 --SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRSA 403 (411)
T ss_dssp --TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCCC
T ss_pred --CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCcch
Confidence 2489999999999999999999999999999999 6998752212222334556788999999999864
No 37
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=7e-61 Score=465.58 Aligned_cols=391 Identities=17% Similarity=0.168 Sum_probs=308.7
Q ss_pred CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEe-CCEe-EEEecCHHHHHHHHHhCCcccccCCCCCc
Q 038386 36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRM-GSEP-SIYICNNTLAHQALINNGTVFADRPKSTS 113 (523)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~-~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 113 (523)
.+.+|+|+.+|+.++ . ..+++.++.+++ +||+|+++++ ++.+ +++|+||+.+++|+.+ ..|.+++....
T Consensus 7 ~~~~~~~~~~p~~~~---~---~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~ 77 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---P---GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDR 77 (406)
T ss_dssp -CCSCCEEECCCCCC---C---TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTT
T ss_pred hhhccCCCCCCCCcc---c---ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCC
Confidence 356888888888776 2 357889999996 7999999996 6666 9999999999999964 46777765421
Q ss_pred cc--ccc-eeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhH
Q 038386 114 IA--DDL-IFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCE 190 (523)
Q Consensus 114 ~~--~~~-~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~ 190 (523)
+. ... ..+ .+.++++. +|+.|+++|+++. +.|++..++ .+.+.+.+.+.++++.+.+ . ++++|+..
T Consensus 78 ~~~~~~~~~~~-~~~~l~~~-dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~--~---~~~~d~~~ 146 (406)
T 1s1f_A 78 QVTRLAPHFIP-ARGAVGFL-DPPDHTRLRRSVA---AAFTARGVE-RVRERSRGMLDELVDAMLR--A---GPPADLTE 146 (406)
T ss_dssp TBCBSSSSCSS-CTTSGGGC-CTTHHHHHHHHHH---HHHSHHHHH-HHHHHHHHHHHHHHHHHHH--H---CSSEEHHH
T ss_pred Ccccccccccc-cccccccC-CchHHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHHHHh--c---CCCccHHH
Confidence 11 001 111 12355554 8999999999999 999999999 9999999999999999975 1 56899987
Q ss_pred HH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 038386 191 HF-RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRD 269 (523)
Q Consensus 191 ~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 269 (523)
.+ ..+++++++. +||.+.++. +.+......+.... .|. ++..+..+.+.+++.++|++
T Consensus 147 ~~~~~~~~~vi~~-~~G~~~~~~--~~~~~~~~~~~~~~--------~~~----------~~~~~~~~~~~~~~~~~i~~ 205 (406)
T 1s1f_A 147 AVLSPFPIAVICE-LMGVPATDR--HSMHTWTQLILSSS--------HGA----------EVSERAKNEMNAYFSDLIGL 205 (406)
T ss_dssp HTTTHHHHHHHHH-HHTCCGGGH--HHHHHHHHHHHHHH--------TTC----------CCCHHHHTHHHHHHHHHHHT
T ss_pred HHhhHhHHHHHHH-HhCCCHHHH--HHHHHHHHHHHhcc--------CCH----------HHHHHHHHHHHHHHHHHHHH
Confidence 66 5799999998 699887532 23333333322211 110 12234556667777777766
Q ss_pred HHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHH
Q 038386 270 RKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEIN 349 (523)
Q Consensus 270 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~ 349 (523)
+++. ...|+++.|++... +..+++++++.++..+++|| |||+.+++|++++|++||++|+++++|++
T Consensus 206 r~~~---------~~~d~l~~ll~~~~---~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 272 (406)
T 1s1f_A 206 RSDS---------AGEDVTSLLGAAVG---RDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE 272 (406)
T ss_dssp SCCS---------CCCSHHHHHHHHHH---TTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG
T ss_pred HHhC---------CCCCHHHHHHHhhc---ccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 5432 34689999998753 26799999999999999999 99999999999999999999999999853
Q ss_pred HhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCC-CCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCC
Q 038386 350 GVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVY-LLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPL 428 (523)
Q Consensus 350 ~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~ 428 (523)
||+|||+|+||++|+++ .. ++|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus 273 -------------------~l~a~i~E~lRl~p~~~~~~-~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 332 (406)
T 1s1f_A 273 -------------------IRPRAIDELLRWIPHRNAVG-LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD 332 (406)
T ss_dssp -------------------GHHHHHHHHHHHSCCBSSCC-CCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred -------------------HHHHHHHHHHhhCCCccccC-cceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcc
Confidence 79999999999999999 34 5999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceE
Q 038386 429 EFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFT 507 (523)
Q Consensus 429 ~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~ 507 (523)
+|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+
T Consensus 333 ~F~PeR~~-------------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~ 393 (406)
T 1s1f_A 333 RIDFERSP-------------------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGAL 393 (406)
T ss_dssp SCCTTC---------------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCS
T ss_pred eeCCCCCC-------------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcc
Confidence 99999985 2389999999999999999999999999999999 799986322333334455
Q ss_pred EeecCceeEEEe
Q 038386 508 IEMKNPLHARIS 519 (523)
Q Consensus 508 ~~~~~~~~~~~~ 519 (523)
..+...++|+++
T Consensus 394 ~~~~~~lpv~~~ 405 (406)
T 1s1f_A 394 IRGPEALPVTWH 405 (406)
T ss_dssp BCCBSCCEEECC
T ss_pred cCCcceeEEeeC
Confidence 678888888864
No 38
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=3.4e-61 Score=468.90 Aligned_cols=395 Identities=17% Similarity=0.204 Sum_probs=309.5
Q ss_pred ccCcCCCCCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccC
Q 038386 29 SSSEISTQNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADR 108 (523)
Q Consensus 29 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~ 108 (523)
+++..++++.+|||+. ..+++.++.++++ ||+| ++++.+.++|++|+.+++++.++ +.|+++
T Consensus 11 yr~~~~pl~~~PGp~~-------------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~ 72 (411)
T 2jjn_A 11 ARRTLTTIDEVPGMAD-------------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSD 72 (411)
T ss_dssp ------CCCSCCCSSC-------------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESC
T ss_pred hhcccCCCCCCCCccc-------------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCc
Confidence 3355566777899882 1357788899976 9998 67777789999999999999654 468777
Q ss_pred CCCCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeeh
Q 038386 109 PKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYV 188 (523)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~ 188 (523)
+... +. .. ...+.++++ .+|+.|+++|++++ ++|++..++ .+.+.+++.++++++. . ++++|+
T Consensus 73 ~~~~-~~--~~-~~~~~~~~~-~~g~~~~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~-----~---~~~~d~ 135 (411)
T 2jjn_A 73 PTRV-IE--GA-SPTPGMIHE-IDPPEHRALRKVVS---SAFTPRTIS-DLEPRIRDVTRSLLAD-----A---GESFDL 135 (411)
T ss_dssp GGGG-ST--TC-CCCTTCGGG-CCTTHHHHHHHHHH---HHSCHHHHH-TTHHHHHHHHHHHHHT-----S---CSEEEH
T ss_pred cccc-CC--cc-ccccccccc-CCchHHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHhc-----C---CCceeH
Confidence 5421 11 11 112234544 48999999999999 999999999 9999999999999987 2 458999
Q ss_pred hHH-HHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHH
Q 038386 189 CEH-FRYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLV 267 (523)
Q Consensus 189 ~~~-~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 267 (523)
... ...+++++++.+ ||.+.++. +.+......+... ..|.+. ....+++..+..+.+.+++.++|
T Consensus 136 ~~~~~~~~~~~vi~~~-fG~~~~~~--~~~~~~~~~~~~~--------~~~~~~---~p~~~~~~~~~~~~~~~~~~~~i 201 (411)
T 2jjn_A 136 VDVLAFPLPVTIVAEL-LGLPPMDH--EQFGDWSGALVDI--------QMDDPT---DPALAERIADVLNPLTAYLKARC 201 (411)
T ss_dssp HHHTTTHHHHHHHHHH-HTCCSCCC--STTCCHHHHHHHS--------CCSCTT---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHH--HHHHHHHHHHHhc--------cCcccc---chHHHHHHHHHHHHHHHHHHHHH
Confidence 855 568999999998 99887432 1222222222211 122211 12334566677888888999999
Q ss_pred HHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHH
Q 038386 268 RDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDE 347 (523)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 347 (523)
+++++. ...|+++.|++... ++..++++++++++..+++||+|||+++++|++++|++||++|+++++|
T Consensus 202 ~~r~~~---------~~~d~l~~ll~~~~--~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E 270 (411)
T 2jjn_A 202 AERRAD---------PGDDLISRLVLAEV--DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED 270 (411)
T ss_dssp HHHHHS---------CCSSHHHHHHHCCB--TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHC
T ss_pred HHHHhC---------CCCCHHHHHHhccc--CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhC
Confidence 887652 34689999998753 3456999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCC
Q 038386 348 INGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDP 427 (523)
Q Consensus 348 i~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 427 (523)
++ ||+|||+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||++|+||
T Consensus 271 ~~-------------------~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP 329 (411)
T 2jjn_A 271 PG-------------------RIPAIVEEVLRYRPPFPQM--QRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 329 (411)
T ss_dssp GG-------------------GHHHHHHHHHHHSCSSCEE--EEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSST
T ss_pred HH-------------------hHHHHHHHHhhhCCCcCCc--ceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCc
Confidence 64 8999999999999999855 99999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCcccccce
Q 038386 428 LEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDLSEKAEF 506 (523)
Q Consensus 428 ~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~ 506 (523)
++|+||||.+. ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ +.++....+.
T Consensus 330 ~~F~PeR~~~~-----------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~ 391 (411)
T 2jjn_A 330 DRFDPSRKSGG-----------------AAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR-DDERLRHFEQ 391 (411)
T ss_dssp TSCCTTCCCSS-----------------CCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECC-SSCCCCBCCS
T ss_pred cccCCCCCCCC-----------------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECC-CCceeccccc
Confidence 99999997421 35899999999999999999999999999999995 99875 3333213345
Q ss_pred EEeecCceeEEEeecC
Q 038386 507 TIEMKNPLHARISPRV 522 (523)
Q Consensus 507 ~~~~~~~~~~~~~~r~ 522 (523)
...++.+++|++++|.
T Consensus 392 ~~~~~~~lpv~~~~~~ 407 (411)
T 2jjn_A 392 IVLGTRHLPVLAGSSP 407 (411)
T ss_dssp SSSSBSCCEEECSCCT
T ss_pred cccCcceeEEEecCCC
Confidence 5677889999988763
No 39
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=2.7e-61 Score=468.80 Aligned_cols=396 Identities=15% Similarity=0.131 Sum_probs=314.0
Q ss_pred cCCCCCCCCCCCcccee--eecccccCC--CCCccHHHHHHHhhcC--CeEEEE-eCCEeEEEecCHHHHHHHHHhCCcc
Q 038386 32 EISTQNLPPGPPRFHLL--AHLLWHRKP--LFQLGPIISTLRLKYG--PIITVR-MGSEPSIYICNNTLAHQALINNGTV 104 (523)
Q Consensus 32 ~~~~~~~ppgp~~~p~~--G~~~~~~~~--~~~~~~~~~~~~~kyG--~i~~~~-~~~~~~v~v~~p~~i~~i~~~~~~~ 104 (523)
+.++.++||||++.|.. +.+-.+... ..+++.++.+|+ +|| +||+++ +| +.++|+|++.+++|+. +.+.
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~-~~~~ 81 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYE-DYRH 81 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHH-CTTT
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHc-Cccc
Confidence 34556899999998864 443111111 457889999996 799 999888 55 5899999999999995 4557
Q ss_pred cccCCCCCcccccceeeccccc-eeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCC
Q 038386 105 FADRPKSTSIADDLIFANKRRG-ISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRG 183 (523)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 183 (523)
|++++...... . ...+.+ +++ .+|+.|+++|+++. +.|++..++ .+.+.+.+.++++++.+.. .
T Consensus 82 f~~~~~~~~~~--~--~~~~~~~l~~-~~g~~~~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~------~ 146 (415)
T 2zwu_A 82 FSSECPFIPRE--A--GEAYDFIPTS-MDPPEQRQFRALAN---QVVGMPVVD-KLENRIQELACSLIESLRP------Q 146 (415)
T ss_dssp EETTSCSSSHH--H--HHHCCCTTTT-CCTTTTHHHHHHHH---HHHSHHHHH-HHHHHHHHHHHHHHHHHGG------G
T ss_pred cCCCcccCCCC--c--cccccccCcc-CCCcHHHHHHHHHH---hhhCHHHHH-HHHHHHHHHHHHHHHHHHh------c
Confidence 88876222111 1 111234 544 48999999999999 999999999 9999999999999999864 2
Q ss_pred CeeehhHHH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHH
Q 038386 184 DGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDV 262 (523)
Q Consensus 184 ~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~ 262 (523)
+.+|+.+.+ ..+++++++.+ ||.++++. +.+......+... ..|. +..+..+.+.++
T Consensus 147 ~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~~~~~~~~~~~~~--------~~P~-----------~~~~~~~~~~~~ 204 (415)
T 2zwu_A 147 GQCNFTEDYAEPFPIRIFMLL-AGLPEEDI--PHLKYLTDQMTRP--------DGSM-----------TFAEAKEALYDY 204 (415)
T ss_dssp TEEEHHHHTTTHHHHHHHHHH-HTCCGGGH--HHHHHHHHHHHSC--------CSSS-----------CHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHH-cCCCHHHH--HHHHHHHHHHHhc--------cCHH-----------HHHHHHHHHHHH
Confidence 379999765 78999999999 99987532 2333333222110 1132 234566677888
Q ss_pred HHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHH
Q 038386 263 FVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQA 342 (523)
Q Consensus 263 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 342 (523)
+.++|+++++. ...|+++.|++... ++..+++++++.++..+++||+|||+.+++|++++|++||++|+
T Consensus 205 ~~~~i~~r~~~---------~~~dll~~ll~~~~--~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~ 273 (415)
T 2zwu_A 205 LIPIIEQRRQK---------PGTDAISIVANGQV--NGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQ 273 (415)
T ss_dssp HHHHHHHHHHS---------CCSSHHHHHHTCEE--TTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHhC---------CCCCHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHH
Confidence 88888887752 34689999997652 34469999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCC
Q 038386 343 KILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPN 422 (523)
Q Consensus 343 ~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~ 422 (523)
++++|++ ||+|||+|+||++|+++ . + |.+.+|++++||.||||+.|.++.+++||||+
T Consensus 274 ~l~~E~~-------------------~l~a~i~E~lRl~p~~~-~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~ 331 (415)
T 2zwu_A 274 ELIERPE-------------------RIPAACEELLRRFSLVA-D-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDER 331 (415)
T ss_dssp HHHHCGG-------------------GHHHHHHHHHHHTCCBC-C-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTT
T ss_pred HHHhCHH-------------------HHHHHHHHHHhhcCCcC-C-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCch
Confidence 9999853 89999999999999999 5 7 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCcc
Q 038386 423 VWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDLS 501 (523)
Q Consensus 423 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~ 501 (523)
+|+||++|+|||| . ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ +.++.
T Consensus 332 ~~~dP~~F~PeR~--~-----------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~ 391 (415)
T 2zwu_A 332 ENACPMHVDFSRQ--K-----------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAP-GAQIQ 391 (415)
T ss_dssp TSSSTTSCCTTCS--S-----------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECT-TCCCC
T ss_pred hCCCccccCCCCC--C-----------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECC-Ccccc
Confidence 9999999999994 1 34899999999999999999999999999999998 99886 33332
Q ss_pred cccceEEeecCceeEEEeecC
Q 038386 502 EKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..+.+..+..+++|++++|.
T Consensus 392 -~~~~~~~~~~~lpv~~~~r~ 411 (415)
T 2zwu_A 392 -HKSGIVSGVQALPLVWDPAT 411 (415)
T ss_dssp -EECSSBCEESCCEEECCGGG
T ss_pred -cCCccccCcceeEEEEecCC
Confidence 23455677889999999985
No 40
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=3.2e-60 Score=461.82 Aligned_cols=383 Identities=18% Similarity=0.221 Sum_probs=303.2
Q ss_pred CCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc-ccceeeccccceeeCcCCchhH
Q 038386 59 FQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA-DDLIFANKRRGISTYPYGTTWR 137 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~g~~w~ 137 (523)
.+++.++.++ ++||+||++++++.++|+|++|+.+++++.++ +.|++++...... ...+....+.+++ ..+|+.|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMML-FQNQPDHR 89 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGG-GCCTTHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchh-hcCCchHH
Confidence 4688889888 58999999999999999999999999999765 6777766422110 0011111223454 44899999
Q ss_pred HHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhHHHH
Q 038386 138 VLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEIRE 216 (523)
Q Consensus 138 ~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~~~ 216 (523)
++|++++ ++|++..++ .+.+.+.+.+..+++.+.+ ++.+|+...+ ..++.++++. +||.+.++. +.
T Consensus 90 ~~Rr~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--~~ 156 (404)
T 3ejb_B 90 RLRTLAS---GAFTPRTTE-SYQPYIIETVHHLLDQVQG------KKKMEVISDFAFPLASFVIAN-IIGVPEEDR--EQ 156 (404)
T ss_dssp HHHHHHH---GGGSHHHHH-TTHHHHHHHHHHHHHTTTT------TSEEEHHHHTHHHHHHHHHHH-HHTCCGGGH--HH
T ss_pred HHHHHHH---hhcCHHHHH-HHHHHHHHHHHHHHHHhhh------cCCcchHHHHHHHHHHHHHHH-HcCCCHHHH--HH
Confidence 9999999 999999999 9999999999999998763 5678986554 5688899988 489876432 23
Q ss_pred HHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhC
Q 038386 217 LGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRL 296 (523)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 296 (523)
+......+.... ..|.. ....++..+..+.+.+++.++++++++. ...|+++.|+ ...
T Consensus 157 ~~~~~~~~~~~~-------~~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d~l~~ll-~~~ 214 (404)
T 3ejb_B 157 LKEWAASLIQTI-------DFTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH---------PQQDMISMLL-KGR 214 (404)
T ss_dssp HHHHHHHHHGGG-------STTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHH-HC-
T ss_pred HHHHHHHHHHhc-------cCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CcchHHHHHH-hcc
Confidence 333332222111 11322 1234566677888888999998887642 4578999999 332
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHh
Q 038386 297 PSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILE 376 (523)
Q Consensus 297 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E 376 (523)
++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++ ||+|||+|
T Consensus 215 --~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E 273 (404)
T 3ejb_B 215 --EKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-------------------LIGTAVEE 273 (404)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------------GHHHHHHH
T ss_pred --cCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHHHHHH
Confidence 456799999999999999999999999999999999999999999999864 79999999
Q ss_pred hhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcc
Q 038386 377 GLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREI 456 (523)
Q Consensus 377 ~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~ 456 (523)
+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||. .
T Consensus 274 ~lRl~p~~~~--~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~-------------------~ 332 (404)
T 3ejb_B 274 CLRYESPTQM--TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP-------------------N 332 (404)
T ss_dssp HHHHSCSBCE--EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS-------------------C
T ss_pred HHHhCCcccc--cceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC-------------------C
Confidence 9999999994 599999999999999999999999999999999999999999999982 3
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecCC
Q 038386 457 KMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 457 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 523 (523)
.++|||.|+|.|+|++||++|+++++++|+++| ++++.++++.+ ..+..+.+...++|++++|.+
T Consensus 333 ~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~--~~~~~~~~~~~lpv~~~~~~~ 398 (404)
T 3ejb_B 333 PHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWRY--RPLFGFRALEELPVTFEASWS 398 (404)
T ss_dssp CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--CCCB--CSCSSBCCBSCCEEECC----
T ss_pred CCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCCCcee--ccCcccCCcceeEEEEecccc
Confidence 489999999999999999999999999999999 99998644333 345567888999999998853
No 41
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=8.2e-61 Score=465.74 Aligned_cols=379 Identities=16% Similarity=0.159 Sum_probs=301.7
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCCCccccc-ceeec---cccceeeCcC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADD-LIFAN---KRRGISTYPY 132 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~i~~~~~ 132 (523)
..+++..+.+| ++||+|+++++ |+.++|+|+||+.+++|+.++ .|++++....+... .+... ...++++ .+
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 98 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIG-VD 98 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTT-CC
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccccccc-CC
Confidence 45789999999 89999999998 888999999999999999653 35555431111100 01110 1124444 59
Q ss_pred CchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH-HHHHHHhhhhhccCCcch
Q 038386 133 GTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR-YAIFYLLVKMCFGNNVEE 211 (523)
Q Consensus 133 g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~-~~~~~v~~~~~fG~~~~~ 211 (523)
|+.|+++|+++. +.|++..++ .+.+.+.+.++++++.+.. +++++|+...+. .+++++++. +||.+.++
T Consensus 99 g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 168 (408)
T 3abb_A 99 DPVHARQRRMLI---PSFGVKRMN-AIRPRLQSLVDRLLDDMLA-----KGPGADLVSAFALPVPSVAICE-LLGVPYGD 168 (408)
T ss_dssp TTHHHHHHHHHG---GGGCHHHHH-HHHHHHHHHHHHHHHHHHH-----TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred chHHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH
Confidence 999999999999 999999999 9999999999999999974 367899998876 488999987 79988743
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHH
Q 038386 212 QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~l 291 (523)
. +.+......+... + .. ++..+..+.+.+++.++|+++++. ...|+++.|
T Consensus 169 ~--~~~~~~~~~~~~~----------~--------~~-~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d~l~~l 218 (408)
T 3abb_A 169 H--DFFEECSRNFVGA----------A--------TS-AEADAAFGELYTYLHGLVGRKQAE---------PEDGLLDEL 218 (408)
T ss_dssp H--HHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS---------CCSSHHHHH
T ss_pred H--HHHHHHHHHHhcc----------c--------ch-HHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHH
Confidence 2 2333322221110 0 01 233446667778888888877653 336899999
Q ss_pred HHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHH
Q 038386 292 IELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLK 371 (523)
Q Consensus 292 l~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~ 371 (523)
++... ++..++++++++++..+++||+|||+++++|++++|++||++|+++++|+. ||+
T Consensus 219 l~~~~--~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------------------~l~ 277 (408)
T 3abb_A 219 IARQL--EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG-------------------AVS 277 (408)
T ss_dssp HHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH-------------------HHH
T ss_pred Hhccc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------hHH
Confidence 98763 345699999999999999999999999999999999999999999998753 799
Q ss_pred HHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccc
Q 038386 372 AVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDIT 451 (523)
Q Consensus 372 a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~ 451 (523)
|||+|+||++|+++ . ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||-
T Consensus 278 a~i~E~lRl~p~~~-~-~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~--------------- 340 (408)
T 3abb_A 278 GVVEELLRFTSVSD-H-IVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA--------------- 340 (408)
T ss_dssp HHHHHHHHHHCSSC-E-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC---------------
T ss_pred HHHHHHHHhcCccc-c-cceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC---------------
Confidence 99999999999999 4 599999999999999999999999999999999999999999999951
Q ss_pred ccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 452 RNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 452 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++..+..++....+.+..+...++|++++|.
T Consensus 341 ----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 341 ----RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp ----TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred ----CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCCC
Confidence 3589999999999999999999999999999999 899875222233333456678899999999884
No 42
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=1.2e-60 Score=463.70 Aligned_cols=379 Identities=16% Similarity=0.175 Sum_probs=304.1
Q ss_pred CCCCccHHHHHHHhhcCCeEEEEeCC--EeEEEecCHHHHHHHHHhCCcccccCCCCCccc--ccceeeccccceeeCcC
Q 038386 57 PLFQLGPIISTLRLKYGPIITVRMGS--EPSIYICNNTLAHQALINNGTVFADRPKSTSIA--DDLIFANKRRGISTYPY 132 (523)
Q Consensus 57 ~~~~~~~~~~~~~~kyG~i~~~~~~~--~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~ 132 (523)
.+++++.++.+++ +||+|+++++++ .+.++|++|+.+++|+.+ ..|.+++...... ...+.+..+.+++ ..+
T Consensus 25 ~g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~d 100 (411)
T 2dkk_A 25 DGPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLA-FAD 100 (411)
T ss_dssp SSSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCST-TCC
T ss_pred ccccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccc-cCC
Confidence 4567889999998 799999998764 679999999999999954 3576654332110 0022211023454 459
Q ss_pred CchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH-HHHHHHhhhhhccCCcch
Q 038386 133 GTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR-YAIFYLLVKMCFGNNVEE 211 (523)
Q Consensus 133 g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~-~~~~~v~~~~~fG~~~~~ 211 (523)
|+.|+++|++++ ++|++..++ .+.+.+.+.++++++.+... ++++|+...+. .+++++++. +||.+.++
T Consensus 101 g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~-----g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~ 170 (411)
T 2dkk_A 101 QPDHNRLRRAVA---GAFTVGATK-RLRPRAQEILDGLVDGILAE-----GPPADLVERVLEPFPIAVVSE-VMGVPAAD 170 (411)
T ss_dssp TTHHHHHHHHHG---GGSSHHHHH-HHHHHHHHHHHHHHHHHHHH-----CSCEEHHHHTTTHHHHHHHHH-HHTCCSSH
T ss_pred chHHHHHHHHhh---HhhCHHHHH-HHHHHHHHHHHHHHHHHHhc-----CCCeehHHHHHHHHHHHHHHH-HhCCCHHH
Confidence 999999999999 999999999 99999999999999999762 56899997775 699999998 59998753
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHH
Q 038386 212 QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~l 291 (523)
. +.+...... +....+ .+++..+....+.+++.++|+++++. ...|+++.|
T Consensus 171 ~--~~~~~~~~~---------~~~~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~---------~~~dll~~l 221 (411)
T 2dkk_A 171 R--ERVHSWTRQ---------IISTSG---------GAEAAERAKRGLYGWITETVRARAGS---------EGGDVYSML 221 (411)
T ss_dssp H--HHHHHHHGG---------GCSSCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC---------CSSCHHHHH
T ss_pred H--HHHHHHHHH---------HHhccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHH
Confidence 1 222211111 011111 12445566777788888888776532 346899999
Q ss_pred HHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHH
Q 038386 292 IELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLK 371 (523)
Q Consensus 292 l~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~ 371 (523)
++. . ++..++++++++++..+++|| |||+.+++|++++|++||++|++|++|++ ||+
T Consensus 222 l~~-~--~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~ 278 (411)
T 2dkk_A 222 GAA-V--GRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG-------------------ARG 278 (411)
T ss_dssp HHH-H--HTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT-------------------CCH
T ss_pred HHh-c--CCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HHH
Confidence 987 2 455799999999999999999 99999999999999999999999999863 799
Q ss_pred HHHHhhhcCCCCCC-C-CCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcc
Q 038386 372 AVILEGLRRHPPVY-L-LDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLD 449 (523)
Q Consensus 372 a~i~E~lRl~~~~~-~-~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~ 449 (523)
|||+|+||++|+++ . . +|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 279 a~i~E~lRl~p~~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~------------- 343 (411)
T 2dkk_A 279 TALDELLRWISHRTSVGL--ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP------------- 343 (411)
T ss_dssp HHHHHHHHHSCCBSSCCC--CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS-------------
T ss_pred HHHHHHHhhCCccccCcc--ceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC-------------
Confidence 99999999999999 6 5 89999999999999999999999999999999999999999999985
Q ss_pred ccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 450 ITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 450 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+..++.+++|++++|+
T Consensus 344 ------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 344 ------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp ------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCCC
T ss_pred ------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccCC
Confidence 2489999999999999999999999999999999 899886322222333456788899999999985
No 43
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=1.5e-60 Score=462.71 Aligned_cols=373 Identities=12% Similarity=0.060 Sum_probs=304.7
Q ss_pred CCCccHHHHHHHhhc--CCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCch
Q 038386 58 LFQLGPIISTLRLKY--GPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTT 135 (523)
Q Consensus 58 ~~~~~~~~~~~~~ky--G~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~ 135 (523)
..+++.++.+|+++| |+|+++++++ +.++|+||+.+++|+ ++.+.|++++...... . .. .+...++..+|+.
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~--~-~~-~~~~~~~~~~g~~ 91 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRY--E-TG-EFELMMAGQDDPV 91 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC--------CCCTTTTCCTTH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCC--C-Cc-ccccCcccCCchH
Confidence 457899999999999 9999999876 489999999999999 5666888877654322 1 11 1123334569999
Q ss_pred hHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhHH
Q 038386 136 WRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEI 214 (523)
Q Consensus 136 w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~ 214 (523)
|+++|+++. +.|++..++ .+.+.+.+.+.++++.+.+ ++.+|+...+ ..+++++++. +||.+.++ .
