Your job contains 1 sequence.
>038389
MELTQHGFLEELLAPPIARRDAWSSFSGGLNEYLPSGWILDSLDESSTLAAAASNPSSFV
GFSAAPSEASFECPPFTDHLHQGYHPFVDGFTVPEVDTSSYTKNEIPSFPSAQEEYPPMV
VEEDRDQLCLRSSDHLHQNHSFEETKSSCAEIEQATSNITNQGFNMGLCVDRKRKNKKLE
GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE
ETELGANQLLIGKFTELKSNEASVRNSPKFDVERREIDTRIDICCSSKPGLLLSTVNTLE
VLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQALFSNAGYGGKCL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038389
(353 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 713 2.1e-70 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 637 4.8e-66 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 532 3.1e-51 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 443 8.4e-42 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 221 9.8e-30 3
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 224 2.1e-28 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 189 4.1e-14 2
UNIPROTKB|Q5Z988 - symbol:P0548E04.5 "Os06g0724800 protei... 142 3.7e-12 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 180 6.6e-11 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 179 8.6e-11 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 177 1.2e-10 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 176 1.7e-10 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 164 3.3e-09 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 163 6.0e-09 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 157 1.0e-08 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 146 2.1e-08 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 155 5.5e-08 1
TAIR|locus:2078411 - symbol:AT3G56220 species:3702 "Arabi... 127 1.3e-07 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 144 1.4e-07 2
TAIR|locus:2828302 - symbol:AT2G40435 species:3702 "Arabi... 125 2.2e-07 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 142 3.1e-07 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 133 3.3e-07 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 140 7.5e-07 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 139 8.4e-07 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 142 1.2e-06 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 138 2.1e-06 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 138 2.2e-06 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 131 6.2e-06 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 133 7.1e-06 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 128 2.1e-05 1
UNIPROTKB|Q8LII5 - symbol:OJ1167_G06.116 "Putative unchar... 112 2.9e-05 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 125 3.3e-05 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 117 3.8e-05 2
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 107 3.9e-05 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 128 4.4e-05 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 121 5.1e-05 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 122 9.1e-05 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 120 0.00011 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 125 0.00015 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 117 0.00025 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 116 0.00029 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 117 0.00035 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 120 0.00036 2
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 109 0.00043 2
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 112 0.00048 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 109 0.00083 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 115 0.00083 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 113 0.00097 1
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 180/371 (48%), Positives = 225/371 (60%)
Query: 1 MEL-TQHGFLEELLAPPIARRDAWS----SFSGGLN----EYLPSGWILDSL--DESSTL 49
MEL TQ EELL P + SF+GG + ++ P+G+ +D L +
Sbjct: 1 MELSTQMNVFEELLVPTKQETTDNNINNLSFNGGFDHHHHQFFPNGYNIDYLCFNNEEED 60
Query: 50 AAAASNPSSFVGFSAAPSEASFECPPFTDHLHQGYHPFVDGFTVPEVDTSSYTKNEIPSF 109
PSSF+ + P PP LHQ P + + P +SS T +
Sbjct: 61 ENTLLYPSSFMDLISQP-------PPLL--LHQP--PPLQPLSPPL--SSSATAGATFDY 107
Query: 110 PSAQEEYPPMVVEEDRDQLCLRSSDHLHQNHSFEETKSSCAEIEQATSNITNQGFNMGLC 169
P + + L L++ + N+ S E +Q+ S F++G C
Sbjct: 108 PFLEALQEIIDSSSSSPPLILQNGQEENFNNPMSYP-SPLMESDQSKS------FSVGYC 160
Query: 170 --VDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYL 227
K+K+KKLEGQPSKNLMAE LNDRLSMLRSIVPKISKMDRTSILGD IDY+
Sbjct: 161 GGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 228 KELLERINKLQEEETELG-ANQL----LIGKFTELKSNEASVRNSPKFDVERREIDTRID 282
KELL++INKLQ+EE ELG +N L G +L +NE VRNSPKF+++RR+ DTR+D
Sbjct: 221 KELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVD 280
Query: 283 ICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQAL 342
ICCS KPGLLLSTVNTLE LGLEI+QCVISCF+DFSLQASCSE AE+R ++SE+IKQAL
Sbjct: 281 ICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQAL 340
Query: 343 FSNAGYGGKCL 353
