Query 038391
Match_columns 186
No_of_seqs 114 out of 1650
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 18:12:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038391.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038391hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 99.9 5.3E-24 1.8E-28 167.9 11.4 139 17-184 3-144 (191)
2 2plw_A Ribosomal RNA methyltra 99.8 1.1E-20 3.7E-25 147.7 13.4 140 18-184 1-159 (201)
3 2nyu_A Putative ribosomal RNA 99.8 3.5E-20 1.2E-24 144.0 11.3 143 18-184 1-150 (196)
4 3gcz_A Polyprotein; flavivirus 99.8 3.1E-20 1.1E-24 154.0 8.3 133 17-185 69-209 (282)
5 3evf_A RNA-directed RNA polyme 99.8 1E-19 3.5E-24 150.7 10.3 133 17-185 53-192 (277)
6 2px2_A Genome polyprotein [con 99.8 1.4E-19 4.8E-24 148.3 10.2 129 17-182 52-186 (269)
7 1ej0_A FTSJ; methyltransferase 99.8 4.1E-18 1.4E-22 128.5 13.3 140 18-184 1-141 (180)
8 3eld_A Methyltransferase; flav 99.8 1.3E-18 4.3E-23 145.3 10.5 133 17-185 60-199 (300)
9 2p41_A Type II methyltransfera 99.8 4E-18 1.4E-22 143.5 11.7 125 18-183 62-195 (305)
10 2oxt_A Nucleoside-2'-O-methylt 99.8 3.4E-18 1.2E-22 141.4 10.4 122 18-181 54-187 (265)
11 2wa2_A Non-structural protein 99.7 1.2E-17 4E-22 139.0 10.2 122 18-181 62-195 (276)
12 4hg2_A Methyltransferase type 99.7 9.2E-18 3.1E-22 138.1 8.1 133 3-181 4-137 (257)
13 3p8z_A Mtase, non-structural p 99.7 5E-16 1.7E-20 125.9 12.9 129 17-184 57-191 (267)
14 4df3_A Fibrillarin-like rRNA/T 99.6 9.7E-16 3.3E-20 124.7 7.8 123 18-179 51-182 (233)
15 2p7i_A Hypothetical protein; p 99.6 5.8E-16 2E-20 123.2 5.9 132 7-182 10-144 (250)
16 3hp7_A Hemolysin, putative; st 99.6 4.2E-15 1.4E-19 124.5 9.8 119 18-178 64-184 (291)
17 4gek_A TRNA (CMO5U34)-methyltr 99.6 5.5E-15 1.9E-19 121.6 9.7 106 37-181 68-180 (261)
18 3id6_C Fibrillarin-like rRNA/T 99.6 1.6E-15 5.5E-20 123.3 5.8 106 37-181 74-183 (232)
19 1pjz_A Thiopurine S-methyltran 99.5 2.3E-15 8E-20 118.7 4.6 103 37-179 20-140 (203)
20 3ege_A Putative methyltransfer 99.5 6.1E-15 2.1E-19 120.1 7.2 102 37-182 32-133 (261)
21 3lkz_A Non-structural protein 99.5 2.2E-14 7.7E-19 119.5 10.4 127 18-182 74-207 (321)
22 3dtn_A Putative methyltransfer 99.5 1.9E-14 6.7E-19 114.4 9.7 142 1-182 1-151 (234)
23 2gb4_A Thiopurine S-methyltran 99.5 1.1E-14 3.7E-19 119.2 7.9 104 37-180 66-192 (252)
24 3mti_A RRNA methylase; SAM-dep 99.5 4E-15 1.4E-19 114.6 4.8 114 37-183 20-139 (185)
25 3ou2_A SAM-dependent methyltra 99.5 3.1E-14 1E-18 111.5 9.9 114 27-182 34-149 (218)
26 3eey_A Putative rRNA methylase 99.5 1.9E-14 6.5E-19 111.8 7.3 117 37-183 20-143 (197)
27 3dli_A Methyltransferase; PSI- 99.5 1.1E-14 3.8E-19 116.7 6.0 111 32-183 34-144 (240)
28 1nkv_A Hypothetical protein YJ 99.5 3.8E-14 1.3E-18 114.0 8.9 102 36-180 33-141 (256)
29 2xyq_A Putative 2'-O-methyl tr 99.5 1.6E-14 5.6E-19 120.9 6.9 111 36-185 60-177 (290)
30 3ujc_A Phosphoethanolamine N-m 99.5 2.6E-14 9E-19 115.1 7.5 107 37-183 53-163 (266)
31 1ixk_A Methyltransferase; open 99.5 2.5E-14 8.5E-19 120.5 7.5 115 37-180 116-247 (315)
32 3pfg_A N-methyltransferase; N, 99.5 2.9E-14 1E-18 115.6 7.6 104 38-181 49-153 (263)
33 3e23_A Uncharacterized protein 99.5 1.1E-14 3.7E-19 114.4 4.4 108 34-183 38-145 (211)
34 3l8d_A Methyltransferase; stru 99.5 5.4E-14 1.8E-18 112.1 8.5 103 37-182 51-156 (242)
35 1wzn_A SAM-dependent methyltra 99.5 8.1E-14 2.8E-18 112.0 9.5 103 37-180 39-146 (252)
36 3ofk_A Nodulation protein S; N 99.5 2.5E-14 8.6E-19 112.5 6.1 114 27-181 39-156 (216)
37 3f4k_A Putative methyltransfer 99.5 8.2E-14 2.8E-18 112.1 9.1 109 29-180 36-151 (257)
38 3e8s_A Putative SAM dependent 99.5 2.9E-14 1E-18 111.9 5.5 105 38-182 51-155 (227)
39 3m4x_A NOL1/NOP2/SUN family pr 99.5 2.5E-14 8.7E-19 126.4 5.6 116 37-180 103-235 (456)
40 3kkz_A Uncharacterized protein 99.5 9.3E-14 3.2E-18 113.0 8.5 109 30-181 37-152 (267)
41 1vl5_A Unknown conserved prote 99.5 2.8E-14 9.6E-19 115.5 5.3 112 27-182 26-143 (260)
42 3mgg_A Methyltransferase; NYSG 99.5 7.5E-14 2.6E-18 113.8 7.3 114 26-180 24-143 (276)
43 3g5t_A Trans-aconitate 3-methy 99.5 8.7E-14 3E-18 115.2 7.8 119 26-180 24-150 (299)
44 3fpf_A Mtnas, putative unchara 99.5 2.3E-13 8E-18 114.2 10.3 109 27-182 110-225 (298)
45 3bus_A REBM, methyltransferase 99.5 2.9E-13 1E-17 109.9 10.7 105 36-182 58-169 (273)
46 3g5l_A Putative S-adenosylmeth 99.5 1.3E-13 4.3E-18 111.1 8.2 101 38-180 43-146 (253)
47 1nt2_A Fibrillarin-like PRE-rR 99.5 5.3E-14 1.8E-18 111.9 5.9 103 37-179 55-161 (210)
48 3dh0_A SAM dependent methyltra 99.5 8.1E-14 2.8E-18 109.6 6.8 113 30-183 29-147 (219)
49 2yqz_A Hypothetical protein TT 99.5 3.9E-14 1.3E-18 114.1 5.0 101 35-178 35-140 (263)
50 3m6w_A RRNA methylase; rRNA me 99.5 3.6E-14 1.2E-18 125.7 5.2 115 37-180 99-230 (464)
51 3dlc_A Putative S-adenosyl-L-m 99.5 1.6E-13 5.4E-18 107.1 8.3 102 37-181 42-150 (219)
52 3bxo_A N,N-dimethyltransferase 99.4 1.2E-13 4.2E-18 109.6 7.3 105 38-182 39-144 (239)
53 3r24_A NSP16, 2'-O-methyl tran 99.4 9.7E-14 3.3E-18 115.7 6.7 111 37-185 107-223 (344)
54 3vc1_A Geranyl diphosphate 2-C 99.4 1.4E-13 4.7E-18 114.9 7.7 104 37-183 115-225 (312)
55 3h2b_A SAM-dependent methyltra 99.4 6.1E-14 2.1E-18 109.3 5.1 104 40-184 42-146 (203)
56 3hem_A Cyclopropane-fatty-acyl 99.4 6E-13 2.1E-17 110.2 11.4 110 36-183 69-187 (302)
57 3opn_A Putative hemolysin; str 99.4 3.6E-13 1.2E-17 109.0 9.4 121 17-179 15-137 (232)
58 3g07_A 7SK snRNA methylphospha 99.4 1.1E-13 3.8E-18 114.8 6.5 112 38-179 45-220 (292)
59 2p35_A Trans-aconitate 2-methy 99.4 1.4E-13 4.6E-18 110.8 6.8 103 37-181 31-134 (259)
60 2frx_A Hypothetical protein YE 99.4 8.8E-14 3E-18 123.6 6.2 115 39-181 117-248 (479)
61 3lpm_A Putative methyltransfer 99.4 9.7E-14 3.3E-18 113.0 5.9 119 32-179 41-176 (259)
62 2o57_A Putative sarcosine dime 99.4 3.5E-13 1.2E-17 111.1 9.2 105 36-182 79-190 (297)
63 3evz_A Methyltransferase; NYSG 99.4 4.6E-13 1.6E-17 106.3 9.5 118 35-182 51-182 (230)
64 3iv6_A Putative Zn-dependent a 99.4 5.3E-14 1.8E-18 116.1 4.0 107 36-182 42-151 (261)
65 2ipx_A RRNA 2'-O-methyltransfe 99.4 8.7E-14 3E-18 111.3 5.0 106 37-181 75-184 (233)
66 1sqg_A SUN protein, FMU protei 99.4 7E-13 2.4E-17 115.9 11.1 116 37-180 244-375 (429)
67 1xxl_A YCGJ protein; structura 99.4 9.8E-14 3.3E-18 111.4 5.2 103 37-182 19-127 (239)
68 2esr_A Methyltransferase; stru 99.4 1.7E-13 5.8E-18 104.6 6.3 114 30-185 22-144 (177)
69 3gu3_A Methyltransferase; alph 99.4 2.3E-13 7.9E-18 112.1 7.4 110 31-181 14-128 (284)
70 4fsd_A Arsenic methyltransfera 99.4 9.7E-14 3.3E-18 119.5 5.2 112 37-182 81-206 (383)
71 3ajd_A Putative methyltransfer 99.4 1.5E-13 5.3E-18 113.2 6.1 119 37-180 81-212 (274)
72 1ri5_A MRNA capping enzyme; me 99.4 2.2E-13 7.6E-18 111.5 7.0 108 37-181 62-176 (298)
73 4htf_A S-adenosylmethionine-de 99.4 1.8E-13 6.1E-18 112.3 6.4 102 38-181 67-175 (285)
74 3orh_A Guanidinoacetate N-meth 99.4 4.1E-14 1.4E-18 114.2 2.2 105 38-177 59-168 (236)
75 3hnr_A Probable methyltransfer 99.4 1.5E-13 5.2E-18 108.1 5.4 101 38-180 44-146 (220)
76 4dzr_A Protein-(glutamine-N5) 99.4 2.1E-13 7.3E-18 106.1 6.1 86 30-123 21-111 (215)
77 2yxl_A PH0851 protein, 450AA l 99.4 5E-13 1.7E-17 117.6 9.1 118 37-181 257-391 (450)
78 3e05_A Precorrin-6Y C5,15-meth 99.4 1E-12 3.6E-17 102.7 10.0 102 36-181 37-144 (204)
79 1kpg_A CFA synthase;, cyclopro 99.4 1.1E-12 3.7E-17 107.5 10.4 105 36-183 61-172 (287)
80 2pxx_A Uncharacterized protein 99.4 2.2E-13 7.5E-18 106.2 5.9 115 37-183 40-163 (215)
81 3g2m_A PCZA361.24; SAM-depende 99.4 4.8E-14 1.6E-18 116.7 2.0 104 39-183 82-194 (299)
82 3sm3_A SAM-dependent methyltra 99.4 1.8E-13 6.3E-18 108.0 5.0 106 37-182 28-144 (235)
83 3bkw_A MLL3908 protein, S-aden 99.4 6E-13 2.1E-17 105.9 7.9 103 37-181 41-146 (243)
84 2kw5_A SLR1183 protein; struct 99.4 1.3E-13 4.6E-18 107.2 4.0 104 37-184 28-136 (202)
85 3jwh_A HEN1; methyltransferase 99.4 2.5E-13 8.7E-18 107.0 5.6 104 38-180 28-142 (217)
86 2ozv_A Hypothetical protein AT 99.4 9E-13 3.1E-17 107.8 9.0 124 33-179 30-170 (260)
87 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.1E-12 3.8E-17 105.1 9.3 104 37-180 91-198 (254)
88 3r3h_A O-methyltransferase, SA 99.4 3.7E-13 1.3E-17 109.2 6.6 104 38-178 59-169 (242)
89 3p9n_A Possible methyltransfer 99.4 8.9E-13 3E-17 102.0 8.3 107 38-183 43-157 (189)
90 1y8c_A S-adenosylmethionine-de 99.4 5.1E-13 1.7E-17 106.2 6.9 103 38-181 36-144 (246)
91 2p8j_A S-adenosylmethionine-de 99.4 2.1E-13 7E-18 106.4 4.5 108 37-184 21-133 (209)
92 1g8a_A Fibrillarin-like PRE-rR 99.4 6.3E-13 2.2E-17 105.6 7.3 104 37-179 71-178 (227)
93 3tma_A Methyltransferase; thum 99.4 1.6E-12 5.5E-17 110.5 10.2 122 27-181 191-319 (354)
94 3u81_A Catechol O-methyltransf 99.4 3.9E-13 1.3E-17 106.7 6.0 107 38-181 57-172 (221)
95 3ccf_A Cyclopropane-fatty-acyl 99.4 3.5E-13 1.2E-17 110.3 5.9 102 37-182 55-157 (279)
96 2fk8_A Methoxy mycolic acid sy 99.4 2.3E-12 8E-17 107.3 10.8 105 36-183 87-198 (318)
97 2fhp_A Methylase, putative; al 99.4 6.3E-13 2.2E-17 101.7 6.7 117 30-185 35-160 (187)
98 2bm8_A Cephalosporin hydroxyla 99.4 3.5E-12 1.2E-16 103.0 11.3 102 39-179 81-187 (236)
99 3cgg_A SAM-dependent methyltra 99.4 6.8E-13 2.3E-17 101.5 6.7 107 37-183 44-151 (195)
100 3dr5_A Putative O-methyltransf 99.4 4.5E-13 1.5E-17 107.4 5.7 111 27-178 44-162 (221)
101 2b9e_A NOL1/NOP2/SUN domain fa 99.4 3E-12 1E-16 107.9 11.0 116 37-179 100-234 (309)
102 3sso_A Methyltransferase; macr 99.4 4.9E-12 1.7E-16 110.1 12.6 106 38-181 215-326 (419)
103 3hm2_A Precorrin-6Y C5,15-meth 99.4 9.1E-13 3.1E-17 100.1 7.0 100 37-181 23-129 (178)
104 3jwg_A HEN1, methyltransferase 99.4 4E-13 1.4E-17 105.9 5.2 103 38-179 28-141 (219)
105 3ntv_A MW1564 protein; rossman 99.4 5.9E-13 2E-17 106.8 6.3 98 38-177 70-174 (232)
106 3njr_A Precorrin-6Y methylase; 99.4 1.6E-12 5.6E-17 102.5 8.7 99 36-182 52-157 (204)
107 3lbf_A Protein-L-isoaspartate 99.4 1.7E-12 6E-17 101.6 8.5 97 36-181 74-176 (210)
108 1ve3_A Hypothetical protein PH 99.4 6.7E-13 2.3E-17 104.6 6.0 104 37-181 36-144 (227)
109 3ggd_A SAM-dependent methyltra 99.4 9.4E-13 3.2E-17 105.4 7.0 114 34-183 51-167 (245)
110 1yzh_A TRNA (guanine-N(7)-)-me 99.4 6.2E-13 2.1E-17 105.0 5.7 111 38-179 40-156 (214)
111 1dus_A MJ0882; hypothetical pr 99.4 1.9E-12 6.5E-17 99.0 8.3 103 37-182 50-160 (194)
112 1zx0_A Guanidinoacetate N-meth 99.4 2.3E-13 7.8E-18 109.0 3.0 109 37-180 58-171 (236)
113 3dxy_A TRNA (guanine-N(7)-)-me 99.3 4.5E-13 1.5E-17 107.2 4.6 112 38-180 33-151 (218)
114 2fca_A TRNA (guanine-N(7)-)-me 99.3 5.6E-13 1.9E-17 105.8 4.8 110 38-179 37-153 (213)
115 2frn_A Hypothetical protein PH 99.3 4.5E-13 1.5E-17 110.7 4.4 98 37-181 123-227 (278)
116 2gs9_A Hypothetical protein TT 99.3 5.7E-13 1.9E-17 104.3 4.5 101 38-183 35-136 (211)
117 3mq2_A 16S rRNA methyltransfer 99.3 9.7E-13 3.3E-17 103.7 5.9 106 37-179 25-140 (218)
118 3dmg_A Probable ribosomal RNA 99.3 1E-12 3.5E-17 113.6 6.5 105 38-180 232-341 (381)
119 3lcc_A Putative methyl chlorid 99.3 5E-13 1.7E-17 106.6 4.2 102 40-183 67-175 (235)
120 3tfw_A Putative O-methyltransf 99.3 5.9E-13 2E-17 108.0 4.6 103 37-179 61-170 (248)
121 3uwp_A Histone-lysine N-methyl 99.3 1.6E-12 5.6E-17 113.5 7.5 110 28-178 163-287 (438)
122 3ocj_A Putative exported prote 99.3 4.3E-13 1.5E-17 111.5 3.6 108 37-182 116-230 (305)
123 2xvm_A Tellurite resistance pr 99.3 3.4E-12 1.1E-16 98.4 8.4 101 38-180 31-137 (199)
124 3thr_A Glycine N-methyltransfe 99.3 1.7E-13 6E-18 112.5 1.1 112 38-181 56-177 (293)
125 3bkx_A SAM-dependent methyltra 99.3 1.1E-11 3.7E-16 100.7 11.7 116 29-183 34-163 (275)
126 1fbn_A MJ fibrillarin homologu 99.3 3E-12 1E-16 102.3 8.1 102 37-178 72-177 (230)
127 3grz_A L11 mtase, ribosomal pr 99.3 1.4E-12 4.9E-17 101.8 6.1 99 37-182 58-162 (205)
128 2ih2_A Modification methylase 99.3 3E-11 1E-15 104.1 14.8 111 38-181 38-166 (421)
129 2avn_A Ubiquinone/menaquinone 99.3 1.1E-12 3.8E-17 106.4 5.5 102 38-181 53-154 (260)
130 3m70_A Tellurite resistance pr 99.3 1.6E-12 5.6E-17 106.5 6.5 101 39-181 120-225 (286)
131 3r0q_C Probable protein argini 99.3 9.2E-12 3.1E-16 107.1 11.3 103 35-178 59-168 (376)
132 2ift_A Putative methylase HI07 99.3 6.2E-13 2.1E-17 104.6 3.7 103 39-182 53-166 (201)
133 3d2l_A SAM-dependent methyltra 99.3 2.1E-12 7.2E-17 102.7 6.8 103 37-180 31-138 (243)
134 2vdw_A Vaccinia virus capping 99.3 7.1E-13 2.4E-17 111.1 4.1 112 38-182 47-172 (302)
135 2b3t_A Protein methyltransfera 99.3 6.2E-12 2.1E-16 103.2 9.5 111 38-179 108-238 (276)
136 4dcm_A Ribosomal RNA large sub 99.3 4E-12 1.4E-16 109.6 8.4 107 37-180 220-335 (375)
137 3m33_A Uncharacterized protein 99.3 2.7E-13 9.1E-18 108.1 0.7 91 37-176 46-139 (226)
138 3duw_A OMT, O-methyltransferas 99.3 1.4E-12 4.9E-17 103.1 5.0 102 38-178 57-166 (223)
139 3adn_A Spermidine synthase; am 99.3 1.3E-12 4.4E-17 109.3 4.7 106 38-179 82-198 (294)
140 3bgv_A MRNA CAP guanine-N7 met 99.3 2.4E-12 8.4E-17 107.2 6.4 113 38-182 33-158 (313)
141 3i9f_A Putative type 11 methyl 99.3 7.1E-13 2.4E-17 100.4 2.8 101 37-183 15-116 (170)
142 3mb5_A SAM-dependent methyltra 99.3 4.1E-12 1.4E-16 102.4 7.4 102 34-181 88-196 (255)
143 2ex4_A Adrenal gland protein A 99.3 1.1E-12 3.6E-17 105.2 3.9 104 38-181 78-187 (241)
144 3q87_B N6 adenine specific DNA 99.3 3.5E-12 1.2E-16 97.7 6.6 66 38-122 22-87 (170)
145 1i1n_A Protein-L-isoaspartate 99.3 8.7E-13 3E-17 104.6 3.1 100 37-182 75-185 (226)
146 1jsx_A Glucose-inhibited divis 99.3 6.6E-12 2.3E-16 97.9 7.9 95 39-179 65-165 (207)
147 3p2e_A 16S rRNA methylase; met 99.3 4.3E-12 1.5E-16 101.9 6.8 107 38-179 23-139 (225)
148 1xdz_A Methyltransferase GIDB; 99.3 2E-12 6.7E-17 104.0 4.6 99 38-178 69-173 (240)
149 2yxe_A Protein-L-isoaspartate 99.3 5.9E-12 2E-16 98.9 7.2 101 36-182 74-180 (215)
150 1ws6_A Methyltransferase; stru 99.3 1.5E-12 5E-17 98.1 3.6 107 38-185 40-153 (171)
151 3g89_A Ribosomal RNA small sub 99.3 2.7E-12 9.3E-17 104.6 5.4 99 38-178 79-183 (249)
152 3ckk_A TRNA (guanine-N(7)-)-me 99.3 1.2E-12 3.9E-17 106.0 3.1 112 38-180 45-169 (235)
153 3tr6_A O-methyltransferase; ce 99.3 1.1E-12 3.7E-17 103.8 2.7 103 38-179 63-174 (225)
154 2fpo_A Methylase YHHF; structu 99.3 2.9E-12 1E-16 100.7 5.2 103 39-183 54-164 (202)
155 2aot_A HMT, histamine N-methyl 99.3 3.9E-12 1.3E-16 105.0 6.0 113 38-182 51-175 (292)
156 1sui_A Caffeoyl-COA O-methyltr 99.3 2.9E-12 9.8E-17 104.2 5.0 105 38-178 78-189 (247)
157 3a27_A TYW2, uncharacterized p 99.3 3E-12 1E-16 105.5 5.1 103 34-182 114-222 (272)
158 1vbf_A 231AA long hypothetical 99.3 1.5E-11 5.2E-16 97.5 8.8 98 36-182 67-168 (231)
159 2b25_A Hypothetical protein; s 99.3 6.2E-12 2.1E-16 106.0 6.9 103 36-181 102-221 (336)
160 1dl5_A Protein-L-isoaspartate 99.3 1E-11 3.4E-16 104.2 8.1 101 36-182 72-178 (317)
161 3q7e_A Protein arginine N-meth 99.3 7.2E-12 2.5E-16 106.7 7.0 101 37-177 64-171 (349)
162 2fyt_A Protein arginine N-meth 99.3 1.7E-11 5.9E-16 104.1 9.3 100 37-176 62-168 (340)
163 1p91_A Ribosomal RNA large sub 99.3 3.9E-12 1.3E-16 103.3 5.1 98 38-183 84-182 (269)
164 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.1E-12 1.7E-16 101.6 5.6 101 36-181 93-200 (258)
165 3gdh_A Trimethylguanosine synt 99.3 2.7E-13 9.2E-18 108.5 -1.9 72 38-124 77-155 (241)
166 2i62_A Nicotinamide N-methyltr 99.2 2.6E-12 8.9E-17 103.4 3.8 112 38-183 55-202 (265)
167 3cc8_A Putative methyltransfer 99.2 7.5E-12 2.6E-16 98.2 6.3 102 38-181 31-132 (230)
168 2gpy_A O-methyltransferase; st 99.2 4.5E-12 1.5E-16 101.1 4.8 101 37-178 52-159 (233)
169 2a14_A Indolethylamine N-methy 99.2 6.8E-13 2.3E-17 108.3 -0.0 113 37-183 53-201 (263)
170 1o9g_A RRNA methyltransferase; 99.2 4E-12 1.4E-16 102.7 4.4 113 38-177 50-212 (250)