T Consensus 92 ~~~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~ 158 (398)
T 4fb2_A 92 HKKYRQLVA---KPFSPEATD-LFTEQLRQSTNDLIDARIE------LGEGDAATWLANEIPARLTAI-LLGLPPED--G 158 (398)
T ss_dssp HHHHHHHHH---TTTCHHHHH-TTHHHHHHHHHHHHHTTTT------TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG--H
T ss_pred HHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--H
Confidence 999999999 999999999 9999999999999988754 4568875554 6899999999 79987633 2
Q ss_pred HHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHh
Q 038386 215 RELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIEL 294 (523)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~ 294 (523)
+.+......+.. +.. .++..+..+.+.+++.++|+++++. ...|+++.|++.
T Consensus 159 ~~~~~~~~~~~~-----------~~~--------~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d~l~~ll~~ 210 (398)
T 4fb2_A 159 DTYRRWVWAITH-----------VEN--------PEEGAEIFAELVAHARTLIAERRTN---------PGNDIMSRVIMS 210 (398)
T ss_dssp HHHHHHHHHHHH-----------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHHC
T ss_pred HHHHHHHHHHhc-----------CCC--------HHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHHc
Confidence 333333333221 110 1245667778888899999888763 457999999987
Q ss_pred hCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHH
Q 038386 295 RLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVI 374 (523)
Q Consensus 295 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i 374 (523)
.. ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++ +|+|||
T Consensus 211 ~~--~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i 269 (398)
T 4fb2_A 211 KI--DGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-------------------LIPNAV 269 (398)
T ss_dssp CB--TTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHH
T ss_pred cc--CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HHHHHH
Confidence 63 344699999999999999999999999999999999999999999999964 689999
Q ss_pred HhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccC
Q 038386 375 LEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNR 454 (523)
Q Consensus 375 ~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~ 454 (523)
+|+||++|+++ . +|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 270 ~E~lRl~p~~~-~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------------ 328 (398)
T 4fb2_A 270 DELLRFYGPAM-V--GRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP------------------ 328 (398)
T ss_dssp HHHHHHHCCBC-E--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS------------------
T ss_pred HHHHHhCCCcC-C--CeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC------------------
Confidence 99999999999 7 89999999999999999999999999999999999999999999972
Q ss_pred cccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 455 EIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 455 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..++|||.|+|.|+|++||.+|++++++.|+++| ++++.++. +..... ........++|++++|.
T Consensus 329 -~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~-~~~~~~~~lpv~~~~~~ 394 (398)
T 4fb2_A 329 -NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK-ECEWLM-GQVAGMLHVPIIFPKGK 394 (398)
T ss_dssp -CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS-CCEEEC-SSBCEEEECEEECCCCC
T ss_pred -CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC-Cceecc-ccccccceeEEEEcCCC
Confidence 3589999999999999999999999999999999 99998732 122222 33455567999998874
No 44
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=2e-61 Score=484.08 Aligned_cols=427 Identities=13% Similarity=0.095 Sum_probs=301.9
Q ss_pred cCCCCCCCCCCCccceeeecccccC--CCCCccHHHHHHHhhcCC-eEEEEeCCEeE-------EEecCHHHHHHHHHhC
Q 038386 32 EISTQNLPPGPPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGP-IITVRMGSEPS-------IYICNNTLAHQALINN 101 (523)
Q Consensus 32 ~~~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~-i~~~~~~~~~~-------v~v~~p~~i~~i~~~~ 101 (523)
...+.+.||||+++|++|+++++.. ...+++.++.++++|||+ ||++++++.++ +++.+++..+.++.
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~-- 100 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFD-- 100 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGC--
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecc--
Confidence 3445678999999999999987742 246789999999999999 99999999887 56677666655552
Q ss_pred CcccccCCC----CCcccccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHH
Q 038386 102 GTVFADRPK----STSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKRE 177 (523)
Q Consensus 102 ~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~ 177 (523)
...+.++.. +.... .++|......++..+|+.|+++|+++. +.|++.. + .+.+.+++.+.++++.|.+.
T Consensus 101 ~~~v~k~~~~~~~~~~~~--~l~g~~~~~~~~~~~g~~h~~~R~~~~---~~f~~~~-~-~~~~~i~~~~~~ll~~~~~~ 173 (495)
T 3dsk_A 101 VDKVEKKDLLTGTYMPST--ELTGGYRILSYLDPSEPKHEKLKNLLF---FLLKSSR-N-RIFPEFQATYSELFDSLEKE 173 (495)
T ss_dssp TTTEECSSCTTSSSCCCG--GGGTTCCCGGGCCTTSHHHHHHHHHHH---HHHHHTT-T-THHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCc--cccCCCcceeeeCCCchHHHHHHHHHH---HHHHHHH-H-HHHHHHHHHHHHHHHHHHHH
Confidence 211111111 11111 344432223344458999999999999 8998754 7 89999999999999999875
Q ss_pred hhhcCCCeeehhHHHHHHHHHHhhhhhccCCcchh-HHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHH-HHh
Q 038386 178 YCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQ-EIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKF-LGI 255 (523)
Q Consensus 178 ~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~-~~~ 255 (523)
.. +++++|+.+++..+++++++.++||.+.+.. ..+.+......+.. ....|.+...++ ...... .+.
T Consensus 174 ~~--~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~p-~~~~~~~~~~ 243 (495)
T 3dsk_A 174 LS--LKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVL-------FNLHPLLSIGLP-RVIEEPLIHT 243 (495)
T ss_dssp HH--HHSSEESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHH-------HHHGGGCCCSSC-HHHHHHHHSS
T ss_pred hc--cCCCccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHH-------HhhhhHhHhccH-HHHHHHHHHh
Confidence 44 3668999999999999999999999887432 11122222222211 112232211111 000111 000
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHH-hhcccchHHHHHHHHHHH
Q 038386 256 IRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFI-SHGSDTIATALHWVMANV 334 (523)
Q Consensus 256 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L 334 (523)
.+.......+..++..+ ...+.++.+++.. .+..+++++++.+++.++ +||++||+.+++|++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~---~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L 310 (495)
T 3dsk_A 244 FSLPPALVKSDYQRLYE----------FFLESAGEILVEA---DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRI 310 (495)
T ss_dssp SCCCGGGGHHHHHHHHH----------HHHHHCHHHHHHH---HHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred hcccchhhhhhHHHHHH----------HHHHHHHHHHHHH---HhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 00000000000000000 0023334555544 345689999998666655 999999999999999999
Q ss_pred Hh-CcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee----CCEEeCCCCE
Q 038386 335 VK-YPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL----GGYLVTKGIS 409 (523)
Q Consensus 335 ~~-~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~ 409 (523)
+. ||++|++||+|++++++.++..++.+++.++|||+|||+|+||++|+++.. .|.+.+|+++ +||.||||+.
T Consensus 311 ~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~--~r~a~~d~~l~~~~~g~~IpkG~~ 388 (495)
T 3dsk_A 311 GRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQ--YGRAKKDLVIESHDAAFKVKAGEM 388 (495)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEEECSSCEEEECTTCE
T ss_pred HhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCcccc--ceeecCCeEeccCCCceEECCCCE
Confidence 95 999999999999999987667899999999999999999999999999987 6779999999 4999999999
Q ss_pred EeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc
Q 038386 410 VNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF 489 (523)
Q Consensus 410 v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f 489 (523)
|+++.+++|+||++|+||++|+|+||++.+... ......-.....++|||+|+|.|||++||.+|++++++.|+++|
T Consensus 389 v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~---~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f 465 (495)
T 3dsk_A 389 LYGYQPLATRDPKIFDRADEFVPERFVGEEGEK---LLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465 (495)
T ss_dssp EEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHH---GGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred EEeccHHhhCCcccCCCccccCCcccCCCCccc---hhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999763100 00000000012345555666999999999999999999999999
Q ss_pred EeEecC
Q 038386 490 EWNKAD 495 (523)
Q Consensus 490 ~~~~~~ 495 (523)
++...+
T Consensus 466 ~~~~~~ 471 (495)
T 3dsk_A 466 DSFDIE 471 (495)
T ss_dssp EEEEEE
T ss_pred ceEeCC
Confidence 987765
No 45
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=3.4e-60 Score=461.41 Aligned_cols=383 Identities=17% Similarity=0.172 Sum_probs=302.9
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCC--CCc---cccc-ceeec-cccceeeC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPK--STS---IADD-LIFAN-KRRGISTY 130 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~~~---~~~~-~~~~~-~~~~i~~~ 130 (523)
..+++..+.+| ++||+|+++++++.++|+|+||+.+++|+.++ .+++++. +.. .... .+++. ...+++ .
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 89 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAVENMF-T 89 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHCCSGG-G
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc-c
Confidence 45788999999 99999999999999999999999999999644 2444331 110 0000 01110 122444 4
Q ss_pred cCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH-HHHHHHhhhhhccCCc
Q 038386 131 PYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR-YAIFYLLVKMCFGNNV 209 (523)
Q Consensus 131 ~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~-~~~~~v~~~~~fG~~~ 209 (523)
.+|+.|+++|+++. ++|++..++ .+.+.+.+.++++++.+.+.. +++++|+.+.+. .+++++++. +||.+.
T Consensus 90 ~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 161 (408)
T 1odo_A 90 AYGPNHRKLRRLVA---PAFSARRVD-AMRPAVEAMVTGLVDRLAELP---AGEPVDLRQELAYPLPIAVIGH-LMGVPQ 161 (408)
T ss_dssp CCHHHHHHHHHTTG---GGGSHHHHH-HHHHHHHHHHHHHHHHHHHSC---TTSCEEHHHHTTTHHHHHHHHH-HHTCCH
T ss_pred cCChHHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHhhc---CCCCcchHHHHhhhhHHHHHHH-HhCCCH
Confidence 58999999999999 999999999 999999999999999997642 267899998886 599999996 799876
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHH
Q 038386 210 EEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVD 289 (523)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~ 289 (523)
++ .+.+......++. +.. . .++..+..+.+.+++.++|+++++. ...|+++
T Consensus 162 ~~--~~~~~~~~~~~~~-----------~~~----~---~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d~l~ 212 (408)
T 1odo_A 162 DR--RDGFRALVDGVFD-----------TTL----D---QAEAQANTARLYEVLDQLIAAKRAT---------PGDDMTS 212 (408)
T ss_dssp HH--HHHHHHHHHHHHC-----------TTC----C---HHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHH
T ss_pred HH--HHHHHHHHHHHhc-----------ccC----C---HHHHHHHHHHHHHHHHHHHHHHhhC---------CCCCHHH
Confidence 32 2233332222111 000 0 1345567777888888888887653 3468999
Q ss_pred HHHHhhCCC-CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCCh
Q 038386 290 TLIELRLPS-DRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMP 368 (523)
Q Consensus 290 ~ll~~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp 368 (523)
.|++...++ .+..++++++..++..+++||+|||+++++|++++|++||++|++|++|+ +
T Consensus 213 ~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-------------------~ 273 (408)
T 1odo_A 213 LLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE-------------------V 273 (408)
T ss_dssp HHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-------------------S
T ss_pred HHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------------------H
Confidence 999876421 14569999999999999999999999999999999999999999999973 3
Q ss_pred hHHHHHHhhhcCCCCCCCCCCCcccccCceeC-CEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCC
Q 038386 369 YLKAVILEGLRRHPPVYLLDTPHAVTEDVELG-GYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNN 447 (523)
Q Consensus 369 ~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~ 447 (523)
||+|||+|+||++|+++.. ++|.+.+|++++ ||.||||+.|.++.+++||||++|+||++|+|||+ .
T Consensus 274 ~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~--~--------- 341 (408)
T 1odo_A 274 TWADVVEETLRHEPAVKHL-PLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT--V--------- 341 (408)
T ss_dssp CHHHHHHHHHHHSCSBSCE-EEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS--C---------
T ss_pred HHHHHHHHHHhhCCCccCC-cceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC--C---------
Confidence 7999999999999999965 599999999999 99999999999999999999999999999999993 1
Q ss_pred ccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEee
Q 038386 448 LDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISP 520 (523)
Q Consensus 448 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (523)
..|+|||.|+|.|+|++||++|++++++.|+++| ++++..+..++....+.++++..+++|++++
T Consensus 342 --------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 342 --------KEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp --------CCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred --------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence 4599999999999999999999999999999999 7998752223444445667888999999875
No 46
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=7.6e-60 Score=458.91 Aligned_cols=376 Identities=15% Similarity=0.173 Sum_probs=300.7
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCC-Cccc-ccceeeccccceeeCcCCc
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKS-TSIA-DDLIFANKRRGISTYPYGT 134 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~i~~~~~g~ 134 (523)
..+++.++.++ ++||+|+++++ ++.+.++|+||+.+++|+.++ .|.+++.. ..+. ..... .+.++++ .+|+
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~--~~~~l~~-~dg~ 109 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEM--VKGGLLS-MDPP 109 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSC--CCCSGGG-CCTT
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccc--ccccCcc-CCch
Confidence 45789999999 89999999997 789999999999999999653 46665433 2110 00111 1235544 4899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhH
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~ 213 (523)
.|+++|+++. +.|++..++ .+.+.+.+.++++++.+.. ++.++|+...+ ..+++++++. +||.+.++.
T Consensus 110 ~h~~~R~~l~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~-----~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~- 178 (417)
T 2y5n_A 110 EHSRLRRLVV---KAFTARRAE-SLRPRAREIAHELVDQMAA-----TGQPADLVAMFARQLPVRVICE-LLGVPSADH- 178 (417)
T ss_dssp HHHHHHHHHH---HHSCHHHHH-HTHHHHHHHHHHHHHHHHH-----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-
T ss_pred HHHHHHHHHh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh-----CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH-
Confidence 9999999999 999999999 9999999999999999974 13379998766 4689999998 699887431
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
+.+......+ +.... .. .++..+..+.+.+++.++|+++++. ...|+++.|++
T Consensus 179 -~~~~~~~~~~------------~~~~~--~~---~~~~~~~~~~l~~~~~~~i~~r~~~---------~~~dll~~ll~ 231 (417)
T 2y5n_A 179 -DRFTRWSGAF------------LSTAE--VT---AEEMQEAAEQAYAYMGDLIDRRRKE---------PTDDLVSALVQ 231 (417)
T ss_dssp -HHHHHHHHTT------------STTCC--CC---HHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHH
T ss_pred -HHHHHHHHHH------------hcccC--CC---HHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHh
Confidence 2222222111 10000 01 1355667778888889988887653 34689999998
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
... ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|+. ||+||
T Consensus 232 ~~~--~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~ 290 (417)
T 2y5n_A 232 ARD--QQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE-------------------LIPSA 290 (417)
T ss_dssp CCB--TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHH
T ss_pred hhc--cCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHHH
Confidence 753 345699999999999999999999999999999999999999999999852 79999
Q ss_pred HHhhhcCCCCCC-CCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccc
Q 038386 374 ILEGLRRHPPVY-LLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITR 452 (523)
Q Consensus 374 i~E~lRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~ 452 (523)
|+|+||++|+++ .. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 291 i~E~lRl~p~~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------- 353 (417)
T 2y5n_A 291 VEELTRWVPLGVGTA-FPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP---------------- 353 (417)
T ss_dssp HHHHHHHCCCBSSCC-SCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------------
T ss_pred HHHHHHhcCCccccc-cceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------------
Confidence 999999999999 44 599999999999999999999999999999999999999999999973
Q ss_pred cCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEE
Q 038386 453 NREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 453 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+.++...++|++
T Consensus 354 ---~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 417 (417)
T 2y5n_A 354 ---NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW 417 (417)
T ss_dssp ---CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred ---CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence 3489999999999999999999999999999999 59988632233333455567778888763
No 47
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-59 Score=455.81 Aligned_cols=376 Identities=14% Similarity=0.146 Sum_probs=305.7
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhH
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWR 137 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~ 137 (523)
..+++.++.++++ ||+|| +++. ++|+|++|+.+++|+.++ +.|++++... .. .+ + +.++++ .+|+.|+
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~--~~~~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~--~~-~--~~~l~~-~~g~~h~ 84 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVF--RDRN-GLAAASTYQAVIDAERQP-ELFSNAGGIR-PD--QP-A--LPMMID-MDDPAHL 84 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEE--ECTT-CCEEECSHHHHHHHHTCT-TTEESTTCSS-TT--SC-C--CSSGGG-CCTTHHH
T ss_pred ccChhHHHHHHHh-cCCee--ecCC-CeEEEecHHHHHHHHhCc-ccccCccccC-Cc--cc-c--cccccc-cCchHHH
Confidence 3478889999987 99999 5555 689999999999999653 4688776533 21 22 2 234544 4899999
Q ss_pred HHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehh-HHHHHHHHHHhhhhhccCCcchhHHHH
Q 038386 138 VLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVC-EHFRYAIFYLLVKMCFGNNVEEQEIRE 216 (523)
Q Consensus 138 ~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~-~~~~~~~~~v~~~~~fG~~~~~~~~~~ 216 (523)
++|+++. ++|++..++ .+.+.+.+.+.++++.+.+ ++.+|+. ++...+++++++.+ ||.+.++. +.
T Consensus 85 ~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--~~ 151 (398)
T 2xkr_A 85 LRRKLVN---AGFTRKRVK-DKEASIAALCDTLIDAVCE------RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR--DM 151 (398)
T ss_dssp HHHHHHG---GGSCHHHHH-TTHHHHHHHHHHHHHTTTT------TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH--HH
T ss_pred HHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHhhhh------cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH--HH
Confidence 9999999 999999999 9999999999999998854 3479999 55568999999998 99987532 33
Q ss_pred HHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhC
Q 038386 217 LGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRL 296 (523)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 296 (523)
+......+... ..|.+. ...+++..+..+.+.+++.++|+++++. ...|+++.|++...
T Consensus 152 ~~~~~~~~~~~--------~~~~~~----p~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll~~ll~~~~ 210 (398)
T 2xkr_A 152 FLRWSDDLVTF--------LSSHVS----QEDFQITMDAFAAYNDFTRATIAARRAD---------PTDDLVSVLVSSEV 210 (398)
T ss_dssp HHHHHHHHHHH--------HTSCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHHCCB
T ss_pred HHHHHHHHHhc--------cCcccc----hhhHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHHhhc
Confidence 44433333221 123221 1234566677888889999999887652 34789999998753
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHh
Q 038386 297 PSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILE 376 (523)
Q Consensus 297 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E 376 (523)
++..+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++ ||+|||+|
T Consensus 211 --~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E 269 (398)
T 2xkr_A 211 --DGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS-------------------LLPGAIEE 269 (398)
T ss_dssp --TTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------------GHHHHHHH
T ss_pred --cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHHHHHH
Confidence 345699999999999999999999999999999999999999999999964 89999999
Q ss_pred hhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcc
Q 038386 377 GLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREI 456 (523)
Q Consensus 377 ~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~ 456 (523)
+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||. .
T Consensus 270 ~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------------------~ 328 (398)
T 2xkr_A 270 MLRWTAPVKNM--CRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNP-------------------N 328 (398)
T ss_dssp HHHHHCSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSS-------------------C
T ss_pred HHhhcccccCc--ceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCC-------------------C
Confidence 99999999965 99999999999999999999999999999999999999999999974 1
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcc-cccceEEeecCceeEEEeecC
Q 038386 457 KMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLS-EKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 457 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~ 522 (523)
.++|||.|+|.|+|++||++|++++++.|+++| ++++.+ +.++. ...+....+..+++|++++|.
T Consensus 329 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~~lpv~~~p~~ 395 (398)
T 2xkr_A 329 SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVA-DDSVLPLRPANFVSGLESMPVVFTPSP 395 (398)
T ss_dssp CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESC-TTCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECC-CcceecccCcccccCccceeEEecCCC
Confidence 389999999999999999999999999999999 599875 33332 023445677889999998874
No 48
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=1.8e-60 Score=463.17 Aligned_cols=390 Identities=15% Similarity=0.194 Sum_probs=305.1
Q ss_pred eeeecccccC--CCCCccHHHHHHHhhcCCeE-----EEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC-cccccc
Q 038386 47 LLAHLLWHRK--PLFQLGPIISTLRLKYGPII-----TVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST-SIADDL 118 (523)
Q Consensus 47 ~~G~~~~~~~--~~~~~~~~~~~~~~kyG~i~-----~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~~~~ 118 (523)
..|+.+++.. ...+++.++.+++ +||||+ ++++ .++++|+||+.+++|+.++ ..|++++... .+. ..
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~-~~ 85 (414)
T 2uuq_A 11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYG-EL 85 (414)
T ss_dssp --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTT-HH
T ss_pred hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccC-cc
Confidence 3455555543 2457889999985 799999 7776 5689999999999999765 6688876542 110 00
Q ss_pred ee-e-ccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehh-HHHHHH
Q 038386 119 IF-A-NKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVC-EHFRYA 195 (523)
Q Consensus 119 ~~-~-~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~-~~~~~~ 195 (523)
.+ + ..+.++++. +|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.+ .+.+|+. +++..+
T Consensus 86 ~~~~~~~~~~l~~~-~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------~~~vdl~~~~~~~~ 154 (414)
T 2uuq_A 86 EMIGLHDTPPMVMQ-DPPVHTEFRKLVS---RGFTPRQVE-TVEPTVRKFVVERLEKLRA------NGGGDIVTELFKPL 154 (414)
T ss_dssp HHHTCSSSCCGGGC-CTTHHHHHHHHHH---TTSSHHHHH-HHHHHHHHHHHHHHHHHHH------TTEEEHHHHTTTHH
T ss_pred cccccccccccccC-CchhHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh------cCCccHHHHHHHHh
Confidence 12 2 123456555 8999999999999 999999999 9999999999999999976 2469997 566899
Q ss_pred HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhc-cccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHH
Q 038386 196 IFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIM-PDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIK 274 (523)
Q Consensus 196 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 274 (523)
++++++. +||.++++. +.+......+... ..+ |.. ++..+....+.+++.++|+++++.
T Consensus 155 ~~~vi~~-~~G~~~~~~--~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~- 214 (414)
T 2uuq_A 155 PSMVVAH-YLGVPEEDW--TQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE- 214 (414)
T ss_dssp HHHHHHH-HTTCCGGGH--HHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHH-HhCCCHHHH--HHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9999999 699987532 2333333322221 112 221 122345566777888888776542
Q ss_pred hhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhc
Q 038386 275 QENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQ 354 (523)
Q Consensus 275 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~ 354 (523)
...|+++.|++...++++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus 215 --------~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------ 280 (414)
T 2uuq_A 215 --------PADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------ 280 (414)
T ss_dssp --------CCSSHHHHHHHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------
T ss_pred --------CCCCHHHHHHhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------
Confidence 346899999987532133458999999999999999999999999999999999999999999985
Q ss_pred CCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC-CCCCCCCCC
Q 038386 355 GQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW-EDPLEFKPE 433 (523)
Q Consensus 355 ~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~ 433 (523)
+||+|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||
T Consensus 281 -------------~~l~a~i~E~lRl~p~~~~--~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~Pe 345 (414)
T 2uuq_A 281 -------------EGIPDAVEELLRLTSPVQG--LARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 345 (414)
T ss_dssp -------------GGHHHHHHHHHHHHCSBCC--EEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTT
T ss_pred -------------HHHHHHHHHHHHhCCCcCC--cceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCC
Confidence 3899999999999999994 599999999999999999999999999999999999 999999999
Q ss_pred cccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecC
Q 038386 434 RFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKN 512 (523)
Q Consensus 434 Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~ 512 (523)
||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++++.+ ..+.+..+..
T Consensus 346 R~~-------------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~--~~~~~~~~~~ 404 (414)
T 2uuq_A 346 RCP-------------------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVW--SGGSYVRRPL 404 (414)
T ss_dssp CCC-------------------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGGGCEE--CCCSSBCCEE
T ss_pred CCC-------------------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCCccc--cccccccCcc
Confidence 984 2489999999999999999999999999999999 69987433333 3355668888
Q ss_pred ceeEEEeecC
Q 038386 513 PLHARISPRV 522 (523)
Q Consensus 513 ~~~~~~~~r~ 522 (523)
+++|++++|.
T Consensus 405 ~lpv~~~~r~ 414 (414)
T 2uuq_A 405 SVPFRVTSSR 414 (414)
T ss_dssp ECEEEEC---
T ss_pred eeEEEecCCC
Confidence 9999999873
No 49
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=5.2e-60 Score=458.66 Aligned_cols=378 Identities=18% Similarity=0.168 Sum_probs=300.8
Q ss_pred CCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCccc---ccceeecc-ccceeeCcCCc
Q 038386 59 FQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIA---DDLIFANK-RRGISTYPYGT 134 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~i~~~~~g~ 134 (523)
.+++.++..+ ++||+|++ + +.++++|+||+.+++|+.+ ..|.+++....+. ....+... +.++++. +|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cch
Confidence 3677888877 58999998 6 5778999999999999954 3566543211000 00011110 2355444 899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhH-HHHHHHHHHhhhhhccCCcchhH
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCE-HFRYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~-~~~~~~~~v~~~~~fG~~~~~~~ 213 (523)
.|+++|+++. ++|++..++ .+.+.+.+.++++++.+.. ++++|+.. +...+++++++.+ ||.+.++.
T Consensus 86 ~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~- 153 (397)
T 3buj_A 86 DHGRLRGVVG---PAFSPSALR-RLEPVIAGTVDDLLRPALA------RGAMDVVDELAYPLALRAVLGL-LGLPAADW- 153 (397)
T ss_dssp HHHHHHHHHG---GGSSTTTTG-GGHHHHHHHHHHHHHHHHT------TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-
T ss_pred hHHHHHHHHH---HhcCHHHHH-HHHHHHHHHHHHHHHHHhh------cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH-
Confidence 9999999999 999999999 9999999999999999863 45899875 4578999999998 99987532
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
+.+......+.. .++.. +....+++..+..+.+.+++.++|+++++. ...|+++.|++
T Consensus 154 -~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll~~ll~ 211 (397)
T 3buj_A 154 -GAVGRWSRDVGR---------TLDRG---ASAEDMRRGHAAIAEFADYVERALARRRRE---------GGEDLLALMLD 211 (397)
T ss_dssp -HHHHHHHHHHHG---------GGCSS---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------CCCSHHHHHHH
T ss_pred -HHHHHHHHHHHh---------hcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCCCHHHHHHH
Confidence 233333332221 11111 112234566677888889999999888764 34689999998
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
... ++. +++++++.++..+++||+|||+++++|++++|++||++|+++++|++ ||+||
T Consensus 212 ~~~--~~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~ 269 (397)
T 3buj_A 212 AHD--RGL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD-------------------LLAQA 269 (397)
T ss_dssp HHH--TTS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------------GHHHH
T ss_pred hhh--cCC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH-------------------HHHHH
Confidence 752 223 99999999999999999999999999999999999999999999852 89999
Q ss_pred HHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccccc
Q 038386 374 ILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRN 453 (523)
Q Consensus 374 i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~ 453 (523)
|+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 270 i~E~lRl~p~~~~--~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------------- 330 (397)
T 3buj_A 270 VEECLRYDPSVQS--NTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------------- 330 (397)
T ss_dssp HHHHHHHSCSCCE--EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC-----------------
T ss_pred HHHHHhhcCcccC--cceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC-----------------
Confidence 9999999999994 599999999999999999999999999999999999999999999985
Q ss_pred CcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeec
Q 038386 454 REIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPR 521 (523)
Q Consensus 454 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 521 (523)
..++|||.|+|.|+|++||++|++++++.| ++| ++++.++..+.....+.+..++.+++|++++|
T Consensus 331 --~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r 396 (397)
T 3buj_A 331 --VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG 396 (397)
T ss_dssp --CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred --CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence 237999999999999999999999999999 999 89998632222333455678899999999988
No 50
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=3e-60 Score=463.09 Aligned_cols=383 Identities=17% Similarity=0.209 Sum_probs=307.4
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCC-----CC-c-ccccceeecc-ccceee
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPK-----ST-S-IADDLIFANK-RRGIST 129 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-----~~-~-~~~~~~~~~~-~~~i~~ 129 (523)
..+++.++.++ ++||+|++ + ++.++|+|++|+.+++|+.++. |++++. .. . .. ..++.. +.++++
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 97 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAI--PELSDMKKYGLFG 97 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSS--GGGHHHHHHSTTT
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--cccccccccccccccccc--chhhhhccccccc
Confidence 45789999999 78999998 6 6778999999999999996553 887762 11 0 01 112111 234544
Q ss_pred CcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH-HHHHHHHHhhhhhccCC
Q 038386 130 YPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH-FRYAIFYLLVKMCFGNN 208 (523)
Q Consensus 130 ~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~-~~~~~~~v~~~~~fG~~ 208 (523)
.+|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.. ++++|+... ...+++++++.+ ||.+
T Consensus 98 -~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------~~~~d~~~~~~~~~~~~vi~~~-fG~~ 165 (419)
T 1q5d_A 98 -LPPEDHARVRKLVN---PSFTSRAID-LLRAEIQRTVDQLLDARSG------QEEFDVVRDYAEGIPMRAISAL-LKVP 165 (419)
T ss_dssp -SCHHHHHHHHHHHG---GGGSHHHHG-GGHHHHHHHHHHHHHHHTT------SSCEETTTTTGGGSHHHHHHHH-TTCC
T ss_pred -CCchHHHHHHHHHH---HhcCHHHHH-HHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHH-hCCC
Confidence 48999999999999 999999999 9999999999999998864 347999865 488999999998 9998
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCcc-ch
Q 038386 209 VEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSE-SY 287 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-d~ 287 (523)
.++. +.+......+..... ...+|+... .+++..+....+.+++.++|+++++. ... |+
T Consensus 166 ~~~~--~~~~~~~~~~~~~~~----~~~~P~~~~-----~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~~dl 225 (419)
T 1q5d_A 166 AECD--EKFRRFGSATARALG----VGLVPRVDE-----ETKTLVASVTEGLALLHGVLDERRRN---------PLENDV 225 (419)
T ss_dssp GGGH--HHHHHHHHHHHHHTT----TTTSSCCCS-----CHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSCH
T ss_pred HHHH--HHHHHHHHHHHHhcc----cccccCChH-----HHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCCH
Confidence 7532 334444433333211 123443321 23456677788888999999887652 335 89
Q ss_pred HHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCC
Q 038386 288 VDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKM 367 (523)
Q Consensus 288 l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l 367 (523)
++.|++... ++..+++++++.++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 226 l~~ll~~~~--~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------- 284 (419)
T 1q5d_A 226 LTMLLQAEA--DGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------- 284 (419)
T ss_dssp HHHHHHHHH--SSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------
T ss_pred HHHHHhhhc--cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------------
Confidence 999998753 34569999999999999999999999999999999999999999999984
Q ss_pred hhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCC
Q 038386 368 PYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNN 447 (523)
Q Consensus 368 p~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~ 447 (523)
.||+|||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||| .