F NAGYGG CL
Sbjct: 341 FRNAGYGGSCL 351
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 637 (229.3 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 125/183 (68%), Positives = 153/183 (83%)
Query: 171 DRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKEL 230
++KR NKKLEGQPSKNLMAE LNDRLS+LRSIVPKI+KMDRTSILGD IDY+KEL
Sbjct: 137 NKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKEL 196
Query: 231 LERINKLQEEETELGANQLLIGKFTELKSNEASVRNSPKFDVERREIDTRIDICCSSKPG 290
L++INKLQE+E ELG+N L + L +NE+ VRNS KF+V++RE++T IDICC +KPG
Sbjct: 197 LDKINKLQEDEQELGSNSHL----STLITNESMVRNSLKFEVDQREVNTHIDICCPTKPG 252
Query: 291 LLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQALFSNAGYGG 350
L++STV+TLE LGLEI+QCVISCF+DFSLQASC E E+R +++SE KQAL NAGYGG
Sbjct: 253 LVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGG 312
Query: 351 KCL 353
+CL
Sbjct: 313 RCL 315
Score = 53 (23.7 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 36 SGWILDSLDESSTLAAAASNPSSFVGFSAAPSEASFECPPFTDHLHQGYHPFVDGFTVPE 95
S +++ + + L PSS + + + P ++F+ P D +H Y P +
Sbjct: 56 SSSLMNLISQPPPLLHQPPQPSSPL-YDSPPLSSAFDYPFLEDIIHSSYSPPPLILPASQ 114
Query: 96 VDTSSYTK--NEIPSFPSAQE 114
+T++Y+ E SF S E
Sbjct: 115 ENTNNYSPLMEESKSFISIGE 135
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 154/372 (41%), Positives = 204/372 (54%)
Query: 1 MELTQHGFLEELLAPPIARRDA---WSS--FSGGLNEYLPSGWILDSL-----DESSTLA 50
MEL + FL+EL++ RRD W + + GG G ++ L D S A
Sbjct: 1 MELDEESFLDELMS---LRRDGSAPWQAPPYPGGGGGGGGGGMMMSDLLFYGGDGGSAEA 57
Query: 51 AAASNPSSF---VGFSAAPSEASFECPPFTDHLHQGYHPFVD-GFTVPEVDTSSYTKNEI 106
+ S F +A P + E F D L + +P+ G + + +S T+ ++
Sbjct: 58 RGGMDASPFQELASMAAPPPQHPHEEFNF-DCLSEVCNPYRSCGAQLVPSEAASQTQTQL 116
Query: 107 PSFPSAQEEYPPMVVEEDR--DQLCLRSSDHLHQNHSFEETKSSCAEIEQATSNITNQGF 164
A MV EE+ D+ L + +F E + + I +G
Sbjct: 117 TPLRDA------MVAEEETSGDKALLHGGGG-SSSPTFM-FGGGAGESSEMMAGI--RGV 166
Query: 165 NMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTI 224
G+ KL G PSKNLMAE LNDRLSMLRSIVPKISKMDRTSILGDTI
Sbjct: 167 GGGV-----HPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTI 221
Query: 225 DYLKELLERINKLQEEETELGANQL-LIGKFTELKS---NEASVRNSPKFDVERREI-DT 279
DY+KEL ERI L EEE + +L L+ + S NE VRNS KFDVE R +T
Sbjct: 222 DYVKELTERIKTL-EEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNT 280
Query: 280 RIDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIK 339
RI+ICC + PG+LLSTV+ LEVLGLEI+QCV+SCF+DF +QASC + +R ++S++EIK
Sbjct: 281 RIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIK 340
Query: 340 QALFSNAGYGGK 351
Q LF +AGYGG+
Sbjct: 341 QTLFRSAGYGGR 352
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 101/188 (53%), Positives = 128/188 (68%)
Query: 181 GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
G PSKNLMAE LNDRLSMLRS+VP+ISKMDRTSILGDTI Y+KEL++RI LQ E
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
Query: 241 -----ETELGANQLLIGKFTELK------SNEAS--VRNSPKFDVERREI-DTRIDICCS 286
+ L + K LK S E + +RNS +F+VERRE TRI++ C+
Sbjct: 252 AATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERRENGSTRIEMACA 311
Query: 287 SKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLL-SSEEIKQALFSN 345
+ P LL ST+ LE LG+EI+QCVISCF+DF++QASC + ++R + +EEIKQ LF +
Sbjct: 312 AIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRS 371
Query: 346 AGYGGKCL 353
AGYG CL
Sbjct: 372 AGYGDGCL 379
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 221 (82.9 bits), Expect = 9.8e-30, Sum P(3) = 9.8e-30
Identities = 47/66 (71%), Positives = 51/66 (77%)
Query: 175 KNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERI 234
K KK +G P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDYLKELL+RI
Sbjct: 298 KGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356
Query: 235 NKLQEE 240
N L E
Sbjct: 357 NDLHNE 362
Score = 162 (62.1 bits), Expect = 9.8e-30, Sum P(3) = 9.8e-30
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 267 SPKFDVERREIDTR------IDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQ 320
SPK R E+ R I + C +PGLLL+T+ L+ LGL++QQ VISCFN F+L
Sbjct: 403 SPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 462
Query: 321 ASCSEAAERRTLLSSEEIKQALFSNAGYGG 350
+E + + ++IK LF AGY G
Sbjct: 463 VFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492
Score = 40 (19.1 bits), Expect = 9.8e-30, Sum P(3) = 9.8e-30
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 63 SAAPSEASFECPPFTDHLHQGYHPFVDGF-TVPEVDTSSYTKNEIPSFPSAQEEYPP 118
SA P + +FE + L+Q + P GF ++ ++ + +P F SA+ P
Sbjct: 125 SANPFDNAFEFGSESGFLNQIHAPISMGFGSLTQLGNRDLSS--VPDFLSARSLLAP 179
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 224 (83.9 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 62/127 (48%), Positives = 78/127 (61%)
Query: 119 MVVEE-DRDQLCLRSSDHLHQNHSFEETKS---SCAEIEQ-ATSNITNQGFNMGLCVDRK 173
MV+++ D D L + +S L N+ E+ + S A+ E A S +T G
Sbjct: 279 MVLDDGDDDGLSIDASGGL--NYDSEDARGGEDSGAKKESNANSTVTGDG---------- 326
Query: 174 RKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLER 233
K KK +G P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD I+YLKELL++