171 3c3p_A Methyltransferase; NP_9 99.2 2.4E-12 8.4E-17 101.1 3.0 98 38-178 55-159 (210)
172 1l3i_A Precorrin-6Y methyltran 99.2 1.6E-11 5.5E-16 93.6 7.4 100 36-181 30-136 (192)
173 2zfu_A Nucleomethylin, cerebra 99.2 2.6E-11 8.9E-16 95.2 8.3 90 37-182 65-154 (215)
174 4auk_A Ribosomal RNA large sub 99.2 1.6E-11 5.3E-16 105.8 7.4 92 18-124 183-281 (375)
175 2pbf_A Protein-L-isoaspartate 99.2 4.6E-12 1.6E-16 100.4 3.9 108 36-182 77-196 (227)
176 1yb2_A Hypothetical protein TA 99.2 1.1E-11 3.9E-16 101.6 6.3 100 36-181 107-213 (275)
177 2pjd_A Ribosomal RNA small sub 99.2 8.1E-12 2.8E-16 105.9 5.4 105 38-180 195-304 (343)
178 4dmg_A Putative uncharacterize 99.2 1.3E-11 4.5E-16 107.1 6.7 112 37-181 212-328 (393)
179 2b78_A Hypothetical protein SM 99.2 2.5E-11 8.7E-16 104.8 8.4 116 38-182 211-334 (385)
180 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.1E-11 3.7E-16 100.1 5.6 111 38-179 48-173 (246)
181 1r18_A Protein-L-isoaspartate( 99.2 1.4E-11 4.8E-16 98.0 6.2 104 36-182 81-197 (227)
182 2y1w_A Histone-arginine methyl 99.2 6.5E-11 2.2E-15 100.7 10.7 100 37-178 48-154 (348)
183 3v97_A Ribosomal RNA large sub 99.2 8.6E-12 3E-16 115.4 5.5 113 38-180 538-658 (703)
184 1fp1_D Isoliquiritigenin 2'-O- 99.2 1.1E-10 3.7E-15 99.8 11.9 111 28-181 198-308 (372)
185 2nxc_A L11 mtase, ribosomal pr 99.2 1.9E-11 6.4E-16 99.6 6.8 98 37-181 118-220 (254)
186 1af7_A Chemotaxis receptor met 99.2 2.1E-11 7.1E-16 101.2 7.0 107 39-179 105-252 (274)
187 1i9g_A Hypothetical protein RV 99.2 1.6E-11 5.5E-16 100.2 6.2 101 36-181 96-205 (280)
188 3c3y_A Pfomt, O-methyltransfer 99.2 5.3E-12 1.8E-16 101.8 3.3 106 38-179 69-181 (237)
189 2igt_A SAM dependent methyltra 99.2 8.9E-12 3E-16 105.8 4.7 117 38-183 152-276 (332)
190 1vlm_A SAM-dependent methyltra 99.2 7.8E-12 2.7E-16 98.8 4.1 96 39-182 47-142 (219)
191 1nv8_A HEMK protein; class I a 99.2 8.8E-12 3E-16 103.5 4.4 70 39-123 123-202 (284)
192 2as0_A Hypothetical protein PH 99.2 3.2E-11 1.1E-15 104.1 8.0 116 38-182 216-338 (396)
193 2yxd_A Probable cobalt-precorr 99.2 1.7E-11 5.7E-16 93.0 5.5 95 37-181 33-133 (183)
194 3k6r_A Putative transferase PH 99.2 7.3E-12 2.5E-16 104.2 3.8 99 36-181 122-227 (278)
195 2avd_A Catechol-O-methyltransf 99.2 1.4E-11 4.8E-16 97.6 5.3 103 37-178 67-178 (229)
196 3gjy_A Spermidine synthase; AP 99.2 1.2E-11 3.9E-16 104.7 5.0 108 41-183 91-204 (317)
197 1g6q_1 HnRNP arginine N-methyl 99.2 7.4E-11 2.5E-15 99.6 9.9 99 38-176 37-142 (328)
198 1o54_A SAM-dependent O-methylt 99.2 1.3E-11 4.4E-16 101.2 4.9 100 36-181 109-215 (277)
199 4hc4_A Protein arginine N-meth 99.2 5.3E-11 1.8E-15 102.8 8.9 97 39-176 83-186 (376)
200 3reo_A (ISO)eugenol O-methyltr 99.2 2.3E-10 7.8E-15 97.9 12.1 110 30-182 194-303 (368)
201 1inl_A Spermidine synthase; be 99.2 8.8E-12 3E-16 104.1 2.7 107 38-179 89-205 (296)
202 2g72_A Phenylethanolamine N-me 99.2 6.8E-12 2.3E-16 103.3 1.9 110 38-180 70-216 (289)
203 2h00_A Methyltransferase 10 do 99.2 7E-12 2.4E-16 101.2 1.9 79 39-124 65-151 (254)
204 4fzv_A Putative methyltransfer 99.2 2.9E-11 1E-15 103.9 5.8 114 37-179 146-284 (359)
205 1wxx_A TT1595, hypothetical pr 99.2 2.4E-11 8.3E-16 104.5 5.3 114 39-182 209-328 (382)
206 3p9c_A Caffeic acid O-methyltr 99.1 7.3E-10 2.5E-14 94.7 14.4 111 29-182 191-301 (364)
207 4e2x_A TCAB9; kijanose, tetron 99.1 7.7E-12 2.6E-16 108.1 2.0 106 37-181 105-210 (416)
208 2hnk_A SAM-dependent O-methylt 99.1 1.7E-11 5.9E-16 98.3 3.9 108 37-179 58-181 (239)
209 1iy9_A Spermidine synthase; ro 99.1 1.1E-11 3.9E-16 102.4 2.9 107 38-180 74-190 (275)
210 3lec_A NADB-rossmann superfami 99.1 5.8E-11 2E-15 96.3 6.9 104 35-182 17-128 (230)
211 3mcz_A O-methyltransferase; ad 99.1 1.3E-10 4.5E-15 98.0 8.8 113 29-180 169-288 (352)
212 1uir_A Polyamine aminopropyltr 99.1 1.5E-11 5.3E-16 103.4 3.0 109 38-180 76-196 (314)
213 3kr9_A SAM-dependent methyltra 99.1 5.9E-11 2E-15 95.9 6.3 104 35-181 11-121 (225)
214 1jg1_A PIMT;, protein-L-isoasp 99.1 3E-11 1E-15 96.6 4.4 100 36-183 88-193 (235)
215 3gnl_A Uncharacterized protein 99.1 1.1E-10 3.9E-15 95.3 7.9 104 35-182 17-128 (244)
216 2r3s_A Uncharacterized protein 99.1 3.1E-10 1.1E-14 94.8 10.7 113 29-182 154-274 (335)
217 3cbg_A O-methyltransferase; cy 99.1 3.5E-11 1.2E-15 96.5 4.7 102 38-178 71-181 (232)
218 2pt6_A Spermidine synthase; tr 99.1 2.9E-11 9.8E-16 102.2 4.1 107 38-180 115-231 (321)
219 3bwc_A Spermidine synthase; SA 99.1 1E-11 3.5E-16 104.0 1.3 106 38-179 94-210 (304)
220 1mjf_A Spermidine synthase; sp 99.1 2E-11 6.9E-16 101.0 3.1 103 38-179 74-193 (281)
221 2qe6_A Uncharacterized protein 99.1 8.1E-11 2.8E-15 97.1 6.6 113 39-183 77-200 (274)
222 1u2z_A Histone-lysine N-methyl 99.1 1.9E-10 6.6E-15 101.0 9.3 105 36-178 239-358 (433)
223 2i7c_A Spermidine synthase; tr 99.1 3E-11 1E-15 100.2 3.9 106 38-179 77-192 (283)
224 2yvl_A TRMI protein, hypotheti 99.1 1.3E-10 4.5E-15 92.7 7.5 98 36-181 88-192 (248)
225 2o07_A Spermidine synthase; st 99.1 1.3E-11 4.3E-16 103.6 1.6 106 38-179 94-209 (304)
226 3lst_A CALO1 methyltransferase 99.1 1.4E-09 4.9E-14 92.0 14.3 110 29-181 175-288 (348)
227 1xj5_A Spermidine synthase 1; 99.1 2E-11 6.9E-16 103.8 2.6 107 37-178 118-234 (334)
228 1x19_A CRTF-related protein; m 99.1 5.6E-10 1.9E-14 94.7 11.4 110 29-181 181-297 (359)
229 3bzb_A Uncharacterized protein 99.1 1.4E-10 4.7E-15 95.8 7.4 119 24-179 64-205 (281)
230 1yub_A Ermam, rRNA methyltrans 99.1 1.6E-12 5.5E-17 105.3 -4.2 73 37-123 27-103 (245)
231 3htx_A HEN1; HEN1, small RNA m 99.1 7.7E-11 2.6E-15 110.2 5.6 106 38-182 720-837 (950)
232 2ip2_A Probable phenazine-spec 99.1 9.7E-10 3.3E-14 92.0 11.9 108 30-181 160-274 (334)
233 3b3j_A Histone-arginine methyl 99.1 1.7E-10 5.7E-15 102.6 7.4 100 37-178 156-262 (480)
234 1fp2_A Isoflavone O-methyltran 99.1 2.9E-10 1E-14 96.3 8.7 103 37-182 186-291 (352)
235 3c0k_A UPF0064 protein YCCW; P 99.1 4.1E-11 1.4E-15 103.5 3.2 116 38-182 219-342 (396)
236 3tm4_A TRNA (guanine N2-)-meth 99.1 1.3E-10 4.4E-15 99.8 6.3 98 37-149 215-319 (373)
237 3i53_A O-methyltransferase; CO 99.1 3E-10 1E-14 95.3 8.3 102 38-181 168-276 (332)
238 3gwz_A MMCR; methyltransferase 99.1 1E-09 3.4E-14 93.8 11.6 110 30-182 194-310 (369)
239 3dp7_A SAM-dependent methyltra 99.1 4.3E-10 1.5E-14 95.9 8.9 104 38-180 178-288 (363)
240 2b2c_A Spermidine synthase; be 99.1 4.9E-11 1.7E-15 100.6 3.0 105 38-179 107-222 (314)
241 2yx1_A Hypothetical protein MJ 99.0 1.2E-10 4.2E-15 98.7 4.4 95 37-182 193-294 (336)
242 1qzz_A RDMB, aclacinomycin-10- 99.0 6.9E-10 2.3E-14 94.2 8.4 102 37-180 180-288 (374)
243 1wy7_A Hypothetical protein PH 99.0 7E-10 2.4E-14 86.4 7.7 72 37-124 47-123 (207)
244 1tw3_A COMT, carminomycin 4-O- 99.0 1.5E-09 5E-14 91.8 9.9 103 37-181 181-290 (360)
245 2qm3_A Predicted methyltransfe 99.0 7E-10 2.4E-14 95.1 7.4 102 38-181 171-280 (373)
246 2f8l_A Hypothetical protein LM 99.0 2.6E-10 9E-15 96.5 4.6 113 37-179 128-256 (344)
247 1ne2_A Hypothetical protein TA 99.0 5.9E-10 2E-14 86.6 5.9 70 37-122 49-119 (200)
248 4azs_A Methyltransferase WBDD; 99.0 3.7E-10 1.3E-14 101.9 5.2 70 38-119 65-140 (569)
249 3giw_A Protein of unknown func 99.0 1.9E-09 6.4E-14 89.5 8.8 113 41-183 80-204 (277)
250 1zg3_A Isoflavanone 4'-O-methy 99.0 1.9E-09 6.3E-14 91.5 8.9 102 37-181 191-295 (358)
251 2h1r_A Dimethyladenosine trans 99.0 3.2E-10 1.1E-14 94.7 3.9 70 37-122 40-115 (299)
252 2cmg_A Spermidine synthase; tr 98.9 5.9E-10 2E-14 91.6 5.0 91 38-179 71-171 (262)
253 3gru_A Dimethyladenosine trans 98.9 1.1E-09 3.7E-14 91.7 6.2 74 35-122 46-123 (295)
254 3fut_A Dimethyladenosine trans 98.9 1.8E-09 6.1E-14 89.4 6.7 73 37-123 45-120 (271)
255 2jjq_A Uncharacterized RNA met 98.9 3.2E-09 1.1E-13 93.0 7.9 69 37-122 288-362 (425)
256 1uwv_A 23S rRNA (uracil-5-)-me 98.9 3.5E-09 1.2E-13 92.6 7.8 76 37-122 284-365 (433)
257 2okc_A Type I restriction enzy 98.9 2E-09 6.7E-14 94.4 5.5 117 37-180 169-308 (445)
258 3fzg_A 16S rRNA methylase; met 98.8 1.9E-10 6.5E-15 90.9 -1.3 68 37-119 47-121 (200)
259 2dul_A N(2),N(2)-dimethylguano 98.8 2.2E-09 7.6E-14 92.6 4.3 97 39-179 47-164 (378)
260 1zq9_A Probable dimethyladenos 98.8 4E-09 1.4E-13 87.4 5.6 70 37-122 26-102 (285)
261 3ldu_A Putative methylase; str 98.8 1.8E-08 6.1E-13 87.0 9.7 87 27-122 183-310 (385)
262 3k0b_A Predicted N6-adenine-sp 98.8 6.9E-08 2.4E-12 83.6 11.8 87 27-122 189-316 (393)
263 3ldg_A Putative uncharacterize 98.7 1.1E-07 3.6E-12 82.3 12.8 88 27-123 182-310 (384)
264 2ar0_A M.ecoki, type I restric 98.7 8.2E-09 2.8E-13 92.9 5.9 121 37-182 167-315 (541)
265 3tqs_A Ribosomal RNA small sub 98.7 7.6E-09 2.6E-13 84.8 4.9 75 37-122 27-105 (255)
266 3axs_A Probable N(2),N(2)-dime 98.7 3.6E-09 1.2E-13 91.9 3.0 100 38-179 51-158 (392)
267 4a6d_A Hydroxyindole O-methylt 98.7 3.7E-08 1.3E-12 83.7 9.2 102 37-180 177-284 (353)
268 1qam_A ERMC' methyltransferase 98.7 1.8E-08 6E-13 81.6 6.6 73 36-122 27-103 (244)
269 3bt7_A TRNA (uracil-5-)-methyl 98.7 3.5E-09 1.2E-13 90.6 2.3 73 40-122 214-304 (369)
270 1m6y_A S-adenosyl-methyltransf 98.7 6.4E-09 2.2E-13 87.2 3.5 79 37-122 24-107 (301)
271 2qfm_A Spermine synthase; sper 98.7 7.3E-09 2.5E-13 89.0 3.8 113 38-179 187-314 (364)
272 3s1s_A Restriction endonucleas 98.6 5.6E-08 1.9E-12 90.8 7.5 79 37-123 319-409 (878)
273 3uzu_A Ribosomal RNA small sub 98.6 3.1E-08 1.1E-12 82.1 3.8 81 37-122 40-123 (279)
274 3ftd_A Dimethyladenosine trans 98.6 4E-08 1.4E-12 80.0 4.4 75 37-123 29-105 (249)
275 3v97_A Ribosomal RNA large sub 98.5 1.9E-07 6.5E-12 86.4 9.1 91 27-123 178-313 (703)
276 2ld4_A Anamorsin; methyltransf 98.5 6.5E-09 2.2E-13 79.1 -0.8 90 37-180 10-102 (176)
277 3khk_A Type I restriction-modi 98.5 2.9E-08 1E-12 89.4 3.2 80 37-124 243-340 (544)
278 2r6z_A UPF0341 protein in RSP 98.5 7.8E-09 2.7E-13 84.7 -0.6 75 37-123 81-171 (258)
279 2k4m_A TR8_protein, UPF0146 pr 98.5 3.6E-07 1.2E-11 69.0 7.7 92 38-185 34-127 (153)
280 3lkd_A Type I restriction-modi 98.5 1.9E-07 6.6E-12 84.0 7.2 81 38-124 220-308 (542)
281 3ll7_A Putative methyltransfer 98.5 2.6E-08 8.9E-13 86.9 1.3 75 37-123 91-173 (410)
282 3lcv_B Sisomicin-gentamicin re 98.5 3.3E-08 1.1E-12 81.6 1.2 72 36-120 129-205 (281)
283 1qyr_A KSGA, high level kasuga 98.4 8.9E-08 3E-12 78.2 3.6 78 37-123 19-100 (252)
284 3frh_A 16S rRNA methylase; met 98.4 2.2E-07 7.5E-12 75.9 5.2 67 38-120 104-175 (253)
285 4gqb_A Protein arginine N-meth 98.4 1.6E-07 5.5E-12 85.9 4.4 98 40-176 358-464 (637)
286 2oyr_A UPF0341 protein YHIQ; a 98.4 5.8E-08 2E-12 79.7 1.2 74 37-123 84-174 (258)
287 3o4f_A Spermidine synthase; am 98.4 4.2E-07 1.4E-11 76.0 6.0 106 38-179 82-198 (294)
288 2hwk_A Helicase NSP2; rossman 98.2 3.8E-06 1.3E-10 69.5 7.6 103 47-184 149-259 (320)
289 3b5i_A S-adenosyl-L-methionine 98.2 4.4E-05 1.5E-09 65.7 14.0 80 40-124 53-161 (374)
290 1wg8_A Predicted S-adenosylmet 98.1 1.9E-06 6.6E-11 71.5 5.1 84 28-121 12-97 (285)
291 3ua3_A Protein arginine N-meth 98.1 8.2E-07 2.8E-11 81.9 3.0 107 40-176 410-531 (745)
292 3tka_A Ribosomal RNA small sub 98.1 4.4E-06 1.5E-10 71.0 5.7 89 27-121 46-136 (347)
293 2qy6_A UPF0209 protein YFCK; s 98.1 2.7E-06 9.4E-11 69.6 4.2 108 38-177 59-211 (257)
294 3cvo_A Methyltransferase-like 98.0 9.1E-06 3.1E-10 64.4 6.9 77 38-121 29-130 (202)
295 2wk1_A NOVP; transferase, O-me 98.0 4.1E-05 1.4E-09 63.5 9.6 104 38-178 105-243 (282)
296 3ufb_A Type I restriction-modi 97.9 6.9E-06 2.3E-10 73.7 4.8 93 27-123 205-312 (530)
297 2efj_A 3,7-dimethylxanthine me 97.9 7E-05 2.4E-09 64.7 9.8 80 40-124 53-160 (384)
298 3c6k_A Spermine synthase; sper 97.8 2.5E-05 8.6E-10 67.3 5.4 113 38-178 204-330 (381)
299 1m6e_X S-adenosyl-L-methionnin 97.7 8.2E-05 2.8E-09 63.7 8.2 78 40-122 52-148 (359)
300 3g7u_A Cytosine-specific methy 97.4 0.00028 9.6E-09 60.6 6.7 102 41-148 3-108 (376)
301 2zig_A TTHA0409, putative modi 97.1 0.00023 7.9E-09 58.8 3.4 39 38-82 234-272 (297)
302 1g55_A DNA cytosine methyltran 97.0 0.00041 1.4E-08 58.7 3.4 77 41-125 3-80 (343)
303 2oo3_A Protein involved in cat 97.0 0.00028 9.4E-09 58.5 2.1 74 40-123 92-169 (283)
304 3ubt_Y Modification methylase 96.7 0.0019 6.6E-08 53.5 5.3 70 42-124 2-72 (331)
305 3tos_A CALS11; methyltransfera 96.5 0.032 1.1E-06 45.5 11.4 108 40-180 70-218 (257)
306 1i4w_A Mitochondrial replicati 96.4 0.0018 6.3E-08 55.2 3.4 57 39-99 58-117 (353)
307 2qrv_A DNA (cytosine-5)-methyl 96.3 0.0035 1.2E-07 52.1 4.4 76 39-124 15-94 (295)
308 3vyw_A MNMC2; tRNA wobble urid 96.2 0.0073 2.5E-07 50.5 6.0 103 40-176 97-223 (308)
309 1g60_A Adenine-specific methyl 96.1 0.0059 2E-07 49.3 5.0 37 38-80 211-247 (260)
310 4h0n_A DNMT2; SAH binding, tra 96.0 0.0026 8.7E-08 53.7 2.1 75 42-124 5-80 (333)
311 2c7p_A Modification methylase 95.7 0.0053 1.8E-07 51.6 3.0 72 40-125 11-83 (327)
312 3qv2_A 5-cytosine DNA methyltr 95.7 0.0037 1.3E-07 52.6 1.8 78 40-126 10-89 (327)
313 2dph_A Formaldehyde dismutase; 95.6 0.0083 2.8E-07 51.1 3.9 76 36-119 182-260 (398)
314 1f8f_A Benzyl alcohol dehydrog 95.4 0.0087 3E-07 50.4 3.3 104 35-181 186-291 (371)
315 3two_A Mannitol dehydrogenase; 95.4 0.011 3.6E-07 49.4 3.7 42 36-82 173-215 (348)
316 1pl8_A Human sorbitol dehydrog 95.3 0.01 3.4E-07 49.8 3.2 42 36-82 168-211 (356)
317 3uko_A Alcohol dehydrogenase c 95.3 0.04 1.4E-06 46.4 6.9 104 35-181 189-297 (378)
318 1e3j_A NADP(H)-dependent ketos 95.2 0.016 5.4E-07 48.4 4.3 42 36-82 165-207 (352)
319 2zig_A TTHA0409, putative modi 95.2 0.016 5.4E-07 47.6 4.0 68 88-179 21-97 (297)
320 1pqw_A Polyketide synthase; ro 95.1 0.018 6.2E-07 43.8 4.0 78 35-120 34-114 (198)
321 3jv7_A ADH-A; dehydrogenase, n 95.1 0.0098 3.4E-07 49.5 2.6 104 36-181 168-272 (345)
322 1boo_A Protein (N-4 cytosine-s 95.1 0.028 9.6E-07 46.8 5.3 70 87-180 13-85 (323)
323 4b7c_A Probable oxidoreductase 95.0 0.023 7.9E-07 46.9 4.6 103 33-180 143-249 (336)
324 3iht_A S-adenosyl-L-methionine 95.0 0.19 6.3E-06 38.2 9.0 75 40-122 41-115 (174)
325 3s2e_A Zinc-containing alcohol 94.9 0.012 3.9E-07 49.0 2.6 42 36-82 163-205 (340)
326 3gms_A Putative NADPH:quinone 94.9 0.031 1.1E-06 46.4 5.2 76 35-119 140-219 (340)
327 4eez_A Alcohol dehydrogenase 1 94.8 0.02 6.8E-07 47.5 3.6 104 36-181 160-265 (348)
328 1p0f_A NADP-dependent alcohol 94.7 0.061 2.1E-06 45.2 6.5 77 35-119 187-267 (373)
329 2hcy_A Alcohol dehydrogenase 1 94.6 0.039 1.3E-06 45.9 5.1 101 36-180 166-270 (347)
330 2jhf_A Alcohol dehydrogenase E 94.4 0.073 2.5E-06 44.7 6.3 76 35-119 187-267 (374)
331 1cdo_A Alcohol dehydrogenase; 94.4 0.066 2.3E-06 44.9 6.0 43 35-82 188-232 (374)
332 1e3i_A Alcohol dehydrogenase, 94.4 0.066 2.3E-06 45.0 6.0 43 35-82 191-235 (376)
333 4a2c_A Galactitol-1-phosphate 94.4 0.036 1.2E-06 45.8 4.2 106 35-182 156-263 (346)
334 1kol_A Formaldehyde dehydrogen 94.3 0.024 8.2E-07 48.1 3.1 77 36-120 182-261 (398)
335 2j3h_A NADP-dependent oxidored 94.3 0.084 2.9E-06 43.6 6.3 100 35-180 151-256 (345)
336 3fpc_A NADP-dependent alcohol 94.3 0.0072 2.5E-07 50.5 -0.3 77 35-119 162-241 (352)
337 1v3u_A Leukotriene B4 12- hydr 94.3 0.051 1.7E-06 44.8 5.0 100 35-179 141-244 (333)
338 3uog_A Alcohol dehydrogenase; 94.2 0.01 3.5E-07 49.9 0.6 77 35-119 185-263 (363)
339 3m6i_A L-arabinitol 4-dehydrog 94.2 0.044 1.5E-06 45.8 4.5 106 36-182 176-286 (363)
340 2fzw_A Alcohol dehydrogenase c 94.1 0.073 2.5E-06 44.6 5.8 43 35-82 186-230 (373)
341 4dvj_A Putative zinc-dependent 94.1 0.077 2.6E-06 44.5 5.9 97 39-178 171-269 (363)
342 2dq4_A L-threonine 3-dehydroge 94.1 0.035 1.2E-06 46.1 3.6 73 36-119 162-237 (343)
343 4eye_A Probable oxidoreductase 94.1 0.033 1.1E-06 46.3 3.5 80 33-120 153-234 (342)
344 3jyn_A Quinone oxidoreductase; 94.0 0.026 8.8E-07 46.6 2.7 103 35-181 136-241 (325)