T Consensus 285 ~~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------- 352 (419)
T 1q5d_A 285 GLMRNALDEVLRFDNILRIG-TVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T--------- 352 (419)
T ss_dssp GGHHHHHHHHHHHSCSBSSE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C---------
T ss_pred HHHHHHHHHHHHhCCccccc-cceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C---------
Confidence 38999999999999999954 59999999999999999999999999999999999999999999993 1
Q ss_pred ccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecCC
Q 038386 448 LDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRVN 523 (523)
Q Consensus 448 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 523 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .++. .+.+..++.+++|++++|++
T Consensus 353 --------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~~~~~l~v~~~~r~~ 418 (419)
T 1q5d_A 353 --------SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET-PVFG--YHPAFRNIESLNVILKPSKA 418 (419)
T ss_dssp --------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-CEEC--CCSSBCCEEECEEESSCC--
T ss_pred --------CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC-cccc--cccccCCCceeEEEEecCCC
Confidence 3589999999999999999999999999999999 8998863 2332 34566788899999999864
No 51
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=2.6e-60 Score=465.24 Aligned_cols=397 Identities=14% Similarity=0.088 Sum_probs=306.0
Q ss_pred CCCCCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEE--------eCCEeEEEecCHHHHHHHHHhCCccccc
Q 038386 36 QNLPPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVR--------MGSEPSIYICNNTLAHQALINNGTVFAD 107 (523)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~--------~~~~~~v~v~~p~~i~~i~~~~~~~~~~ 107 (523)
...||+|..+++++..... ..+++.++.++ ++||||++++ +|+.++++|++|+++++|+. +...|++
T Consensus 17 ~~~p~~~~~~~~~~~~~~~---~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~-~~~~fs~ 91 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYA---ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISR-HSDVFSS 91 (433)
T ss_dssp ---CCCCTTCCTTCHHHHT---TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHH-CTTTEES
T ss_pred cCCCCCCCCCCCCCHHHhh---cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHc-ChhhccC
Confidence 3567777777766554432 34689999999 7899999998 45578999999999999995 4567887
Q ss_pred CCCCCcccc-----cceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcC
Q 038386 108 RPKSTSIAD-----DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECR 182 (523)
Q Consensus 108 ~~~~~~~~~-----~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~ 182 (523)
++....... .......+.+++ ..+|+.|+++|++++ +.|++..++ .+.+.+.+.+.++++.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------ 160 (433)
T 3ivy_A 92 YENGVIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKIIS---RGFTPRAVG-RLHDELQERAQKIAAEAAA------ 160 (433)
T ss_dssp TTTCSCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHHG---GGSCHHHHH-TTHHHHHHHHHHHHHHHHH------
T ss_pred CcccccccccccccccccccccCCcc-ccChHHHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHHHhh------
Confidence 765432110 001111223454 459999999999999 999999999 9999999999999999874
Q ss_pred CCeeehhHHH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHH
Q 038386 183 GDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSRED 261 (523)
Q Consensus 183 ~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~ 261 (523)
++.+|+...+ ..+++++++.+ ||.+. +..+.+......+. ....|.+.. .+..+..+.+.+
T Consensus 161 ~~~~d~~~~~~~~~~~~vi~~l-~G~~~--~~~~~~~~~~~~~~--------~~~~p~~~~-------~~~~~~~~~~~~ 222 (433)
T 3ivy_A 161 AGSGDFVEQVSCELPLQAIAGL-LGVPQ--EDRGKLFHWSNEMT--------GNEDPEYAH-------IDPKASSAELIG 222 (433)
T ss_dssp HCEEEHHHHTTSHHHHHHHHHH-HTCCH--HHHHHHHHHHTTCS--------CCCCGGGTT-------CCHHHHHHHHHH
T ss_pred CCCeeHHHHHHHHHHHHHHHHH-cCCCH--HHHHHHHHHHHHHh--------ccCCchhhh-------HHHHHHHHHHHH
Confidence 4579998887 99999999996 99653 22222222221110 011222211 134456677888
Q ss_pred HHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHH
Q 038386 262 VFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQ 341 (523)
Q Consensus 262 ~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~ 341 (523)
++.++|+++++. ...|+++.|++... ++..+++++++.++..+++||+|||+.+++|++++|++||++|
T Consensus 223 ~~~~~i~~r~~~---------~~~dll~~ll~~~~--~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~ 291 (433)
T 3ivy_A 223 YAMKMAEEKAKN---------PADDIVTQLIQADI--DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQW 291 (433)
T ss_dssp HHHHHHHHC----------------CHHHHHSCC----CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhcC---------CCCcHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHH
Confidence 888888887653 34689999998653 4457999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCC
Q 038386 342 AKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDP 421 (523)
Q Consensus 342 ~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~ 421 (523)
+++++|++ +|||+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||
T Consensus 292 ~~l~~E~~---------------------~a~i~E~LRl~p~~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp 348 (433)
T 3ivy_A 292 ELYKKVRP---------------------ETAADEIVRWATPVTAF--QRTALRDYELSGVQIKKGQRVVMFYRSANFDE 348 (433)
T ss_dssp HHHHHHCC---------------------TTHHHHHHHHHCSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCT
T ss_pred HHHHhCcc---------------------cchhHHHhhhCcchhce--eeEECCCEEECCEEECCCCEEEEChhhhcCCc
Confidence 99999964 68999999999999876 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccC-CCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCC
Q 038386 422 NVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFG-AGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVD 499 (523)
Q Consensus 422 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~ 499 (523)
++|+||++|+|+||. ..++||| .|+|.|+|++||++|++++++.|+++|+ +++.++ +.
T Consensus 349 ~~f~dp~~F~p~R~~-------------------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~ 408 (433)
T 3ivy_A 349 EVFQDPFTFNILRNP-------------------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISA-PE 408 (433)
T ss_dssp TTSSSTTSCCTTCCS-------------------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC-CE
T ss_pred hhCCCcCccCCCCCC-------------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCC-Cc
Confidence 999999999999983 3489999 9999999999999999999999999999 998852 22
Q ss_pred cccccceEEeecCceeEEEeecC
Q 038386 500 LSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
+ ..+........++|++++|.
T Consensus 409 ~--~~~~~~~g~~~lpv~~~~R~ 429 (433)
T 3ivy_A 409 R--LRSGWLNGIKHWQVDYTGRC 429 (433)
T ss_dssp E--CCCSSBCCEEECEEESCC--
T ss_pred e--eccCcccCcceeEEEEeccc
Confidence 2 22334456668999999885
No 52
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=9.5e-60 Score=458.01 Aligned_cols=378 Identities=16% Similarity=0.186 Sum_probs=300.2
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc----cceeec--cccc-eee
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD----DLIFAN--KRRG-IST 129 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~-i~~ 129 (523)
..+++.++.+|+ +||+|+++++ |+.++|+|+||+.+++++.+ ..|++++....+.. ..++.. ++.+ +++
T Consensus 21 ~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (413)
T 2z36_A 21 PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLAD--GRFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG 97 (413)
T ss_dssp TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHC--TTEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcC--CCcccCccccCccccccccccccccccccccccc
Confidence 357889999997 7899999998 88999999999999999965 35777664321110 011100 1235 444
Q ss_pred CcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCC
Q 038386 130 YPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNN 208 (523)
Q Consensus 130 ~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~ 208 (523)
.+|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.+. .++++|+...+ ..+++++++. +||.+
T Consensus 98 -~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~ 167 (413)
T 2z36_A 98 -MDGAEHSAARRPVI---GEFTVKRLA-ALRPRIQDIVDHFIDDMLAT----DQRPVDLVQALSLPVPSLVICE-LLGVP 167 (413)
T ss_dssp -CCHHHHHHHHHHHH---GGGSHHHHH-HHHHHHHHHHHHHHHHHTTC----SCSSEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred -cCchHHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHHHHHh----cCCCccHHHHHhhhhHHHHHHH-HhCCC
Confidence 48999999999999 999999999 99999999999999998641 26689998665 4689999998 49988
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchH
Q 038386 209 VEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYV 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l 288 (523)
.++. +.+...... .+.... . ++..+..+.+.+++.++|+++++. ...|++
T Consensus 168 ~~~~--~~~~~~~~~------------~~~~~~----~---~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll 217 (413)
T 2z36_A 168 YTDH--DFFQSRTTM------------MVSRTS----M---EDRRRAFAELRAYIDDLITRKESE---------PGDDLF 217 (413)
T ss_dssp GGGH--HHHHHHHHH------------TTCSSC----H---HHHHHHHHHHHHHHHHHHHHHHSS---------CCSSHH
T ss_pred HHHH--HHHHHHHHH------------HhcccC----c---HHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHH
Confidence 7432 222222111 111111 1 445566777888888888877642 346899
Q ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCCh
Q 038386 289 DTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMP 368 (523)
Q Consensus 289 ~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp 368 (523)
+.|++... ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 218 ~~ll~~~~--~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------- 276 (413)
T 2z36_A 218 SRQIARQR--QEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG------------------- 276 (413)
T ss_dssp HHHHHHHH--HHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------------
T ss_pred HHHHHhhc--CCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH-------------------
Confidence 99998642 234699999999999999999999999999999999999999999999852
Q ss_pred hHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCc
Q 038386 369 YLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNL 448 (523)
Q Consensus 369 ~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 448 (523)
||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 277 ~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------ 343 (413)
T 2z36_A 277 RTPMAVEELLRYFTIADGV-TSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA------------ 343 (413)
T ss_dssp GHHHHHHHHHHHHCTTTTC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC------------
T ss_pred HHHHHHHHHHHhCCCcccc-eeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC------------
Confidence 7999999999999999955 599999999999999999999999999999999999999999999973
Q ss_pred cccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEe
Q 038386 449 DITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARIS 519 (523)
Q Consensus 449 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+........++|+++
T Consensus 344 -------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~ 408 (413)
T 2z36_A 344 -------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWH 408 (413)
T ss_dssp -------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred -------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEee
Confidence 2389999999999999999999999999999999 589876322322333445567778888765
No 53
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=1.3e-59 Score=456.65 Aligned_cols=376 Identities=18% Similarity=0.208 Sum_probs=302.5
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCC--C----ccccccee-ec----cccc
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKS--T----SIADDLIF-AN----KRRG 126 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--~----~~~~~~~~-~~----~~~~ 126 (523)
..+++.++.++ ++||+||++++++.++++|++|+.+++++.++ .|++++.. . .+.....+ .. .+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 34788999999 99999999999999999999999999999765 67777653 1 11000011 11 1235
Q ss_pred eeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhc
Q 038386 127 ISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCF 205 (523)
Q Consensus 127 i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~f 205 (523)
+++ .+|+.|+++|+++. ++|++..++ .+.+.+.+.++++++.+.. ++++|+...+ ..+++++++. +|
T Consensus 90 l~~-~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~vi~~-~~ 157 (404)
T 1z8o_A 90 MGT-SDPPTHTRLRKLVS---QEFTVRRVE-AMRPRVEQITAELLDEVGD------SGVVDIVDRFAHPLPIKVICE-LL 157 (404)
T ss_dssp GGG-CCTTHHHHHHHHHH---TTSCHHHHH-HTHHHHHHHHHHHHHTSCS------SSEEEHHHHTTTHHHHHHHHH-HT
T ss_pred ccc-CCCcHHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHhhhh------cCCcchHHHHhHHHHHHHHHH-Hh
Confidence 544 48999999999999 999999999 9999999999999988753 5689998755 6899999998 49
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCcc
Q 038386 206 GNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSE 285 (523)
Q Consensus 206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 285 (523)
|.+.++. +.+......+.. . ..| . .++..+..+.+.+++.++|+++++. ...
T Consensus 158 G~~~~~~--~~~~~~~~~~~~----~----~~p-------~--~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~ 209 (404)
T 1z8o_A 158 GVDEKYR--GEFGRWSSEILV----M----DPE-------R--AEQRGQAAREVVNFILDLVERRRTE---------PGD 209 (404)
T ss_dssp TCCGGGT--TTHHHHHHHHHC----C----CGG-------G--HHHHHHHHHHHHHHHHHHHHHHHHS---------CCS
T ss_pred CCCHHHH--HHHHHHHHHHhc----c----CCh-------h--HHHHHHHHHHHHHHHHHHHHHHHhC---------CCC
Confidence 9877432 223222222111 0 001 1 3456667788888899998887653 346
Q ss_pred chHHHHHHh-hCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccc
Q 038386 286 SYVDTLIEL-RLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDL 364 (523)
Q Consensus 286 d~l~~ll~~-~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 364 (523)
|+++.|++. .. ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|+.
T Consensus 210 dll~~ll~~~~~--~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 272 (404)
T 1z8o_A 210 DLLSALIRVQDD--DDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS--------------- 272 (404)
T ss_dssp SHHHHHHHCEET--TTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------
T ss_pred CHHHHHHhhhcc--cCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------
Confidence 899999987 42 344699999999999999999999999999999999999999999999842
Q ss_pred cCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCC
Q 038386 365 VKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGG 444 (523)
Q Consensus 365 ~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~ 444 (523)
||+|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 273 ----~l~a~i~E~lRl~p~~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~-------- 338 (404)
T 1z8o_A 273 ----ALPNAVEEILRYIAPPET--TTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-------- 338 (404)
T ss_dssp ----GHHHHHHHHHHHTCSSCC--EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC--------
T ss_pred ----hHHHHHHHHHHhcCCccC--cceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC--------
Confidence 799999999999999994 599999999999999999999999999999999999999999999973
Q ss_pred CCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEE
Q 038386 445 KNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 445 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+.++..+++|++
T Consensus 339 -----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 339 -----------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 402 (404)
T ss_dssp -----------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred -----------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence 2489999999999999999999999999999999 59987622223333455667888888876
No 54
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=3.4e-60 Score=461.20 Aligned_cols=382 Identities=19% Similarity=0.244 Sum_probs=304.1
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCC-CCCc-----cccc-ceeec-c-ccce
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRP-KSTS-----IADD-LIFAN-K-RRGI 127 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~~-----~~~~-~~~~~-~-~~~i 127 (523)
..+++.++.++ ++||+|+++++ ++.++|+|+||+++++|+.++ .+++++ .... .... .+++. . ..++
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDP--RLVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCT--TEECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCC--ccccCcccccccccccCCcccchhhhhcccccc
Confidence 45788899999 99999999998 889999999999999999654 244443 1110 0000 01110 1 2344
Q ss_pred eeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHH-HHHHHHhhhhhcc
Q 038386 128 STYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFR-YAIFYLLVKMCFG 206 (523)
Q Consensus 128 ~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~-~~~~~v~~~~~fG 206 (523)
+ ..+|+.|+++|+++. ++|++..++ .+.+.+.+.++++++.+.+ .++++|+.+.+. .+++++++. +||
T Consensus 93 ~-~~~g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G 161 (411)
T 1gwi_A 93 L-TVDGAEHRRLRTLVA---QALTVRRVE-HMRGRITELTDRLLDELPA-----DGGVVDLKAAFAYPLPMYVVAD-LMG 161 (411)
T ss_dssp G-GCCHHHHHHHHHHHT---TTSCHHHHH-TTHHHHHHHHHHHHHTSCC-----SCCCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred c-cCCcHHHHHHHHHHH---HhcCHHHHH-HHHHHHHHHHHHHHHHHHH-----cCCCcchHHHHhhHHHHHHHHH-HhC
Confidence 4 458999999999999 999999999 9999999999999998863 267899998876 599999996 799
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccc
Q 038386 207 NNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSES 286 (523)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 286 (523)
.+.++ .+.+......++.. .. . .++..+..+.+.+++.++|+++++. ...|
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~-----------~~----~---~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d 212 (411)
T 1gwi_A 162 IEEAR--LPRLKVLFEKFFST-----------QT----P---PEEVVATLTELASIMTDTVAAKRAA---------PGDD 212 (411)
T ss_dssp CCGGG--HHHHHHHHHHHHCT-----------TS----C---HHHHHHHHHHHHHHHHHHHHHHHHS---------CCSS
T ss_pred CCHHH--HHHHHHHHHHHhcc-----------CC----C---hHHHHHHHHHHHHHHHHHHHHHHhC---------CCCC
Confidence 88643 22333332222110 00 0 1345567777888888888887653 3468
Q ss_pred hHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccC
Q 038386 287 YVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVK 366 (523)
Q Consensus 287 ~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~ 366 (523)
+++.|++... ++..++++++++++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus 213 ~l~~ll~~~~--~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------ 272 (411)
T 1gwi_A 213 LTSALIQASE--NGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------ 272 (411)
T ss_dssp HHHHHHHCCB--TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------
T ss_pred HHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------
Confidence 9999998753 34569999999999999999999999999999999999999999999863
Q ss_pred ChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCC-CCCCCCCCCcccccCCCCCCC
Q 038386 367 MPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVW-EDPLEFKPERFLYCDDKNGGK 445 (523)
Q Consensus 367 lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~~~~~~ 445 (523)
+||+|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||..
T Consensus 273 -~~l~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~-------- 342 (411)
T 1gwi_A 273 -AEWSAVVEETLRFSTPTSHV-LIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG-------- 342 (411)
T ss_dssp -SCHHHHHHHHHHHSCSBCCE-EEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--------
T ss_pred -HHHHHHHHHHHHhCCcccCC-ceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--------
Confidence 37999999999999999965 599999999999999999999999999999999999 9999999999952
Q ss_pred CCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 446 NNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 446 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++..+..++....+.+..+..+++|++++|+
T Consensus 343 ----------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~ 410 (411)
T 1gwi_A 343 ----------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH 410 (411)
T ss_dssp ----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred ----------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence 3589999999999999999999999999999999 799875222333333455678899999999996
No 55
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=2.2e-60 Score=474.17 Aligned_cols=427 Identities=15% Similarity=0.129 Sum_probs=298.3
Q ss_pred CCCCCCCCCCCccceeeecccccC--CCC-CccHHHHHHHhhcCC-eEEEEeCCE-------eEEEecCHHHHHHHHHhC
Q 038386 33 ISTQNLPPGPPRFHLLAHLLWHRK--PLF-QLGPIISTLRLKYGP-IITVRMGSE-------PSIYICNNTLAHQALINN 101 (523)
Q Consensus 33 ~~~~~~ppgp~~~p~~G~~~~~~~--~~~-~~~~~~~~~~~kyG~-i~~~~~~~~-------~~v~v~~p~~i~~i~~~~ 101 (523)
..+++.||||+++|++|+++++.. ... +++.++.++++|||+ ||++++++. ..|++.+.+..+.++.
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~-- 82 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFD-- 82 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGC--
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecC--
Confidence 345678999999999999988642 134 788999999999999 999998643 3344455554444441
Q ss_pred CcccccCCCCCccc--ccceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhh
Q 038386 102 GTVFADRPKSTSIA--DDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYC 179 (523)
Q Consensus 102 ~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~ 179 (523)
...+.+........ ...+++......++..+|+.|+++|+++. +.|++. ++ .+.+.+++.+.++++.|.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~---~~f~~~-~~-~~~~~i~~~~~~ll~~~~~~~~ 157 (473)
T 3dan_A 83 VSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLF---FMLKNS-SN-RVIPQFETTYTELFEGLEAELA 157 (473)
T ss_dssp TTTEECSSCTTSSSCCCGGGGTTSCCGGGCCTTSHHHHHHHHHHH---HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceeccccccccccCCccccCCCcceeeeCCCcHHHHHHHHHHH---HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 11122111111000 00233322223344558999999999999 999994 88 9999999999999999987544
Q ss_pred hcCCCeeehhHHHHHHHHHHhhhhhccCCcchhHH-HHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHH-HHhHH
Q 038386 180 ECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQEI-RELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKF-LGIIR 257 (523)
Q Consensus 180 ~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~-~~~~~ 257 (523)
+++++|+.+++..+++++++.++||.+++.... +.+......+. ....+|.+...++. ..... .+..+
T Consensus 158 --~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~~~~p~~~~~lp~-~~~~~~~~~~~ 227 (473)
T 3dan_A 158 --KNGKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWV-------LFNLAPTLDLGLPW-FLQEPLLHTFR 227 (473)
T ss_dssp --HHSCEECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHH-------HHHHGGGCCCSCCH-HHHHHHHSSSC
T ss_pred --cCCcccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHH-------HHhccchhhhcchH-HHHHHHhhhcc
Confidence 356899999999999999999999998854211 11111211111 11223432211110 00100 00000
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHH-hhcccchHHHHHHHHHHHHh
Q 038386 258 SREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFI-SHGSDTIATALHWVMANVVK 336 (523)
Q Consensus 258 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~ 336 (523)
.... .+.+..+... + .-.|+++.+++.. ++..+++++++.+++.++ ++|++||+.+++|++++|++
T Consensus 228 ~~~~----~~~~~~~~~~--~----~~~~~~~~ll~~~---~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~ 294 (473)
T 3dan_A 228 LPAF----LIKSTYNKLY--D----YFQSVATPVMEQA---EKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGL 294 (473)
T ss_dssp CCGG----GTHHHHHHHH--H----HHHHHCHHHHHHH---HHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred chHh----hhhhchhhhH--H----HHHHHHHHHHHhH---hhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHh
Confidence 0000 0000000000 0 1125566666654 346699999998886666 88889999999999999999
Q ss_pred -CcHHHHHHHHHHHHhhhc-CCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCcee----CCEEeCCCCEE
Q 038386 337 -YPKIQAKILDEINGVVEQ-GQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVEL----GGYLVTKGISV 410 (523)
Q Consensus 337 -~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~v 410 (523)
||++|++||+|++++++. .+..++.+++++||||+|||+|+||++|+++.. .|.+.+|+++ +||.||||+.|
T Consensus 295 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~--~r~~~~d~~l~~~~~g~~Ip~G~~v 372 (473)
T 3dan_A 295 AGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQ--YGKAKSNFTIESHDATFEVKKGEML 372 (473)
T ss_dssp HCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEEECSSCEEEECTTCEE
T ss_pred cCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccc--cccccCCcEeecCCCceEeCCCCEE
Confidence 899999999999999887 657899999999999999999999999999987 5779999999 99999999999
Q ss_pred eeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcE
Q 038386 411 NFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFE 490 (523)
Q Consensus 411 ~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~ 490 (523)
.++.+++||||++|+||++|||+||++.+..... ...-.....+++||+|+|.|+|++||.+|+++++++|+++|+
T Consensus 373 ~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~~~~~----~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~ 448 (473)
T 3dan_A 373 FGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLK----YVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD 448 (473)
T ss_dssp EEEHHHHTTCTTTSSSTTSCCTTTTSGGGGGGGG----GCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred EechHHhhCCchhcCCcccCCccccCCCcccccc----cceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999976210000 000001123455555559999999999999999999999999
Q ss_pred eEecC
Q 038386 491 WNKAD 495 (523)
Q Consensus 491 ~~~~~ 495 (523)
+...+
T Consensus 449 ~~~~~ 453 (473)
T 3dan_A 449 SFEIE 453 (473)
T ss_dssp EEEEE
T ss_pred eEEcc
Confidence 76554
No 56
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=2.6e-59 Score=456.48 Aligned_cols=354 Identities=15% Similarity=0.168 Sum_probs=291.6
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeC-CEeEEEecCHHHHHHHHHhCCcccccCCCCCcccc-ccee---eccccceeeCcC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMG-SEPSIYICNNTLAHQALINNGTVFADRPKSTSIAD-DLIF---ANKRRGISTYPY 132 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~-~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~~~~ 132 (523)
..+++.++.+|+++ |+||+++++ |.++|+|++|+++++++.++ .|++++....+.. .... +..+.+++. .+
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~d 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIR-TD 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGG-CC
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhh-cC
Confidence 45889999999998 999999987 58899999999999999655 6777543221110 0100 012234444 48
Q ss_pred CchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcch
Q 038386 133 GTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEE 211 (523)
Q Consensus 133 g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~ 211 (523)
|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.+. ++++|+.+.+ ..++.++++.+ ||.+.++
T Consensus 104 g~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~-----g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 173 (417)
T 3tyw_A 104 APEHTRYRRMLL---PAFTVRRVR-AMRPAVQARVDEILDGMLAA-----GGPVDLVSAYANAVSTSVICEL-LGIPRHD 173 (417)
T ss_dssp HHHHHHHHHHHG---GGGCHHHHH-HTHHHHHHHHHHHHHHHHHH-----CSSEEHHHHTHHHHHHHHHHHH-HTCCTTT
T ss_pred CcHHHHHHHHHH---hhhCHHHHH-HHHHHHHHHHHHHHHHHHhh-----CCCcchHHHHHHHHHHHHHHHH-hCCCHHH
Confidence 999999999999 999999999 99999999999999999862 6789999987 57889999987 9998853
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHH
Q 038386 212 QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~l 291 (523)
. +.+......+. ...+. .++..+..+.+.+++.++|+++++. ...|+++.+
T Consensus 174 ~--~~~~~~~~~~~---------~~~~~---------~~~~~~~~~~l~~~~~~~i~~r~~~---------~~~d~l~~l 224 (417)
T 3tyw_A 174 L--EFFRDVTRISG---------SRNST---------AEQVSEALGGLFGLLGGLVAERREE---------PRDDLISKL 224 (417)
T ss_dssp T--THHHHHHHHHH---------SSSSC---------TTHHHHHHHHHHHHHHHHHHHHHSS---------CCSSHHHHH
T ss_pred H--HHHHHHHHHHh---------cccCC---------HHHHHHHHHHHHHHHHHHHHHHhhC---------CCCCHHHHH
Confidence 2 12222222111 11111 1345566777888888888877652 457999999
Q ss_pred HHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHH
Q 038386 292 IELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLK 371 (523)
Q Consensus 292 l~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~ 371 (523)
++... +++.+++++++.++..+++||+|||+.+++|++++|++||++|++|++|++ ||+
T Consensus 225 l~~~~--~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~ 283 (417)
T 3tyw_A 225 VTDHL--VPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD-------------------LMP 283 (417)
T ss_dssp HHHTT--TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG-------------------GHH
T ss_pred HHhcc--cCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-------------------HHH
Confidence 98764 334699999999999999999999999999999999999999999999853 799
Q ss_pred HHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccc
Q 038386 372 AVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDIT 451 (523)
Q Consensus 372 a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~ 451 (523)
|||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 284 a~i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------------- 347 (417)
T 3tyw_A 284 AAVDELLRVLSVADSI-PLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD--------------- 347 (417)
T ss_dssp HHHHHHHHHHCSCTTC-CEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC---------------
T ss_pred HHHHHHHHhccccccC-ceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC---------------
Confidence 9999999999999975 689999999999999999999999999999999999999999999983
Q ss_pred ccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecC
Q 038386 452 RNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKAD 495 (523)
Q Consensus 452 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~ 495 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++..