Sbjct: 327 -KGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQK 384
Query: 234 INKLQEE 240
IN LQ E
Sbjct: 385 INDLQNE 391
Score = 154 (59.3 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 268 PKFDVERRE-IDTRIDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEA 326
P+ +V RE I + C+ +PGLLLS + +E LGL++QQ VISCFN F+L +E
Sbjct: 439 PRVEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNGFTLDIFKAEQ 498
Query: 327 AERRTLLSSEEIKQALFSNAGY 348
+ L EEIK L +AG+
Sbjct: 499 CKDGPGLLPEEIKAVLMQSAGF 520
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 189 (71.6 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 43/83 (51%), Positives = 55/83 (66%)
Query: 171 DRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKEL 230
D K K K +G +KNLMAE LNDRL LRS+VP+I+K+DR SILGD I+Y+KEL
Sbjct: 300 DPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKEL 359
Query: 231 LERINKLQEE-----ETELGANQ 248
+LQ+E ETE G+N+
Sbjct: 360 QNEAKELQDELEENSETEDGSNR 382
Score = 61 (26.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 259 SNEASVRNSPKFDVERREIDTR---IDICCSSKPGLLLSTVNTLEVLGLEI 306
SN+ P+ DV ++D R + + C KPG + L+ LGLE+
Sbjct: 419 SNDKGQEMEPQVDVA--QLDGREFFVKVICEYKPGGFTRLMEALDSLGLEV 467
>UNIPROTKB|Q5Z988 [details] [associations]
symbol:P0548E04.5 "Os06g0724800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 eggNOG:NOG245311
EMBL:AP003685 EMBL:AP007231 EMBL:AK063523 RefSeq:NP_001175006.1
UniGene:Os.11409 EnsemblPlants:LOC_Os06g50900.1 GeneID:9271931
KEGG:osa:9271931 Uniprot:Q5Z988
Length = 213
Score = 142 (55.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 163 GFNMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDR 216
GF+ +K K++EG PSKNLMAE LNDRLSMLRS+VPKISK+ R
Sbjct: 134 GFSAAAAAPASKK-KRVEGMPSKNLMAERRRRKRLNDRLSMLRSVVPKISKVYR 186
Score = 71 (30.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 1 MELTQHGFLEELLAPPIARRDAWSSFSGGLNEYLPSGWILDSLDE----SSTLAAAASNP 56
MEL + FLEEL + RRDAW + G + + P+ +D E ++T++ +
Sbjct: 1 MELDEQAFLEELFS---LRRDAWEYNAMG-DFFSPACAAMDGFQERHQSTTTVSVLPTFT 56
Query: 57 SSFVGFSAAPSEASFEC 73
+S+ AP+ A F+C
Sbjct: 57 ASYEQPPPAPA-AGFDC 72
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 88 VDGFTVPEVDTSSYTKNEIPSFPSAQEEYPP 118
+DGF E S+ T + +P+F ++ E+ PP
Sbjct: 36 MDGFQ--ERHQSTTTVSVLPTFTASYEQPPP 64
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 180 (68.4 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 57/190 (30%), Positives = 90/190 (47%)
Query: 172 RKRKNKKLEG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKE 229
RKR K G +P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ E
Sbjct: 401 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISE 460
Query: 230 LLERINKLQEEETELGANQLLIGKFT-ELKSN---------EASVRNSPKFDVERREIDT 279
L ++ K + ++ EL ++ K KS+ E+SV + DV+ D
Sbjct: 461 LKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDA 520
Query: 280 RIDICCSSK--PGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEE 337
I I CS + PG + L+ L LE+ +S ND +Q + + + + ++
Sbjct: 521 MIRIQCSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMIQQATVKMGNQ--FFTQDQ 576
Query: 338 IKQALFSNAG 347
+K AL G
Sbjct: 577 LKVALTEKVG 586
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 179 (68.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 56/194 (28%), Positives = 94/194 (48%)
Query: 172 RKRKNKKLEG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKE 229
RKR K G +P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ E
Sbjct: 400 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINE 459
Query: 230 LLERINKLQEEETEL----------GANQLLIG-KFTELKS-NEASVRNSPKFDVERREI 277
L ++ + + ++ E+ G N G + E KS N+ S +S + +++ + I
Sbjct: 460 LKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKII 519
Query: 278 --DTRIDICCSSK--PGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLL 333
D I + C K PG + L+ L LE+ +S ND +Q + + +
Sbjct: 520 GWDVMIRVQCGKKDHPGARF--MEALKELDLEVNHASLSVVNDLMIQQATVKMGSQ--FF 575
Query: 334 SSEEIKQALFSNAG 347
+ +++K AL + G
Sbjct: 576 NHDQLKVALMTKVG 589
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/168 (30%), Positives = 85/168 (50%)
Query: 175 KNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERI 234
K+K+L + +++AE LN++ LRS+VP ++KMD+ SILGDTI Y+ L +R+
Sbjct: 353 KDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRV 412
Query: 235 NKLQEEETELGANQLLIGKFTELKSNEASVRNSPKFDVERREIDTRIDICCSSKPGLLLS 294
++L+ E Q ++ + S + +V E D +++ C + GLLL
Sbjct: 413 HELENTHHE---QQ-------HKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLD 462
Query: 295 TVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQAL 342
+ L LG+E V + ND +A A R S E+K+A+
Sbjct: 463 ILQVLHELGIETT-AVHTSVNDHDFEAEI-RAKVRGKKASIAEVKRAI 508
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 143 EETKSSCAEIEQATSNITNQGFNMGLCVD----RKRKNKKLEG--QPSKNLMAEXXXXXX 196
+E SC E ++ S + G VD RKR K G +P ++ AE
Sbjct: 350 QEKSESCTE-KRPVSLLAGAGIVS--VVDEKRPRKRGRKPANGREEPLNHVEAERQRREK 406
Query: 197 LNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQLLIGKFTE 256