345 3trk_A Nonstructural polyprote 93.9 0.068 2.3E-06 43.9 4.7 51 112-180 210-260 (324)
346 4ej6_A Putative zinc-binding d 93.8 0.018 6E-07 48.7 1.2 43 36-82 179-222 (370)
347 1uuf_A YAHK, zinc-type alcohol 93.7 0.015 5.1E-07 49.2 0.7 42 36-82 191-233 (369)
348 2py6_A Methyltransferase FKBM; 93.7 0.075 2.6E-06 45.7 5.1 41 37-80 224-265 (409)
349 3goh_A Alcohol dehydrogenase, 93.7 0.061 2.1E-06 44.0 4.3 43 34-82 137-180 (315)
350 3qwb_A Probable quinone oxidor 93.6 0.037 1.3E-06 45.7 2.9 78 35-120 144-224 (334)
351 1vj0_A Alcohol dehydrogenase, 93.6 0.018 6.3E-07 48.7 1.0 41 37-82 193-235 (380)
352 3dqp_A Oxidoreductase YLBE; al 93.5 1.5 5.3E-05 33.1 11.9 73 42-124 2-74 (219)
353 1piw_A Hypothetical zinc-type 93.3 0.1 3.4E-06 43.6 5.2 42 36-82 176-218 (360)
354 1eg2_A Modification methylase 93.3 0.045 1.5E-06 45.7 2.8 68 88-179 38-106 (319)
355 1yb5_A Quinone oxidoreductase; 93.2 0.074 2.5E-06 44.4 4.2 79 34-120 165-246 (351)
356 1g60_A Adenine-specific methyl 93.2 0.081 2.8E-06 42.5 4.2 67 89-179 5-74 (260)
357 2b5w_A Glucose dehydrogenase; 92.8 0.21 7.1E-06 41.6 6.4 100 37-181 164-275 (357)
358 2vz8_A Fatty acid synthase; tr 92.8 0.12 4.2E-06 53.9 5.8 104 39-179 1240-1348(2512)
359 3fbg_A Putative arginate lyase 92.7 0.11 3.8E-06 43.1 4.5 72 39-119 150-223 (346)
360 3ip1_A Alcohol dehydrogenase, 92.6 0.06 2.1E-06 45.8 2.8 77 36-119 210-288 (404)
361 1rjw_A ADH-HT, alcohol dehydro 92.3 0.066 2.3E-06 44.4 2.6 42 36-82 161-203 (339)
362 1boo_A Protein (N-4 cytosine-s 92.0 0.17 5.8E-06 42.0 4.8 37 38-80 251-287 (323)
363 1eg2_A Modification methylase 92.0 0.25 8.6E-06 41.1 5.8 45 26-77 230-274 (319)
364 3pvc_A TRNA 5-methylaminomethy 91.2 0.22 7.5E-06 45.4 5.0 40 40-79 59-106 (689)
365 1jvb_A NAD(H)-dependent alcoho 91.1 0.13 4.3E-06 42.7 3.1 104 35-180 166-272 (347)
366 2eih_A Alcohol dehydrogenase; 91.1 0.078 2.7E-06 44.0 1.8 77 36-120 163-242 (343)
367 2h6e_A ADH-4, D-arabinose 1-de 91.1 0.044 1.5E-06 45.5 0.2 43 36-82 168-211 (344)
368 1iz0_A Quinone oxidoreductase; 91.0 0.14 4.8E-06 41.5 3.2 41 37-82 123-165 (302)
369 2d8a_A PH0655, probable L-thre 90.9 0.052 1.8E-06 45.1 0.5 75 36-119 165-242 (348)
370 2cf5_A Atccad5, CAD, cinnamyl 90.9 0.069 2.3E-06 44.6 1.3 40 37-81 177-218 (357)
371 3me5_A Cytosine-specific methy 90.8 0.075 2.6E-06 47.0 1.5 76 41-125 89-181 (482)
372 4fgs_A Probable dehydrogenase 90.7 0.078 2.7E-06 43.3 1.4 81 39-122 28-112 (273)
373 3oig_A Enoyl-[acyl-carrier-pro 90.6 0.37 1.3E-05 38.0 5.3 82 39-122 6-96 (266)
374 3krt_A Crotonyl COA reductase; 90.6 0.13 4.5E-06 44.4 2.8 41 36-81 225-267 (456)
375 4ft4_B DNA (cytosine-5)-methyl 90.5 0.2 7E-06 46.3 4.2 42 41-82 213-255 (784)
376 4gua_A Non-structural polyprot 90.3 0.29 9.9E-06 44.1 4.7 52 111-180 219-270 (670)
377 2h7i_A Enoyl-[acyl-carrier-pro 90.0 0.15 5.1E-06 40.6 2.4 82 39-122 6-96 (269)
378 4dup_A Quinone oxidoreductase; 89.9 0.074 2.5E-06 44.4 0.6 77 35-120 163-242 (353)
379 2zb4_A Prostaglandin reductase 89.8 0.27 9.1E-06 40.8 3.9 78 35-120 154-237 (357)
380 4a0s_A Octenoyl-COA reductase/ 89.6 0.18 6.1E-06 43.3 2.8 43 35-82 216-260 (447)
381 3swr_A DNA (cytosine-5)-methyl 89.5 0.23 7.8E-06 47.7 3.7 78 41-125 541-630 (1002)
382 2vn8_A Reticulon-4-interacting 89.5 0.35 1.2E-05 40.5 4.5 38 37-80 181-220 (375)
383 1qor_A Quinone oxidoreductase; 89.2 0.16 5.5E-06 41.6 2.1 79 34-120 135-216 (327)
384 3gaz_A Alcohol dehydrogenase s 88.7 0.15 5E-06 42.4 1.6 74 35-119 146-222 (343)
385 2g1u_A Hypothetical protein TM 88.6 3.4 0.00012 29.7 8.9 75 37-119 16-90 (155)
386 2cdc_A Glucose dehydrogenase g 88.6 0.19 6.4E-06 42.0 2.2 33 40-77 181-214 (366)
387 1wly_A CAAR, 2-haloacrylate re 88.6 0.19 6.7E-06 41.3 2.2 78 35-120 141-221 (333)
388 3ek2_A Enoyl-(acyl-carrier-pro 88.2 0.19 6.4E-06 39.6 1.9 83 38-122 12-101 (271)
389 2c0c_A Zinc binding alcohol de 88.0 0.38 1.3E-05 40.2 3.7 76 35-119 159-237 (362)
390 1xa0_A Putative NADPH dependen 88.0 0.18 6.1E-06 41.3 1.6 42 36-82 145-189 (328)
391 3nx4_A Putative oxidoreductase 87.9 0.16 5.4E-06 41.5 1.3 36 42-82 149-186 (324)
392 3k31_A Enoyl-(acyl-carrier-pro 87.4 0.26 9E-06 39.9 2.3 81 40-122 30-117 (296)
393 3ew7_A LMO0794 protein; Q8Y8U8 87.3 2 6.8E-05 32.1 7.2 69 42-122 2-70 (221)
394 4eso_A Putative oxidoreductase 86.7 0.54 1.9E-05 37.1 3.7 81 39-122 7-91 (255)
395 1h2b_A Alcohol dehydrogenase; 86.6 0.85 2.9E-05 37.9 5.1 78 35-119 182-260 (359)
396 3av4_A DNA (cytosine-5)-methyl 86.4 0.56 1.9E-05 46.3 4.3 78 41-125 852-941 (1330)
397 1tt7_A YHFP; alcohol dehydroge 86.4 0.26 9.1E-06 40.3 1.8 42 36-82 146-190 (330)
398 3ijr_A Oxidoreductase, short c 86.3 1.4 4.7E-05 35.5 6.0 81 39-122 46-134 (291)
399 1yqd_A Sinapyl alcohol dehydro 86.3 0.17 5.7E-06 42.4 0.5 40 37-81 184-225 (366)
400 3ps9_A TRNA 5-methylaminomethy 86.2 0.32 1.1E-05 44.1 2.4 39 40-78 67-113 (676)
401 3sxp_A ADP-L-glycero-D-mannohe 86.1 6.8 0.00023 31.9 10.4 79 39-122 9-99 (362)
402 2j8z_A Quinone oxidoreductase; 86.0 0.14 4.7E-06 42.7 -0.2 78 35-120 158-238 (354)
403 1wma_A Carbonyl reductase [NAD 85.5 0.98 3.4E-05 35.1 4.7 81 39-122 3-91 (276)
404 2pd4_A Enoyl-[acyl-carrier-pro 85.4 0.91 3.1E-05 36.0 4.5 82 39-122 5-93 (275)
405 4b79_A PA4098, probable short- 85.3 1.4 4.8E-05 35.1 5.5 78 39-122 10-87 (242)
406 4fs3_A Enoyl-[acyl-carrier-pro 85.3 1.4 4.9E-05 34.7 5.6 82 39-122 5-95 (256)
407 3gqv_A Enoyl reductase; medium 85.0 0.83 2.9E-05 38.2 4.2 72 38-119 163-237 (371)
408 3e8x_A Putative NAD-dependent 84.9 2.2 7.4E-05 32.7 6.3 72 40-122 21-93 (236)
409 3h2s_A Putative NADH-flavin re 84.7 4.5 0.00016 30.3 8.1 70 42-122 2-71 (224)
410 3fwz_A Inner membrane protein 84.6 0.49 1.7E-05 33.8 2.3 70 41-119 8-77 (140)
411 3e03_A Short chain dehydrogena 84.5 10 0.00034 29.9 10.4 81 39-122 5-99 (274)
412 3o26_A Salutaridine reductase; 84.4 1.7 5.8E-05 34.5 5.7 81 39-122 11-100 (311)
413 4a27_A Synaptic vesicle membra 84.4 0.82 2.8E-05 37.8 3.9 75 34-119 137-214 (349)
414 3rft_A Uronate dehydrogenase; 83.6 6.8 0.00023 30.6 8.9 71 41-123 4-74 (267)
415 3slk_A Polyketide synthase ext 83.4 1 3.4E-05 42.0 4.4 74 36-119 342-418 (795)
416 3tqh_A Quinone oxidoreductase; 83.4 0.47 1.6E-05 38.7 2.0 36 35-75 148-185 (321)
417 3grk_A Enoyl-(acyl-carrier-pro 83.2 0.34 1.1E-05 39.3 1.0 82 39-122 30-118 (293)
418 3ksu_A 3-oxoacyl-acyl carrier 82.7 5.2 0.00018 31.4 7.9 80 40-122 11-100 (262)
419 1dhr_A Dihydropteridine reduct 82.7 3.3 0.00011 32.0 6.6 75 38-122 5-85 (241)
420 1qsg_A Enoyl-[acyl-carrier-pro 82.6 1.1 3.9E-05 35.2 3.9 82 39-122 8-96 (265)
421 4e4y_A Short chain dehydrogena 82.1 13 0.00043 28.5 9.9 75 40-122 4-79 (244)
422 3orf_A Dihydropteridine reduct 81.9 4.3 0.00015 31.6 7.1 73 40-122 22-96 (251)
423 3d7l_A LIN1944 protein; APC893 81.9 5.4 0.00018 29.5 7.4 63 42-122 5-67 (202)
424 4dkj_A Cytosine-specific methy 81.0 0.33 1.1E-05 41.8 0.2 37 41-80 11-51 (403)
425 3pxx_A Carveol dehydrogenase; 80.9 0.97 3.3E-05 35.8 2.9 81 39-122 9-108 (287)
426 3mag_A VP39; methylated adenin 80.5 4 0.00014 33.8 6.5 55 39-94 60-114 (307)
427 3llv_A Exopolyphosphatase-rela 80.2 0.62 2.1E-05 33.0 1.4 71 40-119 6-76 (141)
428 2wyu_A Enoyl-[acyl carrier pro 79.7 0.75 2.6E-05 36.2 1.9 82 39-122 7-95 (261)
429 4egb_A DTDP-glucose 4,6-dehydr 79.7 3.2 0.00011 33.5 5.7 80 39-122 23-107 (346)
430 2gdz_A NAD+-dependent 15-hydro 79.3 2.7 9.1E-05 33.0 5.0 81 39-122 6-95 (267)
431 3edm_A Short chain dehydrogena 79.1 1.2 4.3E-05 35.0 3.0 81 39-122 7-95 (259)
432 1gu7_A Enoyl-[acyl-carrier-pro 78.8 2.7 9.2E-05 34.7 5.1 39 35-78 162-203 (364)
433 2hun_A 336AA long hypothetical 78.7 8.1 0.00028 30.8 7.9 76 41-122 4-84 (336)
434 2v6g_A Progesterone 5-beta-red 78.6 23 0.00078 28.4 10.7 74 41-121 2-80 (364)
435 3tpc_A Short chain alcohol deh 78.1 2.4 8.3E-05 33.1 4.4 81 39-122 6-90 (257)
436 2p91_A Enoyl-[acyl-carrier-pro 78.1 1.3 4.5E-05 35.3 2.9 82 39-122 20-108 (285)
437 3gpi_A NAD-dependent epimerase 78.0 3.2 0.00011 32.6 5.2 68 40-120 3-70 (286)
438 4imr_A 3-oxoacyl-(acyl-carrier 77.9 7.8 0.00027 30.7 7.5 80 39-122 32-118 (275)
439 3h7a_A Short chain dehydrogena 77.8 4.1 0.00014 31.8 5.7 80 39-122 6-92 (252)
440 1uay_A Type II 3-hydroxyacyl-C 77.7 5.7 0.0002 30.1 6.4 72 40-122 2-75 (242)
441 3r3s_A Oxidoreductase; structu 77.2 1.1 3.8E-05 36.1 2.2 81 39-122 48-137 (294)
442 3ic5_A Putative saccharopine d 77.1 1.2 4.2E-05 29.9 2.1 72 40-121 5-77 (118)
443 1zsy_A Mitochondrial 2-enoyl t 77.0 4.9 0.00017 33.1 6.2 40 33-77 161-203 (357)
444 3pi7_A NADH oxidoreductase; gr 76.3 0.58 2E-05 38.7 0.2 38 39-82 163-204 (349)
445 3rd5_A Mypaa.01249.C; ssgcid, 76.2 1.8 6.1E-05 34.6 3.2 79 39-122 15-95 (291)
446 3ruf_A WBGU; rossmann fold, UD 75.9 3.5 0.00012 33.3 5.0 74 40-121 25-108 (351)
447 2bka_A CC3, TAT-interacting pr 75.8 8.2 0.00028 29.2 6.9 74 40-122 18-93 (242)
448 3un1_A Probable oxidoreductase 75.8 9.7 0.00033 29.8 7.4 77 39-122 27-105 (260)
449 4e6p_A Probable sorbitol dehyd 75.8 2.7 9.1E-05 32.9 4.0 81 39-122 7-91 (259)
450 3rkr_A Short chain oxidoreduct 75.7 1.9 6.4E-05 33.9 3.1 81 39-122 28-115 (262)
451 3enk_A UDP-glucose 4-epimerase 75.7 2.9 0.0001 33.6 4.4 78 39-122 4-87 (341)
452 1sby_A Alcohol dehydrogenase; 75.6 3.8 0.00013 31.7 4.9 81 39-122 4-93 (254)
453 4ibo_A Gluconate dehydrogenase 75.6 1.2 4.2E-05 35.4 2.0 81 39-122 25-112 (271)
454 3is3_A 17BETA-hydroxysteroid d 75.5 4 0.00014 32.1 5.1 80 40-122 18-105 (270)
455 3svt_A Short-chain type dehydr 75.0 1.5 5.1E-05 34.9 2.4 81 39-122 10-100 (281)
456 3lyl_A 3-oxoacyl-(acyl-carrier 74.5 4 0.00014 31.4 4.7 80 40-122 5-91 (247)
457 4gkb_A 3-oxoacyl-[acyl-carrier 74.2 1.1 3.8E-05 35.9 1.5 81 39-122 6-92 (258)
458 3sx2_A Putative 3-ketoacyl-(ac 74.2 1.8 6.3E-05 34.2 2.7 81 39-122 12-111 (278)
459 1uls_A Putative 3-oxoacyl-acyl 73.9 4.8 0.00017 31.1 5.1 80 40-122 5-86 (245)
460 3t4x_A Oxidoreductase, short c 73.9 2.8 9.6E-05 33.0 3.8 79 39-122 9-94 (267)
461 4id9_A Short-chain dehydrogena 73.4 3.7 0.00013 33.1 4.4 69 39-122 18-86 (347)
462 1ej6_A Lambda2; icosahedral, n 73.1 3.1 0.00011 40.2 4.3 69 38-119 820-888 (1289)
463 3ucx_A Short chain dehydrogena 73.1 2.4 8.2E-05 33.3 3.1 81 39-122 10-97 (264)
464 3gaf_A 7-alpha-hydroxysteroid 73.0 1.1 3.8E-05 35.2 1.1 81 39-122 11-98 (256)
465 2fwm_X 2,3-dihydro-2,3-dihydro 72.8 18 0.00062 27.8 8.3 76 39-122 6-83 (250)
466 2a4k_A 3-oxoacyl-[acyl carrier 72.7 3.7 0.00013 32.3 4.2 80 40-122 6-89 (263)
467 3r1i_A Short-chain type dehydr 72.4 5.6 0.00019 31.5 5.2 81 39-122 31-118 (276)
468 2dtx_A Glucose 1-dehydrogenase 72.3 20 0.00067 28.0 8.4 74 40-122 8-83 (264)
469 3gem_A Short chain dehydrogena 72.2 0.87 3E-05 36.1 0.3 80 40-122 27-108 (260)
470 3ehe_A UDP-glucose 4-epimerase 72.1 32 0.0011 27.0 9.8 70 42-122 3-72 (313)
471 4fn4_A Short chain dehydrogena 71.6 2.1 7.2E-05 34.3 2.5 81 39-122 6-93 (254)
472 1ooe_A Dihydropteridine reduct 71.6 5.2 0.00018 30.6 4.7 73 40-122 3-81 (236)
473 1wg8_A Predicted S-adenosylmet 71.5 1.5 5.2E-05 36.0 1.6 27 138-182 210-236 (285)
474 3oid_A Enoyl-[acyl-carrier-pro 71.4 4.9 0.00017 31.4 4.7 81 39-122 3-91 (258)
475 1cyd_A Carbonyl reductase; sho 71.3 6 0.00021 30.1 5.0 79 39-122 6-85 (244)
476 3dhn_A NAD-dependent epimerase 71.1 4.7 0.00016 30.3 4.3 72 41-122 5-76 (227)
477 3kvo_A Hydroxysteroid dehydrog 70.8 18 0.00063 29.8 8.2 80 40-122 45-138 (346)
478 1vl8_A Gluconate 5-dehydrogena 70.3 4.9 0.00017 31.6 4.4 80 40-122 21-108 (267)
479 3r6d_A NAD-dependent epimerase 70.3 4.1 0.00014 30.7 3.8 73 42-122 7-82 (221)
480 3tka_A Ribosomal RNA small sub 70.0 1.7 5.8E-05 36.7 1.6 27 138-182 251-277 (347)
481 1yb1_A 17-beta-hydroxysteroid 70.0 6.5 0.00022 30.8 5.1 81 39-122 30-117 (272)
482 1ja9_A 4HNR, 1,3,6,8-tetrahydr 69.5 3.4 0.00011 32.2 3.2 81 39-122 20-108 (274)
483 3sju_A Keto reductase; short-c 69.4 4.9 0.00017 31.9 4.2 81 39-122 23-110 (279)
484 3slg_A PBGP3 protein; structur 69.3 7.2 0.00025 31.7 5.4 75 40-121 24-99 (372)
485 3o38_A Short chain dehydrogena 68.9 9.6 0.00033 29.6 5.9 81 39-122 21-110 (266)
486 3tjr_A Short chain dehydrogena 68.8 4.4 0.00015 32.6 3.9 81 39-122 30-117 (301)
487 1m6y_A S-adenosyl-methyltransf 68.8 2.5 8.7E-05 34.6 2.5 15 168-182 234-248 (301)
488 2o23_A HADH2 protein; HSD17B10 68.5 2.9 0.0001 32.4 2.7 81 39-122 11-95 (265)
489 3f1l_A Uncharacterized oxidore 68.5 6.4 0.00022 30.6 4.7 81 39-122 11-101 (252)
490 2aef_A Calcium-gated potassium 68.4 6.3 0.00022 30.2 4.6 69 40-119 9-77 (234)
491 3qiv_A Short-chain dehydrogena 68.3 1.6 5.5E-05 33.9 1.1 81 39-122 8-95 (253)
492 2b69_A UDP-glucuronate decarbo 68.1 23 0.0008 28.3 8.2 70 40-122 27-100 (343)
493 3sc4_A Short chain dehydrogena 67.9 41 0.0014 26.4 9.5 81 39-122 8-102 (285)
494 2nm0_A Probable 3-oxacyl-(acyl 67.7 8.5 0.00029 30.0 5.3 74 40-122 21-96 (253)
495 1nff_A Putative oxidoreductase 67.5 3.3 0.00011 32.5 2.8 81 39-122 6-90 (260)
496 4dqx_A Probable oxidoreductase 67.4 7.2 0.00025 30.9 4.9 81 39-122 26-110 (277)
497 3ko8_A NAD-dependent epimerase 67.2 23 0.00077 27.8 7.8 70 42-122 2-71 (312)
498 3tzq_B Short-chain type dehydr 67.1 6.5 0.00022 30.9 4.5 81 39-122 10-94 (271)
499 3lt0_A Enoyl-ACP reductase; tr 66.9 12 0.00041 30.3 6.3 36 40-77 2-38 (329)
500 4g65_A TRK system potassium up 66.8 1.9 6.5E-05 37.5 1.4 70 42-119 5-74 (461)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.91 E-value=5.3e-24 Score=167.93 Aligned_cols=139 Identities=26% Similarity=0.506 Sum_probs=117.7
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeee
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADV 96 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~ 96 (186)
.+|++|+++||.++...+..++++.+|||+|||+|.|+..+++. +++|+|+|+++... ..+++++++|+
T Consensus 3 ~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~------~~~V~gvD~~~~~~-----~~~v~~~~~D~ 71 (191)
T 3dou_A 3 LQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL------ARKIISIDLQEMEE-----IAGVRFIRCDI 71 (191)
T ss_dssp -CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT------CSEEEEEESSCCCC-----CTTCEEEECCT
T ss_pred CCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc------CCcEEEEecccccc-----CCCeEEEEccc
Confidence 57999999999999999999999999999999999999999987 48999999998642 24799999999
Q ss_pred cCCChh-hHhhhCC--CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCc
Q 038391 97 INLPSN-QVRALSP--KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGG 173 (186)
Q Consensus 97 ~~~~~~-~l~~~~~--~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG 173 (186)
.+.... .+.+... ..++||+|++|++|+..+.+..++....++.+.++..+.+ +|||||
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~------------------~LkpGG 133 (191)
T 3dou_A 72 FKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVR------------------YLRNGG 133 (191)
T ss_dssp TSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH------------------HEEEEE
T ss_pred cCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHH------------------HccCCC
Confidence 876532 2222110 0148999999999999999999988888899999999998 999999
Q ss_pred EEEEEEccCCC
Q 038391 174 HLVIKLLESQD 184 (186)
Q Consensus 174 ~lvi~~~~~~~ 184 (186)
+|++++|.+++
T Consensus 134 ~lv~k~~~~~~ 144 (191)
T 3dou_A 134 NVLLKQFQGDM 144 (191)
T ss_dssp EEEEEEECSTH
T ss_pred EEEEEEcCCCC
Confidence 99999998875
No 2
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.85 E-value=1.1e-20 Score=147.66 Aligned_cols=140 Identities=25% Similarity=0.455 Sum_probs=110.4
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeec
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVI 97 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~ 97 (186)
+|++|++++|.++...+..++++.+|||+|||+|.++..+++.+++ .+++|+|+|+++... ..+++++++|+.