T Consensus 348 ----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~ 388 (417)
T 3tyw_A 348 ----NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAG 388 (417)
T ss_dssp ----CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred ----CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccC
Confidence 3489999999999999999999999999999999 999985
No 57
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=4.5e-59 Score=456.07 Aligned_cols=379 Identities=16% Similarity=0.186 Sum_probs=306.1
Q ss_pred CCccHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHHhCCcccccCCCC--Ccccccceeeccccceee
Q 038386 59 FQLGPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALINNGTVFADRPKS--TSIADDLIFANKRRGIST 129 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~ 129 (523)
.+++.++.+|+ +||+||+++++ +.++|+|+||+.+++|+.++ +.|++++.. .... ..++..+.++++
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~--~~~~~~~~~l~~ 119 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQT--PELAEYFGSMIV 119 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCC--HHHHHHHHGGGG
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccc--cchhhhcccccc
Confidence 46788999996 69999998886 66799999999999999764 568887642 1111 111111235555
Q ss_pred CcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCC
Q 038386 130 YPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNN 208 (523)
Q Consensus 130 ~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~ 208 (523)
. +|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.+.. +++++|+.+.+ ..+++++++.+ ||.+
T Consensus 120 ~-dg~~h~~~R~~l~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~~~---~~~~vd~~~~~~~~~~~~vi~~~-~G~~ 190 (435)
T 2wm5_A 120 L-DDPRHQRLRSIVS---RAFTPKVVA-RIEAAVRDRAHRLVSSMIANN---PDRQADLVSELAGPLPLQIICDM-MGIP 190 (435)
T ss_dssp C-CTTHHHHHHHHHH---HTCCHHHHH-HHHHHHHHHHHHHHHHHHHHC---TTSEEEHHHHTTTHHHHHHHHHH-HTCC
T ss_pred C-CcHHHHHHHHHhH---HhhCHHHHH-HHHHHHHHHHHHHHHHHHhcC---CCCcEehHHHHHHHHHHHHHHHH-cCCC
Confidence 4 8999999999999 999999999 999999999999999998642 24589999766 78999999999 9998
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchH
Q 038386 209 VEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYV 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l 288 (523)
+++. +.+......+... ..|.+.. .+++..+..+.+.+++.++|+++++. ...|++
T Consensus 191 ~~~~--~~~~~~~~~~~~~--------~~p~~~~-----~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll 246 (435)
T 2wm5_A 191 KADH--QRIFHWTNVILGF--------GDPDLAT-----DFDEFMQVSADIGAYATALAEDRRVN---------HHDDLT 246 (435)
T ss_dssp GGGH--HHHHHHHHHHHHT--------TCTTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHH
T ss_pred HHHH--HHHHHHHHHHhcc--------CCcchhh-----hHHHHHHHHHHHHHHHHHHHHHHhcC---------CCCCHH
Confidence 7532 3344433333221 1243321 12456667788888999999887762 346899
Q ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCCh
Q 038386 289 DTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMP 368 (523)
Q Consensus 289 ~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp 368 (523)
+.|++... ++..+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++ +
T Consensus 247 ~~ll~~~~--~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~ 306 (435)
T 2wm5_A 247 SSLVEAEV--DGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD------------------G 306 (435)
T ss_dssp HHHHHCCB--TTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH------------------H
T ss_pred HHHHhhhc--cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH------------------h
Confidence 99998753 345699999999999999999999999999999999999999999999976 3
Q ss_pred hHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCc
Q 038386 369 YLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNL 448 (523)
Q Consensus 369 ~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 448 (523)
||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+|+ +
T Consensus 307 ~l~a~i~E~lRl~p~~~~--~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~---------- 372 (435)
T 2wm5_A 307 LAPTAVEEIVRWASPVVY--MRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P---------- 372 (435)
T ss_dssp HHHHHHHHHHHHHCSBCC--EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S----------
T ss_pred HHHHHHHHHHhhcCcccC--cceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C----------
Confidence 899999999999999994 59999999999999999999999999999999999999999999993 1
Q ss_pred cccccCcccccccCC-CCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCcccccceEEeecCceeEEE
Q 038386 449 DITRNREIKMMPFGA-GRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 449 ~~~~~~~~~~~~Fg~-G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
..++|||. |+|.|+|++||++|++++++.|+++|+ +++.+ ++.+ ..+....+...++|++
T Consensus 373 -------~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~-~~~~--~~~~~~~~~~~lpv~~ 434 (435)
T 2wm5_A 373 -------NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATE-EPAR--LLSQFIHGIKTLPVTW 434 (435)
T ss_dssp -------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS-CCEE--CCCSSBCCEEECEEEC
T ss_pred -------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC-Cccc--cccccccCccceeEEe
Confidence 35899999 999999999999999999999999997 99875 3233 2334456666777765
No 58
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=6.9e-60 Score=460.78 Aligned_cols=382 Identities=15% Similarity=0.129 Sum_probs=297.7
Q ss_pred CCccHHHHHHHhhcCCeEEEEeC--CEeEEEecCHHHHHHHHHhCCcccccCCCC--------Ccccc--cceee-cccc
Q 038386 59 FQLGPIISTLRLKYGPIITVRMG--SEPSIYICNNTLAHQALINNGTVFADRPKS--------TSIAD--DLIFA-NKRR 125 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG~i~~~~~~--~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--------~~~~~--~~~~~-~~~~ 125 (523)
.+++.++.++++ ||+|+++++| +.++++|+||+.+++|+.++ .|++++.. ..... ...+. ..+.
T Consensus 20 ~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 467889999864 9999999987 67899999999999999654 68877642 11000 00011 1123
Q ss_pred ceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH-HHHHHHHHhhhhh
Q 038386 126 GISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH-FRYAIFYLLVKMC 204 (523)
Q Consensus 126 ~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~-~~~~~~~v~~~~~ 204 (523)
++++. +|+.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.. .+++|+... ...+++++++.+
T Consensus 97 ~l~~~-dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------~g~~dl~~~~~~~~~~~vi~~~- 164 (425)
T 2z3t_A 97 WLVFL-DPPHHTELRSLLT---TEFSPSIVT-GLRPRIAELASALLDRLRA------QRRPDLVEGFAAPLPILVISAL- 164 (425)
T ss_dssp CGGGC-CHHHHHHHHHHHH---GGGSHHHHH-HHHHHHHHHHHHHHHHHTT------SSSCBHHHHTTTHHHHHHHHHH-
T ss_pred ccccC-CchHHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHHHHh------cCCccHHHHHHHHHHHHHHHHH-
Confidence 55554 8999999999999 999999999 9999999999999999864 237899875 478999999998
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCc
Q 038386 205 FGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDS 284 (523)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 284 (523)
||.+.++. +.+......+... ...+|. ....+++..+..+.+.+++.++|+++++. ..
T Consensus 165 ~G~~~~~~--~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~ 222 (425)
T 2z3t_A 165 LGIPEEDH--TWLRANAVALQEA------STTRAR-----DGRGYARAEAASQEFTRYFRREVDRRGGD---------DR 222 (425)
T ss_dssp HTCCGGGH--HHHHHHHHHHHTT------CTTCCC--------HHHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred hCCCHHHH--HHHHHHHHHHHhh------ccccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CC
Confidence 99887532 2333333222211 111221 11223556677788888888888877653 34
Q ss_pred cchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccc
Q 038386 285 ESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDL 364 (523)
Q Consensus 285 ~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 364 (523)
.|+++.|++... ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 223 ~dll~~ll~~~~--~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 285 (425)
T 2z3t_A 223 DDLLTLLVRARD--TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE--------------- 285 (425)
T ss_dssp -CHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------
T ss_pred CCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------
Confidence 689999998763 245699999999999999999999999999999999999999999999853
Q ss_pred cCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCC
Q 038386 365 VKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGG 444 (523)
Q Consensus 365 ~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~ 444 (523)
||+|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 286 ----~l~a~i~E~lRl~p~~~~--~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------- 351 (425)
T 2z3t_A 286 ----STPAAVEELMRYDPPVQA--VTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA-------- 351 (425)
T ss_dssp ----GHHHHHHHHHHHSCSBCE--EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS--------
T ss_pred ----hHHHHHHHHHHhCCcccC--cceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC--------
Confidence 899999999999999994 599999999999999999999999999999999999999999999995
Q ss_pred CCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeec
Q 038386 445 KNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPR 521 (523)
Q Consensus 445 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 521 (523)
..++|||.|+|.|+|++||++|++++++.|+++| +++ .++..+ ....+.+..+..+++|++++.
T Consensus 352 -----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~-~~~~~~~~~~~~~lpv~~~~~ 416 (425)
T 2z3t_A 352 -----------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEV-EYADDMVFHGPTRLLLDLPDA 416 (425)
T ss_dssp -----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEE-EECSCSSBCCEEEEEECCC--
T ss_pred -----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcc-ccccccccCCcceeeEEecch
Confidence 2389999999999999999999999999999999 899 652111 223345567788888888764
No 59
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=8.5e-59 Score=449.21 Aligned_cols=367 Identities=18% Similarity=0.190 Sum_probs=296.6
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCCCCc-ccccceeeccccc--eeeCcCC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPKSTS-IADDLIFANKRRG--ISTYPYG 133 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--i~~~~~g 133 (523)
..+++.++.++ ++||+|+++++ ++.+.|+|+||+.+++|+.++ .|.+++.... +. .... +.+ +++ .+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~--~~~~--~~~~~l~~-~~g 96 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAA--QYVR--SPFLDLLI-SDA 96 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSC--CSSC--CHHHHTTC-BCS
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCC--cccc--ccccccee-eCC
Confidence 34688999999 89999999997 789999999999999999653 4766655421 11 2111 123 444 489
Q ss_pred ------chhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhcc
Q 038386 134 ------TTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFG 206 (523)
Q Consensus 134 ------~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG 206 (523)
+.|+++|+++. +.|++..++ .+.+.+.+.+.++++.+.. +++++|+...+ ..+++++++. +||
T Consensus 97 ~~~~~~~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~-----~g~~~d~~~~~~~~~~~~vi~~-~~G 166 (404)
T 2xbk_A 97 DAESGRRQHAETRRLLT---PLFSARRVL-EMQPKVEEAADTLLDAFIA-----QGPPGDLHGELTVPFALTVLCE-VIG 166 (404)
T ss_dssp CHHHHHHHHHHHHHHHG---GGGCHHHHH-HHHHHHHHHHHHHHHHHHH-----TCSSEEHHHHTHHHHHHHHHHH-HHT
T ss_pred CCCCCCchHHHHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCeeHHHHHHHHHHHHHHHH-HhC
Confidence 99999999999 999999999 9999999999999999974 36689998766 5689999997 799
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccc
Q 038386 207 NNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSES 286 (523)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 286 (523)
.+.++. +.+......+.. ... .. +..++.+.+.+++.++|+++++. ...|
T Consensus 167 ~~~~~~--~~~~~~~~~~~~------------~~~----~p---~~~~~~~~~~~~~~~~i~~r~~~---------~~~d 216 (404)
T 2xbk_A 167 VPPQRR--AELTTLLAGIAK------------LDD----RE---GAVRAQDDLFGYVAGLVEHKRAE---------PGPD 216 (404)
T ss_dssp CCGGGH--HHHHHHHHHHTB------------SSC----HH---HHHHHHHHHHHHHHHHHHHHHHS---------CCSS
T ss_pred CCHHHH--HHHHHHHHHHHh------------ccC----cH---HHHHHHHHHHHHHHHHHHHHHhC---------CCCC
Confidence 887432 223222221111 000 01 34556777888888888887653 3358
Q ss_pred hHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccC
Q 038386 287 YVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVK 366 (523)
Q Consensus 287 ~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~ 366 (523)
+++.| + ++ .+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++
T Consensus 217 ll~~l-~-----~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------- 272 (404)
T 2xbk_A 217 IISRL-N-----DG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD----------------- 272 (404)
T ss_dssp HHHHH-H-----SS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-----------------
T ss_pred HHHHh-h-----cC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------
Confidence 99988 2 33 799999999999999999999999999999999999999999999964
Q ss_pred ChhHHHHHHhhhcCCCCCC-CCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCC
Q 038386 367 MPYLKAVILEGLRRHPPVY-LLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGK 445 (523)
Q Consensus 367 lp~L~a~i~E~lRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~ 445 (523)
||+|||+|+||++|+++ .. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 273 --~l~a~i~E~lRl~p~~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--------- 340 (404)
T 2xbk_A 273 --VMARAVEEVLRTARAGGSVL-PPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP--------- 340 (404)
T ss_dssp --HHHHHHHHHHHHSCSSCCBC-SCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS---------
T ss_pred --HHHHHHHHHHHhCCCccccc-cceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC---------
Confidence 79999999999999999 44 599999999999999999999999999999999999999999999983
Q ss_pred CCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEE
Q 038386 446 NNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 446 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++....+.+..+...++|++
T Consensus 341 ----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 404 (404)
T 2xbk_A 341 ----------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW 404 (404)
T ss_dssp ----------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred ----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence 3489999999999999999999999999999999 79987632233333455567778887763
No 60
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=9.8e-59 Score=448.19 Aligned_cols=368 Identities=16% Similarity=0.128 Sum_probs=299.8
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCC----EeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGS----EPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYG 133 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~----~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g 133 (523)
..+++.++.+++ +||||+++++++ .++|+|+||+.+++|+ ++...|++++...... . .... .+.++..+|
T Consensus 11 ~~~p~~~~~~lr-~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~--~-~~~~-~~~~~~~~g 84 (384)
T 3oo3_A 11 RLDPVPEFEELQ-KAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEA--D-RALL-PGILQAYDP 84 (384)
T ss_dssp TTEECHHHHHHH-HTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC--------CCC-TTCGGGCCT
T ss_pred ccChhHHHHHHH-hcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccc--c-cccc-ccccccCCC
Confidence 457899999994 999999999886 8999999999999999 5667888887764321 1 1112 233445599
Q ss_pred chhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcchhH
Q 038386 134 TTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 134 ~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~ 213 (523)
+.|+++|+.++ ++|++..++ .+.+.+.+.++++++.+.+ .++++|+.+++...+.+.+...+||.+.++.
T Consensus 85 ~~~~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~- 154 (384)
T 3oo3_A 85 PDHTRLRRTVA---PAYSARRME-RLRPRIEEIVEECLDDFES-----VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ- 154 (384)
T ss_dssp THHHHHHHHHG---GGGCHHHHH-HHHHHHHHHHHHHHHHHHH-----SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-
T ss_pred hhHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-
Confidence 99999999999 999999999 9999999999999999976 3678999999998887888888999887432
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
+.+......+.. .+ ..++..+..+.+.+++.++|+++++. ...|+++.+++
T Consensus 155 -~~~~~~~~~~~~----------~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~d~l~~ll~ 205 (384)
T 3oo3_A 155 -AELSRMIRESRE----------SR---------LPRQRTLSGLGIVNYTKRLTSGKRRD---------PGDGMIGVIVR 205 (384)
T ss_dssp -HHHHHHHHHHHH----------CS---------CHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHH
T ss_pred -HHHHHHHHHHhc----------cC---------ChHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHH
Confidence 333333332221 01 12445567778888888888877642 45699999998
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
. .+..++++++..++..+++||+|||+++++|++++|++||++|+++++|++. |+||
T Consensus 206 ~----~~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-------------------l~a~ 262 (384)
T 3oo3_A 206 E----HGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-------------------IDSA 262 (384)
T ss_dssp H----HGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-------------------HHHH
T ss_pred h----cCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-------------------HHHH
Confidence 6 2356999999999999999999999999999999999999999999999763 8999
Q ss_pred HHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccccc
Q 038386 374 ILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRN 453 (523)
Q Consensus 374 i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~ 453 (523)
|+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++|| +||++|+|+||.
T Consensus 263 i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~----------------- 319 (384)
T 3oo3_A 263 TEEVLRHASIVEAP-APRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK----------------- 319 (384)
T ss_dssp HHHHHHHHCSCSCC-SCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC-----------------
T ss_pred HHHHHHhCCcccCC-cceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC-----------------
Confidence 99999999999875 6999999999999999999999999999999 999999999942
Q ss_pred CcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCccccc-ceEEeecCceeEEE
Q 038386 454 REIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKA-EFTIEMKNPLHARI 518 (523)
Q Consensus 454 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 518 (523)
..|+|||.|+|.|+|++||++|++++++.|+++| ++++.+++.++.... +.+..+...++|++
T Consensus 320 --~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~~ 384 (384)
T 3oo3_A 320 --ATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLEW 384 (384)
T ss_dssp --CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred --CCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeeeC
Confidence 4699999999999999999999999999999999 999986332333333 44556777777763
No 61
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.1e-58 Score=455.79 Aligned_cols=385 Identities=16% Similarity=0.184 Sum_probs=302.9
Q ss_pred ccHHHHHHHhhcCCeE--EEE-eCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceee---------c---ccc
Q 038386 61 LGPIISTLRLKYGPII--TVR-MGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFA---------N---KRR 125 (523)
Q Consensus 61 ~~~~~~~~~~kyG~i~--~~~-~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~ 125 (523)
++.++.++ ++||||+ +++ +|+.++++|++++++++++++ ...|++++...... ...+ . ...
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~-~~~fs~~~~~~~~~--~~~~~~~~~~~~gg~~~~~~ 122 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKD-NATFLNNPKSTVFT--LRVGEMMAKAITGGSPHLVE 122 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHC-TTTEESSSSCSSCC--CHHHHHHHHHHHTSCSCSSC
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhC-cccccCCCcccccc--cccccccccccccccccccc
Confidence 78889888 6799999 888 788899999999999999954 47788877654321 1100 0 112
Q ss_pred ceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhh
Q 038386 126 GISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMC 204 (523)
Q Consensus 126 ~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~ 204 (523)
+++ ..+|+.|+++|++++ ++|++..++ .+.+.+.+.++++++.+.+ .++++|+...+ ..+++++++.+
T Consensus 123 ~l~-~~dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~-----~~~~~dl~~~~~~~~~~~vi~~l- 191 (450)
T 3tkt_A 123 SLV-QMDAPKHPKLRRLTQ---DWFMPKNLA-RLDGEIRKIANEAIDRMLG-----AGEEGDFMALVAAPYPLHVVMQI- 191 (450)
T ss_dssp CGG-GCCTTHHHHHHHHHH---TTTSHHHHG-GGHHHHHHHHHHHHHHHHH-----TCSEEEHHHHTTTHHHHHHHHHH-
T ss_pred Ccc-cCCCHHHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCEeeHHHHHHHHHHHHHHHH-
Confidence 343 458999999999999 999999999 9999999999999999976 26789998887 68999999985
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchh-hhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCC
Q 038386 205 FGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKI-LFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDID 283 (523)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 283 (523)
||.+.++ ...+......+..... ..+.++...+ ......++..+..+.+.+++.++|+++++. .
T Consensus 192 ~G~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~ 256 (450)
T 3tkt_A 192 LGVPPED--EPKMLFLTQQMFGGQD----EDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN---------P 256 (450)
T ss_dssp TTCCGGG--HHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHS---------C
T ss_pred cCCChhH--HHHHHHHHHHHhcccc----chhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC---------C
Confidence 9977532 2334333333221111 1111211111 112234566778888889999999888763 3
Q ss_pred ccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCccc
Q 038386 284 SESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDD 363 (523)
Q Consensus 284 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 363 (523)
..|+++.|++... ++..+++++++.++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 257 ~~dll~~ll~~~~--~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~--------------- 319 (450)
T 3tkt_A 257 TDDVATVIANAVV--DGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR--------------- 319 (450)
T ss_dssp CSSHHHHHHTCEE--TTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------
T ss_pred CCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH---------------
Confidence 4689999998763 34569999999999999999999999999999999999999999999985
Q ss_pred ccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCC
Q 038386 364 LVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNG 443 (523)
Q Consensus 364 ~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~ 443 (523)
+||+|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 320 ----~~l~a~i~E~LRl~pp~~~--~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~------- 386 (450)
T 3tkt_A 320 ----NLLPGIVEEAIRWTTPVQH--FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA------- 386 (450)
T ss_dssp ----GGHHHHHHHHHHHHCSBCE--EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT-------
T ss_pred ----HHHHHHHHHHHHhCCCccC--cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC-------
Confidence 3899999999999999995 499999999999999999999999999999999999999999999932
Q ss_pred CCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCcccccceEEeecCceeEEEee
Q 038386 444 GKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDLSEKAEFTIEMKNPLHARISP 520 (523)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (523)
..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ ++.+. .+........++|++++
T Consensus 387 ------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~-~~~~~--~~~~~~g~~~lpv~~~~ 449 (450)
T 3tkt_A 387 ------------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG-EPKRV--NSTFVGGFKSLPMRWKA 449 (450)
T ss_dssp ------------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS-CCEEC--CCSSBCCEEECEEEEEE
T ss_pred ------------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC-Ccccc--cCcccCCcccceEEEec
Confidence 35899999999999999999999999999999998 77764 22222 23344556678888764
No 62
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=2.1e-59 Score=459.24 Aligned_cols=386 Identities=14% Similarity=0.179 Sum_probs=294.9
Q ss_pred CCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHH
Q 038386 59 FQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRV 138 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~ 138 (523)
.++..+++++ ++||||+++..++ +++|++|+++++|+.++. .|++++...... .+++. .+++ ..+|+.|++
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~--~~~~~--~~l~-~~dg~~h~~ 123 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAE--PVMRG--PVLA-QMHGKEHSA 123 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCC--CSCC----------------C
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccc--cccCC--Cccc-cCCcHHHHH
Confidence 4677788877 5899999776666 799999999999996654 488776654332 33332 2344 458999999
Q ss_pred HhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhH-HHHHHHHHHhhhhhccCCcchhHHHHH
Q 038386 139 LRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCE-HFRYAIFYLLVKMCFGNNVEEQEIREL 217 (523)
Q Consensus 139 ~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~-~~~~~~~~v~~~~~fG~~~~~~~~~~~ 217 (523)
+|+++. ++|++..++ .+.+.+.+.+.++++.|.+ ++.+|+.. +...+++++++. +||.+.++ .+.+
T Consensus 124 ~Rr~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~ 190 (441)
T 3nc3_A 124 KRRIVV---RSFIGDALD-HLSPLIKQNAENLLAPYLE------RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD--HEKI 190 (441)
T ss_dssp CHHHHH---HHHHHTHHH-HHHHHHHHHHHHHHTTTTT------TTEEECCCCCHHHHHHHHHHH-HTTCCGGG--HHHH
T ss_pred HHHHHH---hhcCHHHHH-HHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH--HHHH
Confidence 999999 999999999 9999999999999988753 56789754 455689999998 58987643 2344
Q ss_pred HHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCC
Q 038386 218 GCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLP 297 (523)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 297 (523)
......+...... +.. .....+...+..+.+.+++.++|+++++. ...|+++.|++...
T Consensus 191 ~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~~~~l~~~~~~~i~~rr~~---------~~~Dll~~Ll~~~~- 249 (441)
T 3nc3_A 191 SEWHSGVADFITS------ISQ-----SPEARAHSLWCSEQLSQYLMPVIKERRVN---------PGSDLISILCTSEY- 249 (441)
T ss_dssp HHHHHHHHHHHHC------SCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHTTS---------CCSSHHHHHCC----
T ss_pred HHHHHHHHHhccc------ccC-----ChHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHHhhc-
Confidence 4444433332211 100 11123455667788888888888887642 45689999997653
Q ss_pred CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhh
Q 038386 298 SDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEG 377 (523)
Q Consensus 298 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~ 377 (523)
++..++++++++++..+++||+|||+.+++|++++|++||++|+++++|+ +||++||+|+
T Consensus 250 -~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~i~E~ 309 (441)
T 3nc3_A 250 -EGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR-------------------SLVPRAIAET 309 (441)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG-------------------GGHHHHHHHH
T ss_pred -cCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------------HHHHHHHHHh
Confidence 34569999999999999999999999999999999999999999999974 5999999999
Q ss_pred hcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCccc
Q 038386 378 LRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIK 457 (523)
Q Consensus 378 lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~ 457 (523)
||++|+++.. +|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||+..+.. ....+..
T Consensus 310 LRl~pp~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~---------~~~~~~~ 378 (441)
T 3nc3_A 310 LRYKPPVQLI--PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKS---------AFSGAAR 378 (441)
T ss_dssp HHHSCSBCEE--EEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGG---------TTSSSCS
T ss_pred hhcCCcccCc--cEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCccccc---------ccCCCCC
Confidence 9999999876 8999999999999999999999999999999999999999999999755310 0111467
Q ss_pred ccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEee
Q 038386 458 MMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISP 520 (523)
Q Consensus 458 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (523)
|+|||.|+|.|+|++||++|++++++.|+++| ++++.++++.+ ..+.++.+...++|++++
T Consensus 379 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~--~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 379 HLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDFCYA--ESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp SCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTCCCC--EECSSBCEESCCEEECC-
T ss_pred cccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCCccc--ccCccccCcceeEEEEec
Confidence 99999999999999999999999999999999 99998643333 345566788899998864
No 63
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=4.6e-59 Score=452.41 Aligned_cols=370 Identities=16% Similarity=0.158 Sum_probs=296.2
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhH
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWR 137 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~ 137 (523)
..+++.++.+|+++ |+|++++.++. .++|+||+.+++++. +.+.|++++..... . .+......++..+|+.|+
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~~-~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~---~-~~~~~~~~~~~~~g~~h~ 95 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANGG-HWIAARGDVVRELWG-DAERLSSQCLAVTP---G-LGKVMQFIPLQQDGAEHK 95 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTTS-EEEECSHHHHHHHHH-CTTTEESTTCCSST---T-HHHHHCCTTTTCCHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCCC-EEEEcCHHHHHHHHc-CcccccCCcccCCC---c-cccccccCccccCCcHHH
Confidence 45899999999999 99999888754 799999999999994 45678887743221 1 121112234455899999
Q ss_pred HHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhHHHH
Q 038386 138 VLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEIRE 216 (523)
Q Consensus 138 ~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~~~ 216 (523)
++|+++. ++|++..++ .+.+.+.+.+.++++.+.+ ++.+|+...+ ..++.++++. +||.+.++ .+.
T Consensus 96 ~~R~~~~---~~f~~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~ 162 (396)
T 3oft_A 96 AFRTPVM---KGLASRFVV-ALEPKVQAVARKLMESLRP------RGSCDFVSDFAEILPLNIFLT-LIDVPLED--RPR 162 (396)
T ss_dssp HHHHHHH---HHTCHHHHH-HHHHHHHHHHHHHHHHHGG------GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--HHH
T ss_pred HHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHhhh------cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHH
Confidence 9999999 999999999 9999999999999999864 4478887666 5566666665 68976532 233
Q ss_pred HHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhC
Q 038386 217 LGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRL 296 (523)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 296 (523)
+......+. .... .++..+..+.+.+++.++|+++++. ...|+++.|++...
T Consensus 163 ~~~~~~~~~------------~~~~-------~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~d~l~~ll~~~~ 214 (396)
T 3oft_A 163 LRQLGVQLT------------RPDG-------SMTVEQLKQAADDYLWPFIEKRMAQ---------PGDDLFSRILSEPV 214 (396)
T ss_dssp HHHHHHHHH------------SCCS-------SCCHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHTSCB
T ss_pred HHHHHHHHh------------CCCC-------HHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHHhhc
Confidence 333322211 1100 1234556777888889999888764 45799999998753
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHh
Q 038386 297 PSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILE 376 (523)
Q Consensus 297 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E 376 (523)
++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++ ||+|||+|
T Consensus 215 --~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E 273 (396)
T 3oft_A 215 --GGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-------------------LIPAAADE 273 (396)
T ss_dssp --TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHHHH
T ss_pred --cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------hHHHHHHH
Confidence 445699999999999999999999999999999999999999999999964 89999999
Q ss_pred hhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcc
Q 038386 377 GLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREI 456 (523)
Q Consensus 377 ~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~ 456 (523)
+||++|++ .. +|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||+.. .
T Consensus 274 ~lRl~p~~-~~--~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~-----------------~ 333 (396)
T 3oft_A 274 LMRRYPTV-AV--SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAP-----------------I 333 (396)
T ss_dssp HHHHCCCB-EE--EEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCCG-----------------G
T ss_pred HHHhcCcc-cC--ceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCCC-----------------C
Confidence 99999999 44 9999999999999999999999999999999999999999999999744 5
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCC-CCCcccccceEEeecCceeEEEe
Q 038386 457 KMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADE-DVDLSEKAEFTIEMKNPLHARIS 519 (523)
Q Consensus 457 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 519 (523)
.|+|||+|+|.|+|++||++|++++++.|+++| ++++.++ ++.+. .+ .......++|++.