LN R LRS+VP ISKMD+ S+LGD I Y+KEL E++ K+ E+E +G ++ L
Sbjct: 407 LNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKV-KIMEDE-RVGTDKSLS----- 459
Query: 257 LKSNEASVRNSPKFDVE--RREIDTRIDICCSSKP 289
+SN +V SP+ D++ E+ R+ S P
Sbjct: 460 -ESNTITVEESPEVDIQAMNEEVVVRVISPLDSHP 493
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 55/185 (29%), Positives = 87/185 (47%)
Query: 172 RKRKNKKLEGQ--PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKE 229
+KR K G+ P ++ AE LN R LR++VP +SKMD+TS+L D + Y+ E
Sbjct: 328 KKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINE 387
Query: 230 LLERIN--KLQEEETELGANQL--LIGKFTELKS---NEASVRNSPKFDVERREID---T 279
L + +L++ E+ N+L + G+ + S E K +V+ E D
Sbjct: 388 LKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMV 447
Query: 280 RIDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIK 339
R++ PG L +N L L LE+ IS ND +Q + + R + EE++
Sbjct: 448 RVESRKDHHPGARL--MNALMDLELEVNHASISVMNDLMIQQANVKMGLR--IYKQEELR 503
Query: 340 QALFS 344
L S
Sbjct: 504 DLLMS 508
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 54/190 (28%), Positives = 91/190 (47%)
Query: 172 RKRKNKKLEG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKE 229
+KR K G +P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ E
Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 496
Query: 230 LLERINKLQEEETELGANQL------LIGKFTELKSNEASVR-NSPK---FDVERREI-- 277
L ++ K + E+ ++ NQL L G+ + S +S K ++E + I
Sbjct: 497 LKSKVVKTESEKLQI-KNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGW 555
Query: 278 DTRIDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEE 337
D I + S + ++ L L LE+ +S ND +Q + + R + + E+
Sbjct: 556 DAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFR--IYTQEQ 613
Query: 338 IKQALFSNAG 347
++ +L S G
Sbjct: 614 LRASLISKIG 623
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 46/174 (26%), Positives = 84/174 (48%)
Query: 182 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEE 241
Q ++++AE L+ R L IVP + KMD+ S+LGD I Y+K+L +++ L+EE
Sbjct: 178 QNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEA 237
Query: 242 TELGANQLLIGKFTELKSNEASVRNSPK-FDVERR-----EIDTRID-------ICCSSK 288
++ K ++L +++ + + FD EI+ R+ I C ++
Sbjct: 238 RRRPVEAAVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLVKIHCENR 297
Query: 289 PGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQAL 342
G L++ ++ +E +GL I + F SL + A LS ++I + L
Sbjct: 298 KGALITALSEVETIGLTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKKL 351
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 146 (56.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 184 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETE 243
SKN+++E LN RL LRS+VP ISK+D+ S++ D+IDY++EL+++ L+ E E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 244 LGANQLLI 251
L + L+
Sbjct: 113 LESRSTLL 120
Score = 40 (19.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 283 ICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQAL 342
I CS K ++ LE L L I + + F+ F+ + S + + LS I +L
Sbjct: 183 ITCSKKRETMVQLCKVLESLNLNI---LTTNFSSFTSRLSTTLFLQVTLSLSPSLI--SL 237
Query: 343 FSN 345
F N
Sbjct: 238 FGN 240
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 155 (59.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 45/189 (23%), Positives = 85/189 (44%)
Query: 172 RKRKNKKLEG--QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKE 229
RKR K G +P ++ AE LN R LR++VP +SKMD+ S+LGD I Y+ E
Sbjct: 509 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINE 568
Query: 230 LLERINKLQEEETELGANQLLIGKFTELK-------SNEASVR-NSPKFDVERREIDTRI 281
L ++ L+ ++ L + + K + + + R ++ + + + ++ I
Sbjct: 569 LRGKLTALETDKETLQSQMESLKKERDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMI 628
Query: 282 DICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQA 341
+ C + + L L L++ +S D +Q + A R + S +++ A
Sbjct: 629 RVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMASR--VYSQDQLNAA 686
Query: 342 LFSNAGYGG 350
L++ G
Sbjct: 687 LYTRIAEPG 695
>TAIR|locus:2078411 [details] [associations]
symbol:AT3G56220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
SMART:SM00353 GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL163763 ProtClustDB:CLSN2693906 OMA:HAESETS
HOGENOM:HOG000241360 EMBL:BT004764 EMBL:AK228035 IPI:IPI00541566
PIR:T47739 RefSeq:NP_191181.1 UniGene:At.34957
ProteinModelPortal:Q9LYM0 SMR:Q9LYM0 IntAct:Q9LYM0 PRIDE:Q9LYM0
EnsemblPlants:AT3G56220.1 GeneID:824788 KEGG:ath:AT3G56220
TAIR:At3g56220 eggNOG:NOG276705 InParanoid:Q9LYM0 PhylomeDB:Q9LYM0
Genevestigator:Q9LYM0 Uniprot:Q9LYM0
Length = 156
Score = 127 (49.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 190 EXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQL 249
E L ++ +LRSI ++ + TSI+ D Y+K+L +++ K+ T
Sbjct: 5 EHKRGSSLREKFHLLRSITDSHAESE-TSIIVDASKYIKKLKQKVEKINNATT------- 56
Query: 250 LIGKFTELKSNEASVRNSPKFDVERREIDTRIDICC-SSKPGLLLSTVNTLEVLGLEIQQ 308
+E E+S N P VE E I + ++ G+L+ + T E LGL++ +
Sbjct: 57 -----SEQSFRESSDPN-PMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVE 110