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~--~~~~v~gvD~s~~~~-----~~~v~~~~~d~~ 73 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKN--YKNKIIGIDKKIMDP-----IPNVYFIQGEIG 73 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTT--SCEEEEEEESSCCCC-----CTTCEEEECCTT
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCC--CCceEEEEeCCccCC-----CCCceEEEcccc
Confidence 5899999999999999998899999999999999999999998741 037999999999532 246889999987
Q ss_pred CCCh------------------hhHhh-hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCC
Q 038391 98 NLPS------------------NQVRA-LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVN 158 (186)
Q Consensus 98 ~~~~------------------~~l~~-~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (186)
+... ..+.. + +..+||+|++++.++..+.+..++....++...++..+.+
T Consensus 74 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~--------- 142 (201)
T 2plw_A 74 KDNMNNIKNINYIDNMNNNSVDYKLKEIL--QDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQ--------- 142 (201)
T ss_dssp TTSSCCC-----------CHHHHHHHHHH--TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred chhhhhhccccccccccchhhHHHHHhhc--CCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHH---------
Confidence 6540 01111 1 3568999999987776666666666666666778888888
Q ss_pred CCCCCCCCcccccCcEEEEEEccCCC
Q 038391 159 NSDSSTDSGVLKPGGHLVIKLLESQD 184 (186)
Q Consensus 159 ~~~~~~~~~~LkpgG~lvi~~~~~~~ 184 (186)
+|||||+|+++++.+++
T Consensus 143 ---------~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 143 ---------YINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp ---------HEEEEEEEEEEEECSTT
T ss_pred ---------HccCCCEEEEEEeCCCC
Confidence 99999999999988654
No 3
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.83 E-value=3.5e-20 Score=144.04 Aligned_cols=143 Identities=31% Similarity=0.537 Sum_probs=111.5
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCC-----CCCCeEEEEeCCCCCCCCcCCCCCeEEE
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPL-----DNGGSVVGIDVKKVKVPSLHCDARVQTV 92 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~-----~~~~~v~gvDis~~~i~~~~~~~~~~~~ 92 (186)
+|++|+++++.++...+..++++.+|||+|||+|.++..+++.++.. .+.++|+|+|+++.+. ..+++++
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~ 75 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFL 75 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEE
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEE
Confidence 48999999999999999989999999999999999999999997520 0017999999999652 1357888
Q ss_pred -EeeecCCChh-hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccc
Q 038391 93 -SADVINLPSN-QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLK 170 (186)
Q Consensus 93 -~~d~~~~~~~-~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lk 170 (186)
++|+.+.... .+.... ++++||+|++++.++..+.+..+......+...++..+.+ +||
T Consensus 76 ~~~d~~~~~~~~~~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~Lk 136 (196)
T 2nyu_A 76 CPADVTDPRTSQRILEVL-PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPD------------------ILQ 136 (196)
T ss_dssp CSCCTTSHHHHHHHHHHS-GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH------------------HEE
T ss_pred EeccCCCHHHHHHHHHhc-CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHH------------------Hhc
Confidence 8887654211 111111 2458999999998888787777766666667788888888 999
Q ss_pred cCcEEEEEEccCCC
Q 038391 171 PGGHLVIKLLESQD 184 (186)
Q Consensus 171 pgG~lvi~~~~~~~ 184 (186)
|||+|+++++.+++
T Consensus 137 pgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 137 PGGTFLCKTWAGSQ 150 (196)
T ss_dssp EEEEEEEEECCSGG
T ss_pred CCCEEEEEecCCcc
Confidence 99999999987764
No 4
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.81 E-value=3.1e-20 Score=154.02 Aligned_cols=133 Identities=19% Similarity=0.173 Sum_probs=103.3
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----CCCCeEEE
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----CDARVQTV 92 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~~~~~~~~ 92 (186)
.+|++|++|||+++++.+ .++++.+|||||||+|+|+.++++..+ ...|+|+|+...+..... ...++.+.
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~g----v~sV~GvdvG~d~~~~pi~~~~~g~~ii~~ 143 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKN----VKKVMAFTLGVQGHEKPIMRTTLGWNLIRF 143 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTSCCCCCCCBTTGGGEEE
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcC----CCeeeeEEeccCccccccccccCCCceEEe
Confidence 469999999999999998 789999999999999999999998754 358999999876532211 12233333
Q ss_pred EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccC
Q 038391 93 SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPG 172 (186)
Q Consensus 93 ~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkpg 172 (186)
+.++.. ..+ +..++|+|+|||+|+ +|.+..|+..++++ ++.+.. +|+||
T Consensus 144 ~~~~dv------~~l--~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~------------------~Lk~g 192 (282)
T 3gcz_A 144 KDKTDV------FNM--EVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQ------------------WLQEG 192 (282)
T ss_dssp ECSCCG------GGS--CCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHH------------------HHHHH
T ss_pred eCCcch------hhc--CCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHH------------------HcCCC
Confidence 332211 111 357999999999999 99999998777766 777777 99999
Q ss_pred --cEEEEEEcc--CCCC
Q 038391 173 --GHLVIKLLE--SQDA 185 (186)
Q Consensus 173 --G~lvi~~~~--~~~~ 185 (186)
|.||+|+|. |+++
T Consensus 193 ~~G~Fv~KvF~pyg~~~ 209 (282)
T 3gcz_A 193 NYTEFCIKVLCPYTPLI 209 (282)
T ss_dssp CCCEEEEEESCCCSHHH
T ss_pred CCCcEEEEEecCCCccH
Confidence 999999999 7653
No 5
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.81 E-value=1e-19 Score=150.68 Aligned_cols=133 Identities=21% Similarity=0.247 Sum_probs=103.0
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC----CCCeEEE
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC----DARVQTV 92 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~----~~~~~~~ 92 (186)
.+|++|+++||+++.+. ..++++.+|||||||+|+|+.+++++.+ ...|+|+|+.-.+...... ..++.++
T Consensus 53 ~~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~----~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~ 127 (277)
T 3evf_A 53 GVAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKE----VSGVKGFTLGRDGHEKPMNVQSLGWNIITF 127 (277)
T ss_dssp CBCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTCCCCCCCCBTTGGGEEE
T ss_pred CCccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcC----CCcceeEEEeccCcccccccCcCCCCeEEE
Confidence 35999999999999999 6789999999999999999999998753 2578899988554211111 1245555
Q ss_pred EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccC
Q 038391 93 SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPG 172 (186)
Q Consensus 93 ~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkpg 172 (186)
+.++.... + ++++||+|+||++|+ +|.+..++..++++ ++++.+ +||||
T Consensus 128 ~~~~dv~~------l--~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~------------------~LkpG 176 (277)
T 3evf_A 128 KDKTDIHR------L--EPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEK------------------WLACG 176 (277)
T ss_dssp ECSCCTTT------S--CCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHH------------------HHTTC
T ss_pred eccceehh------c--CCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHH------------------HhCCC
Confidence 66542211 1 367899999999999 99999888776666 777777 99999
Q ss_pred -cEEEEEEcc--CCCC
Q 038391 173 -GHLVIKLLE--SQDA 185 (186)
Q Consensus 173 -G~lvi~~~~--~~~~ 185 (186)
|.||+|+|. |+++
T Consensus 177 ~G~FV~KVf~pyg~~~ 192 (277)
T 3evf_A 177 VDNFCVKVLAPYMPDV 192 (277)
T ss_dssp CSEEEEEESCTTSHHH
T ss_pred CCeEEEEecCCCCccH
Confidence 999999999 7653
No 6
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.80 E-value=1.4e-19 Score=148.31 Aligned_cols=129 Identities=22% Similarity=0.264 Sum_probs=97.7
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCC-CCeEEEEeCCCCCCCCcCCCCCe---EEE
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDN-GGSVVGIDVKKVKVPSLHCDARV---QTV 92 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~-~~~v~gvDis~~~i~~~~~~~~~---~~~ 92 (186)
.+|++|++|||.|+.+.+ +++|+.+||||||+||+|+.++++..+- +. .+.|+|+|+ + ..+......++ ++.
T Consensus 52 g~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~v-g~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~ 127 (269)
T 2px2_A 52 GHPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNV-QEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMK 127 (269)
T ss_dssp SCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTE-EEEEEECCCSTT-S-CCCCCCCSTTGGGEEEE
T ss_pred CCcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCC-CCceeEEEcccc-c-cCCCcccCCCceEEEee
Confidence 469999999999999998 8999999999999999999999997221 00 145556663 1 11111111334 333
Q ss_pred Ee-eecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCccccc
Q 038391 93 SA-DVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKP 171 (186)
Q Consensus 93 ~~-d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkp 171 (186)
++ |+.++ .+.++|+|+|||+|+ +|....|+..+++ +++.+.+ +|+|
T Consensus 128 ~G~Df~~~----------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~------------------~Lk~ 174 (269)
T 2px2_A 128 SGVDVFYK----------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSD------------------WLSR 174 (269)
T ss_dssp CSCCGGGS----------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHH------------------HHTT
T ss_pred ccCCccCC----------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHH------------------Hhhc
Confidence 46 88764 246899999999998 9999888877666 7788877 9999
Q ss_pred Cc-EEEEEEccC
Q 038391 172 GG-HLVIKLLES 182 (186)
Q Consensus 172 gG-~lvi~~~~~ 182 (186)
|| .|++|+|.+
T Consensus 175 gG~~FvvKVFqg 186 (269)
T 2px2_A 175 GPKEFCIKILCP 186 (269)
T ss_dssp CCSEEEEEESCT
T ss_pred CCcEEEEEECCC
Confidence 99 999999997
No 7
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.77 E-value=4.1e-18 Score=128.53 Aligned_cols=140 Identities=31% Similarity=0.518 Sum_probs=108.7
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeec
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVI 97 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~ 97 (186)
+|++|+.+++.++...+..++++.+|||+|||+|.++..+++.+++ +.+|+|+|+++ ++.. .+++++++|+.
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~---~~~v~~~D~~~-~~~~----~~~~~~~~d~~ 72 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGG---KGRIIACDLLP-MDPI----VGVDFLQGDFR 72 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCT---TCEEEEEESSC-CCCC----TTEEEEESCTT
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCC---CCeEEEEECcc-cccc----CcEEEEEcccc
Confidence 4888999999999999888889999999999999999999998753 47999999999 7654 57888888887
Q ss_pred CCCh-hhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 98 NLPS-NQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 98 ~~~~-~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
+.+. ..+.... +.++||+|+++.+++..+....+.....+.....+..+.+ +|||||.++
T Consensus 73 ~~~~~~~~~~~~-~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~L~~gG~l~ 133 (180)
T 1ej0_A 73 DELVMKALLERV-GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRD------------------VLAPGGSFV 133 (180)
T ss_dssp SHHHHHHHHHHH-TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH------------------HEEEEEEEE
T ss_pred cchhhhhhhccC-CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHH------------------HcCCCcEEE
Confidence 6431 0111101 3568999999887666665555554455555788888888 999999999
Q ss_pred EEEccCCC
Q 038391 177 IKLLESQD 184 (186)
Q Consensus 177 i~~~~~~~ 184 (186)
+..+..+.
T Consensus 134 ~~~~~~~~ 141 (180)
T 1ej0_A 134 VKVFQGEG 141 (180)
T ss_dssp EEEESSTT
T ss_pred EEEecCCc
Confidence 99887654
No 8
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.77 E-value=1.3e-18 Score=145.28 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=102.8
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCCCeEEE
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDARVQTV 92 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~~~~~~ 92 (186)
.+|++|+++||.++... ..++++.+||||||+||+|+.++++..+ ...|+|+|+...+.... ....++...
T Consensus 60 g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~g----v~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~ 134 (300)
T 3eld_A 60 GISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKE----VMSVKGYTLGIEGHEKPIHMQTLGWNIVKF 134 (300)
T ss_dssp CCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTSCCCCCCCBTTGGGEEE
T ss_pred CCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcC----CceeeeEEeccccccccccccccCCceEEe
Confidence 37999999999999999 8899999999999999999999998753 25899999986542221 112233333
Q ss_pred EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccC
Q 038391 93 SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPG 172 (186)
Q Consensus 93 ~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkpg 172 (186)
..++... .+ .+..+|+|+||++|+ +|.+..|+..+.++ +..+.. +|+||
T Consensus 135 ~~~~di~------~l--~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~------------------~LkpG 183 (300)
T 3eld_A 135 KDKSNVF------TM--PTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFER------------------WKHVN 183 (300)
T ss_dssp ECSCCTT------TS--CCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHH------------------HCCTT
T ss_pred ecCceee------ec--CCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHH------------------HhcCC
Confidence 3222111 11 357899999999999 99999998877777 777777 99999
Q ss_pred -cEEEEEEcc--CCCC
Q 038391 173 -GHLVIKLLE--SQDA 185 (186)
Q Consensus 173 -G~lvi~~~~--~~~~ 185 (186)
|.||+|+|. |+++
T Consensus 184 ~G~FV~KvF~~yG~~~ 199 (300)
T 3eld_A 184 TENFCVKVLAPYHPDV 199 (300)
T ss_dssp CCEEEEEESSTTSHHH
T ss_pred CCcEEEEeccccCccH
Confidence 999999999 8653
No 9
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.76 E-value=4e-18 Score=143.54 Aligned_cols=125 Identities=24% Similarity=0.327 Sum_probs=96.4
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeC----CCCCCCCc--CC--CCCe
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDV----KKVKVPSL--HC--DARV 89 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDi----s~~~i~~~--~~--~~~~ 89 (186)
+|++|.+++|.+++.. ..++++.+|||+|||||.++..+++. ++|+|+|+ ++.++... .. ..++
T Consensus 62 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~-------~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v 133 (305)
T 2p41_A 62 HAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL-------KNVREVKGLTKGGPGHEEPIPMSTYGWNLV 133 (305)
T ss_dssp CCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS-------TTEEEEEEECCCSTTSCCCCCCCSTTGGGE
T ss_pred CccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc-------CCEEEEeccccCchhHHHHHHhhhcCCCCe
Confidence 5899999999998888 66788999999999999999999986 58999999 56544321 11 2568
Q ss_pred EEEEe-eecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcc
Q 038391 90 QTVSA-DVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGV 168 (186)
Q Consensus 90 ~~~~~-d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (186)
+++++ |+..++ ..+||+|+||++++ .+.+..++.... .++..+.+ +
T Consensus 134 ~~~~~~D~~~l~----------~~~fD~V~sd~~~~-~g~~~~d~~~~l----~~L~~~~~------------------~ 180 (305)
T 2p41_A 134 RLQSGVDVFFIP----------PERCDTLLCDIGES-SPNPTVEAGRTL----RVLNLVEN------------------W 180 (305)
T ss_dssp EEECSCCTTTSC----------CCCCSEEEECCCCC-CSSHHHHHHHHH----HHHHHHHH------------------H
T ss_pred EEEeccccccCC----------cCCCCEEEECCccc-cCcchhhHHHHH----HHHHHHHH------------------H
Confidence 88888 776542 35899999999876 566655432221 46677777 9
Q ss_pred cccCcEEEEEEccCC
Q 038391 169 LKPGGHLVIKLLESQ 183 (186)
Q Consensus 169 LkpgG~lvi~~~~~~ 183 (186)
|||||.|++++|.++
T Consensus 181 LkpGG~~v~kv~~~~ 195 (305)
T 2p41_A 181 LSNNTQFCVKVLNPY 195 (305)
T ss_dssp CCTTCEEEEEESCCC
T ss_pred hCCCCEEEEEeCCCC
Confidence 999999999999874
No 10
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.75 E-value=3.4e-18 Score=141.39 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=93.9
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCC------Ce
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDA------RV 89 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~------~~ 89 (186)
.|++|++++|.++... ..++++.+|||+|||+|.|+..+++. ++|+|||+++ |+... .... ++
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~-------~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v 124 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR-------PHVMDVRAYT-LGVGGHEVPRITESYGWNI 124 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS-------TTEEEEEEEC-CCCSSCCCCCCCCBTTGGG
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc-------CcEEEEECch-hhhhhhhhhhhhhccCCCe
Confidence 4899999999998888 66788999999999999999999886 5899999999 53221 1111 67
Q ss_pred EEE--EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCc
Q 038391 90 QTV--SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSG 167 (186)
Q Consensus 90 ~~~--~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (186)
.++ ++|+.+++ +++||+|+||+. +..+.+..++... ..++..+.+
T Consensus 125 ~~~~~~~D~~~l~----------~~~fD~V~sd~~-~~~~~~~~d~~~~----l~~L~~~~r------------------ 171 (265)
T 2oxt_A 125 VKFKSRVDIHTLP----------VERTDVIMCDVG-ESSPKWSVESERT----IKILELLEK------------------ 171 (265)
T ss_dssp EEEECSCCTTTSC----------CCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHH------------------
T ss_pred EEEecccCHhHCC----------CCCCcEEEEeCc-ccCCccchhHHHH----HHHHHHHHH------------------
Confidence 888 88887642 468999999986 5555554443221 126777777
Q ss_pred ccccCc--EEEEEEcc
Q 038391 168 VLKPGG--HLVIKLLE 181 (186)
Q Consensus 168 ~LkpgG--~lvi~~~~ 181 (186)
+||||| .|++++|.
T Consensus 172 ~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 172 WKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHCTTCEEEEEESC
T ss_pred HhccCCCeEEEEEeCC
Confidence 999999 99999998
No 11
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.73 E-value=1.2e-17 Score=138.96 Aligned_cols=122 Identities=20% Similarity=0.267 Sum_probs=91.0
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC--CC------CCe
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH--CD------ARV 89 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~--~~------~~~ 89 (186)
.|++|.+++|.++... ..++++.+|||+|||+|.++..+++. ++|+|||+++ |+.... .. .++
T Consensus 62 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~-------~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v 132 (276)
T 2wa2_A 62 HAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ-------PNVREVKAYT-LGTSGHEKPRLVETFGWNL 132 (276)
T ss_dssp ---CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS-------TTEEEEEEEC-CCCTTSCCCCCCCCTTGGG
T ss_pred CcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc-------CCEEEEECch-hhhhhhhchhhhhhcCCCe
Confidence 4899999999998887 66788999999999999999999986 5899999999 532211 11 167
Q ss_pred EEE--EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCc
Q 038391 90 QTV--SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSG 167 (186)
Q Consensus 90 ~~~--~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (186)
.++ ++|+.+++ +++||+|+||+. +..+.+..++... ..++.++.+
T Consensus 133 ~~~~~~~D~~~l~----------~~~fD~Vvsd~~-~~~~~~~~d~~~~----l~~L~~~~r------------------ 179 (276)
T 2wa2_A 133 ITFKSKVDVTKME----------PFQADTVLCDIG-ESNPTAAVEASRT----LTVLNVISR------------------ 179 (276)
T ss_dssp EEEECSCCGGGCC----------CCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHH------------------
T ss_pred EEEeccCcHhhCC----------CCCcCEEEECCC-cCCCchhhhHHHH----HHHHHHHHH------------------
Confidence 888 88887642 468999999986 4545444443221 126777777
Q ss_pred ccccCc--EEEEEEcc
Q 038391 168 VLKPGG--HLVIKLLE 181 (186)
Q Consensus 168 ~LkpgG--~lvi~~~~ 181 (186)
+||||| .|++++|.
T Consensus 180 ~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 180 WLEYNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHSTTCEEEEEESC
T ss_pred HhccCCCcEEEEEeCC
Confidence 999999 99999997
No 12
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.72 E-value=9.2e-18 Score=138.10 Aligned_cols=133 Identities=16% Similarity=0.095 Sum_probs=89.5
Q ss_pred CCCCCChHHHHHHhhc-hhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC
Q 038391 3 GVGAPDFFYREAQRLG-YVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVP 81 (186)
Q Consensus 3 ~~~~~~~~~~~~~~~~-y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~ 81 (186)
+..+.|.|...+..+. ||....-.+.+.+..+. ..+.+|||+|||+|.++..+++. +.+|+|+|+|+.|++
T Consensus 4 ms~f~d~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~------~~~v~gvD~s~~ml~ 75 (257)
T 4hg2_A 4 MAAFKDHFTPVADAYRAFRPRYPRALFRWLGEVA--PARGDALDCGCGSGQASLGLAEF------FERVHAVDPGEAQIR 75 (257)
T ss_dssp ----------------CCCCCCCHHHHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTT------CSEEEEEESCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh------CCEEEEEeCcHHhhh
Confidence 4456788887766532 34332334555555433 45679999999999999999987 479999999999998
Q ss_pred CcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCC
Q 038391 82 SLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSD 161 (186)
Q Consensus 82 ~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (186)
.+....+++++++|+.+++. ++++||+|++... .|..+ ...++.++.+
T Consensus 76 ~a~~~~~v~~~~~~~e~~~~--------~~~sfD~v~~~~~-----~h~~~-------~~~~~~e~~r------------ 123 (257)
T 4hg2_A 76 QALRHPRVTYAVAPAEDTGL--------PPASVDVAIAAQA-----MHWFD-------LDRFWAELRR------------ 123 (257)
T ss_dssp TCCCCTTEEEEECCTTCCCC--------CSSCEEEEEECSC-----CTTCC-------HHHHHHHHHH------------
T ss_pred hhhhcCCceeehhhhhhhcc--------cCCcccEEEEeee-----hhHhh-------HHHHHHHHHH------------
Confidence 87777899999999877653 4689999999543 34444 3467888888
Q ss_pred CCCCCcccccCcEEEEEEcc
Q 038391 162 SSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 162 ~~~~~~~LkpgG~lvi~~~~ 181 (186)
+|||||+|++..+.
T Consensus 124 ------vLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 124 ------VARPGAVFAAVTYG 137 (257)
T ss_dssp ------HEEEEEEEEEEEEC
T ss_pred ------HcCCCCEEEEEECC
Confidence 99999999987664
No 13
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.68 E-value=5e-16 Score=125.86 Aligned_cols=129 Identities=23% Similarity=0.275 Sum_probs=101.1
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEE
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQT 91 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~ 91 (186)
.+|++|+++||.++++.+ .++++.+||||||+||+|+.+++.+.+. .+|+|+|+-..-.+. ...-..++|
T Consensus 57 g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~----~~V~avdvG~~ghe~P~~~~s~gwn~v~f 131 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKV----TEVRGYTKGGPGHEEPVPMSTYGWNIVKL 131 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTE----EEEEEECCCSTTSCCCCCCCCTTTTSEEE
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCC----CEEEEEecCCCCccCcchhhhcCcCceEE
Confidence 369999999999999999 7899999999999999999999988643 589999998765432 122245888
Q ss_pred EEe-eecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccc
Q 038391 92 VSA-DVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLK 170 (186)
Q Consensus 92 ~~~-d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lk 170 (186)
.++ |+.... ..++|.|+||+.+ .++....+... ...+++.+.+ .|+
T Consensus 132 k~gvDv~~~~----------~~~~DtllcDIge-Ss~~~~vE~~R----tlrvLela~~------------------wL~ 178 (267)
T 3p8z_A 132 MSGKDVFYLP----------PEKCDTLLCDIGE-SSPSPTVEESR----TIRVLKMVEP------------------WLK 178 (267)
T ss_dssp ECSCCGGGCC----------CCCCSEEEECCCC-CCSCHHHHHHH----HHHHHHHHGG------------------GCS
T ss_pred EeccceeecC----------CccccEEEEecCC-CCCChhhhhhH----HHHHHHHHHH------------------hcc
Confidence 887 764442 3679999999987 55555544433 3348888888 999
Q ss_pred cCcEEEEEEccCCC
Q 038391 171 PGGHLVIKLLESQD 184 (186)
Q Consensus 171 pgG~lvi~~~~~~~ 184 (186)
+ |.|+||+|++.+
T Consensus 179 ~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 179 N-NQFCIKVLNPYM 191 (267)
T ss_dssp S-CEEEEEESCCCS
T ss_pred c-CCEEEEEccCCC
Confidence 8 899999999875
No 14
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.61 E-value=9.7e-16 Score=124.66 Aligned_cols=123 Identities=19% Similarity=0.266 Sum_probs=90.7
Q ss_pred chhhhhHH--hHHHHHHH-c--CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCC
Q 038391 18 GYVARSAF--KLLQIQKQ-Y--KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDAR 88 (186)
Q Consensus 18 ~y~~r~~~--~l~~~~~~-~--~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~ 88 (186)
.||.+.++ ||...+.. . ..++||.+|||+|||+|.++..+++.+++ .++|+|+|+++.|+.. +....+
T Consensus 51 e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~---~G~V~avD~s~~~~~~l~~~a~~~~n 127 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGP---RGRIYGVEFAPRVMRDLLTVVRDRRN 127 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCT---TCEEEEEECCHHHHHHHHHHSTTCTT
T ss_pred eeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCC---CceEEEEeCCHHHHHHHHHhhHhhcC
Confidence 36655544 66654433 1 23699999999999999999999999986 7999999999999754 334468
Q ss_pred eEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcc
Q 038391 89 VQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGV 168 (186)
Q Consensus 89 ~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (186)
+..+.+|....... ....+++|+|+++.. .+ . ....++.++.+ .