T Consensus 334 ~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~--~~-~~~~~~~lpv~~~ 395 (396)
T 3oft_A 334 RHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMK--GG-NVGACTALPLVWR 395 (396)
T ss_dssp GSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEEE--CS-SBCEEEECEEEEC
T ss_pred CcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCceec--cc-cccCcccceEEeC
Confidence 799999999999999999999999999999999 9999862 22222 22 2344556777764
No 64
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=8.6e-59 Score=453.44 Aligned_cols=379 Identities=15% Similarity=0.157 Sum_probs=302.4
Q ss_pred CCCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchh
Q 038386 58 LFQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTW 136 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w 136 (523)
..+++.++.++++++| +|+++..++ +.++|+||+.+++|+ ++.+.|++++.... ...+......++..+|+.|
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~----~~~~~~~~~~~~~~dg~~h 110 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIY-RSPERFSSRVIWVP----REAGEAYDMVPTKLDPPEH 110 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHH-TCTTTEETTCCSSS----HHHHHHCCCTTTTCCTTTH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHH-cChhhccCCcccCC----cccccccccCCccCCcHHH
Confidence 3578999999998766 899888776 489999999999999 55668888774332 1122211122344589999
Q ss_pred HHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhHHH
Q 038386 137 RVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEIR 215 (523)
Q Consensus 137 ~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~~ 215 (523)
+++|+++. ++|++..++ .+.+.+.+.++++++.+.. ++.+|+...+ ..++.++++. +||.+.++ .+
T Consensus 111 ~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~ 177 (421)
T 3lxh_A 111 TPYRKAID---KGLNLAEIR-KLEDQIRTIAVEIIEGFAD------RGHCEFGSEFSTVFPVRVFLA-LAGLPVED--AT 177 (421)
T ss_dssp HHHHHHHH---HHHSHHHHH-TTHHHHHHHHHHHHHTTTT------TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG--HH
T ss_pred HHHHHHHh---hhcCHHHHH-HHHHHHHHHHHHHHHHHhh------cCCeehHHHHHHHHHHHHHHH-HcCCCHHH--HH
Confidence 99999999 999999999 9999999999999998753 4578976655 5577777765 58977532 23
Q ss_pred HHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhh
Q 038386 216 ELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELR 295 (523)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~ 295 (523)
.+......+... ... .+....++..+..+.+.+++.++|+++++. ...|+++.|++..
T Consensus 178 ~~~~~~~~~~~~------------~~~-~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll~~ll~~~ 235 (421)
T 3lxh_A 178 KLGLLANEMTRP------------SGN-TPEEQGRSLEAANKGFFEYVAPIIAARRGG---------SGTDLITRILNVE 235 (421)
T ss_dssp HHHHHHHHHHSC------------CCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------CCCSHHHHHHTSC
T ss_pred HHHHHHHHHhcc------------ccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHhhh
Confidence 343333332211 111 122334667778888889999998887653 4568999999875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHH
Q 038386 296 LPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVIL 375 (523)
Q Consensus 296 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~ 375 (523)
. ++..+++++++.++..+++||+|||+.+++|++++|++||++|++|++|++ ||+|||+
T Consensus 236 ~--~~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~ 294 (421)
T 3lxh_A 236 I--DGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL-------------------KLQRGVE 294 (421)
T ss_dssp B--TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-------------------HHHHHHH
T ss_pred c--cCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HHHHHHH
Confidence 3 345699999999999999999999999999999999999999999999986 7899999
Q ss_pred hhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCc
Q 038386 376 EGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNRE 455 (523)
Q Consensus 376 E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~ 455 (523)
|+||++|++ .. +|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||-
T Consensus 295 E~lRl~p~~-~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------------- 352 (421)
T 3lxh_A 295 ELFRRFAVV-SD--ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRD------------------- 352 (421)
T ss_dssp HHHHHCCCB-EE--EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCSC-------------------
T ss_pred HHHHhcCcc-CC--ceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCCC-------------------
Confidence 999999999 54 99999999999999999999999999999999999999999999941
Q ss_pred ccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 456 IKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 456 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..|+|||.|+|.|+|++||++|++++++.|+++| +|++.++. +.....+ .......++|++++|.
T Consensus 353 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~-~~~~~~~-~~~~~~~lpv~~~p~~ 418 (421)
T 3lxh_A 353 VTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRA-VPIYHSG-IVAAVENIPLEWEPQR 418 (421)
T ss_dssp CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTC-CCEEECS-SBCEEECCEEECCCC-
T ss_pred CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCC-Cceeccc-cccCceeeeEEEeccc
Confidence 5699999999999999999999999999999999 99998622 1222222 3455668999999875
No 65
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=8.1e-59 Score=450.18 Aligned_cols=366 Identities=16% Similarity=0.162 Sum_probs=287.2
Q ss_pred HHHHHhhcCCeEEEEeC-CE---eEEEecCHHHHHHHHHhCCcccccCCCC------Ccccccceee-ccccceeeCcCC
Q 038386 65 ISTLRLKYGPIITVRMG-SE---PSIYICNNTLAHQALINNGTVFADRPKS------TSIADDLIFA-NKRRGISTYPYG 133 (523)
Q Consensus 65 ~~~~~~kyG~i~~~~~~-~~---~~v~v~~p~~i~~i~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~i~~~~~g 133 (523)
+.+|+++ |||++++++ +. ++|+|+||+.+++++.++ ..|+.++.. ..+. .... ..+.++++ .+|
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~~g 93 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKG--IFRPRELVGNLMD-YDP 93 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC---------------CCTTCGGG-CCT
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcc--cccccccccCccc-cCC
Confidence 3457776 999998875 45 799999999999999433 357776651 1111 1100 01235554 489
Q ss_pred chhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH-HHHHHhhhhhccCCcchh
Q 038386 134 TTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY-AIFYLLVKMCFGNNVEEQ 212 (523)
Q Consensus 134 ~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~-~~~~v~~~~~fG~~~~~~ 212 (523)
+.|+++|+++. +.|++..++ .+.+.+.+.+.++++.+.. .++++|+.+++.. ++.++++. +||.++++.
T Consensus 94 ~~~~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~ 163 (398)
T 1lfk_A 94 PEHTRLRRKLT---PGFTLRKMQ-RMAPYIEQIVNDRLDEMER-----AGSPADLIAFVADKVPGAVLCE-LVGVPRDDR 163 (398)
T ss_dssp THHHHHHHHHG---GGGCHHHHH-HHHHHHHHHHHHHHHHHHH-----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH
T ss_pred HHHHHHHHHHH---hhhCHHHHH-HHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH
Confidence 99999999999 999999999 9999999999999999975 2668999999886 88888887 699987532
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHH
Q 038386 213 EIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLI 292 (523)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll 292 (523)
+.+......+ +... ...++..++.+.+.+++.++|+++++. ...|+++.|+
T Consensus 164 --~~~~~~~~~~------------~~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~---------~~~dll~~ll 214 (398)
T 1lfk_A 164 --DMFMKLCHGH------------LDAS------LSQKRRAALGDKFSRYLLAMIARERKE---------PGEGMIGAVV 214 (398)
T ss_dssp --HHHHHHHHHT------------TCTT------SCHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHH
T ss_pred --HHHHHHHHHH------------Hhcc------cchHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHH
Confidence 2222222211 1100 012445667778888899999887653 3468999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHH
Q 038386 293 ELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKA 372 (523)
Q Consensus 293 ~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a 372 (523)
+.. ++.+++++++.++..+++||+|||+++++|++++|++||++|+++++|++ ||+|
T Consensus 215 ~~~----~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a 271 (398)
T 1lfk_A 215 AEY----GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-------------------SAQR 271 (398)
T ss_dssp HHH----GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH-------------------HHHH
T ss_pred Hhc----CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHH
Confidence 865 23689999999999999999999999999999999999999999999875 7999
Q ss_pred HHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccc
Q 038386 373 VILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITR 452 (523)
Q Consensus 373 ~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~ 452 (523)
||+|+||++|+++.. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.
T Consensus 272 ~i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------- 334 (398)
T 1lfk_A 272 AVDELIRYLTVPYSP-TPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP---------------- 334 (398)
T ss_dssp HHHHHHHHHCCBSCC-SCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------------
T ss_pred HHHHHHHhCcccccc-cceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------------
Confidence 999999999999955 599999999999999999999999999999999999999999999973
Q ss_pred cCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEE
Q 038386 453 NREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHAR 517 (523)
Q Consensus 453 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.+...++....+....+...++|+
T Consensus 335 ---~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~ 397 (398)
T 1lfk_A 335 ---IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVA 397 (398)
T ss_dssp ---CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEE
T ss_pred ---CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCCccccccCcCcCCcccceee
Confidence 2489999999999999999999999999999999 8998752222333334444555666665
No 66
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=6.6e-59 Score=454.64 Aligned_cols=382 Identities=19% Similarity=0.243 Sum_probs=299.2
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceee-------ccccceeeC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFA-------NKRRGISTY 130 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~ 130 (523)
..+++.++.++ ++||||+++++| +++|++|+.+++|+.+ ...++.++...... ...+ ..+.++++
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~- 99 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRH-PSSCSDRTKSTIFQ--RQLAAETQPRPQGPASFLF- 99 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHC-TTEECCGGGCHHHH--HHHC---------CCCGGG-
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcC-cccccCcccccccc--cccccccccccccccchhh-
Confidence 45889999998 578999987765 8999999999999954 44445444321111 1111 11234444
Q ss_pred cCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCc
Q 038386 131 PYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNV 209 (523)
Q Consensus 131 ~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~ 209 (523)
.+|+.|+++|++++ +.|++..++ .+.+.+.+.+.++++ +.+ ++.+|+...+ ..+++++++. +||.+.
T Consensus 100 ~dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~-l~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 167 (418)
T 3r9b_A 100 LDPPDHTRLRGLVS---KAFAPRVIK-RLEPEITALVDQLLD-AVD------GPEFNLIDNLAYPLPVAVICR-LLGVPI 167 (418)
T ss_dssp CCTTHHHHHHHHHH---GGGSHHHHG-GGHHHHHHHHHHHHH-TCC------SSEEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred cCCchHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHh-hhc------cCCeehHHHHhCcCCHHHHHH-HcCCCH
Confidence 48999999999999 999999999 999999999999998 642 5589976555 6899999999 899887
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHH
Q 038386 210 EEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVD 289 (523)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~ 289 (523)
++. +.+......+............+| ....++..+..+.+.+++.++|+++++. ...|+++
T Consensus 168 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~i~~r~~~---------~~~d~l~ 229 (418)
T 3r9b_A 168 EDE--PKFSRASALLAAALDPFLALTGET-------SDLFDEQMKAGMWLRDYLRALIDERRRT---------PGEDLMS 229 (418)
T ss_dssp GGH--HHHHHHHHHHHHTTSCHHHHHSSC-------CTTHHHHHHHHHHHHHHHHHHHHHTTTS---------CCSSHHH
T ss_pred HHH--HHHHHHHHHHHhhcCccccccccC-------HHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCccHHH
Confidence 432 333333333322211111111111 1223566677788888888888877543 4579999
Q ss_pred HHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChh
Q 038386 290 TLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPY 369 (523)
Q Consensus 290 ~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~ 369 (523)
.|++... ++..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++ |
T Consensus 230 ~ll~~~~--~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~ 288 (418)
T 3r9b_A 230 GLVAVEE--SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-------------------R 288 (418)
T ss_dssp HHHHHHH--HSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-------------------G
T ss_pred HHHHhhh--ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-------------------h
Confidence 9998752 445699999999999999999999999999999999999999999999864 7
Q ss_pred HHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcc
Q 038386 370 LKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLD 449 (523)
Q Consensus 370 L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~ 449 (523)
++|||+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+| .
T Consensus 289 l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R---~----------- 352 (418)
T 3r9b_A 289 ASAVIEETMRYDPPVQLV--SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR---A----------- 352 (418)
T ss_dssp HHHHHHHHHHHSCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC---S-----------
T ss_pred HHHHHHHHHHhCCccccc--eeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCC---C-----------
Confidence 999999999999999987 799999999999999999999999999999999999999999999 1
Q ss_pred ccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 450 ITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 450 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
+..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .....+.++.+...++|++.+|.
T Consensus 353 -----~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 353 -----QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE---PEYKRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp -----CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC---CEECSCSSBCCEEECEEEC----
T ss_pred -----CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC---CccccCCcccCcceeEEEecCCC
Confidence 14589999999999999999999999999999999 8998853 23334566788889999999884
No 67
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=1e-58 Score=450.37 Aligned_cols=375 Identities=16% Similarity=0.133 Sum_probs=298.7
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCC--EeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeecc-ccceeeCcCCc
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGS--EPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANK-RRGISTYPYGT 134 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~--~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~ 134 (523)
..+++.++.++++ ||||++++..| .++++|++|+++++++ ++.+.|++++.............. +.++ +..+|+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl-~~~~~fs~~~~~~~~~~~~~~~~~~~~~l-~~~dg~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVL-APSAPLTSEYGMMIGFDRDHPDNSGGRMM-VVSEHE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHS-CTTSSEECTTCSSTTCCSSSCCTTTTTSG-GGCCHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHH-hChhhhcCCccccccccccccccccCCCc-cccCcH
Confidence 3578899999987 99999876344 7799999999999999 445568877654321100001001 2234 445899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhH
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~ 213 (523)
.|+++|+++. ++|++..++ .+.+.+.+.+.++++.+.+ ++.+|+..++ ..+++++++. +||.+.++
T Consensus 113 ~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~~------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-- 179 (415)
T 3mgx_A 113 QHRKLRKLVG---PLLSRAAAR-KLAERVRIEVGDVLGRVLD------GEVCDAATAIGPRIPAAVVCE-ILGVPAED-- 179 (415)
T ss_dssp HHHHHHHHHG---GGSSHHHHH-HSHHHHHHHHHHHTTTSSS------SSCEESTTTTTTHHHHHHHHH-HHTCCGGG--
T ss_pred HHHHHHHHhH---hhhCHHHHH-HHHHHHHHHHHHHHHHHHh------cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--
Confidence 9999999999 999999999 9999999999999988753 4479999887 6799999998 58976532
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
.+.+......+.... ...+.|. ...++.+.+.+++.++|+++++. ...|+++.|++
T Consensus 180 ~~~~~~~~~~~~~~~----~~~~~~~-----------~~~~~~~~l~~~~~~~i~~rr~~---------~~~dll~~ll~ 235 (415)
T 3mgx_A 180 EDMLIDLTNHAFGGE----DELFDGM-----------TPRQAHTEILVYFDELITARRKE---------PGDDLVSTLVT 235 (415)
T ss_dssp HHHHHHHHHHHTSCC----C----CC-----------CHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHH
T ss_pred HHHHHHHHHHHHccc----CcccchH-----------HHHHHHHHHHHHHHHHHHHHHhC---------CCCCHHHHHHh
Confidence 334444333322110 0001110 11256677888888988888764 44689999997
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
.. .+++++++.++..+++||+|||+++++|++++|++||++|+++++|+ |||+||
T Consensus 236 ~~------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~ 290 (415)
T 3mgx_A 236 DD------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-------------------ADVDTV 290 (415)
T ss_dssp CT------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-------------------SCHHHH
T ss_pred CC------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-------------------HhHHHH
Confidence 53 59999999999999999999999999999999999999999999985 699999
Q ss_pred HHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccccc
Q 038386 374 ILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRN 453 (523)
Q Consensus 374 i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~ 453 (523)
|+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||++|+||++|||+||.
T Consensus 291 i~E~LRl~pp~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------------- 351 (415)
T 3mgx_A 291 VEEVLRWTSPAMHV--LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------------- 351 (415)
T ss_dssp HHHHHHHHCCBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS-----------------
T ss_pred HHHHHHhcCccccc--ceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC-----------------
Confidence 99999999999955 99999999999999999999999999999999999999999999973
Q ss_pred CcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEeec
Q 038386 454 REIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISPR 521 (523)
Q Consensus 454 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 521 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.+ ++.+ ..+........++|++++|
T Consensus 352 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~-~~~~--~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 352 --NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLER-EPAW--LRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp --CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECS-CCEE--CSCSSBCCEEECEEEEEEC
T ss_pred --CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCC-Cccc--ccCCcccCceeeeEEEecC
Confidence 3489999999999999999999999999999999 899875 2222 2344456677899999987
No 68
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=4.5e-58 Score=444.34 Aligned_cols=375 Identities=17% Similarity=0.174 Sum_probs=291.5
Q ss_pred CCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccc-c-CCCC--CcccccceeeccccceeeCcC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFA-D-RPKS--TSIADDLIFANKRRGISTYPY 132 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~-~-~~~~--~~~~~~~~~~~~~~~i~~~~~ 132 (523)
..+++.++.+| ++||+||++++ ++.+.|+|+||+.+++++.++ .|+ + ++.. ..+....+.+..+.++++.
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH--
Confidence 35789999999 99999999998 788999999999999999653 466 5 4431 1110000111012345443
Q ss_pred CchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcch
Q 038386 133 GTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEE 211 (523)
Q Consensus 133 g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~ 211 (523)
.|+++|+.+. +.|++. ++ .+.+.+.+.+.++++.+.+. ++++|+...+ ..+++++++. +||.+.++
T Consensus 90 --~h~~~R~~~~---~~fs~~-~~-~~~~~i~~~~~~l~~~l~~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 156 (396)
T 1n40_A 90 --ADAGLRKAVM---KAITPK-AP-GLEQFLRDTANSLLDNLITE-----GAPADLRNDFADPLATALHCK-VLGIPQED 156 (396)
T ss_dssp --HHTTCHHHHH---HHTSSC-ST-THHHHHHHHHHHHHHHHHHH-----CSCEETTTTTHHHHHHHHHHH-HHTCCGGG
T ss_pred --HHHHHHHHHH---HhhChH-HH-HhHHHHHHHHHHHHHHHHhc-----CCCccHHHHHHHHhHHHHHHH-HhCCChhh
Confidence 9999999999 999999 99 99999999999999999752 5689998665 5799999998 89998753
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHH
Q 038386 212 QEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~l 291 (523)
. +.+......+... ....| .++..+..+.+ +++.++|+ . .+ ...|+++.|
T Consensus 157 ~--~~~~~~~~~~~~~------~~~~p----------~~~~~~~~~~~-~~~~~~i~----~---~~----~~~dll~~l 206 (396)
T 1n40_A 157 G--PKLFRSLSIAFMS------SADPI----------PAAKINWDRDI-EYMAGILE----N---PN----ITTGLMGEL 206 (396)
T ss_dssp H--HHHHHTHHHHTBC------CSSCC----------HHHHHHHHHHH-HHHHHHHH----C---TT----CCSHHHHHH
T ss_pred H--HHHHHHHHHHhcc------ccCCC----------HHHHHHHHHHH-HHHHHHHh----C---CC----CCCCHHHHH
Confidence 2 2333322221110 00011 13344555556 66666665 1 11 346899999
Q ss_pred HHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHH
Q 038386 292 IELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLK 371 (523)
Q Consensus 292 l~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~ 371 (523)
++...++++..+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++ ||+
T Consensus 207 l~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~ 267 (396)
T 1n40_A 207 SRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE-------------------LIP 267 (396)
T ss_dssp HHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------------GHH
T ss_pred HHhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH-------------------HHH
Confidence 9875211234699999999999999999999999999999999999999999999852 899
Q ss_pred HHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccc
Q 038386 372 AVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDIT 451 (523)
Q Consensus 372 a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~ 451 (523)
|||+|+||++|+++.. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+||||.+
T Consensus 268 a~i~E~lRl~p~~~~~-~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-------------- 332 (396)
T 1n40_A 268 AGVEELLRINLSFADG-LPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-------------- 332 (396)
T ss_dssp HHHHHHHHTCCCBCSC-EEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST--------------
T ss_pred HHHHHHHhhCCCcccc-cceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC--------------
Confidence 9999999999999955 5999999999999999999999999999999999999999999999862
Q ss_pred ccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEE
Q 038386 452 RNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 452 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.+++.++....+.+.++...++|++
T Consensus 333 ----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 396 (396)
T 1n40_A 333 ----TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 396 (396)
T ss_dssp ----TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred ----CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence 2489999999999999999999999999999999 59988632233334455667788888764
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=2.8e-57 Score=442.18 Aligned_cols=378 Identities=17% Similarity=0.157 Sum_probs=297.0
Q ss_pred CCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHHhCCcccccCCC--CCcccccc-----eee-ccccceee
Q 038386 59 FQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALINNGTVFADRPK--STSIADDL-----IFA-NKRRGIST 129 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~~~~~~~~-----~~~-~~~~~i~~ 129 (523)
.+++.++.+++++ |||+++++ ++.++++|++++.+++++.+. ..|++++. ..... . ... ....++ +
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~--~~~~~~~~~~~~~~~l-~ 112 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIID--DGIQKGGDGGLDLPNF-I 112 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSS--CCC-------CCCCCG-G
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcc--cccccccccccccCcc-c
Confidence 4688999999886 99998876 457799999999999999544 56766542 11111 1 111 112233 3
Q ss_pred CcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCC
Q 038386 130 YPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNN 208 (523)
Q Consensus 130 ~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~ 208 (523)
..+|+.|+++|++++ +.|++..++ .+.+.+.+.+.++++.+. .++++|+...+ ..++.++++. +||.+
T Consensus 113 ~~dg~~h~~~R~~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l~------~~~~~dl~~~~~~~~~~~vi~~-l~G~~ 181 (426)
T 3rwl_A 113 AMDRPRHDEQRKAVS---PIVAPANLA-ALEGTIRERVSKTLDGLP------VGEEFDWVDRVSIEITTQMLAT-LFDFP 181 (426)
T ss_dssp GCCTTHHHHHHHHHG---GGGCHHHHH-HHHHHHHHHHHHHHHTSC------SSSCEEHHHHTHHHHHHHHHHH-HHTCC
T ss_pred ccCchHHHHHHHHhh---hhhCHHHHH-HHHHHHHHHHHHHHHHhh------cCCCcchHHHHHHHHHHHHHHH-HcCCC
Confidence 458999999999999 999999999 999999999999999873 36789987776 5777887776 89987
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchH
Q 038386 209 VEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYV 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l 288 (523)
.++. +.+..+...+. .++.... ....+...+..+.+.+++.++++++++. + ...|++
T Consensus 182 ~~~~--~~~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~r~~~----~----~~~dll 238 (426)
T 3rwl_A 182 FEER--RKLTRWSDVTT----------AAPGGGV---VESWDQRKTELLECAAYFQVLWNERVNK----D----PGNDLI 238 (426)
T ss_dssp GGGT--HHHHHHHHHHT----------CCTTSSS---CSSHHHHHHHHHHHHHHHHHHHHHHHTS----C----CCSSHH
T ss_pred HHHH--HHHHHHHHHHH----------hccCccc---cccHHHHHHHHHHHHHHHHHHHHHHhhc----C----CCCCHH
Confidence 5332 22222221110 1111100 0112445566788888888888877321 1 557999
Q ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCCh
Q 038386 289 DTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMP 368 (523)
Q Consensus 289 ~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp 368 (523)
+.|++.. .++.+++++++.++..+++||+|||+++++|++++|++||++|++|++|+ +
T Consensus 239 ~~ll~~~---~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~-------------------~ 296 (426)
T 3rwl_A 239 SMLAHSP---ATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP-------------------A 296 (426)
T ss_dssp HHHHHCG---GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------G
T ss_pred HHHHhcc---cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh-------------------H
Confidence 9999876 44568999999999999999999999999999999999999999999984 3
Q ss_pred hHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCc
Q 038386 369 YLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNL 448 (523)
Q Consensus 369 ~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 448 (523)
||++||+|+||++|+++.. +|.+++|++++||.||||+.|.++.+++||||++|+||++|||+||..
T Consensus 297 ~l~a~i~E~LRl~p~~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~----------- 363 (426)
T 3rwl_A 297 LVETMVPEIIRWQTPLAHM--RRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP----------- 363 (426)
T ss_dssp GHHHHHHHHHHHHCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT-----------
T ss_pred hHHHHHHHHHHhcCccccC--ceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC-----------
Confidence 8999999999999999876 999999999999999999999999999999999999999999999942
Q ss_pred cccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEee
Q 038386 449 DITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISP 520 (523)
Q Consensus 449 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (523)
..|+|||.|+|.|+|++||++|++++++.|+++| ++++.++ +++ ..+....+...++|+++|
T Consensus 364 -------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~--~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 364 -------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAE-PER--VRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp -------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSC-CEE--CCCSSBCCEEECEEEEEC
T ss_pred -------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCC-Ccc--cccccccCcceeeEEEeC
Confidence 3599999999999999999999999999999999 9998852 222 233445666788888875
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=2.7e-56 Score=431.26 Aligned_cols=372 Identities=15% Similarity=0.183 Sum_probs=291.3
Q ss_pred CccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHHH
Q 038386 60 QLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVL 139 (523)
Q Consensus 60 ~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~ 139 (523)
+++.++.+++++ |||+++..| .++|++++.+++++.. ..|+.++...... .... .+.++ +..+|+.|+++
T Consensus 21 dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d--~~fs~~~~~~~~~--~~~~-~~~~l-~~~dg~~h~~~ 90 (394)
T 2wiy_A 21 NPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKL--PIMSVEPGWADAG--PWAV-ASDTA-LGSDPPHHTVL 90 (394)
T ss_dssp CCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTS--TTEECHHHHHTCG--GGGG-GGGSG-GGCCTTHHHHH
T ss_pred CccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcC--CCccccccccccc--cchh-ccccc-ccCCchHHHHH
Confidence 678888888764 899965533 6999999999999943 2454432111111 1111 11234 44599999999
Q ss_pred hhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHHHHHHHhhhhhccCCcchhHHHHHHH
Q 038386 140 RHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRYAIFYLLVKMCFGNNVEEQEIRELGC 219 (523)
Q Consensus 140 R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~ 219 (523)
|+++. +.|++..++ .+.+.+.+.+.++++.+.. ++++|+...+..++.++++..+||.+.++ .+.+..
T Consensus 91 R~~~~---~~fs~~~~~-~~~~~i~~~~~~l~~~~~~------~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--~~~~~~ 158 (394)
T 2wiy_A 91 RRQTN---KWFTPKLVD-GWVRTTRELVGDLLDGVEA------GQVIEARRDLAVVPTHVTMARVLQLPEDD--ADAVME 158 (394)
T ss_dssp HHHHH---TTCSHHHHH-HHTHHHHHHHHHHHHTCCT------TCCEEHHHHHTHHHHHHHHHHHHTCCCCC--HHHHHH
T ss_pred HHHHH---hccCHHHHH-HHHHHHHHHHHHHHHHHhc------cCCeeHHHHHHhhhHHHHHHHHcCCCHhH--HHHHHH
Confidence 99999 999999999 9999999999999887742 56899999999999999999999987643 222322
Q ss_pred HHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCC
Q 038386 220 AQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSD 299 (523)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 299 (523)
.... .. ......|... ...+..++...+.+++.++|+++++. +..|+++.|++.. .
T Consensus 159 ~~~~---~~---~~~~~~p~~~------~~~~~~~~~~~l~~~~~~~i~~rr~~---------~~~dll~~Ll~~~---~ 214 (394)
T 2wiy_A 159 AMFE---AM---LMQSAEPADG------DVDRAAVAFGYLSARVAEMLEDKRVN---------PGDGLADSLLDAA---R 214 (394)
T ss_dssp HHHH---HH---GGGSSSCCTT------HHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHHHHH---H
T ss_pred HHHH---HH---HhccCCccch------HHHHHHHHHHHHHHHHHHHHHHhhcC---------CCCcHHHHHHHhh---h
Confidence 2211 11 0011123211 12344456677788888888887643 3458999999876 2
Q ss_pred CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhc
Q 038386 300 RKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLR 379 (523)
Q Consensus 300 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lR 379 (523)
++.++++++.+++..+++||+|||+++++|++++|++||++|+++++|+ +|+++||+|+||
T Consensus 215 ~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~-------------------~~l~a~i~E~LR 275 (394)
T 2wiy_A 215 AGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE-------------------SARAAIINEMVR 275 (394)
T ss_dssp TTSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------GGHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh-------------------HhHHHHHHHHHh
Confidence 3459999999999999999999999999999999999999999999975 378999999999
Q ss_pred CCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCccccc
Q 038386 380 RHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMM 459 (523)
Q Consensus 380 l~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~ 459 (523)
++|+++.. +|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||++. ..++
T Consensus 276 l~pp~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~-----------------~~~l 336 (394)
T 2wiy_A 276 MDPPQLSF--LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA-----------------SRNL 336 (394)
T ss_dssp HSCSBCEE--EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG-----------------SCCS
T ss_pred hCCCccCe--eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC-----------------CCcc
Confidence 99999855 8999999999999999999999999999999999999999999999854 3599
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCcccccceEEeecCceeEEE
Q 038386 460 PFGAGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 460 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
|||+|+|.|+|++||++|++++++.|+++|+ +++.+ ++.+. .+...++...++|++
T Consensus 337 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~-~~~~~--~~~~~~g~~~lpv~~ 393 (394)
T 2wiy_A 337 SFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAE-EPTVA--HNDFARRYRKLPIVL 393 (394)
T ss_dssp TTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESS-CCEEC--CCSSBCCEEECEEEE
T ss_pred CCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECC-CCccc--ccccccCcceeeEEe
Confidence 9999999999999999999999999999998 99875 33332 233456667777765
No 71
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=8.6e-56 Score=424.26 Aligned_cols=358 Identities=17% Similarity=0.196 Sum_probs=279.9
Q ss_pred cHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCC-----CCcccccce-eec-cccceeeCcCCc
Q 038386 62 GPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPK-----STSIADDLI-FAN-KRRGISTYPYGT 134 (523)
Q Consensus 62 ~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-----~~~~~~~~~-~~~-~~~~i~~~~~g~ 134 (523)
+..+.++ ++||||+++ | +.++|++|+.+++++.+ .+.|++++. ......... ++. .+.++++ .+|+
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNN-FSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLT-SDPP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHC-TTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGG-CCTT
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcC-ccccccccccccccccccccccccccccccccccc-CCCh
Confidence 4567788 589999965 4 47999999999999975 446887764 110000010 221 1134544 4899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhH
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~ 213 (523)
.|+++|+++. +.|++..++ .+.+.+.+.++++++.+ . ++ .+|+.+.+ ..+++++++.+ ||.+.++.