Query: 309 CVISCFNDFSLQASCSEAAERRTLLSSEEIKQAL 342
+SC + FSL A S + + +E +KQA+
Sbjct: 111 ARVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAV 144
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 144 (55.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 182 QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
Q KNL AE LN L LRS+VP I+KMDR SILGD IDY+ L +++ +LQ+E
Sbjct: 282 QQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDE 340
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/79 (15%), Positives = 34/79 (43%)
Query: 265 RNSPKFDVERRE-IDTRIDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASC 323
R P+ +V + + + + + KPG + ++ + LGLE+ ++ + L
Sbjct: 413 RMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFR 472
Query: 324 SEAAERRTLLSSEEIKQAL 342
+ + ++ ++ +L
Sbjct: 473 VMVRDSEVAVQADRVRDSL 491
>TAIR|locus:2828302 [details] [associations]
symbol:AT2G40435 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002336 EMBL:AC007020
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 EMBL:AY227635
EMBL:AY649272 EMBL:AK220685 IPI:IPI00531488 RefSeq:NP_565932.1
UniGene:At.37051 ProteinModelPortal:Q8RUZ5 SMR:Q8RUZ5 PRIDE:Q8RUZ5
EnsemblPlants:AT2G40435.1 GeneID:818637 KEGG:ath:AT2G40435
TAIR:At2g40435 HOGENOM:HOG000241360 InParanoid:Q8RUZ5
PhylomeDB:Q8RUZ5 ArrayExpress:Q8RUZ5 Genevestigator:Q8RUZ5
Uniprot:Q8RUZ5
Length = 158
Score = 125 (49.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/147 (25%), Positives = 73/147 (49%)
Query: 197 LNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQLLIGKFTE 256
L ++ +LRSI ++ D TSI+ D Y+++L +++ + ++ T E
Sbjct: 11 LQEKFQLLRSITNSHAEND-TSIIMDASKYIQKLKQKVERFNQDPT------------AE 57
Query: 257 LKSNEASVRNSPKFDVERREIDTRIDICCS-SKPGLLLSTVNTLEVLGLEIQQCVISCFN 315
S+E + +P VE + I++ ++PG+L+S + E +GL + + SC +
Sbjct: 58 QSSSEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTD 117
Query: 316 DFSLQASCSEAAERRTLLSSEEIKQAL 342
FSL A E + + +E +KQA+
Sbjct: 118 SFSLHAMGLENEDGENM-DAEAVKQAV 143
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 142 (55.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 39/148 (26%), Positives = 75/148 (50%)
Query: 185 KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEE--T 242
++++AE L+++ L +++P + K D+ +IL D I +K+L E++ L+EE+ T
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEAT 178
Query: 243 ELGANQLLIGKFTELKSNEASVRNSP----KFDVERREIDTRID-------ICCSSKPGL 291
+ +L+ K E ++ SP +FD EI+ +I I C G
Sbjct: 179 RQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGC 238
Query: 292 LLSTVNTLEVLGLEIQQCVISCFNDFSL 319
+++ +NT+E L I+ ++ F D +L
Sbjct: 239 MINILNTIENFQLRIENSIVLPFGDSTL 266
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 133 (51.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 45/175 (25%), Positives = 82/175 (46%)
Query: 186 NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELG 245
+++AE L R L ++VP + KMD+ S+LGD + ++K L ER+ +L+E++ E
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 212
Query: 246 ANQLLIGKFTEL--KSNEASVRNS----------PKFDVERREIDTRIDICCSSKPGLLL 293
+++ K ++L N S +S P+ +V + D I I C + G L
Sbjct: 213 LESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLA 272
Query: 294 STVNTLEVLGLEIQQCVISCFN---DFSLQASCSEAAERRTLLSSEEIKQALFSN 345
+ +E L + I + F D ++ A E+ TL+ + ++ SN
Sbjct: 273 KIMAEIEKLHILITNSSVLNFGPTLDITIIAK-KESDFDMTLMDVVKSLRSALSN 326
Score = 49 (22.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 18/63 (28%), Positives = 24/63 (38%)
Query: 100 SYTKNEIPSFPSAQEEYPPMVVEEDRDQLCLRSSDHLHQN----HSFEETKSSCAEIEQA 155
S+T N PS+ E PP ++E + S HL N H + S E
Sbjct: 42 SFTTNNDPSYDDLIEMKPPKILETTY----ISPSSHLPPNSKPHHIHRHSSSRILSFEDY 97
Query: 156 TSN 158
SN
Sbjct: 98 GSN 100
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 140 (54.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 35/140 (25%), Positives = 69/140 (49%)
Query: 181 GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
G +++AE +N R L +++P + KMD+ +ILGD + Y+KEL E++ L+EE
Sbjct: 163 GYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE 222
Query: 241 ETELGANQLLIGKFTELKSNEASVRNS------PKFDVERREIDTRIDICCSSKPGLLLS 294
+ G ++ + + +++ + P+ +V E + + C + GLL+
Sbjct: 223 DGG-GRPAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVR 281
Query: 295 TVNTLEVLGLEIQQCVISCF 314
++ +E L L I + F
Sbjct: 282 LLSEVEELRLGITHTSVMPF 301
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 139 (54.0 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 48/178 (26%), Positives = 83/178 (46%)
Query: 79 HLHQGYHPFVDGFTVPEVDTSSYTKNEIPSFPSAQEEYPPMVVEEDRDQLCLRSSDHLHQ 138
+L +G H +D V + D + P F + ++ P V++ D+L S+
Sbjct: 30 NLIRGDHQTIDENPVLDFDLGPLQNS--PCFID-ENQFIPTPVDDLFDELPDLDSNVAES 86
Query: 139 NHSFEETKSSCAEIEQATSNITNQGFNMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLN 198
SF+ S A E+ + N G + +K + S+ L++E +
Sbjct: 87 FRSFDGD-SVRAGGEEDEEDY-NDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMK 144
Query: 199 DRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQLLIGKFTE 256
D+L LRS+VP I+KMD+ SI+GD + Y++EL + KL+ + L A+ G + E