T Consensus 128 i~~V~~d~~~p~~~-----~~~~~~vDvVf~d~~-----~~--~------~~~~~l~~~~r------------------~ 171 (233)
T 4df3_A 128 IFPILGDARFPEKY-----RHLVEGVDGLYADVA-----QP--E------QAAIVVRNARF------------------F 171 (233)
T ss_dssp EEEEESCTTCGGGG-----TTTCCCEEEEEECCC-----CT--T------HHHHHHHHHHH------------------H
T ss_pred eeEEEEeccCcccc-----ccccceEEEEEEecc-----CC--h------hHHHHHHHHHH------------------h
Confidence 88998887654321 113578999998753 11 1 14567888887 9
Q ss_pred cccCcEEEEEE
Q 038391 169 LKPGGHLVIKL 179 (186)
Q Consensus 169 LkpgG~lvi~~ 179 (186)
|||||+++|.+
T Consensus 172 LKpGG~lvI~i 182 (233)
T 4df3_A 172 LRDGGYMLMAI 182 (233)
T ss_dssp EEEEEEEEEEE
T ss_pred ccCCCEEEEEE
Confidence 99999999875
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.60 E-value=5.8e-16 Score=123.21 Aligned_cols=132 Identities=8% Similarity=0.099 Sum_probs=82.2
Q ss_pred CChHHHHHHhhchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC--
Q 038391 7 PDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-- 84 (186)
Q Consensus 7 ~~~~~~~~~~~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-- 84 (186)
.++|+...+.+.|..........+...+....++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~ 83 (250)
T 2p7i_A 10 QEIKDTAGHKYAYNFDFDVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH------FNDITCVEASEEAISHAQGR 83 (250)
T ss_dssp -------------CHHHHTHHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT------CSCEEEEESCHHHHHHHHHH
T ss_pred HHHHhhHHHHhcCccchhhHHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh------CCcEEEEeCCHHHHHHHHHh
Confidence 567776666655533221111122233332346789999999999999999986 468999999999875521
Q ss_pred CCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHc-CCcccCCCCCCCCCC
Q 038391 85 CDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLAL-GPAALASPVNNSDSS 163 (186)
Q Consensus 85 ~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 163 (186)
...+++++++|+.+.. ++++||+|++... ..|..+ ...++.++. +
T Consensus 84 ~~~~v~~~~~d~~~~~---------~~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~~-------------- 129 (250)
T 2p7i_A 84 LKDGITYIHSRFEDAQ---------LPRRYDNIVLTHV----LEHIDD-------PVALLKRINDD-------------- 129 (250)
T ss_dssp SCSCEEEEESCGGGCC---------CSSCEEEEEEESC----GGGCSS-------HHHHHHHHHHT--------------
T ss_pred hhCCeEEEEccHHHcC---------cCCcccEEEEhhH----HHhhcC-------HHHHHHHHHHH--------------
Confidence 1127899999887652 3578999999532 122222 357888888 8
Q ss_pred CCCcccccCcEEEEEEccC
Q 038391 164 TDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 164 ~~~~~LkpgG~lvi~~~~~ 182 (186)
+|||||+|++.....
T Consensus 130 ----~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 130 ----WLAEGGRLFLVCPNA 144 (250)
T ss_dssp ----TEEEEEEEEEEEECT
T ss_pred ----hcCCCCEEEEEcCCh
Confidence 999999999988654
No 16
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.59 E-value=4.2e-15 Score=124.51 Aligned_cols=119 Identities=21% Similarity=0.243 Sum_probs=89.3
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-cCCCCCeEEE-Eee
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-LHCDARVQTV-SAD 95 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-~~~~~~~~~~-~~d 95 (186)
.|.+|..++|.+++..+....++.+|||+|||||.++..+++. + ..+|+|+|+++.|+.. .....++... ..|
T Consensus 64 ~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g----a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~n 138 (291)
T 3hp7_A 64 RYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G----AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYN 138 (291)
T ss_dssp CSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEECSSSSCSCHHHHTCTTEEEECSCC
T ss_pred ccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C----CCEEEEEECCHHHHHHHHHhCcccceecccC
Confidence 5999999999999999886567889999999999999999987 2 3699999999999976 3334455433 345
Q ss_pred ecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEE
Q 038391 96 VINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHL 175 (186)
Q Consensus 96 ~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~l 175 (186)
+..+....+ +..+||+|++|..+. .. ..++.++.+ +|||||.|
T Consensus 139 i~~l~~~~l-----~~~~fD~v~~d~sf~-----sl---------~~vL~e~~r------------------vLkpGG~l 181 (291)
T 3hp7_A 139 FRYAEPVDF-----TEGLPSFASIDVSFI-----SL---------NLILPALAK------------------ILVDGGQV 181 (291)
T ss_dssp GGGCCGGGC-----TTCCCSEEEECCSSS-----CG---------GGTHHHHHH------------------HSCTTCEE
T ss_pred ceecchhhC-----CCCCCCEEEEEeeHh-----hH---------HHHHHHHHH------------------HcCcCCEE
Confidence 544433221 234599999987421 11 357777777 99999999
Q ss_pred EEE
Q 038391 176 VIK 178 (186)
Q Consensus 176 vi~ 178 (186)
++.
T Consensus 182 v~l 184 (291)
T 3hp7_A 182 VAL 184 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.58 E-value=5.5e-15 Score=121.58 Aligned_cols=106 Identities=20% Similarity=0.352 Sum_probs=81.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+++|.+|||+|||+|..+..+++.+.. ++.+|+|||+|+.|++.+ ....+++++++|+.+++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~--~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~--------- 136 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH--DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--------- 136 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS--SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC---------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC--CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc---------
Confidence 589999999999999999999998754 367999999999997652 33458999999987764
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
-++||+|++... .+.... .....++.++.+ .|||||.|++....
T Consensus 137 -~~~~d~v~~~~~-----l~~~~~----~~~~~~l~~i~~------------------~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 -IENASMVVLNFT-----LQFLEP----SERQALLDKIYQ------------------GLNPGGALVLSEKF 180 (261)
T ss_dssp -CCSEEEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEEB
T ss_pred -ccccccceeeee-----eeecCc----hhHhHHHHHHHH------------------HcCCCcEEEEEecc
Confidence 347999998542 222221 123467788887 99999999987543
No 18
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.57 E-value=1.6e-15 Score=123.26 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC----CcCCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVP----SLHCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~----~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
+++|.+|||+|||+|.++..+++.+++ .++|+|+|+++.|+. .+....++.++++|+...... .. ..+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~---~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~--~~---~~~ 145 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIEL---NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSY--KS---VVE 145 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTT---TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGT--TT---TCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCC---CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhh--hc---ccc
Confidence 688999999999999999999999875 689999999998752 222235799999998754321 00 135
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+||+|++|++. .+ ....+...+.+ .|||||+|++.+..
T Consensus 146 ~~D~I~~d~a~-------~~------~~~il~~~~~~------------------~LkpGG~lvisik~ 183 (232)
T 3id6_C 146 NVDVLYVDIAQ-------PD------QTDIAIYNAKF------------------FLKVNGDMLLVIKA 183 (232)
T ss_dssp CEEEEEECCCC-------TT------HHHHHHHHHHH------------------HEEEEEEEEEEEC-
T ss_pred ceEEEEecCCC-------hh------HHHHHHHHHHH------------------hCCCCeEEEEEEcc
Confidence 89999998752 22 13344555666 89999999998643
No 19
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.55 E-value=2.3e-15 Score=118.71 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=76.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------------------CCCCeEEEEeeecC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------------------CDARVQTVSADVIN 98 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------------------~~~~~~~~~~d~~~ 98 (186)
++++.+|||+|||+|..+..++++ +.+|+|+|+|+.|++.++ ...+++++++|+.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 93 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 93 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence 567889999999999999999997 579999999999976521 13579999999988
Q ss_pred CChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 99 LPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 99 ~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
++... .++||+|++... .+... ......++.++.+ +|||||++++.
T Consensus 94 l~~~~-------~~~fD~v~~~~~-----l~~l~----~~~~~~~l~~~~r------------------~LkpgG~~~l~ 139 (203)
T 1pjz_A 94 LTARD-------IGHCAAFYDRAA-----MIALP----ADMRERYVQHLEA------------------LMPQACSGLLI 139 (203)
T ss_dssp STHHH-------HHSEEEEEEESC-----GGGSC----HHHHHHHHHHHHH------------------HSCSEEEEEEE
T ss_pred CCccc-------CCCEEEEEECcc-----hhhCC----HHHHHHHHHHHHH------------------HcCCCcEEEEE
Confidence 76431 158999998432 22222 1234567788887 99999984444
Q ss_pred E
Q 038391 179 L 179 (186)
Q Consensus 179 ~ 179 (186)
+
T Consensus 140 ~ 140 (203)
T 1pjz_A 140 T 140 (203)
T ss_dssp E
T ss_pred E
Confidence 4
No 20
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=6.1e-15 Score=120.06 Aligned_cols=102 Identities=15% Similarity=0.191 Sum_probs=80.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+|+.++..+....+++++++|+.+.+. +.++||+
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~--------~~~~fD~ 97 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQ------GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLAL--------PDKSVDG 97 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTT------TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCS--------CTTCBSE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhC------CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCC--------CCCCEeE
Confidence 577899999999999999999973 58999999999998765554589999999877643 3579999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
|++... ..+..+ ...++.++.+ +|| ||++++..+..
T Consensus 98 v~~~~~----l~~~~~-------~~~~l~~~~~------------------~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 98 VISILA----IHHFSH-------LEKSFQEMQR------------------IIR-DGTIVLLTFDI 133 (261)
T ss_dssp EEEESC----GGGCSS-------HHHHHHHHHH------------------HBC-SSCEEEEEECG
T ss_pred EEEcch----HhhccC-------HHHHHHHHHH------------------HhC-CcEEEEEEcCC
Confidence 999542 122222 4577888888 999 99999887764
No 21
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.54 E-value=2.2e-14 Score=119.48 Aligned_cols=127 Identities=21% Similarity=0.296 Sum_probs=94.5
Q ss_pred chhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCC-CCeEEE
Q 038391 18 GYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCD-ARVQTV 92 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~-~~~~~~ 92 (186)
+|++|+++||.+++..+ .++++.+||||||+||+|+.+++.+.+. .+|+|+|+-..-.+. .... .-+.+.
T Consensus 74 ~y~SR~~~KL~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~gv----~~V~avdvG~~~he~P~~~~ql~w~lV~~~ 148 (321)
T 3lkz_A 74 HPVSRGTAKLRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKRV----QEVRGYTKGGPGHEEPQLVQSYGWNIVTMK 148 (321)
T ss_dssp CCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTTE----EEEEEECCCSTTSCCCCCCCBTTGGGEEEE
T ss_pred CccchHHHHHHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcCC----CEEEEEEcCCCCccCcchhhhcCCcceEEE
Confidence 49999999999999994 5789999999999999999999988642 479999998874221 1111 126666
Q ss_pred Ee-eecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCccccc
Q 038391 93 SA-DVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKP 171 (186)
Q Consensus 93 ~~-d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkp 171 (186)
.+ |+..+. ...+|+|+||+. ..++....+.. ....+++.+.+ .|++
T Consensus 149 ~~~Dv~~l~----------~~~~D~ivcDig-eSs~~~~ve~~----Rtl~vLel~~~------------------wL~~ 195 (321)
T 3lkz_A 149 SGVDVFYRP----------SECCDTLLCDIG-ESSSSAEVEEH----RTIRVLEMVED------------------WLHR 195 (321)
T ss_dssp CSCCTTSSC----------CCCCSEEEECCC-CCCSCHHHHHH----HHHHHHHHHHH------------------HHTT
T ss_pred eccCHhhCC----------CCCCCEEEEECc-cCCCChhhhhh----HHHHHHHHHHH------------------Hhcc
Confidence 65 665443 357999999986 34444444432 23347777777 9999
Q ss_pred C-cEEEEEEccC
Q 038391 172 G-GHLVIKLLES 182 (186)
Q Consensus 172 g-G~lvi~~~~~ 182 (186)
| |.|+||+|++
T Consensus 196 ~~~~f~~KVl~p 207 (321)
T 3lkz_A 196 GPREFCVKVLCP 207 (321)
T ss_dssp CCCEEEEEESCT
T ss_pred CCCcEEEEEcCC
Confidence 9 9999999998
No 22
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=1.9e-14 Score=114.43 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=94.1
Q ss_pred CCCCCCCChHHHHHHhhchhhhhH---H-hHHH-HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeC
Q 038391 1 MSGVGAPDFFYREAQRLGYVARSA---F-KLLQ-IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDV 75 (186)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~y~~r~~---~-~l~~-~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDi 75 (186)
|+.....+.|+..+..++-..+.. + .+.+ +.......+++.+|||+|||+|.++..+++..+ +.+|+|+|+
T Consensus 1 M~~~~~~~~f~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~ 76 (234)
T 3dtn_A 1 MSLSEIKRKFDAVSGKYDEQRRKFIPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYP----EATFTLVDM 76 (234)
T ss_dssp --CCSSCCCCCHHHHHHHHHHHHHCTTHHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCT----TCEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHhCcCHHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCC----CCeEEEEEC
Confidence 565666777776665533221111 1 2222 333333356788999999999999999999863 579999999
Q ss_pred CCCCCCCc----CCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCc
Q 038391 76 KKVKVPSL----HCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPA 151 (186)
Q Consensus 76 s~~~i~~~----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (186)
++.++..+ ....+++++++|+.+.+. .++||+|++... .+.... .....++.++.+
T Consensus 77 s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~---------~~~fD~v~~~~~-----l~~~~~----~~~~~~l~~~~~-- 136 (234)
T 3dtn_A 77 SEKMLEIAKNRFRGNLKVKYIEADYSKYDF---------EEKYDMVVSALS-----IHHLED----EDKKELYKRSYS-- 136 (234)
T ss_dssp CHHHHHHHHHHTCSCTTEEEEESCTTTCCC---------CSCEEEEEEESC-----GGGSCH----HHHHHHHHHHHH--
T ss_pred CHHHHHHHHHhhccCCCEEEEeCchhccCC---------CCCceEEEEeCc-----cccCCH----HHHHHHHHHHHH--
Confidence 99986541 122379999999877642 368999999542 222221 112357777777
Q ss_pred ccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 152 ALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 152 ~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+|||||.|++..+..
T Consensus 137 ----------------~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 137 ----------------ILKESGIFINADLVH 151 (234)
T ss_dssp ----------------HEEEEEEEEEEEECB
T ss_pred ----------------hcCCCcEEEEEEecC
Confidence 999999999987543
No 23
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.54 E-value=1.1e-14 Score=119.25 Aligned_cols=104 Identities=15% Similarity=0.258 Sum_probs=77.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----C-------------------CCCCeEEEE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----H-------------------CDARVQTVS 93 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~-------------------~~~~~~~~~ 93 (186)
.+++.+|||+|||+|..+..+++. +.+|+|||+|+.|++.+ . ...++++++
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 139 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYC 139 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEE
Confidence 457889999999999999999997 57999999999997642 1 125799999
Q ss_pred eeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCc
Q 038391 94 ADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGG 173 (186)
Q Consensus 94 ~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG 173 (186)
+|+.+++.. ..++||+|++..... +.. . .....++..+.+ +|||||
T Consensus 140 ~D~~~l~~~-------~~~~FD~V~~~~~l~----~l~-~----~~~~~~l~~~~~------------------~LkpGG 185 (252)
T 2gb4_A 140 CSIFDLPRA-------NIGKFDRIWDRGALV----AIN-P----GDHDRYADIILS------------------LLRKEF 185 (252)
T ss_dssp SCTTTGGGG-------CCCCEEEEEESSSTT----TSC-G----GGHHHHHHHHHH------------------TEEEEE
T ss_pred CccccCCcc-------cCCCEEEEEEhhhhh----hCC-H----HHHHHHHHHHHH------------------HcCCCe
Confidence 999876532 126899999854311 111 1 124467777777 999999
Q ss_pred EEEEEEc
Q 038391 174 HLVIKLL 180 (186)
Q Consensus 174 ~lvi~~~ 180 (186)
+|++.++
T Consensus 186 ~l~l~~~ 192 (252)
T 2gb4_A 186 QYLVAVL 192 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9976554
No 24
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=4e-15 Score=114.57 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+. ...++++++.+...+.. + .
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~-----~--~ 86 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL------SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDH-----Y--V 86 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGG-----T--C
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHh-----h--c
Confidence 578999999999999999999987 489999999999976521 12678888866654321 1 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
.++||+|+++......+.+.. ....+.....+..+.+ +|||||++++..+.+.
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~------------------~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSV--ITKPHTTLEAIEKILD------------------RLEVGGRLAIMIYYGH 139 (185)
T ss_dssp CSCEEEEEEEEC-------------CHHHHHHHHHHHHH------------------HEEEEEEEEEEEC---
T ss_pred cCCcCEEEEeCCCCCCcchhc--ccChhhHHHHHHHHHH------------------hcCCCcEEEEEEeCCC
Confidence 568999998742111100000 0111234466777777 9999999999998754
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.53 E-value=3.1e-14 Score=111.49 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=85.3
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCChhhH
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~~~l 104 (186)
+..+......++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~---- 103 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL------ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWT---- 103 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCC----
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCC----
Confidence 3345555555778889999999999999999998 47999999999987652 22357999999987651
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+.++||+|++... .+.... .....++..+.+ +|||||.+++..+..
T Consensus 104 -----~~~~~D~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 -----PDRQWDAVFFAHW-----LAHVPD----DRFEAFWESVRS------------------AVAPGGVVEFVDVTD 149 (218)
T ss_dssp -----CSSCEEEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEECC
T ss_pred -----CCCceeEEEEech-----hhcCCH----HHHHHHHHHHHH------------------HcCCCeEEEEEeCCC
Confidence 3679999999532 222221 223567777777 999999999987654
No 26
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.52 E-value=1.9e-14 Score=111.79 Aligned_cols=117 Identities=19% Similarity=0.284 Sum_probs=83.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++.+++ .++|+|+|+++.++..+ ....+++++++|+.+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------- 89 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGE---NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY------- 89 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCT---TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT-------
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh-------
Confidence 578899999999999999999999753 47999999999997552 1235799999998655321
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
..++||+|+++.+.-..+.+... ...+....++..+.+ +|||||++++..+.+.
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~------------------~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSIS--TRPETTIQALSKAME------------------LLVTGGIITVVIYYGG 143 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCB--CCHHHHHHHHHHHHH------------------HEEEEEEEEEEECCBT
T ss_pred ccCCceEEEEcCCcccCcccccc--cCcccHHHHHHHHHH------------------hCcCCCEEEEEEccCC
Confidence 34789999998642111111110 011123457777887 9999999999987653
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.51 E-value=1.1e-14 Score=116.71 Aligned_cols=111 Identities=20% Similarity=0.323 Sum_probs=79.9
Q ss_pred HHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 32 KQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 32 ~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.....++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+... ++++++|+.+.. ..+ +.
T Consensus 34 ~~l~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~----~~~--~~ 99 (240)
T 3dli_A 34 RYIPYFKGCRRVLDIGCGRGEFLELCKEE------GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYL----KSL--PD 99 (240)
T ss_dssp GGGGGTTTCSCEEEETCTTTHHHHHHHHH------TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHH----HTS--CT
T ss_pred HHHhhhcCCCeEEEEeCCCCHHHHHHHhC------CCcEEEEECCHHHHHHHHhh--cceeeccHHHHh----hhc--CC
Confidence 33444678899999999999999999987 47899999999997664332 777777765421 111 36
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
++||+|++... .+.... .....++..+.+ +|||||.+++.+...+
T Consensus 100 ~~fD~i~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 100 KYLDGVMISHF-----VEHLDP----ERLFELLSLCYS------------------KMKYSSYIVIESPNPT 144 (240)
T ss_dssp TCBSEEEEESC-----GGGSCG----GGHHHHHHHHHH------------------HBCTTCCEEEEEECTT
T ss_pred CCeeEEEECCc-----hhhCCc----HHHHHHHHHHHH------------------HcCCCcEEEEEeCCcc
Confidence 79999999532 222211 114577888887 9999999999987654
No 28
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.51 E-value=3.8e-14 Score=114.00 Aligned_cols=102 Identities=25% Similarity=0.298 Sum_probs=79.2
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+ +.+|+|+|+++.+++.+ ....+++++++|+.+.+.
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~------- 100 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDH-----GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA------- 100 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHT-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-------
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc-----CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-------
Confidence 46889999999999999999999986 36999999999997542 223579999999876542
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.++||+|++... ..+..+ ...++.++.+ +|||||+|++...
T Consensus 101 --~~~fD~V~~~~~----~~~~~~-------~~~~l~~~~r------------------~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 101 --NEKCDVAACVGA----TWIAGG-------FAGAEELLAQ------------------SLKPGGIMLIGEP 141 (256)
T ss_dssp --SSCEEEEEEESC----GGGTSS-------SHHHHHHHTT------------------SEEEEEEEEEEEE
T ss_pred --CCCCCEEEECCC----hHhcCC-------HHHHHHHHHH------------------HcCCCeEEEEecC
Confidence 468999998432 122222 4578888888 9999999999753
No 29
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.51 E-value=1.6e-14 Score=120.87 Aligned_cols=111 Identities=20% Similarity=0.259 Sum_probs=84.0
Q ss_pred CCCCCCEEEEEcccC------ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEE-EEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAP------GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQT-VSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~------G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~-~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+ |. ..+++.++. +++|+|+|+++. + .++++ +++|+.++..
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~---~~~V~gvDis~~-v------~~v~~~i~gD~~~~~~------- 120 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPT---GTLLVDSDLNDF-V------SDADSTLIGDCATVHT------- 120 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCT---TCEEEEEESSCC-B------CSSSEEEESCGGGCCC-------
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCC---CCEEEEEECCCC-C------CCCEEEEECccccCCc-------
Confidence 468899999999944 66 666777653 589999999998 3 36888 9999976542
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCCC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQDA 185 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~ 185 (186)
.++||+|++|+.++..+.+..+.....++...++.++.+ +|||||+|+++++++.+.
T Consensus 121 --~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r------------------~LkpGG~~v~~~~~~~~~ 177 (290)
T 2xyq_A 121 --ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQ------------------KLALGGSIAVKITEHSWN 177 (290)
T ss_dssp --SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHH------------------HEEEEEEEEEEECSSSCC
T ss_pred --cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHH------------------hcCCCcEEEEEEeccCCH
Confidence 358999999987666666655544444556688888888 999999999999887653
No 30
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.50 E-value=2.6e-14 Score=115.08 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=81.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----CCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----CDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++.+ +.+|+|+|+++.++..+. ...+++++++|+.+.+. +.+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~--------~~~ 119 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-----GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF--------PEN 119 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCC--------CTT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCC--------CCC
Confidence 5778899999999999999999986 379999999999875421 11689999999877643 357
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+||+|++... .+... ......++..+.+ +|||||.+++..+...
T Consensus 120 ~fD~v~~~~~-----l~~~~----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 120 NFDLIYSRDA-----ILALS----LENKNKLFQKCYK------------------WLKPTGTLLITDYCAT 163 (266)
T ss_dssp CEEEEEEESC-----GGGSC----HHHHHHHHHHHHH------------------HEEEEEEEEEEEEEES
T ss_pred cEEEEeHHHH-----HHhcC----hHHHHHHHHHHHH------------------HcCCCCEEEEEEeccC
Confidence 9999999532 22221 1225677888887 9999999999887544
No 31
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.50 E-value=2.5e-14 Score=120.51 Aligned_cols=115 Identities=28% Similarity=0.351 Sum_probs=85.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|.++..+++.+++ +++|+|+|+++.++... ....+++++++|+..+.. .
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~---~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~--------~ 184 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRN---DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE--------L 184 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTT---CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG--------G
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC---CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc--------c
Confidence 678999999999999999999998754 58999999999986541 122368888888876532 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchH-----------HHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAA-----------LSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.++||+|++|++|+..|....+.. .........+..+.+ +|||||+|++.+
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~------------------~LkpGG~lv~st 246 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLE------------------VLKPGGILVYST 246 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHH------------------hCCCCCEEEEEe
Confidence 458999999999877765433221 112334577777877 999999999976
Q ss_pred c
Q 038391 180 L 180 (186)
Q Consensus 180 ~ 180 (186)
.
T Consensus 247 c 247 (315)
T 1ixk_A 247 C 247 (315)
T ss_dssp S
T ss_pred C
Confidence 4
No 32
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=2.9e-14 Score=115.59 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+++. .++||+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~---------~~~fD~ 113 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS------FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL---------GRRFSA 113 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT------SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC---------SCCEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc---------cCCcCE
Confidence 56789999999999999999987 469999999999976522 22378999999877642 468999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
|++... ..+ +....+....++..+.+ +|||||.|+|..+.