T Consensus 75 ~h~~~R~~~~---~~f~~~~~~-~~~~~i~~~~~~l~~~l-~-----~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~- 141 (368)
T 1io7_A 75 LHDELRSMSA---DIFSPQKLQ-TLETFIRETTRSLLDSI-D-----PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK- 141 (368)
T ss_dssp HHHHHHGGGT---TTTCHHHHH-HHHHHHHHHHHHHHHTC-C-----TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH-
T ss_pred HHHHHHHHHH---hhcCHHHHH-HHHHHHHHHHHHHHHHh-h-----cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH-
Confidence 9999999999 999999999 99999999999999998 3 23 69999866 78999999999 99987532
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
+.+......+. ... ..|. ..++..+..+.+.+++.+++ . ...|+++.|++
T Consensus 142 -~~~~~~~~~~~------~~~-~~p~--------~~~~~~~~~~~~~~~~~~~i----------~----~~~d~l~~ll~ 191 (368)
T 1io7_A 142 -EKFKEWSDLVA------FRL-GKPG--------EIFELGKKYLELIGYVKDHL----------N----SGTEVVSRVVN 191 (368)
T ss_dssp -HHHHHHGGGCT------TSC-CCTT--------CHHHHHHHHHHHHHHHHHHT----------T----SSCHHHHHHHT
T ss_pred -HHHHHHHHHHH------hcc-CChH--------HHHHHHHHHHHHHHHHHHHh----------C----CCCCHHHHHHh
Confidence 22222111100 000 0121 11334455566666666655 1 34689999986
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
. .++++++..++..+++||+|||+++++|++++|++|| +|+++++| + |++||
T Consensus 192 ~-------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~-------------------~l~a~ 243 (368)
T 1io7_A 192 S-------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N-------------------LYLKA 243 (368)
T ss_dssp S-------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T-------------------CHHHH
T ss_pred c-------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c-------------------hHHHH
Confidence 4 5899999999999999999999999999999999999 99999998 2 78999
Q ss_pred HHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccccc
Q 038386 374 ILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRN 453 (523)
Q Consensus 374 i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~ 453 (523)
|+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|||+ .
T Consensus 244 i~E~lRl~p~~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------------- 304 (368)
T 1io7_A 244 IEEALRYSPPVMR--TVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN--P--------------- 304 (368)
T ss_dssp HHHHHHHSCSBCC--EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC--S---------------
T ss_pred HHHHHHhCccccc--CceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC--C---------------
Confidence 9999999999994 59999999999999999999999999999999999999999999992 1
Q ss_pred CcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhcE-eEecCCCCCcccccceEEeecCceeEEEeecC
Q 038386 454 REIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKFE-WNKADEDVDLSEKAEFTIEMKNPLHARISPRV 522 (523)
Q Consensus 454 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 522 (523)
..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ +.+. .+.+..+...++|++++|+
T Consensus 305 --~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--~~~~--~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 305 --NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD--TEKV--PNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp --CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE--EEEC--CCSSBCCEEEEEEEEEC--
T ss_pred --CCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC--ceec--cCCcccCCceeEEEeccCC
Confidence 34899999999999999999999999999999996 99875 2232 2445577789999999985
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=1.3e-55 Score=422.29 Aligned_cols=356 Identities=17% Similarity=0.170 Sum_probs=280.2
Q ss_pred cHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC--ccc---cc-ceeecc-ccceeeCcCCc
Q 038386 62 GPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST--SIA---DD-LIFANK-RRGISTYPYGT 134 (523)
Q Consensus 62 ~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~--~~~---~~-~~~~~~-~~~i~~~~~g~ 134 (523)
+..+.+++ +||||++++ | .++|++|+.+++++.++ +.|++++... .+. .. .+.+.. ..++++. +|+
T Consensus 2 ~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg~ 74 (367)
T 3b4x_A 2 YDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DPP 74 (367)
T ss_dssp HHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CTT
T ss_pred CHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cch
Confidence 45677774 799999766 3 79999999999999754 4787775321 110 00 122210 1355554 899
Q ss_pred hhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhH
Q 038386 135 TWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQE 213 (523)
Q Consensus 135 ~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~ 213 (523)
.|+++|++++ +.|++..++ . +.+.+.++++++.+. +.+|+.+.+ ..+++++++. +||.+ ++
T Consensus 75 ~h~~~R~~~~---~~fs~~~l~-~--~~i~~~~~~l~~~l~--------g~~d~~~~~~~~~~~~vi~~-~~G~~-~~-- 136 (367)
T 3b4x_A 75 LHDELRNLTA---DAFNPSNLP-V--DFVREVTVKLLSELD--------EEFDVIESFAIPLPILVISK-MLGIN-PD-- 136 (367)
T ss_dssp HHHHHHHTTG---GGGSGGGSC-H--HHHHHHHHHHHHTCC--------SEEEHHHHTTTHHHHHHHHH-HHTCC-CC--
T ss_pred hHHHHHHHHH---HhcCHhhhc-c--hHHHHHHHHHHHhcc--------CCcchHHHHHHhhHHHHHHH-HcCCC-Cc--
Confidence 9999999999 999999998 6 888999988888764 249999765 7999999999 79998 43
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHH
Q 038386 214 IRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIE 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~ 293 (523)
.+.+......+..... ..|.+. +.. +..+.+.+++.++|+++++. ...|+++.|++
T Consensus 137 ~~~~~~~~~~~~~~~~------~~p~~~--------~~~-~~~~~~~~~~~~~i~~r~~~---------~~~dll~~ll~ 192 (367)
T 3b4x_A 137 VKKVKDWSDLVALRLG------RADEIF--------SIG-RKYLELISFSKKELDSRKGK---------EIVDLTGKIAN 192 (367)
T ss_dssp HHHHHHHHHHHHTTTT------STTGGG--------CCC-HHHHHHHHHHHHHHHHHTTT---------CCSSHHHHHHT
T ss_pred HHHHHHHHHHHHhccC------CChhhH--------HHH-HHHHHHHHHHHHHHHHHhcC---------CCCCHHHHHHh
Confidence 2334443333222110 122211 111 45667777888888776542 34689999996
Q ss_pred hhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHH
Q 038386 294 LRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAV 373 (523)
Q Consensus 294 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~ 373 (523)
. .++++++++++..+++||+|||+++++|++++|++ |++|+++++|++ +||
T Consensus 193 ~-------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~---------------------~a~ 243 (367)
T 3b4x_A 193 S-------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA---------------------LKA 243 (367)
T ss_dssp S-------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS---------------------HHH
T ss_pred c-------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc---------------------hHH
Confidence 4 58999999999999999999999999999999999 999999999853 899
Q ss_pred HHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCcccccc
Q 038386 374 ILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRN 453 (523)
Q Consensus 374 i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~ 453 (523)
|+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 244 i~E~lRl~p~~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------------- 304 (367)
T 3b4x_A 244 VEEALRFSPPVMR--TIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------------- 304 (367)
T ss_dssp HHHHHHHSCSBCC--EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS-----------------
T ss_pred HHHHHHhcCcccC--eeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC-----------------
Confidence 9999999999994 599999999999999999999999999999999999999999999984
Q ss_pred CcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEee
Q 038386 454 REIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISP 520 (523)
Q Consensus 454 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ ++. .+....+...++|++.+
T Consensus 305 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~--~~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 305 --NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK--EKI--DNEVLNGYRKLVVRVER 366 (367)
T ss_dssp --CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE--EEC--CCSSBCSEEEEEEEEEE
T ss_pred --CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc--ccc--ccccccCcceEEEEecC
Confidence 2489999999999999999999999999999999 7998862 333 24455677788888754
No 73
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=1.2e-55 Score=429.85 Aligned_cols=378 Identities=17% Similarity=0.134 Sum_probs=292.9
Q ss_pred CCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC-ccc---ccceeeccccceeeCcCC
Q 038386 58 LFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST-SIA---DDLIFANKRRGISTYPYG 133 (523)
Q Consensus 58 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~i~~~~~g 133 (523)
..++..+ ++.++||+++++++++.. ++|++++++++|+.++. +....... ... ........+.++ +..+|
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg 105 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFL-QSLDG 105 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSG-GGCCH
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCcc-ccCCc
Confidence 3457777 455679999998887776 99999999999996542 33211100 000 001111111233 44599
Q ss_pred chhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH-HHHHHHHHhhhhhccCCcchh
Q 038386 134 TTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH-FRYAIFYLLVKMCFGNNVEEQ 212 (523)
Q Consensus 134 ~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~-~~~~~~~v~~~~~fG~~~~~~ 212 (523)
+.|+++|++++ ++|++..++ .+.+.+.+.+.++++.+ . ++.+|+... ...+++++++. +||.+.++.
T Consensus 106 ~~h~~~Rr~~~---~~fs~~~l~-~~~~~i~~~~~~ll~~l-~------~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~ 173 (416)
T 3p3o_A 106 ADHRRLRGLAT---HPFTPRRIT-AVQPFVRSTVEQLIDKL-P------QGDFDFVQHFPHPLPALVMCQ-LLGFPLEDY 173 (416)
T ss_dssp HHHHHHHHTTC---GGGSHHHHH-HHHHHHHHHHHHHHHTC-C------SSSEEHHHHTTTHHHHHHHHH-HHTCCGGGH
T ss_pred hHHHHHHHHHH---HhhCHHHHH-HHHHHHHHHHHHHHHhh-c------cCCccHHHHHHHHHHHHHHHH-HhCCCHHHH
Confidence 99999999999 999999999 99999999999999998 3 335896554 45699999998 589875432
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHH
Q 038386 213 EIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLI 292 (523)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll 292 (523)
+.+......+.. .+... ......++..+..+.+.+++.++|+++++. ...|+++.|+
T Consensus 174 --~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~---------~~~dll~~ll 230 (416)
T 3p3o_A 174 --DTVGRLSIETNL---------GLALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE---------PGDDLTSDIV 230 (416)
T ss_dssp --HHHHHHHHTTCG---------GGTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS---------CCSSHHHHHH
T ss_pred --HHHHHHHHHHHh---------hcccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC---------CCccHHHHHH
Confidence 333222221111 11111 122334667778888999999999988764 4578999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHH
Q 038386 293 ELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKA 372 (523)
Q Consensus 293 ~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a 372 (523)
+...+ +.+++++++.++..+++||+|||+++++|++++|++||++|++|++|++ |+++
T Consensus 231 ~~~~~---~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-------------------~l~a 288 (416)
T 3p3o_A 231 RAFHD---GVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-------------------LAPQ 288 (416)
T ss_dssp HHHHT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHH
T ss_pred Hhhcc---CCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHH
Confidence 88742 3899999999999999999999999999999999999999999999863 8999
Q ss_pred HHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccc
Q 038386 373 VILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITR 452 (523)
Q Consensus 373 ~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~ 452 (523)
||+|+||++|+++.. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||.+
T Consensus 289 ~i~E~lRl~p~~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~--------------- 352 (416)
T 3p3o_A 289 AVEEVLRWSPTLPVT-ATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE--------------- 352 (416)
T ss_dssp HHHHHHHHSCSCSSC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------------
T ss_pred HHHHHHhhccccccC-cceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------------
Confidence 999999999999665 6999999999999999999999999999999999999999999999632
Q ss_pred cCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEEee
Q 038386 453 NREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARISP 520 (523)
Q Consensus 453 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.. +..+. .+..++....++|++.+
T Consensus 353 ---~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~-~~~~~--~~~~~~g~~~lpv~~~p 415 (416)
T 3p3o_A 353 ---APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAG-EITWR--HELGVAGPDALPLRFGA 415 (416)
T ss_dssp ---SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECS-CCEEC--CCTTCCCEEECEEEESC
T ss_pred ---CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCC-CCcee--cCCCccCcceeeEEEec
Confidence 3589999999999999999999999999999999 488875 22333 33445666778888754
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=2e-54 Score=420.10 Aligned_cols=387 Identities=17% Similarity=0.153 Sum_probs=283.7
Q ss_pred Cccceeeec---ccccCCCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCC--ccccc
Q 038386 43 PRFHLLAHL---LWHRKPLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKST--SIADD 117 (523)
Q Consensus 43 ~~~p~~G~~---~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~--~~~~~ 117 (523)
.++|.+|-- ..+ ..+++.+++++++ +|||+ |+++..+++|+++++|++++. +...|+...... ...
T Consensus 18 ~~~P~~~~dp~~~~~---~~dP~~~~~~lR~-~gPV~--~~~~~~~~~vt~~~~v~~vl~-d~~~fs~~~~~~~~~~~-- 88 (412)
T 4dnj_A 18 AGVPHLGIDPFALDY---FADPYPEQETLRE-AGPVV--YLDKWNVYGVARYAEVYAVLN-DPLTFCSSRGVGLSDFK-- 88 (412)
T ss_dssp TTSCEECCCTTSHHH---HHSCHHHHHHHHH-HCSSE--EETTTTEEEECSHHHHHHHHT-CTTTEESTTCSSSSCTT--
T ss_pred CCCCccCCCCCCHHH---HhCcHHHHHHHHh-cCCEE--EECCCCEEEECCHHHHHHHHc-CCccccCCCcccccccc--
Confidence 467877632 223 3478889988875 79998 777777899999999999994 444555432221 111
Q ss_pred ceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeeh-hHHHHHHH
Q 038386 118 LIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYV-CEHFRYAI 196 (523)
Q Consensus 118 ~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~-~~~~~~~~ 196 (523)
.-......+.++..||+.|+++|++++ ++|+++.++ .+.+.+.+.+.++++.+.. .++.+|+ .++...+.
T Consensus 89 ~~~~~~~~~~~~~~Dg~~H~r~R~~~~---~~Fs~~~l~-~~~~~i~~~~~~l~~~~~~-----~~~~~D~v~~~~~~~~ 159 (412)
T 4dnj_A 89 KEKPWRPPSLILEADPPAHTRTRAVLS---KVLSPATMK-RLRDGFAAAADAKIDELLA-----RGGNIDAIADLAEAYP 159 (412)
T ss_dssp TSCCSSCCCTTTTCCTTHHHHHHHHHH---HHTCHHHHH-HHHHHHHHHHHHHHHHHHH-----TTSEEETCCCCCCHHH
T ss_pred ccccccCCCccccCChHHHHHHHhhcc---cccCHHHHH-HhhHHHHHHHHHHHHhhhc-----cCCCceeHHHHHhhhh
Confidence 101111123344559999999999999 999999999 9999999999999998876 3667875 45556677
Q ss_pred HHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhh
Q 038386 197 FYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQE 276 (523)
Q Consensus 197 ~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 276 (523)
.++++.++.....+.+....+ ...+... ...... ...........+ ...+.++.+..
T Consensus 160 ~~~i~~l~g~~~~~~~~~~~~---~~~~~~~---------~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~-- 216 (412)
T 4dnj_A 160 LSVFPDAMGLKQEGRENLLPY---AGLVFNA---------FGPPNE-----LRQSAIERSAPH----QAYVAEQCQRP-- 216 (412)
T ss_dssp HHHHHHHHTCCSTTGGGHHHH---HHHHHHH---------TSCSSH-----HHHHHHHTCHHH----HHHHHHHTSGG--
T ss_pred HhHHHHHcCCchhhhhhhhhh---hhccccc---------ccccHH-----HHHHHHHHHHHH----HHHHHHHHHhh--
Confidence 777777654433333322222 2111111 111110 011111222222 22222222211
Q ss_pred hhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCC
Q 038386 277 NEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQ 356 (523)
Q Consensus 277 ~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~ 356 (523)
. ...+.+..++.... ++..++++++..++..+++||+|||+++++|++++|++||++|++|++|.
T Consensus 217 -~----~~~~~~~~l~~~~~--~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~-------- 281 (412)
T 4dnj_A 217 -N----LAPGGFGACIHAFS--DTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP-------- 281 (412)
T ss_dssp -G----SCTTSHHHHHHHTT--TTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------
T ss_pred -c----cccccchhhhHhhh--hccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc--------
Confidence 1 22345555555443 56779999999999999999999999999999999999999999999763
Q ss_pred cccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCccc
Q 038386 357 QWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFL 436 (523)
Q Consensus 357 ~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl 436 (523)
.++.++++|++|++|+++.. +|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 282 -----------~~~~~~~eE~lR~~pp~~~~--~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~ 348 (412)
T 4dnj_A 282 -----------SLARNAFEEAVRFESPVQTF--FRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT 348 (412)
T ss_dssp -----------GGHHHHHHHHHHHHCSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC
T ss_pred -----------cccccccceeeeecCCcccc--cccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC
Confidence 47889999999999999976 99999999999999999999999999999999999999999999964
Q ss_pred ccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCcee
Q 038386 437 YCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLH 515 (523)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (523)
..|+|||.|+|.|+|++||++|++++++.|+++| ++++.+ ++++ ..+.++++...++
T Consensus 349 -------------------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~-~~~~--~~~~~~rg~~~Lp 406 (412)
T 4dnj_A 349 -------------------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAG-PLKR--RFNNTLRGLESLP 406 (412)
T ss_dssp -------------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECS-CCEE--EECSSBEEEEECE
T ss_pred -------------------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECC-CCee--ecCCCccCCccee
Confidence 3489999999999999999999999999999999 899875 3233 3455667888999
Q ss_pred EEEee
Q 038386 516 ARISP 520 (523)
Q Consensus 516 ~~~~~ 520 (523)
|+++|
T Consensus 407 V~~tP 411 (412)
T 4dnj_A 407 IQLTP 411 (412)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
No 75
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.6e-55 Score=415.74 Aligned_cols=319 Identities=15% Similarity=0.189 Sum_probs=255.7
Q ss_pred hhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhHHHhhhhcccccc
Q 038386 70 LKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWRVLRHNFTRSSGF 149 (523)
Q Consensus 70 ~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~ 149 (523)
++||||+++ | +++|++|+.+++|+.++ +.|++++...... . ++.++++ .+|+.|+++|++++ ++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~--~----~~~~l~~-~~g~~~~~~R~~~~---~~ 65 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN--A----GGISFIT-MDNPEHKEFRDISA---PY 65 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC---------CCGGGG-CCHHHHHHHHHHHH---HH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC--c----ccccccc-CCchHHHHHHHHhh---hh
Confidence 589999954 3 89999999999999764 4688876322111 2 2235554 48999999999999 99
Q ss_pred ccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHH
Q 038386 150 LHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHF-RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMII 228 (523)
Q Consensus 150 f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 228 (523)
|++..++ .+.+.+.+.++++++.+. ++|+.+.+ ..+++++++.+ ||.+.++. +.+......+...
T Consensus 66 fs~~~l~-~~~~~i~~~~~~l~~~l~---------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~~~~~~~~~~~~~- 131 (343)
T 2rfb_A 66 FLPSKIN-DYKDFIEETSNDLIKNID---------NKDIISEYAVRLPVNIISKI-LGIPDSDM--PLFKLWSDYIIGN- 131 (343)
T ss_dssp HSHHHHG-GGHHHHHHHHHHHHTTCT---------TSCHHHHTTTHHHHHHHHHH-HTCCGGGH--HHHHHHHHHHHTS-
T ss_pred cCHHHHH-HHHHHHHHHHHHHHHhcc---------ccCHHHHHhhhhhHHHHHHH-cCCCHHHH--HHHHHHHHHHhhc-
Confidence 9999999 999999999999987764 57888765 89999999998 99887432 3333333222110
Q ss_pred hhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHH
Q 038386 229 NKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEI 308 (523)
Q Consensus 229 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i 308 (523)
..|.+. .+++. +..+.+.+++.+++ ..| ++.|++... ++..++++++
T Consensus 132 -------~~p~~~------~~~~~-~~~~~~~~~~~~~i----------------~~d-l~~ll~~~~--~~~~l~~~ei 178 (343)
T 2rfb_A 132 -------KRDENF------NYVNN-RMVSRLLEIFKSDS----------------HGI-INVLAGSSL--KNRKLTMDEK 178 (343)
T ss_dssp -------CCSSHH------HHHHH-HHHHHHHHHHHSCC----------------SSH-HHHHHTCBC--SSSBCCHHHH
T ss_pred -------cCcchh------hHHHH-HHHHHHHHHHHHHH----------------hcc-HHHHHhhhc--CCCCCCHHHH
Confidence 113221 12223 44444444444433 247 888887642 3456999999
Q ss_pred HHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcCCCCC-CCC
Q 038386 309 VSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPV-YLL 387 (523)
Q Consensus 309 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~-~~~ 387 (523)
..++..+++||+|||+++++|++++|++||++|+++++|+ +|||+|+||++|++ +.
T Consensus 179 ~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~a~i~E~lRl~p~~~~~- 235 (343)
T 2rfb_A 179 IKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR----------------------SGFVEETLRYYSPIQFL- 235 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH----------------------HHHHHHHHHHSCSBCCB-
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc----------------------HHHHHHHHhhCcccccc-
Confidence 9999999999999999999999999999999999999985 79999999999999 84
Q ss_pred CCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcccccccCCCCCC
Q 038386 388 DTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRV 467 (523)
Q Consensus 388 ~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~ 467 (523)
++|.+++|++++||.||||+.|.++.+++||||++|+||++|+|||+ . .++|||.|+|.
T Consensus 236 -~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~--~------------------~~~~FG~G~r~ 294 (343)
T 2rfb_A 236 -PHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR--E------------------MHLAFGIGIHM 294 (343)
T ss_dssp -CCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS--S------------------CCCTTCCSTTS
T ss_pred -cceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC--C------------------CCccCCCCCcc
Confidence 59999999999999999999999999999999999999999999994 1 37999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhhcE-eEecC
Q 038386 468 CPGLGLAILNLEYFVANLIWKFE-WNKAD 495 (523)
Q Consensus 468 C~G~~~a~~~~~~~l~~ll~~f~-~~~~~ 495 (523)
|+|++||++|++++++.|+++|+ +++.+
T Consensus 295 C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 323 (343)
T 2rfb_A 295 CLGAPLARLEASIALNDILNHFKRIKIDY 323 (343)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHCSCCCBCT
T ss_pred CCChHHHHHHHHHHHHHHHHhCCCceeCC
Confidence 99999999999999999999996 99876
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=1.5e-49 Score=384.82 Aligned_cols=374 Identities=13% Similarity=0.113 Sum_probs=278.1
Q ss_pred CCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCcccccceeeccccceeeCcCCchhH
Q 038386 59 FQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTSIADDLIFANKRRGISTYPYGTTWR 137 (523)
Q Consensus 59 ~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~w~ 137 (523)
.+++..+.++++..+ +++....++ .+++|+.+++|++|+. +...|+.+....... .+.....++...|++.|+
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~-d~~~fs~~~~~~~~~----~~~~~~~~~~~~D~p~H~ 110 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYS-DPTRFSSEVIFLPKE----AGEKAQMVPTKMDPPEHT 110 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEESSCCSSSTT----SSCSSCTTTTTCCTTTHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHc-CchhccCCCcccccc----cccccccCcccCCcHHHH
Confidence 467788888887654 455322333 4789999999999994 445677655433211 111222334455999999
Q ss_pred HHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHHHHH-HHHHHhhhhhccCCcchhHHHH
Q 038386 138 VLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEHFRY-AIFYLLVKMCFGNNVEEQEIRE 216 (523)
Q Consensus 138 ~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~-~~~~v~~~~~fG~~~~~~~~~~ 216 (523)
++|++++ ++|+++.++ .+.+.+++.++++++.+.. .+.+|+...+.. +...+++ .++|.+.++ ...
T Consensus 111 r~Rrll~---~~Fs~~~l~-~~~~~i~~~~~~lld~l~~------~g~~D~v~~~a~~l~~~vi~-~llg~~~~d--~~~ 177 (417)
T 4dxy_A 111 PYRKALD---KGLNLAKIR-KVEDKVREVASSLIDSFAA------RGECDFAAEYAELFPVHVFM-ALADLPLED--IPV 177 (417)
T ss_dssp HHHHHHH---HHHCHHHHH-TTHHHHHHHHHHHHHHHHT------TSEEEHHHHTTTTHHHHHHH-HHTTCCGGG--HHH
T ss_pred HHHHHhh---hhcCHHHHH-HHHHHHHHHHHHHHHHhhh------cCCeeeHHHHHhhhHHHHHH-HHcCCCHHH--HHH
Confidence 9999999 999999999 9999999999999998864 567887665544 4555554 457876532 233
Q ss_pred HHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHHHHHHhhhhhccCCccchHHHHHHhhC
Q 038386 217 LGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDRKKIKQENEERDIDSESYVDTLIELRL 296 (523)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 296 (523)
+......+.. .... ...............+..++.++++++++. +..|+++.|+....
T Consensus 178 ~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~rr~~---------~~ddl~s~L~~~~~ 235 (417)
T 4dxy_A 178 LSEYARQMTR----------PEGN---TPEEMATDLEAGNNGFYAYVDPIIRARVGG---------DGDDLITLMVNSEI 235 (417)
T ss_dssp HHHHHHHHHS----------CCCS---SHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------CCCSHHHHHHTCEE
T ss_pred HHhhhhhhcc----------cccc---ChHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------Cccchhhhhccccc
Confidence 3332222111 1111 122333455667777888888888776542 55789999997763
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHh
Q 038386 297 PSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILE 376 (523)
Q Consensus 297 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E 376 (523)
++..++++++..++..+++||+|||+++++|++++|++||++++++++|...+ .. ++ |
T Consensus 236 --~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~-av-e 293 (417)
T 4dxy_A 236 --NGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MR-GA-E 293 (417)
T ss_dssp --TTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HH-TH-H
T ss_pred --cCCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------cc-ce-e
Confidence 45679999999999999999999999999999999999999999999986542 12 22 4
Q ss_pred hhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCcc
Q 038386 377 GLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEFKPERFLYCDDKNGGKNNLDITRNREI 456 (523)
Q Consensus 377 ~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~~~~ 456 (523)
.+|++++.+.. .|.+++|++++|+.||+|+.|.++.+++||||++|+||++|||+|+ +.
T Consensus 294 e~~~~~~~~~~--~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~-------------------~~ 352 (417)
T 4dxy_A 294 EMFRRFPVVSE--ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR-------------------SI 352 (417)
T ss_dssp HHHHHSCCBEE--EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS-------------------CC
T ss_pred eeecccccccc--ccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC-------------------CC
Confidence 44444444444 8999999999999999999999999999999999999999999992 14
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEeecCceeEEE
Q 038386 457 KMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIEMKNPLHARI 518 (523)
Q Consensus 457 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
.|+|||+|+|.|+|++||++|++++++.||++| ++++.+++.++. .+.++.+...++|++
T Consensus 353 ~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~~~~--~~~~~~g~~~LPv~~ 413 (417)
T 4dxy_A 353 SHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIY--HSGIVAAVENVPLVW 413 (417)
T ss_dssp CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCCCEE--ECSSBCEEECCEEEC
T ss_pred CCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCCeee--cCCcccCceeeeEEe
Confidence 589999999999999999999999999999999 999886433332 233445666777776
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.2e-46 Score=355.77 Aligned_cols=338 Identities=14% Similarity=0.079 Sum_probs=224.8
Q ss_pred CCCC-CCccceeeecccccC--CCCCccHHHHHHHhhcCCeEEEEeCCEeEEEecCHHHHHHHHHhCCcccccCCCCCc-
Q 038386 38 LPPG-PPRFHLLAHLLWHRK--PLFQLGPIISTLRLKYGPIITVRMGSEPSIYICNNTLAHQALINNGTVFADRPKSTS- 113 (523)
Q Consensus 38 ~ppg-p~~~p~~G~~~~~~~--~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~- 113 (523)
.||| ++++|++|+...++. ...+++.++.+++++ +|+++. .+.++|++++.+++|+.+ ..|++++....