Sbjct: 145 DKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQE 202
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 93 VPEVDTSSYTKNEIPSFPSAQEEYPPMVVEEDRDQLCLRSSDHLHQNHSFEETKSSCAEI 152
VP D + +P S+Q PP ++ D R+S+ N+S E A+
Sbjct: 355 VPSTDEFKF----LPLQQSSQRLLPPAQMQIDFSAASSRASE----NNSDGEGGGEWADA 406
Query: 153 EQATSNITNQGFNMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKIS 212
A + N+ G R+ N + E ++ AE LN R LRS+VP IS
Sbjct: 407 VGADESGNNRPRKRG----RRPANGRAEAL--NHVEAERQRREKLNQRFYALRSVVPNIS 460
Query: 213 KMDRTSILGDTIDYLKELLERINKLQEEETELG 245
KMD+ S+LGD + Y+ EL ++ ++ E LG
Sbjct: 461 KMDKASLLGDAVSYINELHAKLKVMEAERERLG 493
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/160 (28%), Positives = 81/160 (50%)
Query: 147 SSCAEI---EQATSNITNQGFNMGLC-VDRKRKNKKL---EGQPSKNLMAEXXXXXXLND 199
+SC EI EQ I N+ ++ + + + NKKL E SKNL +E +N
Sbjct: 219 ASCVEILREEQTPCLIMNKEKDVVVQNANDSKANKKLLPTENFKSKNLHSERKRRERINQ 278
Query: 200 RLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEE---TELGANQLLIGKFTE 256
+ LR++VPKI+K+++ I D +DY+ ELL KL++E E+ ++ + +
Sbjct: 279 AMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEMECKEIAAEEQSA 338
Query: 257 LKSNEASVRNSPKFDVERREIDTRIDICCSSKPGLLLSTV 296
+ EA R S K + ++ + +I++ + + L+ V
Sbjct: 339 IADPEAE-RVSSKSNKRVKKNEVKIEVHETGERDFLIRVV 377
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/179 (25%), Positives = 78/179 (43%)
Query: 162 QGFNMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILG 221
Q +G+ + + ++++AE L + L +IVP + K D+ S+LG
Sbjct: 264 QDDGVGVFQQPPERRSRPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLG 323
Query: 222 DTIDYLKELLERINKLQE------EETELGANQLLI-------GKFTELKSNEASVRNSP 268
TIDY+K+L E++ L+E E T ++ I G + + +S +SP
Sbjct: 324 STIDYVKQLEEKVKALEEGSRRTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSP 383
Query: 269 KFDVERREIDTRIDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAA 327
+ + ICC + GLL+ ++ LE GL I + F D L + + A
Sbjct: 384 TVEASIHGNTVLLKICCKERRGLLVMILSELEKQGLSIINTSVVPFTDSCLNITITAKA 442
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 131 (51.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 37/150 (24%), Positives = 69/150 (46%)
Query: 172 RKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELL 231
R + + + +++AE L R L +++P + KMD+ S+LGD I ++K L
Sbjct: 113 RAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
Query: 232 ERINKLQEEETELGANQLLIGKFTELKSNE---------------ASVRNSPKFDVERRE 276
E + + +E++ E +++ K + L +E +S N P+ +V
Sbjct: 173 ESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSG 232
Query: 277 IDTRIDICCSSKPGLLLSTVNTLEVLGLEI 306
D I I C + G ++ + +E LGL I
Sbjct: 233 KDVLIKILCEKQKGNVIKIMGEIEKLGLSI 262
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 77 TDHLHQGYHPFVD---GFTVPEV-DTSSYTKNEIPSF--PSAQEEYPPMVVEEDRDQLCL 130
++H GY FV+ T P++ ++ +P F PS Q+ +++ +
Sbjct: 104 SNHWDNGYQDFVNLGPNHTTPDLLSLLQLPRSSLPPFANPSIQD----IIMTTSSS---V 156
Query: 131 RSSDHL-HQNHSFEETKSSCAEIEQATSNITNQGFNMGLCVDRKRKN------KKLEGQP 183
+ D L H N + S ++Q + TNQG N L D + N +K G
Sbjct: 157 AAYDPLFHLNFPLQPPNGSFMGVDQDQTE-TNQGVN--LMYDEENNNLDDGLNRKGRGSK 213
Query: 184 SKNLM-AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQ 238
+ + E DR L++++P +K DR SI+G+ IDY+KELL I++ +
Sbjct: 214 KRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFK 269
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 51/183 (27%), Positives = 89/183 (48%)
Query: 175 KN-KKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPK--ISKMDRTSILGDTIDYLKELL 231
KN +++E Q ++ E +N L+ LRSI+P I + D+ SI+G ID++K L
Sbjct: 183 KNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILE 242
Query: 232 ERINKL--QEEETELGANQLLIGKFTELK---SNEASVRN----SPKFDVERREIDTRID 282
+++ L Q+ + N+ I + L+ SN+ N S K +E I++ ++
Sbjct: 243 QQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVN 302
Query: 283 --ICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLL-SSEEIK 339
I C+ K G LL ++ LE L + I+ + S+ S + E L S++EI
Sbjct: 303 LKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEIT 362
Query: 340 QAL 342
A+
Sbjct: 363 AAI 365
>UNIPROTKB|Q8LII5 [details] [associations]
symbol:OJ1167_G06.116 "Putative uncharacterized protein
OJ1167_G06.116" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 EMBL:AP003817 EMBL:AK242001
EnsemblPlants:LOC_Os07g47960.1 OMA:HAESETS Uniprot:Q8LII5
Length = 157
Score = 112 (44.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 190 EXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQL 249
E L+++L +LRSI + + TSI+ D +Y+KEL +++ +L +E +
Sbjct: 5 ERKKAAALHEKLQILRSITHSHA-LSNTSIITDASEYIKELKQKVVRLNKE--------I 55
Query: 250 LIGKFTELKSNEASVRNSPKFDVERREIDTRIDICCS-SKPGLLLSTVNTLEVLGLEIQQ 308
+ L+ N S+ P VE I++ S PGLL+S + + LGL + +
Sbjct: 56 ACAEAAALRQN--SI---PTVTVETLGHGFLINVFSDKSCPGLLVSILEAFDELGLNVLE 110
Query: 309 CVISCFNDFSLQA 321
SC + F L+A
Sbjct: 111 ATASCDDTFRLEA 123
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 35/103 (33%), Positives = 59/103 (57%)
Query: 144 ETKSSCAEIEQATSNITNQGFNMGLCVDRKRKNKKLEG---QP---SKNLMAEXXXXXXL 197
+TK++ E + N +NQ +M V KRK+ G +P ++++AE L