T Consensus 114 v~~~~~----~l~---~~~~~~~~~~~l~~~~~------------------~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 114 VTCMFS----SIG---HLAGQAELDAALERFAA------------------HVLPDGVVVVEPWW 153 (263)
T ss_dssp EEECTT----GGG---GSCHHHHHHHHHHHHHH------------------TEEEEEEEEECCCC
T ss_pred EEEcCc----hhh---hcCCHHHHHHHHHHHHH------------------hcCCCcEEEEEecc
Confidence 999431 111 11122335677888887 99999999997543
No 33
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.49 E-value=1.1e-14 Score=114.37 Aligned_cols=108 Identities=16% Similarity=0.215 Sum_probs=81.2
Q ss_pred cCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 34 YKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
...++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+....++.+..+|+..++ ..++
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~---------~~~~ 102 (211)
T 3e23_A 38 LGELPAGAKILELGCGAGYQAEAMLAA------GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLD---------AIDA 102 (211)
T ss_dssp HTTSCTTCEEEESSCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC---------CCSC
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHc------CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCC---------CCCc
Confidence 344678899999999999999999987 4799999999999765333225777888877654 3579
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
||+|++... .+... .+....++..+.+ +|||||++++....++
T Consensus 103 fD~v~~~~~-----l~~~~----~~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 103 YDAVWAHAC-----LLHVP----RDELADVLKLIWR------------------ALKPGGLFYASYKSGE 145 (211)
T ss_dssp EEEEEECSC-----GGGSC----HHHHHHHHHHHHH------------------HEEEEEEEEEEEECCS
T ss_pred EEEEEecCc-----hhhcC----HHHHHHHHHHHHH------------------hcCCCcEEEEEEcCCC
Confidence 999999542 22221 1225577778887 9999999999977654
No 34
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.49 E-value=5.4e-14 Score=112.07 Aligned_cols=103 Identities=25% Similarity=0.363 Sum_probs=80.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc---CCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL---HCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~---~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+.+. +.++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~--------~~~~ 116 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT------GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPF--------ENEQ 116 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSS--------CTTC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCC--------CCCC
Confidence 467889999999999999999997 47999999999987552 234679999999887642 3579
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
||+|++... ..+..+ ....+..+.+ +|||||.+++..+..
T Consensus 117 fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 117 FEAIMAINS----LEWTEE-------PLRALNEIKR------------------VLKSDGYACIAILGP 156 (242)
T ss_dssp EEEEEEESC----TTSSSC-------HHHHHHHHHH------------------HEEEEEEEEEEEECT
T ss_pred ccEEEEcCh----HhhccC-------HHHHHHHHHH------------------HhCCCeEEEEEEcCC
Confidence 999999542 122222 3467777887 999999999998654
No 35
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=8.1e-14 Score=111.99 Aligned_cols=103 Identities=21% Similarity=0.301 Sum_probs=75.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.+++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+.+. .
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~---------~ 103 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF---------K 103 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC---------C
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc---------C
Confidence 356789999999999999999986 47999999999997652 122368999999876542 3
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++||+|++... ..+... .+....++..+.+ +|||||.+++.+.
T Consensus 104 ~~fD~v~~~~~----~~~~~~----~~~~~~~l~~~~~------------------~L~pgG~li~~~~ 146 (252)
T 1wzn_A 104 NEFDAVTMFFS----TIMYFD----EEDLRKLFSKVAE------------------ALKPGGVFITDFP 146 (252)
T ss_dssp SCEEEEEECSS----GGGGSC----HHHHHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred CCccEEEEcCC----chhcCC----HHHHHHHHHHHHH------------------HcCCCeEEEEecc
Confidence 68999998421 111111 1235567777777 9999999998753
No 36
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.49 E-value=2.5e-14 Score=112.48 Aligned_cols=114 Identities=21% Similarity=0.258 Sum_probs=83.0
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCCCeEEEEeeecCCChh
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDARVQTVSADVINLPSN 102 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~~~~~~~~d~~~~~~~ 102 (186)
+..++.......++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+..
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-- 110 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH------CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-- 110 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC--
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC--
Confidence 3344444444567789999999999999999987 46999999999987541 22347999999987764
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|++... ..+..+ .+....++..+.+ +|||||.|++....
T Consensus 111 -------~~~~fD~v~~~~~----l~~~~~----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 111 -------TAELFDLIVVAEV----LYYLED----MTQMRTAIDNMVK------------------MLAPGGHLVFGSAR 156 (216)
T ss_dssp -------CSCCEEEEEEESC----GGGSSS----HHHHHHHHHHHHH------------------TEEEEEEEEEEEEC
T ss_pred -------CCCCccEEEEccH----HHhCCC----HHHHHHHHHHHHH------------------HcCCCCEEEEEecC
Confidence 2579999999532 122222 2234567788887 99999999997643
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.49 E-value=8.2e-14 Score=112.12 Aligned_cols=109 Identities=20% Similarity=0.322 Sum_probs=83.2
Q ss_pred HHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCCh
Q 038391 29 QIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPS 101 (186)
Q Consensus 29 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~ 101 (186)
.++.....++++.+|||+|||+|.++..+++.. ..+|+|+|+++.++.. .....+++++++|+.+++.
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYV-----KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF 110 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHC-----CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhC-----CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC
Confidence 344444456788999999999999999999985 2499999999998754 2233469999999876643
Q ss_pred hhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 102 NQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 102 ~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+.++||+|++... .+..+ ...++..+.+ +|||||++++...
T Consensus 111 --------~~~~fD~v~~~~~-----l~~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 111 --------QNEELDLIWSEGA-----IYNIG-------FERGMNEWSK------------------YLKKGGFIAVSEA 151 (257)
T ss_dssp --------CTTCEEEEEEESC-----SCCCC-------HHHHHHHHHT------------------TEEEEEEEEEEEE
T ss_pred --------CCCCEEEEEecCh-----HhhcC-------HHHHHHHHHH------------------HcCCCcEEEEEEe
Confidence 3579999999643 22223 3467888888 9999999999874
No 38
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.48 E-value=2.9e-14 Score=111.91 Aligned_cols=105 Identities=26% Similarity=0.386 Sum_probs=77.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+....++.+...|+.+.... ......+||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~~fD~v 120 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR------GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEA----KVPVGKDYDLI 120 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTT----CSCCCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC------CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhccc----ccccCCCccEE
Confidence 45689999999999999999987 479999999999987644446677777776543100 01134569999
Q ss_pred EeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 118 LSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 118 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
++..... ..+ ...++..+.+ +|||||+|++..++.
T Consensus 121 ~~~~~l~-----~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 121 CANFALL-----HQD-------IIELLSAMRT------------------LLVPGGALVIQTLHP 155 (227)
T ss_dssp EEESCCC-----SSC-------CHHHHHHHHH------------------TEEEEEEEEEEECCT
T ss_pred EECchhh-----hhh-------HHHHHHHHHH------------------HhCCCeEEEEEecCc
Confidence 9965422 122 3467777887 999999999998754
No 39
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.47 E-value=2.5e-14 Score=126.44 Aligned_cols=116 Identities=22% Similarity=0.211 Sum_probs=87.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|+++..+++.+++ .++|+++|+++.++... ....++.++++|...+... .
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~---~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~-------~ 172 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKG---KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH-------F 172 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTT---CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH-------H
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCC---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh-------c
Confidence 578999999999999999999999864 57999999999986541 1224678888877544211 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHH-----------HHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSV-----------ELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.++||+|++|++|+..|....+..... .+....+..+.+ +|||||+|+..+
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~------------------~LkpGG~LvYsT 234 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIK------------------MLKNKGQLIYST 234 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHH------------------TEEEEEEEEEEE
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHH------------------hcCCCcEEEEEE
Confidence 468999999999988887655443322 334467777777 999999999865
Q ss_pred c
Q 038391 180 L 180 (186)
Q Consensus 180 ~ 180 (186)
-
T Consensus 235 C 235 (456)
T 3m4x_A 235 C 235 (456)
T ss_dssp S
T ss_pred e
Confidence 4
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.47 E-value=9.3e-14 Score=112.99 Aligned_cols=109 Identities=21% Similarity=0.238 Sum_probs=83.0
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChh
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSN 102 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~ 102 (186)
++.....++++.+|||+|||+|.++..+++. + +.+|+|+|+++.++.. .....+++++++|+.+++.
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 110 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-V----TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF- 110 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-C----SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC-
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-c----CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC-
Confidence 3344344678899999999999999999997 2 4799999999998654 2233579999999977642
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|++... .+..+ ...++..+.+ +|||||++++....
T Consensus 111 -------~~~~fD~i~~~~~-----~~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 111 -------RNEELDLIWSEGA-----IYNIG-------FERGLNEWRK------------------YLKKGGYLAVSECS 152 (267)
T ss_dssp -------CTTCEEEEEESSC-----GGGTC-------HHHHHHHHGG------------------GEEEEEEEEEEEEE
T ss_pred -------CCCCEEEEEEcCC-----ceecC-------HHHHHHHHHH------------------HcCCCCEEEEEEee
Confidence 3579999999543 22222 4567888888 99999999998753
No 41
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.47 E-value=2.8e-14 Score=115.49 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=82.3
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCC
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLP 100 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~ 100 (186)
+..+..... ++++.+|||+|||+|.++..+++. ..+|+|+|+++.|+..+. ...+++++++|+.+++
T Consensus 26 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 26 LAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPF------VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP 98 (260)
T ss_dssp HHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGG------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC
T ss_pred HHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHh------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC
Confidence 333444433 567889999999999999999987 369999999999976521 2247899999987764
Q ss_pred hhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 101 SNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 101 ~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
. ++++||+|++... ..|..+ ...++.++.+ +|||||+|++..+
T Consensus 99 ~--------~~~~fD~V~~~~~----l~~~~d-------~~~~l~~~~r------------------~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 99 F--------TDERFHIVTCRIA----AHHFPN-------PASFVSEAYR------------------VLKKGGQLLLVDN 141 (260)
T ss_dssp S--------CTTCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred C--------CCCCEEEEEEhhh----hHhcCC-------HHHHHHHHHH------------------HcCCCCEEEEEEc
Confidence 3 3579999999642 233333 3477888887 9999999999765
Q ss_pred cC
Q 038391 181 ES 182 (186)
Q Consensus 181 ~~ 182 (186)
..
T Consensus 142 ~~ 143 (260)
T 1vl5_A 142 SA 143 (260)
T ss_dssp EB
T ss_pred CC
Confidence 43
No 42
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.46 E-value=7.5e-14 Score=113.78 Aligned_cols=114 Identities=21% Similarity=0.316 Sum_probs=86.1
Q ss_pred hHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCC
Q 038391 26 KLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINL 99 (186)
Q Consensus 26 ~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~ 99 (186)
.+.+++.....++++.+|||+|||+|.++..+++..+ +.+|+|+|+++.++..+ ....+++++++|+.++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNP----DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL 99 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC
Confidence 4555666666678899999999999999999999853 58999999999987542 1224799999998776
Q ss_pred ChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 100 PSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 100 ~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+. +.++||+|++... ..+..+ ...++..+.+ +|||||++++..
T Consensus 100 ~~--------~~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~ 142 (276)
T 3mgg_A 100 PF--------EDSSFDHIFVCFV----LEHLQS-------PEEALKSLKK------------------VLKPGGTITVIE 142 (276)
T ss_dssp CS--------CTTCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred CC--------CCCCeeEEEEech----hhhcCC-------HHHHHHHHHH------------------HcCCCcEEEEEE
Confidence 43 3579999999542 222223 3467777787 999999999976
Q ss_pred c
Q 038391 180 L 180 (186)
Q Consensus 180 ~ 180 (186)
.
T Consensus 143 ~ 143 (276)
T 3mgg_A 143 G 143 (276)
T ss_dssp E
T ss_pred c
Confidence 4
No 43
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.46 E-value=8.7e-14 Score=115.17 Aligned_cols=119 Identities=16% Similarity=0.208 Sum_probs=85.6
Q ss_pred hHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--------CCCCCeEEEEeeec
Q 038391 26 KLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--------HCDARVQTVSADVI 97 (186)
Q Consensus 26 ~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--------~~~~~~~~~~~d~~ 97 (186)
.+.+.+..+. .+++.+|||+|||+|.++..+++.+.. +.+|+|+|+++.++..+ ....+++++++|+.
T Consensus 24 ~~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 24 DFYKMIDEYH-DGERKLLVDVGCGPGTATLQMAQELKP---FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHHC-CSCCSEEEEETCTTTHHHHHHHHHSSC---CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHHh-cCCCCEEEEECCCCCHHHHHHHHhCCC---CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 4555555543 257889999999999999999987632 58999999999997652 12568999999998
Q ss_pred CCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 98 NLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 98 ~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
+++......+ ..++||+|++... .+..+ ...++..+.+ +|||||.|++
T Consensus 100 ~~~~~~~~~~--~~~~fD~V~~~~~-----l~~~~-------~~~~l~~~~~------------------~LkpgG~l~i 147 (299)
T 3g5t_A 100 DFKFLGADSV--DKQKIDMITAVEC-----AHWFD-------FEKFQRSAYA------------------NLRKDGTIAI 147 (299)
T ss_dssp CCGGGCTTTT--TSSCEEEEEEESC-----GGGSC-------HHHHHHHHHH------------------HEEEEEEEEE
T ss_pred hCCccccccc--cCCCeeEEeHhhH-----HHHhC-------HHHHHHHHHH------------------hcCCCcEEEE
Confidence 7653210000 1279999999542 22223 4577888887 9999999998
Q ss_pred EEc
Q 038391 178 KLL 180 (186)
Q Consensus 178 ~~~ 180 (186)
..+
T Consensus 148 ~~~ 150 (299)
T 3g5t_A 148 WGY 150 (299)
T ss_dssp EEE
T ss_pred Eec
Confidence 443
No 44
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.46 E-value=2.3e-13 Score=114.17 Aligned_cols=109 Identities=11% Similarity=0.123 Sum_probs=81.8
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCC
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINL 99 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~ 99 (186)
+.+.......++++.+|||+|||+|.++..++.+.. +++|+|+|+++.|++.+ .. .+++++++|+.++
T Consensus 110 l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~----ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l 184 (298)
T 3fpf_A 110 LLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVY----GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI 184 (298)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTT----CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG
T ss_pred HHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHcc----CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC
Confidence 343333455689999999999999988866555432 58999999999997652 23 6899999998764
Q ss_pred ChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 100 PSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 100 ~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+ +++||+|++... ..+ ...++.++.+ +|||||+|++..
T Consensus 185 ~----------d~~FDvV~~~a~-------~~d-------~~~~l~el~r------------------~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 185 D----------GLEFDVLMVAAL-------AEP-------KRRVFRNIHR------------------YVDTETRIIYRT 222 (298)
T ss_dssp G----------GCCCSEEEECTT-------CSC-------HHHHHHHHHH------------------HCCTTCEEEEEE
T ss_pred C----------CCCcCEEEECCC-------ccC-------HHHHHHHHHH------------------HcCCCcEEEEEc
Confidence 2 468999998431 122 4578888888 999999999987
Q ss_pred ccC
Q 038391 180 LES 182 (186)
Q Consensus 180 ~~~ 182 (186)
.++
T Consensus 223 ~~~ 225 (298)
T 3fpf_A 223 YTG 225 (298)
T ss_dssp CCG
T ss_pred Ccc
Confidence 665
No 45
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.46 E-value=2.9e-13 Score=109.91 Aligned_cols=105 Identities=26% Similarity=0.333 Sum_probs=81.2
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.. +.+|+|+|+++.++..+ ....+++++.+|+.+++.
T Consensus 58 ~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------- 125 (273)
T 3bus_A 58 DVRSGDRVLDVGCGIGKPAVRLATAR-----DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF------- 125 (273)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHS-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-------
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC-------
Confidence 35788999999999999999999875 47999999999986541 234579999999877643
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
++++||+|++... ..+..+ ...++..+.+ +|||||++++..+..
T Consensus 126 -~~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 126 -EDASFDAVWALES----LHHMPD-------RGRALREMAR------------------VLRPGGTVAIADFVL 169 (273)
T ss_dssp -CTTCEEEEEEESC----TTTSSC-------HHHHHHHHHT------------------TEEEEEEEEEEEEEE
T ss_pred -CCCCccEEEEech----hhhCCC-------HHHHHHHHHH------------------HcCCCeEEEEEEeec
Confidence 3578999998542 122223 3577888888 999999999987653
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=1.3e-13 Score=111.06 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=77.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc---CCCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL---HCDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~---~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.++..+ ....+++++++|+.+++. +.++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~--------~~~~f 109 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG-----AKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAI--------EPDAY 109 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCC--------CTTCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC-----CCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCC--------CCCCe
Confidence 468899999999999999999872 23999999999987552 124679999999876642 35799
Q ss_pred cEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 115 SVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 115 D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
|+|++... ..+..+ ...++..+.+ +|||||.|++.+.
T Consensus 110 D~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 110 NVVLSSLA----LHYIAS-------FDDICKKVYI------------------NLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred EEEEEchh----hhhhhh-------HHHHHHHHHH------------------HcCCCcEEEEEeC
Confidence 99999542 112222 4577888887 9999999999854
No 47
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.46 E-value=5.3e-14 Score=111.93 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=74.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++.++ +++|+|+|+|+.|++. +....++.++.+|+...... .. ..+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~----~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~----~~-~~~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD----EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY----SG-IVE 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT----TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT----TT-TCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC----CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhh----cc-ccc
Confidence 57889999999999999999999864 3799999999986432 22234688888877653110 00 136
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+||+|+++.. . .+ ....++.++.+ +|||||+|++.+
T Consensus 126 ~fD~V~~~~~-----~--~~------~~~~~l~~~~r------------------~LkpgG~l~i~~ 161 (210)
T 1nt2_A 126 KVDLIYQDIA-----Q--KN------QIEILKANAEF------------------FLKEKGEVVIMV 161 (210)
T ss_dssp CEEEEEECCC-----S--TT------HHHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred ceeEEEEecc-----C--hh------HHHHHHHHHHH------------------HhCCCCEEEEEE
Confidence 8999999742 1 11 13345777787 999999999985
No 48
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.46 E-value=8.1e-14 Score=109.62 Aligned_cols=113 Identities=21% Similarity=0.289 Sum_probs=84.2
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhh
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQ 103 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~ 103 (186)
+..... ++++.+|||+|||+|.++..+++..++ ..+|+|+|+++.++..+ ....+++++++|+.+.+.
T Consensus 29 ~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-- 102 (219)
T 3dh0_A 29 VLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGE---KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL-- 102 (219)
T ss_dssp HHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS--
T ss_pred HHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC--
Confidence 334433 577889999999999999999999743 47999999999987542 122379999999876642
Q ss_pred HhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 104 VRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+.++||+|++... ..+..+ ...++..+.+ +|||||.+++..+...
T Consensus 103 ------~~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 103 ------PDNTVDFIFMAFT----FHELSE-------PLKFLEELKR------------------VAKPFAYLAIIDWKKE 147 (219)
T ss_dssp ------CSSCEEEEEEESC----GGGCSS-------HHHHHHHHHH------------------HEEEEEEEEEEEECSS
T ss_pred ------CCCCeeEEEeehh----hhhcCC-------HHHHHHHHHH------------------HhCCCeEEEEEEeccc
Confidence 3578999999542 112222 3567788887 9999999999877644
No 49
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.46 E-value=3.9e-14 Score=114.07 Aligned_cols=101 Identities=21% Similarity=0.243 Sum_probs=77.8
Q ss_pred CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 35 KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
..++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....++++.++|+.+.+.
T Consensus 35 ~~~~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-------- 100 (263)
T 2yqz_A 35 HPKGEEPVFLELGVGTGRIALPLIAR------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPL-------- 100 (263)
T ss_dssp CCSSSCCEEEEETCTTSTTHHHHHTT------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCS--------
T ss_pred cCCCCCCEEEEeCCcCCHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCC--------
Confidence 34678899999999999999999986 47999999999997552 224679999999876542
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
++++||+|++... .+.... ...++.++.+ +|||||.+++.
T Consensus 101 ~~~~fD~v~~~~~-----l~~~~~------~~~~l~~~~~------------------~L~pgG~l~~~ 140 (263)
T 2yqz_A 101 PDESVHGVIVVHL-----WHLVPD------WPKVLAEAIR------------------VLKPGGALLEG 140 (263)
T ss_dssp CTTCEEEEEEESC-----GGGCTT------HHHHHHHHHH------------------HEEEEEEEEEE
T ss_pred CCCCeeEEEECCc-----hhhcCC------HHHHHHHHHH------------------HCCCCcEEEEE
Confidence 3578999999542 222211 4567777887 99999999987
No 50
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.46 E-value=3.6e-14 Score=125.71 Aligned_cols=115 Identities=28% Similarity=0.304 Sum_probs=85.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|+++..+++.+++ .++|+++|+++.++... .... +.++++|+..+... .
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~---~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~-------~ 167 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGG---KGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA-------F 167 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTT---CSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH-------H
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh-------c
Confidence 578999999999999999999999864 57999999999997541 1122 77888877554211 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchH-----------HHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAA-----------LSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.++||+|++|++|+..|....+.. ....+....+..+.+ +|||||+|+..+
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~------------------~LkpGG~LvysT 229 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASR------------------LLGPGGVLVYST 229 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHT------------------TEEEEEEEEEEE
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHH------------------hcCCCcEEEEEe
Confidence 468999999999887776433221 123345678888888 999999999865
Q ss_pred c
Q 038391 180 L 180 (186)
Q Consensus 180 ~ 180 (186)
-
T Consensus 230 C 230 (464)
T 3m6w_A 230 C 230 (464)
T ss_dssp S
T ss_pred c
Confidence 4
No 51
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.45 E-value=1.6e-13 Score=107.15 Aligned_cols=102 Identities=25% Similarity=0.278 Sum_probs=77.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++ +|||+|||+|.++..+++. + +.+|+|+|+++.++..+ ....+++++++|+.+++.
T Consensus 42 ~~~~-~vLdiG~G~G~~~~~l~~~-~----~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------- 107 (219)
T 3dlc_A 42 ITAG-TCIDIGSGPGALSIALAKQ-S----DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI-------- 107 (219)
T ss_dssp CCEE-EEEEETCTTSHHHHHHHHH-S----EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS--------
T ss_pred CCCC-EEEEECCCCCHHHHHHHHc-C----CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC--------
Confidence 4555 9999999999999999998 2 47999999999987541 234579999999877653
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|+++.. ..+..+ ...++..+.+ +|||||.+++....
T Consensus 108 ~~~~~D~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 108 EDNYADLIVSRGS----VFFWED-------VATAFREIYR------------------ILKSGGKTYIGGGF 150 (219)
T ss_dssp CTTCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEECC
T ss_pred CcccccEEEECch----HhhccC-------HHHHHHHHHH------------------hCCCCCEEEEEecc
Confidence 3579999999642 122222 4567788887 99999999997543
No 52
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.45 E-value=1.2e-13 Score=109.62 Aligned_cols=105 Identities=22% Similarity=0.250 Sum_probs=77.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+++.+|||+|||+|.++..+++.. .+|+|+|+++.++..+. ...+++++++|+.+.+ ..++||+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~------~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~---------~~~~~D~ 103 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF------GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFR---------LGRKFSA 103 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH------SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC---------CSSCEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC------CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc---------cCCCCcE
Confidence 678899999999999999999984 58999999999976532 2246889999887653 1468999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
|+|... ...+..+ .+....++..+.+ +|||||.+++..+..
T Consensus 104 v~~~~~---~~~~~~~----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 104 VVSMFS---SVGYLKT----TEELGAAVASFAE------------------HLEPGGVVVVEPWWF 144 (239)
T ss_dssp EEECTT---GGGGCCS----HHHHHHHHHHHHH------------------TEEEEEEEEECCCCC
T ss_pred EEEcCc---hHhhcCC----HHHHHHHHHHHHH------------------hcCCCeEEEEEeccC
Confidence 996321 1112211 1235567777777 999999999987654
No 53
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.44 E-value=9.7e-14 Score=115.68 Aligned_cols=111 Identities=20% Similarity=0.260 Sum_probs=89.3
Q ss_pred CCCCCEEEEEcc------cCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGC------APGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGc------G~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++.+.+|||+|| .||.+ +++++.+ .++.|+++|+.+-.... . .++++|+.... .
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~---VLr~~~p--~g~~VVavDL~~~~sda-----~-~~IqGD~~~~~---------~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA---VLRQWLP--TGTLLVDSDLNDFVSDA-----D-STLIGDCATVH---------T 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH---HHHHHSC--TTCEEEEEESSCCBCSS-----S-EEEESCGGGEE---------E
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH---HHHHhCC--CCcEEEEeeCcccccCC-----C-eEEEccccccc---------c
Confidence 477999999996 78873 4444444 14699999999976322 2 45899986532 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCCC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQDA 185 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~ 185 (186)
+++||+|++||+|+.+|....++..+..+.+.+++.+.+ .|+|||.|++|+|.|++.