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccccc
Confidence 3777 447899998755321 245788999999976 998543 357999999999999964 36776643210
Q ss_pred ccc--cceeeccccceeeCcCCchhHHHhhhhccccccccccchhhhcchhhHHHHHHHHHHHHHHhhhcCCCeeehhHH
Q 038386 114 IAD--DLIFANKRRGISTYPYGTTWRVLRHNFTRSSGFLHSSSIKFNHSHLRGRVLEKLICELKREYCECRGDGVYVCEH 191 (523)
Q Consensus 114 ~~~--~~~~~~~~~~i~~~~~g~~w~~~R~~l~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~ 191 (523)
... ...+.....++++ .+|+.| . ++|+ . .+.+++.++++++.+. +.+|+...
T Consensus 108 ~~~~~~~~~~~~~~~l~~-~dg~~H-------~---~~Ft------~-~~~i~~~~~~ll~~~~--------g~~Dl~~~ 161 (381)
T 2yjn_B 108 WMRAAGAPPAEWAQPFRD-VHAASW-------E---GEVP------D-VGELAESFAGLLPGAG--------ARLDLVGD 161 (381)
T ss_dssp HHHHHTCCHHHHTHHHHH-HHHCCC-------C---SCCC------C-CSCHHHHTSTTSCC--------------CCCC
T ss_pred cccccccccchhhhhhhh-CCchhh-------h---hccC------C-hHHHHHHHHHHHHhcc--------CcchHHHH
Confidence 000 0000101123443 378888 5 6777 2 5677788888887764 25788866
Q ss_pred H-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHhhhhHHhhccccchhhhHHHHHHHHHhHHhHHHHHHHHHHHH
Q 038386 192 F-RYAIFYLLVKMCFGNNVEEQEIRELGCAQKKLFMIINKLKVFAIMPDLGKILFRKRWKKFLGIIRSREDVFVGLVRDR 270 (523)
Q Consensus 192 ~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 270 (523)
+ ..+++++++.+ ||.+.++. .+...+... .. .+ +. .. ...+.
T Consensus 162 ~a~~l~~~vi~~l-~G~~~~~~------~~~~~~~~~------~~-~~-~~---~~-~~~~~------------------ 204 (381)
T 2yjn_B 162 FAWQVPVQGMTAV-LGAAGVLR------GAAWDARVS------LD-AQ-LS---PQ-QLAVT------------------ 204 (381)
T ss_dssp CCTHHHHHHHHTC------CCH------HHHHHHTTH------HH-HT-TS---CC-CHHHH------------------
T ss_pred HHHHHHHHHHHHH-cCCCHHHH------HHHHHHHHh------cc-CC-CC---HH-HHHHH------------------
Confidence 5 79999999995 99987543 111111110 00 00 00 00 00000
Q ss_pred HHHHhhhhhccCCccchHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhCcHHHHHHHHHHHH
Q 038386 271 KKIKQENEERDIDSESYVDTLIELRLPSDRKVLEESEIVSLSDEFISHGSDTIATALHWVMANVVKYPKIQAKILDEING 350 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~ 350 (523)
.+ .++.++ . +++..+++||+|||+.+++|++++|++||+++++|++|++
T Consensus 205 ~~--------------~~~~l~------~----------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~- 253 (381)
T 2yjn_B 205 EA--------------AVAALP------A----------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA- 253 (381)
T ss_dssp HH--------------HHHHCC------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC-
T ss_pred HH--------------HHHHHH------H----------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH-
Confidence 00 000000 0 6788999999999999999999999999999999998853
Q ss_pred hhhcCCcccCcccccCChhHHHHHHhhhcCCCCCCCCCCCcccccCceeCCEEeCCCCEEeeccccccCCCCCCCCCCCC
Q 038386 351 VVEQGQQWINEDDLVKMPYLKAVILEGLRRHPPVYLLDTPHAVTEDVELGGYLVTKGISVNFLVADMGRDPNVWEDPLEF 430 (523)
Q Consensus 351 ~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F 430 (523)
|+++||+|+||++|+++.. +|.+++|++++|+.||||+.|.++.+++|+||++|+||++|
T Consensus 254 ------------------~l~~~i~E~LR~~pp~~~~--~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F 313 (381)
T 2yjn_B 254 ------------------AAQRTVAEVLRLHPALHLE--RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRL 313 (381)
T ss_dssp --------------------HHHHHHHHHHSCSCSEE--EEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSC
T ss_pred ------------------HHHHHhCeeeeecCCCcce--eEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCcccc
Confidence 8999999999999999965 89999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCCccccccCcccccccCCCCCCCcchHHHHHHHHHHHHHHhhhc-EeEecCCCCCcccccceEEe
Q 038386 431 KPERFLYCDDKNGGKNNLDITRNREIKMMPFGAGRRVCPGLGLAILNLEYFVANLIWKF-EWNKADEDVDLSEKAEFTIE 509 (523)
Q Consensus 431 ~P~Rfl~~~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~ 509 (523)
||+||.+ ..++|||.| |.|+|++||++|++++++.|+++| ++++.++.+.+ ..+.+++
T Consensus 314 ~p~R~~~------------------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~~~~--~~~~~~r 372 (381)
T 2yjn_B 314 DVDRPDA------------------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPVVRR--RRSPVLR 372 (381)
T ss_dssp CSSCSCC------------------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CCEEC--TTCSSSC
T ss_pred CCCCCCC------------------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCCccc--ccCcccC
Confidence 9999973 248999999 999999999999999999999999 99987633223 2334445
Q ss_pred ecCceeEE
Q 038386 510 MKNPLHAR 517 (523)
Q Consensus 510 ~~~~~~~~ 517 (523)
+...++|+
T Consensus 373 ~~~~LpV~ 380 (381)
T 2yjn_B 373 GTNRCPVE 380 (381)
T ss_dssp CEEECCCC
T ss_pred CCccceee
Confidence 55555554
No 78
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=67.35 E-value=27 Score=25.43 Aligned_cols=56 Identities=23% Similarity=0.313 Sum_probs=41.3
Q ss_pred CCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC------CEeEEEecCHHHHHHHHH
Q 038386 39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~------~~~~v~v~~p~~i~~i~~ 99 (523)
||.|...-++||+..- --.+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 4 ~~~~~~~l~V~nlp~~-----~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 4 PPEVNRILYIRNLPYK-----ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CTTCCSEEEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 5556556678887643 2356789999999999988872 344677789999988875
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=64.61 E-value=25 Score=25.23 Aligned_cols=50 Identities=8% Similarity=-0.029 Sum_probs=37.7
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 100 (523)
-++|++..- --.+.+.++..+||+|..+++. |.-+|...+++.++.++..
T Consensus 14 lfV~~Lp~~-----~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 14 VYIKGFPTD-----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEEECCCTT-----CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEECCCCC-----CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 367777532 2356789999999999988864 3456777999999999853
No 80
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=57.01 E-value=32 Score=23.78 Aligned_cols=53 Identities=8% Similarity=0.076 Sum_probs=37.5
Q ss_pred CCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC----CEeEEEecCHHHHHHH
Q 038386 40 PGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG----SEPSIYICNNTLAHQA 97 (523)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----~~~~v~v~~p~~i~~i 97 (523)
+-|...-++|++..- --.+.++++.++||+|..+++. |.-+|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~~-----~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTED-----MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCTT-----CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCC-----CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 334444577887643 2356789999999999999875 4567777999998854
No 81
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=56.70 E-value=41 Score=22.46 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=30.9
Q ss_pred cHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHH
Q 038386 62 GPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 62 ~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~ 99 (523)
.+.+.++..+||+|..+++. |.-+|-..+++.++..+.
T Consensus 21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 47789999999999988875 344677789999998884
No 82
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=53.06 E-value=59 Score=23.15 Aligned_cols=54 Identities=15% Similarity=0.031 Sum_probs=39.3
Q ss_pred ccceeeecccccCCCCC----ccHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHHh
Q 038386 44 RFHLLAHLLWHRKPLFQ----LGPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 44 ~~p~~G~~~~~~~~~~~----~~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~ 100 (523)
..-++||+..- ... ..+.+.++..+||+|..+++. |.-+|-..+++.++..+..
T Consensus 16 ~~l~V~nLp~~---~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 16 SVIVVDNVPQV---GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp SEEEEESCCCC---CTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred CEEEEeCCCcc---hhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 34578888743 211 357799999999999998875 4556777889888888753
No 83
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=49.78 E-value=43 Score=24.46 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=37.1
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC-------EeEEEecCHHHHHHHHHh
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS-------EPSIYICNNTLAHQALIN 100 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~-------~~~v~v~~p~~i~~i~~~ 100 (523)
-++||+..- --.+.+.++..+||+|..+++.. .-+|-..+++.++..+..
T Consensus 8 lfV~nLp~~-----~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS-----IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC-----CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 367887643 23578999999999998888642 346777999999988843
No 84
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.57 E-value=47 Score=23.51 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=43.4
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcC-CeEEEEeCCEeEEEecCHHHHHHHHHh-CCcccccCCCCC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYG-PIITVRMGSEPSIYICNNTLAHQALIN-NGTVFADRPKST 112 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~p~~i~~i~~~-~~~~~~~~~~~~ 112 (523)
.++|+..-. ........+.++..+|| +|..+ .+|.-+|...+.+.++..+.. ++..+-.|+...
T Consensus 13 YV~NL~~~~-~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i~v 78 (96)
T 2diu_A 13 YVYNLPANK-DGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRIIV 78 (96)
T ss_dssp EEESCCTTS-CHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCCEE
T ss_pred EEeCCCCcC-CHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceEEE
Confidence 478876431 12233455889999995 99877 578888999999999888743 555555555443
No 85
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=49.08 E-value=38 Score=22.14 Aligned_cols=40 Identities=3% Similarity=-0.119 Sum_probs=30.3
Q ss_pred ccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHh
Q 038386 61 LGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALIN 100 (523)
Q Consensus 61 ~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~ 100 (523)
-.+.+.++.++||+|..+.+.. .-+|-..+++.++.++..
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 3567889999999988887632 345666899999998843
No 86
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=48.89 E-value=48 Score=23.86 Aligned_cols=69 Identities=19% Similarity=0.135 Sum_probs=41.2
Q ss_pred CCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC----------CEeEEEecCHHHHHHHHHh-CCcccccC
Q 038386 40 PGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG----------SEPSIYICNNTLAHQALIN-NGTVFADR 108 (523)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 108 (523)
+.|...-+++|+...........+.+.+...+||.|..+++. |.-+|-..+++.+...... ++..|..|
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 344455567777632111234567889999999999888763 1224555788887776632 55444433
No 87
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=48.06 E-value=29 Score=22.72 Aligned_cols=40 Identities=8% Similarity=-0.000 Sum_probs=30.9
Q ss_pred ccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 038386 61 LGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 61 ~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 100 (523)
-.+.+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~ 60 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHh
Confidence 356788999999999888763 2345667899999999854
No 88
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=46.83 E-value=81 Score=22.92 Aligned_cols=59 Identities=8% Similarity=-0.061 Sum_probs=41.7
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--CEeEEEecCHHHHHHHHH-hCCcccccCC
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--SEPSIYICNNTLAHQALI-NNGTVFADRP 109 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--~~~~v~v~~p~~i~~i~~-~~~~~~~~~~ 109 (523)
-++||+..- --.+.+.++.++||+|..+.+. +.-+|-..+++.++..+. -++..+..+.
T Consensus 19 l~V~nLp~~-----~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 80 (115)
T 3beg_B 19 VVVSGLPPS-----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 80 (115)
T ss_dssp EEEEECCSS-----CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 467887633 2356788999999999988875 455677789999988885 3444444433
No 89
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.36 E-value=78 Score=21.76 Aligned_cols=60 Identities=20% Similarity=0.220 Sum_probs=40.9
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHh-CCcccccCC
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALIN-NGTVFADRP 109 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~-~~~~~~~~~ 109 (523)
--++|++..- --.+.+.++.++||+|..+.+.. .-+|-..+++.++..+.. ++..+..+.
T Consensus 7 ~l~v~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 76 (95)
T 2dnz_A 7 GLYVGSLHFN-----ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRP 76 (95)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCcE
Confidence 3467887533 23567899999999998888633 345667899999988852 444444333
No 90
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=43.09 E-value=88 Score=22.30 Aligned_cols=50 Identities=6% Similarity=-0.116 Sum_probs=38.2
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--CEeEEEecCHHHHHHHHHh
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--~~~~v~v~~p~~i~~i~~~ 100 (523)
-++||+..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPPS-----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCSS-----CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 467887632 2467889999999999888864 5667777999999988853
No 91
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.74 E-value=63 Score=21.67 Aligned_cols=52 Identities=13% Similarity=0.028 Sum_probs=36.9
Q ss_pred CccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHH
Q 038386 43 PRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~ 99 (523)
...-++|++..- --.+.+.++.++||+|..+.+.. .-+|-..+++.++..+.
T Consensus 5 ~~~l~v~nlp~~-----~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 5 SSGLYIRGLQPG-----TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CCEEEEESCCTT-----CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 334467887543 23567888899999998887632 34677789999988874
No 92
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=40.36 E-value=1.1e+02 Score=22.76 Aligned_cols=52 Identities=21% Similarity=0.084 Sum_probs=37.7
Q ss_pred CccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 43 PRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
...-++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 46 ~~~l~V~nLp~~-----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~ 106 (129)
T 2kxn_B 46 NCCLGVFGLSLY-----TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 106 (129)
T ss_dssp SSCBCEETCTTS-----CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 334567877543 2356789999999999988873 234566789999998885
No 93
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=38.05 E-value=84 Score=21.12 Aligned_cols=52 Identities=12% Similarity=0.168 Sum_probs=37.4
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHhC
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALINN 101 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~~ 101 (523)
--++|++..- --.+.+.++..+||+|..+++. +.-+|-..+++.++..+..+
T Consensus 13 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 13 KMFVGGLSWD-----TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEEECCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 4467887643 2457789999999999888763 12456668999999988543
No 94
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.91 E-value=1.1e+02 Score=21.98 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=39.1
Q ss_pred CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 038386 42 PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 99 (523)
|..--++||+..- ---+.++++..+||.|..+++. |.-+|-..+.+.+...+.
T Consensus 15 ~~~~LfV~nLp~~-----vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 15 PSRVIHIRKLPID-----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCEEEECSCCTT-----SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3334467887643 2356789999999999988864 455777789999888875
No 95
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.42 E-value=98 Score=21.18 Aligned_cols=56 Identities=23% Similarity=0.163 Sum_probs=39.1
Q ss_pred CCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
.|.|...-++|++..- --.+.+.++.++||+|..+.+. +.-+|-..+++.++..+.
T Consensus 11 ~~~~~~~l~v~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 75 (95)
T 2cqc_A 11 NPDPNCCLGVFGLSLY-----TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 75 (95)
T ss_dssp SCCGGGCEEEESCCSS-----CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCC-----CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHH
Confidence 3444445577887643 2356789999999999888763 123566689999998885
No 96
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=36.91 E-value=1e+02 Score=21.36 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=36.8
Q ss_pred CCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEE--------EEeC---------CEeEEEecCHHHHHHHHH
Q 038386 40 PGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIIT--------VRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~--------~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
|.|...-++||+..- --.+.+.++.++||.|.. +++. |.-+|-..+.+.++..+.
T Consensus 10 ~~~~~~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 10 HSDNNTIFVQGLGEN-----VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp CCCCSEEEEECCCSS-----CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC-----CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 333344567887643 235778999999999876 5542 133566689999988874
No 97
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=36.30 E-value=1.2e+02 Score=21.72 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=36.1
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 29 l~V~nLp~~-----~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 29 LYVGSLHFN-----ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEECCCSS-----CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 467887532 2456789999999999888763 234566789999998884
No 98
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=36.13 E-value=1.2e+02 Score=22.56 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=38.7
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC------CEeEEEecCHHHHHHHHHh-CCcccccC
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG------SEPSIYICNNTLAHQALIN-NGTVFADR 108 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 108 (523)
-++||+..-. ......+.+.++..+||+|..+.+. |.-+|...+++.+...+.. ++..+..+
T Consensus 32 LfV~nL~~~~-~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~lng~~l~gr 100 (127)
T 2a3j_A 32 VLITNINPEV-PKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEAFQGYPFQGN 100 (127)
T ss_dssp EEEESCCTTS-CHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHHSTTCCCTTS
T ss_pred EEEeCCCCCC-CHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHHHCCCEeCCC
Confidence 4678876321 1112233466889999999888873 3456777899988888743 33333333
No 99
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=35.64 E-value=31 Score=16.60 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHH
Q 038386 339 KIQAKILDEING 350 (523)
Q Consensus 339 ~~~~~l~~Ei~~ 350 (523)
++|.++|.|+.+
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578999999875
No 100
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=35.30 E-value=92 Score=21.83 Aligned_cols=56 Identities=9% Similarity=0.026 Sum_probs=38.2
Q ss_pred ccceeeecccccCC-CCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 44 RFHLLAHLLWHRKP-LFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 44 ~~p~~G~~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
..-++||++..... ..-..+.+.++..+||+|..+++. |.-+|-..+++.++..+.
T Consensus 7 ~~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 7 QYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp GEEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred cEEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 34467777642110 012356788999999999988874 344677789999988874
No 101
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=34.70 E-value=1.1e+02 Score=22.08 Aligned_cols=49 Identities=14% Similarity=0.131 Sum_probs=36.5
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++||+..- --.+.+.++..+||+|..+++. |.-+|...+++.++..+.
T Consensus 9 lfV~nL~~~-----~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~ 66 (110)
T 3s8s_A 9 VTFARLNDN-----VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVK 66 (110)
T ss_dssp EEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC-----CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHH
Confidence 467887633 2367789999999999988863 123677789999998874
No 102
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=34.51 E-value=1.1e+02 Score=20.81 Aligned_cols=59 Identities=12% Similarity=0.100 Sum_probs=39.6
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHHh-CCcccccC
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALIN-NGTVFADR 108 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 108 (523)
--++|++..- --.+.+.++.++||+|..+.+. +.-+|-..+.+.++..+.. +...+..+
T Consensus 10 ~l~V~nlp~~-----~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~l~g~~~~g~ 76 (92)
T 2dgv_A 10 QIFVRNLPFD-----FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGR 76 (92)
T ss_dssp EEEECSCCTT-----CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHHHTTCCBTTB
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 3467877632 2457789999999998888764 2335666899999888753 44444333
No 103
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=33.58 E-value=1.1e+02 Score=22.50 Aligned_cols=68 Identities=18% Similarity=0.151 Sum_probs=42.2
Q ss_pred CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC-------------EeEEEecCHHHHHHHHHh-CCccccc
Q 038386 42 PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS-------------EPSIYICNNTLAHQALIN-NGTVFAD 107 (523)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~-------------~~~v~v~~p~~i~~i~~~-~~~~~~~ 107 (523)
|...-++.|....--......+.+.+...+||+|..+++.. .-+|-..+++.++..+.. ++..|..
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 34455677775432123456788999999999998887642 223445788877766632 5545544
Q ss_pred CC
Q 038386 108 RP 109 (523)
Q Consensus 108 ~~ 109 (523)
|.
T Consensus 99 R~ 100 (118)
T 3ue2_A 99 RK 100 (118)
T ss_dssp EE
T ss_pred cE
Confidence 33
No 104
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.67 E-value=1.4e+02 Score=21.46 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=40.8
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHHh-CCcccccCCC
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALIN-NGTVFADRPK 110 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~~-~~~~~~~~~~ 110 (523)
-++||+..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+..++.
T Consensus 13 l~V~nLp~~-----~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l 76 (111)
T 1whx_A 13 ILAKNLPAG-----TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPL 76 (111)
T ss_dssp EEEESCCTT-----CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBC
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeEE
Confidence 356776532 3467789999999999988873 3345667899988887743 4444544443
No 105
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=32.58 E-value=1e+02 Score=23.24 Aligned_cols=51 Identities=10% Similarity=0.184 Sum_probs=36.2
Q ss_pred ccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC-----EeEEEecCHHHHHHHHH
Q 038386 44 RFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS-----EPSIYICNNTLAHQALI 99 (523)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~-----~~~v~v~~p~~i~~i~~ 99 (523)
..-++||+..- --.+.+.++..+||.|-.+++.. .-+|-..+++.++..+.
T Consensus 29 L~I~V~NL~~~-----vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 29 LRIIVENLFYP-----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEEEEESCCSC-----CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCCCC-----CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 34457888532 23567899999999998888753 24677788888877763
No 106
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.57 E-value=1.2e+02 Score=20.90 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=36.9
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
--++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 10 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 68 (99)
T 1whw_A 10 RLFVRNLSYT-----SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA 68 (99)
T ss_dssp EEEEECCCTT-----CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 3467777633 2356789999999999988874 234677799999998883
No 107
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=32.12 E-value=1.2e+02 Score=21.36 Aligned_cols=51 Identities=14% Similarity=0.125 Sum_probs=36.2
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 100 (523)
.-++||+..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 31 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFG-----VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3467777533 2356789999999999887764 2335666899999888853
No 108
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.85 E-value=1.4e+02 Score=21.19 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=31.9
Q ss_pred ccHHHHHHHhhcCCeEEEEeC----CEeEEEecCHHHHHHHHHh
Q 038386 61 LGPIISTLRLKYGPIITVRMG----SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 61 ~~~~~~~~~~kyG~i~~~~~~----~~~~v~v~~p~~i~~i~~~ 100 (523)
-.+.++++..+||+|..+++. |.-+|-..+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 357799999999999988874 3446777899999988854
No 109
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=31.46 E-value=1.2e+02 Score=20.80 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=36.6
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC--------EeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS--------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~--------~~~v~v~~p~~i~~i~~ 99 (523)
--++|++..- --.+.+.++.++||+|..+++.. .-+|-..+++.++..+.
T Consensus 18 ~l~v~nlp~~-----~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 18 TVFVGNLEAR-----VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEEECCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEEECCCCC-----CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 4467887643 23577899999999998888642 33566689999988885
No 110
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=31.25 E-value=1e+02 Score=22.62 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=36.1
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHhCC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALINNG 102 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~~~ 102 (523)
++|++..- --.+.+.++..+||+|..+.+.. .-+|-..+.+.++..+..++
T Consensus 40 ~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g 99 (124)
T 2jwn_A 40 YVGNVDYG-----STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDE 99 (124)
T ss_dssp EEEEECTT-----CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTT
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCC
Confidence 56776532 23577899999999998887632 33566789999998883333
No 111
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=30.64 E-value=1.2e+02 Score=20.21 Aligned_cols=50 Identities=16% Similarity=0.062 Sum_probs=36.1
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~ 99 (523)
--++|++..- --.+.+.++.++||+|..+.+.. .-+|-..+++.++..+.
T Consensus 8 ~l~v~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 66 (87)
T 3bs9_A 8 HVFVGDLSPE-----ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 66 (87)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 3467777532 23567899999999998887632 33566689999998885
No 112
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=30.38 E-value=1.3e+02 Score=21.02 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=35.5
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~ 99 (523)
-++||+..- --.+.+.++.++||+|..+++.. .-+|-..+++.++..+.
T Consensus 22 lfV~nLp~~-----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 79 (99)
T 4fxv_A 22 LIVNYLPQN-----MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79 (99)
T ss_dssp EEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHH
Confidence 367887643 23578899999999998887631 22566789999988874
No 113
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=30.31 E-value=1.3e+02 Score=20.64 Aligned_cols=57 Identities=12% Similarity=0.068 Sum_probs=40.7
Q ss_pred ceeeeccc-ccCCCCCccHHHHHHHhhcCCeEEEEeC-CEeEEEecCHHHHHHHHHh-CCccccc
Q 038386 46 HLLAHLLW-HRKPLFQLGPIISTLRLKYGPIITVRMG-SEPSIYICNNTLAHQALIN-NGTVFAD 107 (523)
Q Consensus 46 p~~G~~~~-~~~~~~~~~~~~~~~~~kyG~i~~~~~~-~~~~v~v~~p~~i~~i~~~-~~~~~~~ 107 (523)
-++|++.. - --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+..
T Consensus 13 l~V~nlp~~~-----~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g 72 (96)
T 2kvi_A 13 LFIGNLPLKN-----VSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFG 72 (96)
T ss_dssp EEEESSTTSC-----CCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBT
T ss_pred EEEeCCCccc-----CCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCC
Confidence 36788764 2 2356789999999999888873 4556777999999998863 4444433
No 114
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=30.28 E-value=1.4e+02 Score=20.77 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=35.6
Q ss_pred ccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHH
Q 038386 44 RFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQAL 98 (523)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~ 98 (523)
.|-++||+..- ---+.++++..+||+|..+++. |.-+|-..+++.+....
T Consensus 8 ~wL~VgNL~~~-----~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai 60 (89)
T 2wbr_A 8 SWLLLKNLTAQ-----IDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQ 60 (89)
T ss_dssp CEEEEECCCTT-----CCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred ceEEEeCCCcc-----CCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHH
Confidence 35567887643 2357899999999999988853 34456668887776665
No 115
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.06 E-value=1.4e+02 Score=20.81 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=39.9
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHh-CCcccc
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALIN-NGTVFA 106 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~-~~~~~~ 106 (523)
--++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.
T Consensus 15 ~l~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 81 (103)
T 2dnm_A 15 TLKVDNLTYR-----TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELD 81 (103)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBT
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 3467887643 2357789999999999988874 2346777888888888852 444443
No 116
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.75 E-value=99 Score=22.24 Aligned_cols=51 Identities=14% Similarity=0.058 Sum_probs=36.2
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHhCC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALINNG 102 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~~~ 102 (523)
++||+..- --.+.+.++..+||.|..+.+. +.-+|-..+.+.++..+..++
T Consensus 29 ~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 29 FCMQLAAR-----IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp EEESCCTT-----CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred EEeCCCCC-----CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 56776532 2356789999999999988874 234566788888888874343
No 117
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=29.73 E-value=1.3e+02 Score=21.88 Aligned_cols=51 Identities=8% Similarity=-0.086 Sum_probs=38.1
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcC-CeEEEEeC-----CEeEEEecCHHHHHHHHHh
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYG-PIITVRMG-----SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~-----~~~~v~v~~p~~i~~i~~~ 100 (523)
--++||+..- --.+.+.++.++|| .|..+.+. |.-+|-..+++.++..+..
T Consensus 30 ~l~VgnLp~~-----~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPEG-----CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSCC-----CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC-----CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 3467887643 34678999999999 78777773 4557778899999988843
No 118
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=29.68 E-value=1.1e+02 Score=22.48 Aligned_cols=54 Identities=19% Similarity=0.092 Sum_probs=37.5
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHHh-CCccc
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALIN-NGTVF 105 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~~-~~~~~ 105 (523)
--++|++ .. -.+.+.++..+||+|..+.++ +.-+|-..+.+.+...+.. ++..+
T Consensus 41 ~lfVgnl-~~------te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~ 98 (121)
T 2bz2_A 41 TLYVYGE-DM------TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQV 98 (121)
T ss_dssp EEEEECS-SC------CHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBC
T ss_pred EEEEcCC-CC------CHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEE
Confidence 3467772 22 357889999999998887765 4556777899988888743 44333
No 119
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=29.57 E-value=1.2e+02 Score=19.93 Aligned_cols=48 Identities=6% Similarity=-0.024 Sum_probs=34.0
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 5 ~V~nlp~~-----~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 61 (83)
T 3md1_A 5 FVGDLNVN-----VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMD 61 (83)
T ss_dssp EEECCCTT-----CCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHH
Confidence 45665432 2356788999999999888763 224677789999998885
No 120
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.56 E-value=1.4e+02 Score=20.58 Aligned_cols=52 Identities=13% Similarity=0.010 Sum_probs=37.4
Q ss_pred CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHHh
Q 038386 42 PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~~ 100 (523)
+..--++|++ .. -.+.+.++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 14 ~~~~l~V~n~-~~------t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 14 KGNTLYVYGE-DM------TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp CCSEEEEECS-SC------CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEcCC-CC------CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3334467873 22 357789999999999988875 4456667899999888843
No 121
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.05 E-value=1.4e+02 Score=20.56 Aligned_cols=57 Identities=12% Similarity=-0.052 Sum_probs=40.4
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHhCCcccc
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALINNGTVFA 106 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~~~~~~~ 106 (523)
--++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+.+.++..+..+...+.
T Consensus 12 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 12 KIFVGGIPHN-----CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp EEEEESCCSS-----CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 3467887633 2356789999999999988873 2345677999999998864444443
No 122
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=28.87 E-value=1.4e+02 Score=21.20 Aligned_cols=48 Identities=17% Similarity=0.195 Sum_probs=32.7
Q ss_pred ccHHHHHHHhhcCCeEEEEeC-----------CEeEEEecCHHHHHHHHH-hCCcccccC
Q 038386 61 LGPIISTLRLKYGPIITVRMG-----------SEPSIYICNNTLAHQALI-NNGTVFADR 108 (523)
Q Consensus 61 ~~~~~~~~~~kyG~i~~~~~~-----------~~~~v~v~~p~~i~~i~~-~~~~~~~~~ 108 (523)
..+.+++...+||+|..+++. |.-+|-..+++.++..+. -++..|..|
T Consensus 28 ~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR 87 (105)
T 3v4m_A 28 IVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 87 (105)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred HHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCC
Confidence 346788889999999999874 233566688888877663 244444433
No 123
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.69 E-value=67 Score=23.13 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=38.6
Q ss_pred cceeeecccccCCCCCccHHHH---HHHhhcCCeEEEEeC------------CEeEEEecCHHHHHHHHHh-CCcccc
Q 038386 45 FHLLAHLLWHRKPLFQLGPIIS---TLRLKYGPIITVRMG------------SEPSIYICNNTLAHQALIN-NGTVFA 106 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~---~~~~kyG~i~~~~~~------------~~~~v~v~~p~~i~~i~~~-~~~~~~ 106 (523)
.-++||+..- --.+.+. ++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.