Sbjct: 89 DTKTNPVE---TSLNFSNQ-VSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKL 144
Query: 198 NDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
N+RL L +++P + K D+ ++L D I +LK+L ER+ KL+EE
Sbjct: 145 NERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 117 (46.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 183 PSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
P ++ AE LN R LR+ VP +S+MD+ S+L D +DY+ EL R+ +L+ E
Sbjct: 92 PIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAE 149
Score = 43 (20.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 34 LPSGWIL----DSLDE---SSTLAAAASNPSS 58
+P W+L D LD+ +S LAAAA++ S+
Sbjct: 27 VPDQWLLGLGHDELDKDAAASALAAAAASQSA 58
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 107 (42.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 32/112 (28%), Positives = 62/112 (55%)
Query: 189 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQ 248
AE +N L+ LR++VP S+MD+ ++LG+ + +++EL R ++ TE GA+
Sbjct: 26 AERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRA----DDATE-GADV 80
Query: 249 LLIGKFTEL----KSNEASVRNSPKFDV---ERR-EIDTRIDICCSSKPGLL 292
++ G+ E+ + ++ R+ + V +RR R +CC+ +PGL+
Sbjct: 81 VVPGEGDEVGVEDEDDDEGERDEGCYVVGGGDRRWRRRVRAWVCCADRPGLM 132
Score = 51 (23.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 298 TLEVLGLEIQQCVISCFNDFSLQASCSEAAERRTLLSSEEIKQALFSNAGYGGK 351
T VL L++ + ND ++ S AA R LL+ EE+ A + A G K
Sbjct: 158 TRSVLELDVVVASDAADNDRAVALSALRAALRTVLLNREELLAAAAAAATDGYK 211
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 174 RKNKKLEGQPSK---NLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKEL 230
+K + L P + + ++E LN+R LRSI+P ISK+D+ SIL DTI+YL++L
Sbjct: 391 KKEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDL 450
Query: 231 LERINKLQ 238
+R+ +L+
Sbjct: 451 QKRVQELE 458
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 121 (47.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 180 EGQPSKN-LMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKL- 237
+G KN +M+E L + +L+S+VP I K+D+ SIL +TI YLKEL +R+ +L
Sbjct: 238 QGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELE 297
Query: 238 ---QEEETELGANQLLIGKFT--ELKSNEASVRNSPK---FDVERREIDTRIDICCSSKP 289
Q + + K T ++ + + R +P D ERR + +++
Sbjct: 298 SSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMDNK 357
Query: 290 GLLLST-VNTLEVLGLEIQQCVISCFND-FSLQASCSE 325
LLL E+L + + D S+QAS S+
Sbjct: 358 ELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSD 395
Score = 46 (21.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 21 DAWSSFSGGLNEYLPSGWILDSLDESSTLAAAA------SNPSSFVGFSAAPSEASFECP 74
D WSSF + +P+ D +D++ A A +PSSFV + P +
Sbjct: 148 DPWSSF-----QLVPTAEATD-VDDAVVAALGAIDGSCRPSPSSFVAWKRTPDSDEVQAV 201
Query: 75 P 75
P
Sbjct: 202 P 202
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 122 (48.0 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 43/182 (23%), Positives = 89/182 (48%)
Query: 174 RKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPK--ISKMDRTSILGDTIDYLKELL 231
+ N+++E Q ++ E +N+ ++ LR+++P I + D+ SI+G I+Y+K L
Sbjct: 168 KNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLE 227
Query: 232 ERINKLQEEE-TELGANQLLI----GKFTELKSNE--ASVRNS---PKFDVERREIDTRI 281
+ I L+ ++ T+ +N ++ + + SN+ ++ + PK + + +
Sbjct: 228 QIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSL 287
Query: 282 DICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAERRT-LLSSEEIKQ 340
+ C K G LL + +LE L L + I+ + S+ S + E L S++EI
Sbjct: 288 KVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITA 347
Query: 341 AL 342
A+
Sbjct: 348 AV 349
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 37/167 (22%), Positives = 75/167 (44%)
Query: 185 KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETEL 244
++++AE +N R L +++PK+ KMD+ +IL D Y++EL E++ L+E+
Sbjct: 130 EHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAAR 189
Query: 245 GANQLLIGKFTELKSNEASVRNSPKFDVERREIDT--RIDICCSSKPGLLLSTVNTLEVL 302
+ N V P+ +V + + I C + G+++ + +E +
Sbjct: 190 VTEAAMATPSPARAMNHLPV--PPEIEVRCSPTNNVVMVRIHCENGEGVIVRILAEVEEI 247
Query: 303 GLEIQQCVISCFNDFSLQASCSEAAE---RRTLLSSEEIKQALFSNA 346
L I + F D + AA+ R+ + ++++Q F A
Sbjct: 248 HLRIINANVMPFLDQGATMIITIAAKAKINRSEVKVQDLEQDRFEKA 294
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 125 (49.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 146 KSSCAEIEQATSNITNQGFNMGLCVDRKR---KNKKLEGQPS------KNLMAEXXXXXX 196
KSS + AT +QG + D R K K + P + + E
Sbjct: 393 KSSSSSSGTATVTAPSQGMLKKIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRREK 452
Query: 197 LNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQE--EETE 243
LN+R LR I+P I+K+D+ SIL DTI+YL+EL R+ +L+ E T+
Sbjct: 453 LNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTD 501
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 281 IDICCSSKPGLLLSTVNTLEVLGLEIQQCVISCFND--FSLQASCSEAAERRTLLSSEEI 338
I++ C+ + G+LL ++ + L L+ V S D L +C + + + I
Sbjct: 570 IELRCAWREGVLLEIMDVISDLHLD-SHSVQSSTGDGLLCLTVNCKHKGSK--IATPGMI 626
Query: 339 KQAL 342
K+AL