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~------------------~LkpGGsFvVKVFQGsg~ 223 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQ------------------KLALGGSIAVKITEHSWN 223 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHH------------------HEEEEEEEEEEECSSSCC
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHH------------------hCcCCCEEEEEEecCCCH
Confidence 478999999999999999777777788899999999998 999999999999999874
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.44 E-value=1.4e-13 Score=114.88 Aligned_cols=104 Identities=17% Similarity=0.241 Sum_probs=81.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++.+ +.+|+|+|+++.+++.+ ....+++++++|+.+++.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------- 181 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-----GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF-------- 181 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC--------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC--------
Confidence 6788999999999999999999986 47999999999997542 233579999999877642
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+.++||+|++... .+..+ ....+..+.+ +|||||+|++..+...
T Consensus 182 ~~~~fD~V~~~~~-----l~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 182 DKGAVTASWNNES-----TMYVD-------LHDLFSEHSR------------------FLKVGGRYVTITGCWN 225 (312)
T ss_dssp CTTCEEEEEEESC-----GGGSC-------HHHHHHHHHH------------------HEEEEEEEEEEEEEEC
T ss_pred CCCCEeEEEECCc-----hhhCC-------HHHHHHHHHH------------------HcCCCcEEEEEEcccc
Confidence 3579999999432 22222 5577888887 9999999999876544
No 55
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=6.1e-14 Score=109.25 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=79.3
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
+.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+++. +.++||+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~--------~~~~fD~v~ 107 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL------GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSD--------SPKRWAGLL 107 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT------TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGG--------SCCCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhCCCCeEEeCccccccc--------CCCCeEEEE
Confidence 789999999999999999997 469999999999976532 24578999998876542 357999999
Q ss_pred eCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCC
Q 038391 119 SDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQD 184 (186)
Q Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~ 184 (186)
+.... .+.. .+....++..+.+ +|||||.+++..+..+.
T Consensus 108 ~~~~l----~~~~-----~~~~~~~l~~~~~------------------~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 108 AWYSL----IHMG-----PGELPDALVALRM------------------AVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp EESSS----TTCC-----TTTHHHHHHHHHH------------------TEEEEEEEEEEEECCSS
T ss_pred ehhhH----hcCC-----HHHHHHHHHHHHH------------------HcCCCcEEEEEEccCCc
Confidence 95421 1211 0114577778887 99999999999887653
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.44 E-value=6e-13 Score=110.22 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=80.7
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.++..+ ....+++++++|+.++
T Consensus 69 ~~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------- 134 (302)
T 3hem_A 69 NLEPGMTLLDIGCGWGSTMRHAVAEY-----DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--------- 134 (302)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---------
T ss_pred CCCCcCEEEEeeccCcHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---------
Confidence 36789999999999999999999987 37999999999997541 2334799999988654
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchH--HHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAA--LSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
.++||+|++.... .+..+.. ...+.....+..+.+ +|||||++++..+..+
T Consensus 135 --~~~fD~v~~~~~~----~~~~d~~~~~~~~~~~~~l~~~~~------------------~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 --DEPVDRIVSLGAF----EHFADGAGDAGFERYDTFFKKFYN------------------LTPDDGRMLLHTITIP 187 (302)
T ss_dssp --CCCCSEEEEESCG----GGTTCCSSCCCTTHHHHHHHHHHH------------------SSCTTCEEEEEEEECC
T ss_pred --CCCccEEEEcchH----HhcCccccccchhHHHHHHHHHHH------------------hcCCCcEEEEEEEecc
Confidence 3689999995421 1111100 001224577888887 9999999999887654
No 57
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.44 E-value=3.6e-13 Score=109.00 Aligned_cols=121 Identities=23% Similarity=0.278 Sum_probs=82.6
Q ss_pred hchhhhhHHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-CCCCCeEEE-Ee
Q 038391 17 LGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-HCDARVQTV-SA 94 (186)
Q Consensus 17 ~~y~~r~~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-~~~~~~~~~-~~ 94 (186)
..|.+|..++|..++..+....++.+|||+|||+|.++..+++. + ..+|+|+|+++.|+..+ ....++... ..
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g----~~~V~gvDis~~ml~~a~~~~~~~~~~~~~ 89 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-G----AKLVYALDVGTNQLAWKIRSDERVVVMEQF 89 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEECSSCCCCCHHHHTCTTEEEECSC
T ss_pred CCccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-C----CCEEEEEcCCHHHHHHHHHhCccccccccc
Confidence 35999999999999998876566889999999999999999987 2 25999999999998862 222333322 12
Q ss_pred eecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcE
Q 038391 95 DVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGH 174 (186)
Q Consensus 95 d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~ 174 (186)
++.......+ ....||.+.+|..... ...++.++.+ +|||||.
T Consensus 90 ~~~~~~~~~~-----~~~~~d~~~~D~v~~~--------------l~~~l~~i~r------------------vLkpgG~ 132 (232)
T 3opn_A 90 NFRNAVLADF-----EQGRPSFTSIDVSFIS--------------LDLILPPLYE------------------ILEKNGE 132 (232)
T ss_dssp CGGGCCGGGC-----CSCCCSEEEECCSSSC--------------GGGTHHHHHH------------------HSCTTCE
T ss_pred eEEEeCHhHc-----CcCCCCEEEEEEEhhh--------------HHHHHHHHHH------------------hccCCCE
Confidence 2322221111 1113566666542111 1357777777 9999999
Q ss_pred EEEEE
Q 038391 175 LVIKL 179 (186)
Q Consensus 175 lvi~~ 179 (186)
|++.+
T Consensus 133 lv~~~ 137 (232)
T 3opn_A 133 VAALI 137 (232)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99853
No 58
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.44 E-value=1.1e-13 Score=114.85 Aligned_cols=112 Identities=22% Similarity=0.240 Sum_probs=79.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC---------------------------------
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH--------------------------------- 84 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~--------------------------------- 84 (186)
.++.+|||+|||+|.++..+++.++ ..+|+|+|+++.++..+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~----~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG----PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC----CSEEEEEESCHHHHHHHHHTC------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 3578999999999999999999985 479999999998864310
Q ss_pred -------------------------------CCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccch
Q 038391 85 -------------------------------CDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDA 133 (186)
Q Consensus 85 -------------------------------~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~ 133 (186)
...+++|+++|+....... ..+ ..++||+|+|.. ......-
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~-~~~--~~~~fD~I~~~~-----vl~~ihl 192 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDL-VEA--QTPEYDVVLCLS-----LTKWVHL 192 (292)
T ss_dssp ---------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHH-HTT--CCCCEEEEEEES-----CHHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccccceEEecccccCcccc-ccc--cCCCcCEEEECh-----HHHHhhh
Confidence 0047999999987654221 111 357999999932 1211111
Q ss_pred HHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 134 ALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
....+....++..+.+ +|||||+|++..
T Consensus 193 ~~~~~~~~~~l~~~~~------------------~LkpGG~lil~~ 220 (292)
T 3g07_A 193 NWGDEGLKRMFRRIYR------------------HLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHHHHHHHHH------------------HEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHH------------------HhCCCcEEEEec
Confidence 1133356678888888 999999999963
No 59
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=1.4e-13 Score=110.79 Aligned_cols=103 Identities=17% Similarity=0.250 Sum_probs=80.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
++++.+|||+|||+|.++..+++.++ +.+|+|+|+++.++..+. ...+++++++|+.+.+ +.++||
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~----~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~---------~~~~fD 97 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYG----VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK---------PAQKAD 97 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHC----TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC---------CSSCEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC---------ccCCcC
Confidence 46788999999999999999999874 479999999999976532 1357899999887654 256899
Q ss_pred EEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 116 VILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 116 ~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+|+++.. ..+..+ ...++..+.+ +|||||+|++..+.
T Consensus 98 ~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 98 LLYANAV----FQWVPD-------HLAVLSQLMD------------------QLESGGVLAVQMPD 134 (259)
T ss_dssp EEEEESC----GGGSTT-------HHHHHHHHGG------------------GEEEEEEEEEEEEC
T ss_pred EEEEeCc----hhhCCC-------HHHHHHHHHH------------------hcCCCeEEEEEeCC
Confidence 9999542 222222 4577888888 99999999998864
No 60
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.43 E-value=8.8e-14 Score=123.65 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=85.4
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++.+|||+|||+|++|..+++.+++ .++|+++|+++.++... ....++.++++|+..+... ..+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~---~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~-------~~~ 186 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNN---EGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA-------VPE 186 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTT---CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH-------STT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh-------ccc
Confidence 8999999999999999999999864 58999999999996541 1224688888887654321 246
Q ss_pred CccEEEeCCCCCCCCCcccch-----------HHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 113 GFSVILSDMCPSVSGITTKDA-----------ALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+||.|++|++|+..|....+. .....+....+..+.+ +|||||+|++.+..
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~------------------~LkpGG~LvysTcs 248 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFH------------------ALRPGGTLVYSTCT 248 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHH------------------HEEEEEEEEEEESC
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHH------------------hcCCCCEEEEeccc
Confidence 899999999987766543221 1112334567777777 99999999988653
No 61
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.43 E-value=9.7e-14 Score=113.03 Aligned_cols=119 Identities=9% Similarity=0.177 Sum_probs=80.9
Q ss_pred HHcCCCC-CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhh
Q 038391 32 KQYKLIK-PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQ 103 (186)
Q Consensus 32 ~~~~~~~-~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~ 103 (186)
..+..++ ++.+|||+|||+|.++..+++.. ..+|+|+|+++.++.. .....+++++++|+.+....
T Consensus 41 ~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~-----~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~- 114 (259)
T 3lpm_A 41 AKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT-----KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL- 114 (259)
T ss_dssp HHHCCCCSSCCEEEETTCTTTHHHHHHHTTC-----CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-
T ss_pred HHHhcCCCCCCEEEEcCCchhHHHHHHHHhc-----CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-
Confidence 3444567 88999999999999999999883 2499999999998654 23345799999998765421
Q ss_pred HhhhCCCCCCccEEEeCCCCCCC---CCcccc------hHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcE
Q 038391 104 VRALSPKQKGFSVILSDMCPSVS---GITTKD------AALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGH 174 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~ 174 (186)
+ +.++||+|++|+++... +....+ ..........++..+.+ +|||||+
T Consensus 115 ---~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~------------------~LkpgG~ 171 (259)
T 3lpm_A 115 ---I--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAAS------------------LLKQGGK 171 (259)
T ss_dssp ---S--CTTCEEEEEECCCC-----------------------HHHHHHHHHHHH------------------HEEEEEE
T ss_pred ---h--ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHH------------------HccCCcE
Confidence 1 35799999999764332 111110 00111234567788887 9999999
Q ss_pred EEEEE
Q 038391 175 LVIKL 179 (186)
Q Consensus 175 lvi~~ 179 (186)
|++..
T Consensus 172 l~~~~ 176 (259)
T 3lpm_A 172 ANFVH 176 (259)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99954
No 62
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.43 E-value=3.5e-13 Score=111.05 Aligned_cols=105 Identities=17% Similarity=0.269 Sum_probs=81.6
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+ +.+|+|+|+++.++..+ ....+++++++|+.+++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------- 146 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF-----GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------- 146 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS-------
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh-----CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC-------
Confidence 46788999999999999999999986 36999999999987542 233579999999887653
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
++++||+|++... ..+..+ ...++.++.+ +|||||+|++..+..
T Consensus 147 -~~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 147 -EDNSYDFIWSQDA----FLHSPD-------KLKVFQECAR------------------VLKPRGVMAITDPMK 190 (297)
T ss_dssp -CTTCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEEEE
T ss_pred -CCCCEeEEEecch----hhhcCC-------HHHHHHHHHH------------------HcCCCeEEEEEEecc
Confidence 3578999998532 122222 4577888887 999999999987653
No 63
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.43 E-value=4.6e-13 Score=106.31 Aligned_cols=118 Identities=16% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCCCCCCEEEEEccc-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhC
Q 038391 35 KLIKPGSSVLDLGCA-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
..++++.+|||+||| +|.++..+++.. +.+|+|+|+++.++..+. ...+++++++|+.....-
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~------ 119 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF-----NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGV------ 119 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTT------
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc-----CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhc------
Confidence 346789999999999 999999999985 379999999999975421 112789999987543211
Q ss_pred CCCCCccEEEeCCCCCCCCCcccch--------HHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDA--------ALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+.++||+|++|++........... ....+....++..+.+ +|||||++++.+-
T Consensus 120 -~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~~ 180 (230)
T 3evz_A 120 -VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFD------------------HLNPGGKVALYLP 180 (230)
T ss_dssp -CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGG------------------GEEEEEEEEEEEE
T ss_pred -ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHH------------------HhCCCeEEEEEec
Confidence 347999999987643222110000 0001223678888888 9999999999765
Q ss_pred cC
Q 038391 181 ES 182 (186)
Q Consensus 181 ~~ 182 (186)
++
T Consensus 181 ~~ 182 (230)
T 3evz_A 181 DK 182 (230)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 64
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.43 E-value=5.3e-14 Score=116.10 Aligned_cols=107 Identities=21% Similarity=0.255 Sum_probs=73.0
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh---hhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS---NQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~---~~l~~~~~~~~ 112 (186)
.++++.+|||+|||+|.++..++++ +.+|+|+|+|+.|++.++......+++.++.+... .. ..+
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~------g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~------~~~ 109 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER------GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKE------LAG 109 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGG------GTT
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccc------cCC
Confidence 4678899999999999999999987 57999999999997652211101134555554432 11 146
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+||+|+++.. .+.... +.....+..+.+ +| |||++++++..+
T Consensus 110 ~fD~Vv~~~~-----l~~~~~----~~~~~~l~~l~~------------------lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 110 HFDFVLNDRL-----INRFTT----EEARRACLGMLS------------------LV-GSGTVRASVKLG 151 (261)
T ss_dssp CCSEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HH-TTSEEEEEEEBS
T ss_pred CccEEEEhhh-----hHhCCH----HHHHHHHHHHHH------------------hC-cCcEEEEEeccC
Confidence 8999999642 221111 124456666776 89 999999997655
No 65
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.43 E-value=8.7e-14 Score=111.26 Aligned_cols=106 Identities=26% Similarity=0.337 Sum_probs=77.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++.+++ +++|+|+|+++.++.. +....+++++++|+.+... +. ...+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~---~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~--~~---~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGP---DGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHK--YR---MLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT---TCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGG--GG---GGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhh--hc---ccCC
Confidence 578899999999999999999999753 4799999999875432 2223679999998876321 00 0246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+||+|+++.+ ..+. ...++..+.+ .|||||++++.+..
T Consensus 147 ~~D~V~~~~~-------~~~~------~~~~~~~~~~------------------~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 147 MVDVIFADVA-------QPDQ------TRIVALNAHT------------------FLRNGGHFVISIKA 184 (233)
T ss_dssp CEEEEEECCC-------CTTH------HHHHHHHHHH------------------HEEEEEEEEEEEEH
T ss_pred cEEEEEEcCC-------CccH------HHHHHHHHHH------------------HcCCCeEEEEEEcc
Confidence 8999999763 1111 3345666776 99999999997654
No 66
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.42 E-value=7e-13 Score=115.91 Aligned_cols=116 Identities=22% Similarity=0.273 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.+++.+|||+|||+|+++..+++.++ +++|+|+|+++.++... ....+++++++|+...... + ++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~----~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~----~--~~ 313 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAP----EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW----C--GE 313 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCT----TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH----H--TT
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh----c--cc
Confidence 57889999999999999999999864 37999999999997541 1122478888888765321 1 24
Q ss_pred CCccEEEeCCCCCCCCCcccchHH-----------HHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAAL-----------SVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++||+|++|++|+..|....+... ...+....+..+.+ +|||||+|++.+.
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~------------------~LkpGG~lvystc 375 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP------------------HLKTGGTLVYATC 375 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGG------------------GEEEEEEEEEEES
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHH------------------hcCCCCEEEEEEC
Confidence 689999999998877764333221 12334577777887 9999999999873
No 67
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.42 E-value=9.8e-14 Score=111.37 Aligned_cols=103 Identities=20% Similarity=0.215 Sum_probs=79.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...++++.++|+.+++. +
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------~ 84 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPY------VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF--------P 84 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS--------C
T ss_pred cCCCCEEEEEccCcCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCC--------C
Confidence 578899999999999999999987 369999999999975421 22478999999876542 3
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+++||+|++... ..+..+ ...++..+.+ +|||||++++.....
T Consensus 85 ~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 85 DDSFDIITCRYA----AHHFSD-------VRKAVREVAR------------------VLKQDGRFLLVDHYA 127 (239)
T ss_dssp TTCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEECB
T ss_pred CCcEEEEEECCc----hhhccC-------HHHHHHHHHH------------------HcCCCcEEEEEEcCC
Confidence 579999999542 223333 4567888887 999999999976554
No 68
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.42 E-value=1.7e-13 Score=104.64 Aligned_cols=114 Identities=13% Similarity=0.088 Sum_probs=77.8
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChh
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSN 102 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~ 102 (186)
+......+.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.+ ....+++++++|+.+...
T Consensus 22 ~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 95 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-G----MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID- 95 (177)
T ss_dssp HHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-T----CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH-
T ss_pred HHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH-
Confidence 4444443567889999999999999999987 2 36999999999987541 122468888888765211
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH--cCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLA--LGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
. ..++||+|+++.+. +.. .....+... .+ +|||||++++...
T Consensus 96 ---~---~~~~fD~i~~~~~~-----~~~-------~~~~~~~~l~~~~------------------~L~~gG~l~~~~~ 139 (177)
T 2esr_A 96 ---C---LTGRFDLVFLDPPY-----AKE-------TIVATIEALAAKN------------------LLSEQVMVVCETD 139 (177)
T ss_dssp ---H---BCSCEEEEEECCSS-----HHH-------HHHHHHHHHHHTT------------------CEEEEEEEEEEEE
T ss_pred ---h---hcCCCCEEEECCCC-----Ccc-------hHHHHHHHHHhCC------------------CcCCCcEEEEEEC
Confidence 1 13579999997531 111 122233333 35 9999999999887
Q ss_pred cCCCC
Q 038391 181 ESQDA 185 (186)
Q Consensus 181 ~~~~~ 185 (186)
..+.+
T Consensus 140 ~~~~~ 144 (177)
T 2esr_A 140 KTVLL 144 (177)
T ss_dssp TTCCC
T ss_pred Ccccc
Confidence 76543
No 69
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.42 E-value=2.3e-13 Score=112.06 Aligned_cols=110 Identities=14% Similarity=0.167 Sum_probs=82.6
Q ss_pred HHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHh
Q 038391 31 QKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVR 105 (186)
Q Consensus 31 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~ 105 (186)
...+..++++.+|||+|||+|.++..+++.++. +.+|+|+|+++.++..+ ....+++++++|+.+.+.
T Consensus 14 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~---- 86 (284)
T 3gu3_A 14 VNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPE---GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL---- 86 (284)
T ss_dssp HHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCT---TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC----
T ss_pred HHHHhccCCCCeEEEecCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc----
Confidence 334444678899999999999999999998753 47999999999987541 122379999999876542
Q ss_pred hhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 106 ALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.++||+|++... ..+..+ ...++..+.+ +|||||++++....
T Consensus 87 -----~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 -----NDKYDIAICHAF----LLHMTT-------PETMLQKMIH------------------SVKKGGKIICFEPH 128 (284)
T ss_dssp -----SSCEEEEEEESC----GGGCSS-------HHHHHHHHHH------------------TEEEEEEEEEEECC
T ss_pred -----CCCeeEEEECCh----hhcCCC-------HHHHHHHHHH------------------HcCCCCEEEEEecc
Confidence 358999999652 122222 3477888887 99999999987654
No 70
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.42 E-value=9.7e-14 Score=119.48 Aligned_cols=112 Identities=21% Similarity=0.332 Sum_probs=82.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC--------------CCCeEEEEeeecCCChh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC--------------DARVQTVSADVINLPSN 102 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~--------------~~~~~~~~~d~~~~~~~ 102 (186)
+.++.+|||+|||+|.++..+++.+++ +.+|+|+|+++.++..+.. ..+++++++|+.++...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGE---HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTT---TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCC---CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc
Confidence 457889999999999999999998754 5799999999999765221 15899999998764210
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.....+.++||+|+++.. ..+..+ ...++.++.+ +|||||+|++..+..
T Consensus 158 --~~~~~~~~~fD~V~~~~~----l~~~~d-------~~~~l~~~~r------------------~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 158 --EPEGVPDSSVDIVISNCV----CNLSTN-------KLALFKEIHR------------------VLRDGGELYFSDVYA 206 (383)
T ss_dssp --BSCCCCTTCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEEEE
T ss_pred --ccCCCCCCCEEEEEEccc----hhcCCC-------HHHHHHHHHH------------------HcCCCCEEEEEEecc
Confidence 000114679999999653 222223 4577888888 999999999986544
No 71
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.42 E-value=1.5e-13 Score=113.18 Aligned_cols=119 Identities=23% Similarity=0.262 Sum_probs=80.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|+++..+++.++. .++|+|+|+++.++... ....+++++++|+...... +...
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~---~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~----~~~~ 153 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKN---KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDY----LLKN 153 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTT---CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH----HHHT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCC---CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchh----hhhc
Confidence 578999999999999999999998753 47999999999986541 1223788999987654321 0001
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHH-------HHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALS-------VELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.++||+|++|++|+..|....+.... .......+..+.+ +|||||+|++.+.
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~------------------~LkpgG~lv~stc 212 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGID------------------LLKKDGELVYSTC 212 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHH------------------HEEEEEEEEEEES
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHH------------------hCCCCCEEEEEEC
Confidence 46899999999887666543211000 0123566777777 9999999999764
No 72
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=2.2e-13 Score=111.52 Aligned_cols=108 Identities=27% Similarity=0.311 Sum_probs=79.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++. + ..+|+|+|+++.++..+ ....+++++++|+.+.+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------- 129 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-G----IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD------- 129 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-T----CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-------
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-------
Confidence 478899999999999999998886 2 35999999999997541 1224689999998766431
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|++... .+.. .........++..+.+ +|||||+|++.+..
T Consensus 130 ~~~~fD~v~~~~~-----l~~~--~~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 130 LGKEFDVISSQFS-----FHYA--FSTSESLDIAQRNIAR------------------HLRPGGYFIMTVPS 176 (298)
T ss_dssp CSSCEEEEEEESC-----GGGG--GSSHHHHHHHHHHHHH------------------TEEEEEEEEEEEEC
T ss_pred CCCCcCEEEECch-----hhhh--cCCHHHHHHHHHHHHH------------------hcCCCCEEEEEECC
Confidence 2578999999542 1110 0112335677888887 99999999998765
No 73
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.42 E-value=1.8e-13 Score=112.31 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=78.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.++... .
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-------~ 133 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-------L 133 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-------C
T ss_pred CCCCEEEEeCCcchHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-------c
Confidence 34679999999999999999997 47999999999987542 2226799999998776421 3
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.++||+|++... ..+..+ ...++..+.+ +|||||.+++..+.
T Consensus 134 ~~~fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 134 ETPVDLILFHAV----LEWVAD-------PRSVLQTLWS------------------VLRPGGVLSLMFYN 175 (285)
T ss_dssp SSCEEEEEEESC----GGGCSC-------HHHHHHHHHH------------------TEEEEEEEEEEEEB
T ss_pred CCCceEEEECch----hhcccC-------HHHHHHHHHH------------------HcCCCeEEEEEEeC
Confidence 579999999542 122222 3567888887 99999999998764
No 74
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.41 E-value=4.1e-14 Score=114.15 Aligned_cols=105 Identities=19% Similarity=0.138 Sum_probs=75.6
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++|.+|||||||+|..+..+++.. ..+|+|||+++.+++.+ ....+++++.+|+...... + +.+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-----~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~----~--~~~ 127 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-----IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT----L--PDG 127 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-----EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG----S--CTT
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-----CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccc----c--ccc
Confidence 678999999999999999998763 35899999999997652 2345677888876543211 1 467
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
+||.|+.|........+.. .....++.++.+ +|||||+|++
T Consensus 128 ~FD~i~~D~~~~~~~~~~~------~~~~~~~~e~~r------------------vLkPGG~l~f 168 (236)
T 3orh_A 128 HFDGILYDTYPLSEETWHT------HQFNFIKNHAFR------------------LLKPGGVLTY 168 (236)
T ss_dssp CEEEEEECCCCCBGGGTTT------HHHHHHHHTHHH------------------HEEEEEEEEE
T ss_pred CCceEEEeeeecccchhhh------cchhhhhhhhhh------------------eeCCCCEEEE
Confidence 8999998764222222211 225677888888 9999999976
No 75
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.41 E-value=1.5e-13 Score=108.10 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=76.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC--CCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH--CDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~--~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
+++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+.+. + ++||
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~--------~-~~fD 108 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA------GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEV--------P-TSID 108 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT------TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCC--------C-SCCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC------CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCC--------C-CCeE
Confidence 57889999999999999999997 479999999999876521 11478899998877642 2 7999
Q ss_pred EEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 116 VILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 116 ~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+|++... .+.... .....++..+.+ +|||||.+++...