T Consensus 17 ~l~V~nLp~~-----~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~ 89 (111)
T 2cpi_A 17 LVFVVGLSQR-----LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVD 89 (111)
T ss_dssp CEEEEEECTT-----TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEET
T ss_pred EEEEECCCCC-----CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEEC
Confidence 3467887643 2245666 888999999888764 2445666899999888864 444443
No 124
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.59 E-value=1.6e+02 Score=20.59 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=38.1
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHh
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALIN 100 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~ 100 (523)
--++|++..- --.+.+.++.++||+|..+.+.. .-+|-..+++.++..+..
T Consensus 17 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 17 TVYVGGLDEK-----VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEEEECCCTT-----CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 3467887643 23567899999999999888743 335777999999998854
No 125
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.58 E-value=1.6e+02 Score=20.55 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=38.2
Q ss_pred CccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHH
Q 038386 43 PRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~ 99 (523)
..--++|++..- --.+.+.++..+||+|..+++. +.-+|-..+.+.++..+.
T Consensus 15 ~~~l~V~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cq3_A 15 PKRLHVSNIPFR-----FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 73 (103)
T ss_dssp CCEEEEESCCTT-----CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHH
Confidence 334467887643 2356789999999999888873 344677789999998885
No 126
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=27.27 E-value=1.4e+02 Score=19.94 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=34.9
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHhCC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALINNG 102 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~~~ 102 (523)
++|++..- --.+.+.++.++||+|..+++.. .-+|-..+++.++..+..++
T Consensus 10 ~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g 69 (89)
T 3ucg_A 10 YVGNVDYG-----ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 69 (89)
T ss_dssp EEESCCTT-----CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTT
T ss_pred EEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCC
Confidence 45666432 23567899999999998887632 34566688998888874343
No 127
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.08 E-value=1.4e+02 Score=19.78 Aligned_cols=50 Identities=14% Similarity=-0.017 Sum_probs=37.6
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 99 (523)
--++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 14 ~l~V~~l~~~-----~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~ 66 (85)
T 2ytc_A 14 TLYVGGLGDT-----ITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAE 66 (85)
T ss_dssp CEEEECCTTT-----SCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHH
T ss_pred EEEEcCCCCC-----CCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3467887643 2357789999999999888864 445677789999999885
No 128
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=26.91 E-value=1.5e+02 Score=21.07 Aligned_cols=52 Identities=8% Similarity=0.082 Sum_probs=38.2
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHhC
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALINN 101 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~~ 101 (523)
--++|++..- --.+.+.++..+||+|..+++.. .-+|-..+.+.++..+...
T Consensus 27 ~lfV~nLp~~-----~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 27 KMFIGGLSWQ-----TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp CEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 4467887532 23567899999999999888742 3467779999999998543
No 129
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.78 E-value=1.6e+02 Score=20.51 Aligned_cols=61 Identities=20% Similarity=0.135 Sum_probs=40.8
Q ss_pred CCCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC----------EeEEEecCHHHHHHHHHhCCccc
Q 038386 39 PPGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS----------EPSIYICNNTLAHQALINNGTVF 105 (523)
Q Consensus 39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~----------~~~v~v~~p~~i~~i~~~~~~~~ 105 (523)
|+.|..--++|++..- --.+.+.++..+|| |..+++.. .-+|-..+++.++..+..+...+
T Consensus 11 ~~~~~~~l~V~nlp~~-----~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 81 (104)
T 1wi8_A 11 PKSPPYTAFLGNLPYD-----VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 81 (104)
T ss_dssp CSSSCEEEEEESCCSS-----CCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEE
T ss_pred CCCCCCEEEEeCCCCc-----CCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCCCEe
Confidence 3444444567887533 23567899999999 98888741 33567789999998884444333
No 130
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=26.65 E-value=1.9e+02 Score=22.87 Aligned_cols=48 Identities=10% Similarity=0.218 Sum_probs=35.0
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC-----CEeEEEecCHHHHHHHHH
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG-----SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-----~~~~v~v~~p~~i~~i~~ 99 (523)
++||+..- --.+.++++..+||.|-.+++. +.-+|-..|.+.+...+.
T Consensus 50 ~VgNL~~~-----vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~ 102 (164)
T 1sjr_A 50 IVENLFYP-----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 102 (164)
T ss_dssp EECSCCSC-----CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHH
T ss_pred EEeCcCCC-----CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHH
Confidence 46877532 2356789999999999888873 234677789988887774
No 131
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=26.43 E-value=1.5e+02 Score=20.54 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=38.5
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC----CEeEEEecCHHHHHHHHHh-CCcccccCC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG----SEPSIYICNNTLAHQALIN-NGTVFADRP 109 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----~~~~v~v~~p~~i~~i~~~-~~~~~~~~~ 109 (523)
++|++..- --.+.+.++.++||+|..+.+. +.-+|-..+++.+...+.. ++..+..+.
T Consensus 4 ~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 66 (101)
T 2hvz_A 4 YVGNLGTG-----AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSR 66 (101)
T ss_dssp EEECCCSS-----CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSCC
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCcE
Confidence 45665432 2356789999999998888763 3456667999999888853 333343333
No 132
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=26.21 E-value=70 Score=23.43 Aligned_cols=70 Identities=14% Similarity=0.106 Sum_probs=43.2
Q ss_pred CCCCCccceeeecccccCC-----CCCccHHHHHHHhhcCCeEEEEeC-----CEeEEEecCHHHHHHHHHh-CCccccc
Q 038386 39 PPGPPRFHLLAHLLWHRKP-----LFQLGPIISTLRLKYGPIITVRMG-----SEPSIYICNNTLAHQALIN-NGTVFAD 107 (523)
Q Consensus 39 ppgp~~~p~~G~~~~~~~~-----~~~~~~~~~~~~~kyG~i~~~~~~-----~~~~v~v~~p~~i~~i~~~-~~~~~~~ 107 (523)
+|-|..+-.+-|....-.. .....+.+.+...+||.|..+.+. |.-+|-..+++.++..+.. ++..|..
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 5566666667776554211 123445678888899999888873 3335666788888776632 5444443
Q ss_pred C
Q 038386 108 R 108 (523)
Q Consensus 108 ~ 108 (523)
|
T Consensus 83 R 83 (114)
T 3s6e_A 83 K 83 (114)
T ss_dssp E
T ss_pred E
Confidence 3
No 133
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=26.20 E-value=98 Score=18.18 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=18.5
Q ss_pred cHHHHHHHHHHHHhhhcCCcccCcccccCChhHHHHHHhhhcC
Q 038386 338 PKIQAKILDEINGVVEQGQQWINEDDLVKMPYLKAVILEGLRR 380 (523)
Q Consensus 338 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~lp~L~a~i~E~lRl 380 (523)
.|+++.+|.|++.+-.. .++|+-.|--|-
T Consensus 14 qEIL~E~RkElqK~K~E--------------IIeAi~~El~~~ 42 (45)
T 1use_A 14 QELLEEVKKELQKVKEE--------------IIEAFVQELRKR 42 (45)
T ss_dssp HHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH--------------HHHHHHHHHHhc
Confidence 46777778887765432 566666665553
No 134
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=25.54 E-value=1.5e+02 Score=19.60 Aligned_cols=52 Identities=12% Similarity=0.053 Sum_probs=37.4
Q ss_pred CccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 43 PRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
...-++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 7 ~~~l~V~nl~~~-----~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 7 KRVLYVGGLAEE-----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp SSEEEEECCCTT-----CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCC-----CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 334467887633 2357889999999999988863 234677789999988874
No 135
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=25.45 E-value=2e+02 Score=20.99 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=41.6
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHh-CCcccccCC
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALIN-NGTVFADRP 109 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~-~~~~~~~~~ 109 (523)
.-++||+..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+..+.
T Consensus 24 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 93 (126)
T 3ex7_B 24 ILFVTGVHEE-----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQP 93 (126)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeE
Confidence 3467777532 2356789999999999988873 3446777999999988853 544444433
No 136
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.41 E-value=1.5e+02 Score=20.63 Aligned_cols=49 Identities=10% Similarity=0.151 Sum_probs=34.9
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+.+.++..+.
T Consensus 11 l~V~nlp~~-----~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 68 (104)
T 1p1t_A 11 VFVGNIPYE-----ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68 (104)
T ss_dssp EEEESCCTT-----SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHH
T ss_pred EEEeCCCCc-----CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 366776532 2356789999999998777763 233566689999998884
No 137
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=25.41 E-value=40 Score=18.12 Aligned_cols=6 Identities=50% Similarity=0.888 Sum_probs=2.5
Q ss_pred Ccccch
Q 038386 1 MEILYY 6 (523)
Q Consensus 1 m~~~~~ 6 (523)
||.+.+
T Consensus 1 MEa~vY 6 (32)
T 3arc_T 1 METITY 6 (32)
T ss_dssp CHHHHH
T ss_pred CchHHH
Confidence 444333
No 138
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=25.21 E-value=1.8e+02 Score=20.36 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=35.8
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+.+.+...+.
T Consensus 26 l~V~nlp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 83 (106)
T 1p27_B 26 LFVTGVHEE-----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAME 83 (106)
T ss_dssp EEEECCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 467877543 2356789999999999888863 233566689999988885
No 139
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.08 E-value=1.3e+02 Score=19.42 Aligned_cols=50 Identities=8% Similarity=0.116 Sum_probs=33.4
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHhC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALINN 101 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~~ 101 (523)
++||+..- --.+.+.++.++||+|..+.+.. .-+|-..+++.++..+...
T Consensus 4 ~v~nlp~~-----~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 4 FIGGLSWQ-----TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp EEESCCSS-----CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 45665432 23567889999999987776532 2345557888888888543
No 140
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=25.08 E-value=1.7e+02 Score=20.05 Aligned_cols=49 Identities=20% Similarity=0.196 Sum_probs=35.9
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++.++||+|..+.+. +.-+|-..+++.+...+.
T Consensus 5 l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 5 VYLGSIPYD-----QTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp EEEESCCTT-----CCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC-----CCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 356776532 2356789999999999988873 334667789999988874
No 141
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.91 E-value=1.8e+02 Score=20.25 Aligned_cols=61 Identities=11% Similarity=0.008 Sum_probs=41.3
Q ss_pred CCCCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHHh-CCccc
Q 038386 40 PGPPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALIN-NGTVF 105 (523)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~-~~~~~ 105 (523)
+-+..--++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.+...+.. ++..+
T Consensus 12 ~~~~~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2d9p_A 12 RYQVVNLYVKNLDDG-----IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIV 80 (103)
T ss_dssp CSSCCCEEEECCCTT-----CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBS
T ss_pred CCCCCEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEe
Confidence 334445578887643 2356788999999999888864 2345666899999988853 44333
No 142
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.37 E-value=1.8e+02 Score=20.00 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=36.3
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC------------CEeEEEecCHHHHHHHHHh
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG------------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~------------~~~~v~v~~p~~i~~i~~~ 100 (523)
-++||+..- --.+.+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 8 LFIKNLNFS-----TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 467877633 2356789999999998888764 2335666899999998853
No 143
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.36 E-value=1.8e+02 Score=20.03 Aligned_cols=53 Identities=13% Similarity=-0.015 Sum_probs=37.5
Q ss_pred CCccceeeecccccCCCCCccHHHHHHHhhcCCeE-EEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 42 PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPII-TVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~-~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
+..--++|++..- --.+.+.++.++||+|. .+++. +.-+|-..+++.++..+.
T Consensus 8 ~~~~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 70 (99)
T 2div_A 8 MAASLWMGDLEPY-----MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 70 (99)
T ss_dssp SSSEEEECSCCTT-----CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHH
T ss_pred CccEEEEeCCCCC-----CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHH
Confidence 3334477887643 23577899999999988 77763 223566689999999885
No 144
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.36 E-value=1.7e+02 Score=19.84 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=38.1
Q ss_pred CccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHH
Q 038386 43 PRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~ 99 (523)
...-++|++..- --.+.+.++.++||+|..+.+.. .-+|-..+++.++..+.
T Consensus 16 ~~~l~V~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 16 KSTVYVSNLPFS-----LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp TTSEEEESCCTT-----SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCC-----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 334567887633 23567899999999999888742 34677799999988884
No 145
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.31 E-value=1.9e+02 Score=21.32 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=37.5
Q ss_pred ccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 038386 44 RFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 99 (523)
..-++||+..- ---+.++++..+||.|..+++. +.-+|-..+.+.+...+.
T Consensus 32 ~~LfVgNLp~~-----vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 32 RVIHIRKLPID-----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp SEEEEESCCTT-----CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 34467887643 2356789999999999888865 455677789998888874
No 146
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.03 E-value=1.9e+02 Score=20.22 Aligned_cols=56 Identities=9% Similarity=0.123 Sum_probs=38.9
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHhCCccc
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALINNGTVF 105 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~~~~~~ 105 (523)
--++|++..- --.+.+.++..+||+|..+.+.. .-+|-..+++.++.++..+...+
T Consensus 18 ~l~V~nlp~~-----~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~ 82 (105)
T 2dh8_A 18 KLFVGGLDWS-----TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTL 82 (105)
T ss_dssp EECCBSCCTT-----CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEE
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeE
Confidence 3467877533 23567899999999998877632 23566689999999886644333
No 147
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=23.92 E-value=1.7e+02 Score=20.74 Aligned_cols=45 Identities=20% Similarity=0.214 Sum_probs=29.0
Q ss_pred HHHHHHH-hhcCCeEEEEeCC--------EeEEEecCHHHHHHHHHh-CCccccc
Q 038386 63 PIISTLR-LKYGPIITVRMGS--------EPSIYICNNTLAHQALIN-NGTVFAD 107 (523)
Q Consensus 63 ~~~~~~~-~kyG~i~~~~~~~--------~~~v~v~~p~~i~~i~~~-~~~~~~~ 107 (523)
+.+.+.. .+||+|..+++.. .-+|-..+++.++..+.. ++..|..
T Consensus 41 edl~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~lng~~~~G 95 (104)
T 1jmt_A 41 EEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNG 95 (104)
T ss_dssp HHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 3445555 9999999998752 334555788888877642 4444433
No 148
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=23.87 E-value=1.2e+02 Score=24.59 Aligned_cols=50 Identities=8% Similarity=-0.021 Sum_probs=36.6
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--------CEeEEEecCHHHHHHHHHhC
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--------SEPSIYICNNTLAHQALINN 101 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~~ 101 (523)
++|++..- -..+.+.++..+||+|..+++. |.-+|-..+++.++..+...
T Consensus 113 ~V~nLp~~-----~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 113 YIKGFPTD-----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp EEECCCTT-----CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred EecCCCCc-----CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 56776532 3467899999999999888764 33456668999999998543
No 149
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.59 E-value=2e+02 Score=20.38 Aligned_cols=54 Identities=17% Similarity=0.081 Sum_probs=39.5
Q ss_pred CCCccceeeeccc-ccCCCCCccHHHHHHHhhcCCeEEEEeCC---EeEEEecCHHHHHHHHH
Q 038386 41 GPPRFHLLAHLLW-HRKPLFQLGPIISTLRLKYGPIITVRMGS---EPSIYICNNTLAHQALI 99 (523)
Q Consensus 41 gp~~~p~~G~~~~-~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---~~~v~v~~p~~i~~i~~ 99 (523)
.|...-++||+.. = ---+.++++..+||.|..+++.. .-+|-..+.+.+...+.
T Consensus 13 ~p~~~l~V~nLp~~~-----~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 13 ETRRVVHIMDFQRGK-----NLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCEEEEESCCCSS-----SHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCc-----CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3444556788764 2 23467889999999999999753 34677789999888874
No 150
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=23.45 E-value=2.6e+02 Score=23.23 Aligned_cols=59 Identities=17% Similarity=0.149 Sum_probs=41.5
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC----CEeEEEecCHHHHHHHHH-hCCcccccC
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG----SEPSIYICNNTLAHQALI-NNGTVFADR 108 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----~~~~v~v~~p~~i~~i~~-~~~~~~~~~ 108 (523)
-++||+..- .--.+.+.++.++||+|..+++. +.-+|-..+++.++..+. -++..+..+
T Consensus 37 l~V~nLp~~----~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 100 (229)
T 2adc_A 37 LLVSNLNPE----RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGK 100 (229)
T ss_dssp EEEESCCTT----TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSS
T ss_pred EEEeCCCcc----cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeECCe
Confidence 467887641 12357889999999999988875 445778899999998885 344444433
No 151
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.94 E-value=2e+02 Score=20.04 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=38.9
Q ss_pred CCCCccceeeecccccCCCCCccHHHHHHHhh-cCCeEEEEeC--------CEeEEEecCHHHHHHHHH
Q 038386 40 PGPPRFHLLAHLLWHRKPLFQLGPIISTLRLK-YGPIITVRMG--------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~k-yG~i~~~~~~--------~~~~v~v~~p~~i~~i~~ 99 (523)
+.|..--++||+..- --.+.+.++..+ ||.|..+.+. +.-+|-..+++.++..+.
T Consensus 6 ~~~~~~l~V~nLp~~-----~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 69 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPD-----VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALT 69 (104)
T ss_dssp SSCCCCEEEECCCTT-----CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC-----CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHH
Confidence 344444578887643 235678899999 9999888763 234566789999999885
No 152
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.84 E-value=1.9e+02 Score=19.96 Aligned_cols=53 Identities=11% Similarity=0.037 Sum_probs=37.5
Q ss_pred CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHH
Q 038386 42 PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~ 99 (523)
+...-++|++..- --.+.+.++..+||+|..+.+.. .-+|-..+++.++..+.
T Consensus 11 ~~~~l~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 72 (102)
T 2cqb_A 11 TKRVLYVGGLAEE-----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 72 (102)
T ss_dssp CCSCEEEESCCSS-----CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-----CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 3344567887643 23578899999999998888732 23455688999988884
No 153
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=22.81 E-value=2.2e+02 Score=22.12 Aligned_cols=49 Identities=12% Similarity=0.036 Sum_probs=36.2
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++||+..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 75 l~V~nLp~~-----~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 132 (165)
T 1rk8_A 75 LFVTSIHEE-----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 132 (165)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHH
Confidence 467777643 2467789999999999888764 334566689999988875
No 154
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=22.81 E-value=2e+02 Score=22.26 Aligned_cols=49 Identities=8% Similarity=0.253 Sum_probs=35.2
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcC--CeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYG--PIITVRMG---------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG--~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 100 (523)
++||+..- --.+.+.++..+|| .|..+++. |.-+|-..+.+.+...+..
T Consensus 59 fVgnLp~~-----~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 59 YVGSFSWW-----TTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp EEECCCTT-----CCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45665432 23567899999999 88888862 1346777899999998855
No 155
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=22.33 E-value=2.1e+02 Score=20.17 Aligned_cols=49 Identities=12% Similarity=0.036 Sum_probs=36.8
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 29 l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 29 LFVTSIHEE-----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 467877543 2356789999999999988874 344677789999988885
No 156
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=22.26 E-value=2.2e+02 Score=20.31 Aligned_cols=54 Identities=15% Similarity=0.001 Sum_probs=38.3
Q ss_pred CCccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHh
Q 038386 42 PPRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALIN 100 (523)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~ 100 (523)
+..--++|++..- --.+.+.++..+||.|..+.+.. .-+|-..+.+.++..+..
T Consensus 14 ~~~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 14 NHFHVFVGDLSPE-----ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp TCEEEEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3334567887643 23567899999999998887632 335666899999998853
No 157
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.17 E-value=2e+02 Score=19.83 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=37.0
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 100 (523)
.-++|++..- --.+.+.++..+||+|..+++. +.-+|-..+++.++..+..
T Consensus 19 ~l~v~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPFS-----CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 4467887643 2356789999999999888864 2345667899999888843
No 158
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=22.13 E-value=52 Score=23.99 Aligned_cols=16 Identities=31% Similarity=0.713 Sum_probs=13.8
Q ss_pred HHHHHhhcCCeEEEEe
Q 038386 65 ISTLRLKYGPIITVRM 80 (523)
Q Consensus 65 ~~~~~~kyG~i~~~~~ 80 (523)
.+++.+|||.+|++.+
T Consensus 10 ~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 10 TDELKQKYGRVYEIRI 25 (114)
T ss_dssp HHHHHHHHSSEEEEEE
T ss_pred HHHHHHHhCceEEEEe
Confidence 4789999999998776
No 159
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=21.79 E-value=3.2e+02 Score=22.06 Aligned_cols=49 Identities=16% Similarity=0.132 Sum_probs=36.7
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++.++||+|..+++. +.-+|-..+.+.++..+.
T Consensus 31 l~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 88 (216)
T 2qfj_A 31 VYVGSIYYE-----LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 88 (216)
T ss_dssp EEEECCCTT-----CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC-----CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHH
Confidence 356776532 2356789999999999988873 344677799999999885
No 160
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.62 E-value=2.1e+02 Score=20.33 Aligned_cols=49 Identities=14% Similarity=0.121 Sum_probs=36.0
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC-------CEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG-------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++.++||+|..+.+. +.-+|-..+.+.++..+.
T Consensus 32 l~V~nLp~~-----~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 32 LHVSNIPFR-----FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp EEEESCCTT-----CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred EEEECCCCc-----CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 356777532 2356789999999998888874 345677788998888875
No 161
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.51 E-value=2.2e+02 Score=20.06 Aligned_cols=53 Identities=11% Similarity=0.148 Sum_probs=38.4
Q ss_pred CccceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 038386 43 PRFHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---------SEPSIYICNNTLAHQALIN 100 (523)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 100 (523)
...-++|++..- --.+.+.++..+||+|..+.+. +.-+|-..+.+.+...+..
T Consensus 15 ~~~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 15 GKTVFIRNLSFD-----SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCCEEEESCCTT-----CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 344577887643 2356789999999999988875 2345666899999988853
No 162
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.45 E-value=1.2e+02 Score=21.78 Aligned_cols=50 Identities=6% Similarity=0.046 Sum_probs=36.2
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHHh
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALIN 100 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~~ 100 (523)
-++||+..- --.+.+.++..+||.|..+++.. .-+|-..+++.++..+..
T Consensus 30 l~V~nLp~~-----~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 30 LFIGGLSFE-----TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEEECCTTC-----CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 367777533 23567899999999988777632 345666899999999854
No 163
>2lea_A Serine/arginine-rich splicing factor 2; SR protein, RNA binding protein; NMR {Homo sapiens} PDB: 2leb_A 2lec_A
Probab=21.27 E-value=2.5e+02 Score=20.94 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=36.7
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeCC---------EeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMGS---------EPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~v~v~~p~~i~~i~~ 99 (523)
-++|++..- --.+.+.++..+||+|..+.+.. .-+|-..+.+.++..+.
T Consensus 50 l~V~nLp~~-----~te~~L~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~F~~~~~A~~Ai~ 107 (135)
T 2lea_A 50 LKVDNLTYR-----TSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 107 (135)
T ss_dssp EEEECCCSS-----CHHHHHHHHHGGGSCCSEEECCCCSSSSSCCSCCEEECSCHHHHHHHHT
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 467877532 24577899999999998888743 23677799999999884
No 164
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=20.97 E-value=1.7e+02 Score=20.81 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=31.7
Q ss_pred ccHHHHHHHhhcCCeEEEEeCC-EeEEEecCHHHHHHHHH
Q 038386 61 LGPIISTLRLKYGPIITVRMGS-EPSIYICNNTLAHQALI 99 (523)
Q Consensus 61 ~~~~~~~~~~kyG~i~~~~~~~-~~~v~v~~p~~i~~i~~ 99 (523)
-...+.++.+.||.+.--|+.. .=++++.+++.+++++.
T Consensus 18 Kt~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 57 (101)
T 3ctr_A 18 KTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVN 57 (101)
T ss_dssp CHHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred hhHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 4567899999999877667754 55688899999999996
No 165
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=20.93 E-value=2.2e+02 Score=20.20 Aligned_cols=40 Identities=10% Similarity=0.031 Sum_probs=32.0
Q ss_pred CccHHHHHHHhhcCCeEEEEeCC-EeEEEecCHHHHHHHHH
Q 038386 60 QLGPIISTLRLKYGPIITVRMGS-EPSIYICNNTLAHQALI 99 (523)
Q Consensus 60 ~~~~~~~~~~~kyG~i~~~~~~~-~~~v~v~~p~~i~~i~~ 99 (523)
--...+.++.+.||.+.--|+.. .=++++.+++.+++++.
T Consensus 27 wKt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 27 WKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp CCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hhhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 34678999999999876667754 55678899999999985
No 166
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=20.85 E-value=2.2e+02 Score=20.19 Aligned_cols=49 Identities=10% Similarity=0.115 Sum_probs=36.3
Q ss_pred ceeeecccccCCCCCccHHHHHHHhhcCCeEEEEe-CCEeEEEecCHHHHHHHHH
Q 038386 46 HLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRM-GSEPSIYICNNTLAHQALI 99 (523)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~v~v~~p~~i~~i~~ 99 (523)
-++||+..- --.+.+.++..+||+|..+.+ -|.-+|-..+.+.+...+.
T Consensus 34 l~V~nLp~~-----~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~ 83 (108)
T 2jvo_A 34 LFVRPFPLD-----VQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIE 83 (108)
T ss_dssp EEECSSCTT-----CCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHH
T ss_pred EEEECCCCC-----CCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 356776532 235678999999999888776 4556677789999988885
No 167
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.56 E-value=2.3e+02 Score=19.94 Aligned_cols=50 Identities=12% Similarity=0.111 Sum_probs=37.2
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG---SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 99 (523)
.-++||+..- --.+.+.++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~~-----~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPGE-----VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCTT-----CCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4567887642 2356788999999999888864 445677789998888874
No 168
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=20.40 E-value=2e+02 Score=19.09 Aligned_cols=48 Identities=21% Similarity=0.151 Sum_probs=35.0
Q ss_pred eeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC----------CEeEEEecCHHHHHHHHH
Q 038386 47 LLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG----------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----------~~~~v~v~~p~~i~~i~~ 99 (523)
++||+..- --.+.+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 8 ~V~nlp~~-----~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (88)
T 4a8x_A 8 HIGRLTRN-----VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 65 (88)
T ss_dssp EEECCCTT-----CCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHH
Confidence 56776532 2356788999999999888762 234567789999998885
No 169
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=20.33 E-value=2.5e+02 Score=20.23 Aligned_cols=59 Identities=20% Similarity=0.133 Sum_probs=40.5
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--------CEeEEEecCHHHHHHHHHh-CCcccccC
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--------SEPSIYICNNTLAHQALIN-NGTVFADR 108 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 108 (523)
--++|++..- --.+.+.++.++||+|..+.+. +.-+|-..+.+.++..+.. ++..+..+
T Consensus 9 ~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 76 (116)
T 2fy1_A 9 KLFIGGLNRE-----TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGK 76 (116)
T ss_dssp EEEEECCTTT-----CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 3467877532 2356789999999998887764 3446777899999988853 44444443
No 170
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=20.32 E-value=2.9e+02 Score=20.95 Aligned_cols=50 Identities=14% Similarity=0.011 Sum_probs=37.6
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC----CEeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG----SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----~~~~v~v~~p~~i~~i~~ 99 (523)
--++||+..- --.+.+.++..+||+|..+++. +.-+|-..+.+.+...+.
T Consensus 75 ~l~V~nl~~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 128 (150)
T 2i2y_A 75 KVYVGNLGNN-----GNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVR 128 (150)
T ss_dssp EEEEESCCSC-----CSCHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHH
Confidence 3467887643 2356789999999999988874 455677789999988885
No 171
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=20.20 E-value=2.3e+02 Score=19.73 Aligned_cols=50 Identities=16% Similarity=0.026 Sum_probs=36.6
Q ss_pred cceeeecccccCCCCCccHHHHHHHhhcCCeEEEEeC--------CEeEEEecCHHHHHHHHH
Q 038386 45 FHLLAHLLWHRKPLFQLGPIISTLRLKYGPIITVRMG--------SEPSIYICNNTLAHQALI 99 (523)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~v~v~~p~~i~~i~~ 99 (523)
--++|++..- --.+.+.++..+||+|..+++. +.-+|-..+++.++..+.
T Consensus 17 ~l~v~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 17 KLFVGMLNKQ-----QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 3467887643 2356789999999999888864 234566689999988874
Done!