Sbjct: 627 KEAL 630
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 181 GQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKEL-LERINKLQE 239
G +KN++ E LN++L LRS+VP I+KMD+ SI+ D I+Y++ L E L+E
Sbjct: 89 GGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLRE 148
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 184 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
SKN+ E LN++L LR++VPKI+KMD+ SI+ D I ++++L E +L +E
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDE 152
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 185 KN-LMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQ 238
KN +M+E LN+ +L+S+VP I K+D+ SIL +TI YLKEL R+ +L+
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELE 241
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 120 (47.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 44/173 (25%), Positives = 79/173 (45%)
Query: 172 RKRKNKKLEGQPS--KNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKE 229
RKR K G+ ++ AE LN R LR++VP ISKMD+ S+L D I Y+ +
Sbjct: 305 RKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITD 364
Query: 230 LLERINKLQEEETELGANQLLIGKFTELKSNEASVRNSPKFDVERREIDTRIDICCSSKP 289
+ ++I ++ E E ++ +K E++ + D ++R D + + C +
Sbjct: 365 MQKKI-RVYETEKQI------------MKRRESNQITPAEVDYQQRHDDAVVRLSCPLET 411
Query: 290 GLLLSTVNTL---EVLGLEIQQCVIS--CFNDFSL--QASCSEAAERRTLLSS 335
+ + TL EV+ + + + F+L Q C+ + LL+S
Sbjct: 412 HPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQLKDKLLAS 464
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 47 STLAAAASNPSSFVGFSAAPSEA--SFECPPFTDHLHQGYHPFVDG 90
ST+ + A + F+ ++A + A PP +L QG V+G
Sbjct: 17 STIGSEACD--FFISTASASNTALSKLVSPPSDSNLQQGLRHVVEG 60
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 109 (43.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 172 RKRKNK-KLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPK--ISKMDRTSILGDTIDYLK 228
R KNK ++E Q ++ E +N+ L+ LRS++P + + D+ SI+G ID++K
Sbjct: 102 RAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIK 161
Query: 229 ELLERINKLQEEETELGANQ 248
EL + + L+ E+ + G ++
Sbjct: 162 ELEQLLQSLEAEKRKDGTDE 181
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 271 DVERREIDTRIDICCSSKPGL--LLSTVNTLEVLGLEIQQCVISCFNDFSLQASCSEAAE 328
+VE I + + K G +L + ++E L L I IS DF + + + +
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282
Query: 329 RRTLLSSEEIKQAL 342
L S++EI A+
Sbjct: 283 GCKLGSADEIATAV 296
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 184 SKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEE 240
SKNL AE LN + LR++VPKI+KM + + L D I+++K L + +LQ +
Sbjct: 64 SKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQ 120
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 109 (43.4 bits), Expect = 0.00083, P = 0.00083
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 189 AEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKLQEEETELGANQ 248
AE +N L LR +VP S+MD+ ++LG+ + Y++ KL+ E G+
Sbjct: 35 AERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVR-------KLRSEAA--GSAA 85
Query: 249 LLIGKFTELKSNEASVR-NSPKFDVERREIDTRI--DICCSSKPGLL 292
++ G+ E+ E V D R+ R+ +CC+ +PGL+
Sbjct: 86 VVPGEGDEVVVEEEEVEVEGCSCDAGERQAARRVKASVCCADRPGLM 132
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 157 SNITNQGFNMGLCVDRKRKNKKLEG-QPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMD 215
+N N GF + +K G + S+ E NDR L++++P +K+D
Sbjct: 218 ANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKID 277
Query: 216 RTSILGDTIDYLKELLERINKLQEEETELGANQLLIGKFTELKSNEASVRNSPKFDVERR 275
R SI+G+ IDY+KELL I EE ++ + G+F K A V + +
Sbjct: 278 RASIVGEAIDYIKELLRTI-----EEFKMLVEKKRCGRFRSKK--RARVGEGGGGEDQEE 330
Query: 276 EIDT 279
E DT
Sbjct: 331 EEDT 334
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 57/268 (21%), Positives = 107/268 (39%)
Query: 45 ESSTLAAAASNPSSFVGFSAAPSEASFECPPFTDHLHQGYHPFVDGFTVPEVDTSSYTKN 104
+S TL A+ + S F FS + PP T P D F P +S+ +
Sbjct: 47 QSETLGASGNVGSGFTIFSQDSVSPIWSLPPPTS-----IQPPFDQFPPPSSSPASFYGS 101
Query: 105 EIPSFPSAQEEYPPMVVEEDRDQLCLRSSDHLHQNHSFEETKSSCAEIEQATSNITNQGF 164
F ++ + + + ++ H H+ + + QA S
Sbjct: 102 ---FFNRSRAHHQGLQFGYEGFGGATSAAHHHHEQ--LRILSEALGPVVQAGSGPFGLQA 156
Query: 165 NMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTI 224
+G ++ + K + AE +N+ L+ LRSI+P +K D+ S+L + I
Sbjct: 157 ELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVI 216
Query: 225 DYLKELLERINKLQEEETELGANQLLIGKFTELKSNEASVRNSPKFDVERREIDTRIDIC 284
++KEL + ET + + L+ TE S+E +V + + + + +C
Sbjct: 217 QHVKEL--------KRETSVISETNLVP--TE--SDELTVAFTEEEETGDGRFVIKASLC 264
Query: 285 CSSKPGLLLSTVNTLEVLGLEIQQCVIS 312
C + LL + TL+ + L+ + I+
Sbjct: 265 CEDRSDLLPDMIKTLKAMRLKTLKAEIT 292
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 353 347 0.00098 116 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 603 (64 KB)
Total size of DFA: 225 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.48u 0.12s 34.60t Elapsed: 00:00:02
Total cpu time: 34.48u 0.12s 34.60t Elapsed: 00:00:02
Start: Sat May 11 04:29:02 2013 End: Sat May 11 04:29:04 2013