T Consensus 109 ~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 109 TIVSTYA-----FHHLTD----DEKNVAIAKYSQ------------------LLNKGGKIVFADT 146 (220)
T ss_dssp EEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HSCTTCEEEEEEE
T ss_pred EEEECcc-----hhcCCh----HHHHHHHHHHHH------------------hcCCCCEEEEEec
Confidence 9999542 222221 112347777777 9999999999864
No 76
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.41 E-value=2.1e-13 Score=106.07 Aligned_cols=86 Identities=20% Similarity=0.181 Sum_probs=52.0
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCC-----CCeEEEEeeecCCChhhH
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCD-----ARVQTVSADVINLPSNQV 104 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~-----~~~~~~~~d~~~~~~~~l 104 (186)
+.......+++.+|||+|||+|.++..+++..+ +.+|+|+|+++.++..+... .+++++++|+.+ .....
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~ 95 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP----GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIER 95 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT----TEEEEEEECC-------------------CCHHHHHH-HHHHH
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhh
Confidence 444443336788999999999999999999863 47999999999998763221 156666677654 11100
Q ss_pred hhhCCCCCCccEEEeCCCC
Q 038391 105 RALSPKQKGFSVILSDMCP 123 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~ 123 (186)
. . ..++||+|++|.++
T Consensus 96 ~-~--~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 96 A-E--RGRPWHAIVSNPPY 111 (215)
T ss_dssp H-H--TTCCBSEEEECCCC
T ss_pred h-h--ccCcccEEEECCCC
Confidence 0 0 13799999998764
No 77
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.41 E-value=5e-13 Score=117.59 Aligned_cols=118 Identities=25% Similarity=0.334 Sum_probs=87.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|+++..+++.++. .++|+++|+++.++... ....+++++++|+...... + +
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~---~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~----~--~ 327 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKN---KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI----I--G 327 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTT---CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS----S--C
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCC---CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh----h--c
Confidence 678899999999999999999998753 47999999999986541 1224688888888765421 0 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchH-----------HHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAA-----------LSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+++||+|++|++|+..|....... ....+....+..+.+ +|||||+|++.+
T Consensus 328 ~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~------------------~LkpGG~lvy~t 389 (450)
T 2yxl_A 328 EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAAR------------------LVKPGGRLLYTT 389 (450)
T ss_dssp SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHT------------------TEEEEEEEEEEE
T ss_pred cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHH------------------hcCCCcEEEEEe
Confidence 368999999999887776433221 122233567888887 999999999876
Q ss_pred cc
Q 038391 180 LE 181 (186)
Q Consensus 180 ~~ 181 (186)
..
T Consensus 390 cs 391 (450)
T 2yxl_A 390 CS 391 (450)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 78
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.41 E-value=1e-12 Score=102.69 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=78.6
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++++.+|||+|||+|.++..+++..+ ..+|+|+|+++.+++.+. ...+++++++|+.+...
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-------- 104 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMP----NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-------- 104 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCT----TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT--------
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh--------
Confidence 367889999999999999999999853 489999999999975521 22579999998865432
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
...+||+|+++... . + ...++..+.+ .|||||++++....
T Consensus 105 ~~~~~D~i~~~~~~-----~--~-------~~~~l~~~~~------------------~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 105 DLPDPDRVFIGGSG-----G--M-------LEEIIDAVDR------------------RLKSEGVIVLNAVT 144 (204)
T ss_dssp TSCCCSEEEESCCT-----T--C-------HHHHHHHHHH------------------HCCTTCEEEEEECB
T ss_pred cCCCCCEEEECCCC-----c--C-------HHHHHHHHHH------------------hcCCCeEEEEEecc
Confidence 12579999996532 1 1 4467888887 99999999998654
No 79
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.40 E-value=1.1e-12 Score=107.53 Aligned_cols=105 Identities=20% Similarity=0.232 Sum_probs=78.1
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.. +.+|+|+|+++.++..+ ....+++++++|+.++
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------- 126 (287)
T 1kpg_A 61 GLQPGMTLLDVGCGWGATMMRAVEKY-----DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF--------- 126 (287)
T ss_dssp TCCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---------
T ss_pred CCCCcCEEEEECCcccHHHHHHHHHc-----CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---------
Confidence 35788999999999999999999776 36999999999986542 2335789999987543
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+ ++||+|++... .+.... ......+..+.+ +|||||++++..+...
T Consensus 127 -~-~~fD~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 127 -D-EPVDRIVSIGA-----FEHFGH----ERYDAFFSLAHR------------------LLPADGVMLLHTITGL 172 (287)
T ss_dssp -C-CCCSEEEEESC-----GGGTCT----TTHHHHHHHHHH------------------HSCTTCEEEEEEEEEC
T ss_pred -C-CCeeEEEEeCc-----hhhcCh----HHHHHHHHHHHH------------------hcCCCCEEEEEEecCC
Confidence 2 68999998532 111100 114567788887 9999999999887643
No 80
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=2.2e-13 Score=106.19 Aligned_cols=115 Identities=20% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++.. ..+|+|+|+++.++..+ ....+++++++|+.+++. +.+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~-----~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~--------~~~ 106 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGG-----FPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDF--------PSA 106 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTT-----CCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCS--------CSS
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcC-----CCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCC--------CCC
Confidence 4778899999999999999999872 23899999999987542 123578999999876542 357
Q ss_pred CccEEEeCCCC-----CCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 113 GFSVILSDMCP-----SVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 113 ~~D~V~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+||+|+++... .....|... .........++..+.+ +|||||++++..+..+
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~------------------~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVS-SEGVHTVDQVLSEVSR------------------VLVPGGRFISMTSAAP 163 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCC-HHHHHHHHHHHHHHHH------------------HEEEEEEEEEEESCCH
T ss_pred cccEEEECcchhhhccccccccccc-cchhHHHHHHHHHHHH------------------hCcCCCEEEEEeCCCc
Confidence 89999985421 001111111 1223345678888887 9999999999987653
No 81
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=4.8e-14 Score=116.72 Aligned_cols=104 Identities=18% Similarity=0.243 Sum_probs=77.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CC----CCeEEEEeeecCCChhhHhhhCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CD----ARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~----~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. .. .+++++++|+.+++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 147 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-------- 147 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--------
T ss_pred CCCcEEEEeccCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--------
Confidence 3459999999999999999987 479999999999976521 11 579999999987642
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
.++||+|++.. ...+..+ .+....++..+.+ +|||||+|++.++..+
T Consensus 148 -~~~fD~v~~~~----~~~~~~~----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 -DKRFGTVVISS----GSINELD----EADRRGLYASVRE------------------HLEPGGKFLLSLAMSE 194 (299)
T ss_dssp -SCCEEEEEECH----HHHTTSC----HHHHHHHHHHHHH------------------HEEEEEEEEEEEECCH
T ss_pred -CCCcCEEEECC----cccccCC----HHHHHHHHHHHHH------------------HcCCCcEEEEEeecCc
Confidence 46899998631 1112222 1234577788887 9999999999987653
No 82
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.40 E-value=1.8e-13 Score=108.03 Aligned_cols=106 Identities=20% Similarity=0.313 Sum_probs=78.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------C----CCCCeEEEEeeecCCChhhHh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------H----CDARVQTVSADVINLPSNQVR 105 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~----~~~~~~~~~~d~~~~~~~~l~ 105 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ . ...+++++.+|+...+.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---- 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF---- 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS----
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC----
Confidence 468899999999999999999997 47999999999886431 1 12357888898876542
Q ss_pred hhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 106 ALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+.++||+|++... ..+..+. .....++..+.+ +|||||+|++..+..
T Consensus 98 ----~~~~~D~v~~~~~----l~~~~~~----~~~~~~l~~~~~------------------~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 98 ----HDSSFDFAVMQAF----LTSVPDP----KERSRIIKEVFR------------------VLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ----CTTCEEEEEEESC----GGGCCCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEEBC
T ss_pred ----CCCceeEEEEcch----hhcCCCH----HHHHHHHHHHHH------------------HcCCCeEEEEEECCc
Confidence 3578999999532 1222222 223467777777 999999999987654
No 83
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.39 E-value=6e-13 Score=105.86 Aligned_cols=103 Identities=25% Similarity=0.352 Sum_probs=76.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc---CCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL---HCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~---~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
..++.+|||+|||+|.++..+++. + ..+|+|+|+++.++..+ ....+++++++|+...+. +.++
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~-~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~--------~~~~ 107 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEH-G----ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHL--------PQDS 107 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCC--------CTTC
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHC-C----CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccC--------CCCC
Confidence 457889999999999999999987 1 23999999999987542 122468899998876542 3578
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
||+|++... ..+..+ ...++..+.+ +|||||++++...+
T Consensus 108 fD~v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 108 FDLAYSSLA----LHYVED-------VARLFRTVHQ------------------ALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEEC
T ss_pred ceEEEEecc----ccccch-------HHHHHHHHHH------------------hcCcCcEEEEEeCC
Confidence 999999542 112222 4467777777 99999999998753
No 84
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.39 E-value=1.3e-13 Score=107.21 Aligned_cols=104 Identities=18% Similarity=0.244 Sum_probs=78.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-----CCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC-----DARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~-----~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
++++ +|||+|||+|.++..+++. +.+|+|+|+++.++..+.. ..++++.++|+.+.+. +.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--------~~ 92 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDI--------VA 92 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSC--------CT
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCC--------Cc
Confidence 4677 9999999999999999886 4799999999999765211 2278888888876542 35
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCC
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQD 184 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~ 184 (186)
++||+|++.. .+.. ......++..+.+ +|||||.+++..+..+.
T Consensus 93 ~~fD~v~~~~------~~~~-----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 93 DAWEGIVSIF------CHLP-----SSLRQQLYPKVYQ------------------GLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp TTCSEEEEEC------CCCC-----HHHHHHHHHHHHT------------------TCCSSEEEEEEEECTTT
T ss_pred CCccEEEEEh------hcCC-----HHHHHHHHHHHHH------------------hcCCCcEEEEEEecccc
Confidence 7899999842 1111 1235677888888 99999999999876543
No 85
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.39 E-value=2.5e-13 Score=107.04 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=75.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-------CC----CCeEEEEeeecCCChhhHhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-------CD----ARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-------~~----~~~~~~~~d~~~~~~~~l~~ 106 (186)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.++..+. .. .+++++++|+......
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---- 99 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF----FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR---- 99 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT----CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG----
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC----CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc----
Confidence 4678999999999999999999743 369999999999975421 11 2799999998654432
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.++||+|++... .+... ......++..+.+ +|||||.+++...
T Consensus 100 ----~~~fD~v~~~~~-----l~~~~----~~~~~~~l~~~~~------------------~LkpgG~li~~~~ 142 (217)
T 3jwh_A 100 ----FHGYDAATVIEV-----IEHLD----LSRLGAFERVLFE------------------FAQPKIVIVTTPN 142 (217)
T ss_dssp ----GCSCSEEEEESC-----GGGCC----HHHHHHHHHHHHT------------------TTCCSEEEEEEEB
T ss_pred ----CCCcCEEeeHHH-----HHcCC----HHHHHHHHHHHHH------------------HcCCCEEEEEccC
Confidence 468999998532 22222 1224577888888 9999998776643
No 86
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.39 E-value=9e-13 Score=107.80 Aligned_cols=124 Identities=19% Similarity=0.143 Sum_probs=79.9
Q ss_pred HcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----------cCCCCCeEEEEeeecCCChh
Q 038391 33 QYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----------LHCDARVQTVSADVINLPSN 102 (186)
Q Consensus 33 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----------~~~~~~~~~~~~d~~~~~~~ 102 (186)
.+...+++.+|||+|||+|.++..++++.+ +.+|+|+|+++.++.. .....+++++++|+.+....
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~----~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLE----KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA 105 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCT----TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh
Confidence 344456788999999999999999999864 4799999999988543 11223699999998876321
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCC-CcccchHHH------HHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEE
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSG-ITTKDAALS------VELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHL 175 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~l 175 (186)
.+... .+.++||+|++|++..... ....+.... ......++..+.+ +|||||+|
T Consensus 106 ~~~~~-~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~------------------~LkpgG~l 166 (260)
T 2ozv_A 106 RVEAG-LPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASA------------------IMVSGGQL 166 (260)
T ss_dssp HHHTT-CCTTCEEEEEECCCC---------------------CCHHHHHHHHHH------------------HEEEEEEE
T ss_pred hhhhc-cCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHH------------------HcCCCCEE
Confidence 11000 1356899999997643321 110000000 0114567777777 99999999
Q ss_pred EEEE
Q 038391 176 VIKL 179 (186)
Q Consensus 176 vi~~ 179 (186)
++.+
T Consensus 167 ~~~~ 170 (260)
T 2ozv_A 167 SLIS 170 (260)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9865
No 87
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.39 E-value=1.1e-12 Score=105.15 Aligned_cols=104 Identities=13% Similarity=0.020 Sum_probs=77.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----CCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----CDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
.+++.+|||+|||+|.++..+++.. ..+|+|+|+++.++..+. ...+++++++|+..++. +.+
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~--------~~~ 157 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-----YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATL--------PPN 157 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-----CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCC--------CSS
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-----cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCC--------CCC
Confidence 4578899999999999999999884 268999999999975521 11578899998876542 357
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+||+|++... .+.... .....++..+.+ +|||||+|++...
T Consensus 158 ~fD~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 158 TYDLIVIQWT-----AIYLTD----ADFVKFFKHCQQ------------------ALTPNGYIFFKEN 198 (254)
T ss_dssp CEEEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred CeEEEEEcch-----hhhCCH----HHHHHHHHHHHH------------------hcCCCeEEEEEec
Confidence 8999999432 222211 225577777887 9999999999875
No 88
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.39 E-value=3.7e-13 Score=109.20 Aligned_cols=104 Identities=18% Similarity=0.242 Sum_probs=76.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|..+..+++.+++ +++|+++|+++.++..+ ....+++++++|+.+......... .
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~--~ 133 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPD---DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEG--G 133 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCT---TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHH--C
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhcc--C
Confidence 45789999999999999999998764 58999999999998762 234589999998765322111000 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.++||+|++|.. ... ....++.+.+ +|||||+|++.
T Consensus 134 ~~~fD~V~~d~~--------~~~------~~~~l~~~~~------------------~LkpGG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDAD--------KTN------YLNYYELALK------------------LVTPKGLIAID 169 (242)
T ss_dssp SSCEEEEEEESC--------GGG------HHHHHHHHHH------------------HEEEEEEEEEE
T ss_pred CCCEeEEEEcCC--------hHH------hHHHHHHHHH------------------hcCCCeEEEEE
Confidence 368999999752 111 3346677777 99999999984
No 89
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.39 E-value=8.9e-13 Score=102.04 Aligned_cols=107 Identities=15% Similarity=0.062 Sum_probs=74.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.++ ...+++++++|+.+.... + +.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~--~~ 111 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-----GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA----G--TT 111 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-----TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH----C--CS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-----CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh----c--cC
Confidence 46889999999999999988875 2468999999999975421 125799999998654221 1 25
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH--cCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLA--LGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
++||+|++|.+.. +.. ......+..+ .+ +|||||.+++.....+
T Consensus 112 ~~fD~i~~~~p~~----~~~------~~~~~~l~~~~~~~------------------~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 112 SPVDLVLADPPYN----VDS------ADVDAILAALGTNG------------------WTREGTVAVVERATTC 157 (189)
T ss_dssp SCCSEEEECCCTT----SCH------HHHHHHHHHHHHSS------------------SCCTTCEEEEEEETTS
T ss_pred CCccEEEECCCCC----cch------hhHHHHHHHHHhcC------------------ccCCCeEEEEEecCCC
Confidence 7999999986521 110 1122333333 33 8999999999876543
No 90
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.38 E-value=5.1e-13 Score=106.16 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=75.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+.+. .+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---------~~ 100 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI---------NR 100 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC---------SC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCc---------cC
Confidence 36789999999999999999987 479999999999975521 11268888888876542 26
Q ss_pred CccEEEeCC-CCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 113 GFSVILSDM-CPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 113 ~~D~V~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+||+|++.. . ..+..+ ......++..+.+ +|||||.+++.+.+
T Consensus 101 ~fD~v~~~~~~----l~~~~~----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 101 KFDLITCCLDS----TNYIID----SDDLKKYFKAVSN------------------HLKEGGVFIFDINS 144 (246)
T ss_dssp CEEEEEECTTG----GGGCCS----HHHHHHHHHHHHT------------------TEEEEEEEEEEEEC
T ss_pred CceEEEEcCcc----ccccCC----HHHHHHHHHHHHH------------------hcCCCcEEEEEecC
Confidence 899999843 1 112211 1235677888888 99999999997653
No 91
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.38 E-value=2.1e-13 Score=106.38 Aligned_cols=108 Identities=23% Similarity=0.266 Sum_probs=77.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.+++.+|||+|||+|.++..++... +.+|+|+|+++.++..+. ...+++++++|+.+.+. +.
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--------~~ 87 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED-----GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPF--------KD 87 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT-----TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCS--------CT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCC--------CC
Confidence 4678899999999999855554442 579999999999976521 22468889998876542 35
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCC
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQD 184 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~ 184 (186)
++||+|++... .+... ......++..+.+ +|||||.+++..+..++
T Consensus 88 ~~fD~v~~~~~-----l~~~~----~~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 88 ESMSFVYSYGT-----IFHMR----KNDVKEAIDEIKR------------------VLKPGGLACINFLTTKD 133 (209)
T ss_dssp TCEEEEEECSC-----GGGSC----HHHHHHHHHHHHH------------------HEEEEEEEEEEEEETTS
T ss_pred CceeEEEEcCh-----HHhCC----HHHHHHHHHHHHH------------------HcCCCcEEEEEEecccc
Confidence 78999998432 11111 1235577777887 99999999999886543
No 92
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=6.3e-13 Score=105.56 Aligned_cols=104 Identities=27% Similarity=0.316 Sum_probs=76.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++.+++ .++|+|+|+++.++.. .....+++++++|+.+.... .. ..+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~---~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGW---EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY--RA---LVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG--TT---TCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCC---CeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh--hc---ccC
Confidence 567899999999999999999998754 4799999999977543 22236899999998753210 00 135
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+||+|+++.+ ..+ .....+..+.+ +|||||++++..
T Consensus 143 ~~D~v~~~~~-------~~~------~~~~~l~~~~~------------------~LkpgG~l~~~~ 178 (227)
T 1g8a_A 143 KVDVIFEDVA-------QPT------QAKILIDNAEV------------------YLKRGGYGMIAV 178 (227)
T ss_dssp CEEEEEECCC-------STT------HHHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred CceEEEECCC-------CHh------HHHHHHHHHHH------------------hcCCCCEEEEEE
Confidence 8999999763 111 12344777777 999999999983
No 93
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.38 E-value=1.6e-12 Score=110.53 Aligned_cols=122 Identities=23% Similarity=0.235 Sum_probs=88.0
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCC
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINL 99 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~ 99 (186)
+..........+++.+|||+|||+|.++..++...++ ..+|+|+|+++.++..+ ... ++++.++|+.++
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~---~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGP---TSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCT---TSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCC---CceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 3333334444678899999999999999999998632 48999999999997541 222 799999998876
Q ss_pred ChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 100 PSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 100 ~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+.. ...||+|++|+++. ....+......+...++..+.+ +|||||++++.+
T Consensus 267 ~~~--------~~~~D~Ii~npPyg---~r~~~~~~~~~~~~~~~~~~~~------------------~LkpgG~l~i~t 317 (354)
T 3tma_A 267 PRF--------FPEVDRILANPPHG---LRLGRKEGLFHLYWDFLRGALA------------------LLPPGGRVALLT 317 (354)
T ss_dssp GGT--------CCCCSEEEECCCSC---C----CHHHHHHHHHHHHHHHH------------------TSCTTCEEEEEE
T ss_pred ccc--------cCCCCEEEECCCCc---CccCCcccHHHHHHHHHHHHHH------------------hcCCCcEEEEEe
Confidence 432 35689999998632 2222223334455678888887 999999999987
Q ss_pred cc
Q 038391 180 LE 181 (186)
Q Consensus 180 ~~ 181 (186)
.+
T Consensus 318 ~~ 319 (354)
T 3tma_A 318 LR 319 (354)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 94
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.38 E-value=3.9e-13 Score=106.74 Aligned_cols=107 Identities=16% Similarity=0.176 Sum_probs=74.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC-
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP- 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~- 109 (186)
.++.+|||+|||+|..+..+++.+++ +++|+++|+++.++..+ ....+++++++|+.+... .+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~----~~~~~ 129 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQP---GARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP----QLKKK 129 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCT---TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG----GTTTT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCC---CCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH----HHHHh
Confidence 46789999999999999999998754 58999999999986542 233569999998754211 1110
Q ss_pred -CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 -KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 -~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..++||+|+++.. .+.. ......+... + +|||||+|++....
T Consensus 130 ~~~~~fD~V~~d~~-----~~~~------~~~~~~~~~~-~------------------~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 130 YDVDTLDMVFLDHW-----KDRY------LPDTLLLEKC-G------------------LLRKGTVLLADNVI 172 (221)
T ss_dssp SCCCCCSEEEECSC-----GGGH------HHHHHHHHHT-T------------------CCCTTCEEEESCCC
T ss_pred cCCCceEEEEEcCC-----cccc------hHHHHHHHhc-c------------------ccCCCeEEEEeCCC
Confidence 1268999999752 1111 1122344444 6 99999999986543
No 95
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=3.5e-13 Score=110.35 Aligned_cols=102 Identities=25% Similarity=0.345 Sum_probs=78.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.|+..+. ...++++..+|+.+++. .++||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~---------~~~fD 119 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQS------GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV---------DKPLD 119 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC---------SSCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc---------CCCcC
Confidence 467889999999999999999983 589999999999976522 12578899998876542 46899
Q ss_pred EEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 116 VILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 116 ~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+|++... ..+..+ ...++.++.+ +|||||++++..+..
T Consensus 120 ~v~~~~~----l~~~~d-------~~~~l~~~~~------------------~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 120 AVFSNAM----LHWVKE-------PEAAIASIHQ------------------ALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEEEESC----GGGCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEECT
T ss_pred EEEEcch----hhhCcC-------HHHHHHHHHH------------------hcCCCcEEEEEecCC
Confidence 9999542 222233 4467788887 999999999987654
No 96
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.38 E-value=2.3e-12 Score=107.27 Aligned_cols=105 Identities=17% Similarity=0.238 Sum_probs=78.8
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+ +.+|+|+|+++.++..+ ....+++++++|+.++
T Consensus 87 ~~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------- 152 (318)
T 2fk8_A 87 DLKPGMTLLDIGCGWGTTMRRAVERF-----DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--------- 152 (318)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC---------
T ss_pred CCCCcCEEEEEcccchHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC---------
Confidence 35788999999999999999999986 36999999999997542 2235689999987654
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
.++||+|++... .+.... .....++..+.+ +|||||++++..+...
T Consensus 153 --~~~fD~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 153 --AEPVDRIVSIEA-----FEHFGH----ENYDDFFKRCFN------------------IMPADGRMTVQSSVSY 198 (318)
T ss_dssp --CCCCSEEEEESC-----GGGTCG----GGHHHHHHHHHH------------------HSCTTCEEEEEEEECC
T ss_pred --CCCcCEEEEeCh-----HHhcCH----HHHHHHHHHHHH------------------hcCCCcEEEEEEeccC
Confidence 258999998532 211100 114567778887 9999999999887654
No 97
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.38 E-value=6.3e-13 Score=101.71 Aligned_cols=117 Identities=13% Similarity=0.093 Sum_probs=78.2
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChh
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSN 102 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~ 102 (186)
+........++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.+ ....+++++++|+.+...
T Consensus 35 ~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 108 (187)
T 2fhp_A 35 IFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-G----MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE- 108 (187)
T ss_dssp HHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH-
T ss_pred HHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH-
Confidence 3344433457889999999999999998885 1 46999999999997542 123478999998865321
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH--cCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLA--LGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.+....++||+|+++.+. +... ....+... .+ +|||||++++.+-
T Consensus 109 ---~~~~~~~~fD~i~~~~~~-----~~~~-------~~~~~~~l~~~~------------------~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 109 ---QFYEEKLQFDLVLLDPPY-----AKQE-------IVSQLEKMLERQ------------------LLTNEAVIVCETD 155 (187)
T ss_dssp ---HHHHTTCCEEEEEECCCG-----GGCC-------HHHHHHHHHHTT------------------CEEEEEEEEEEEE
T ss_pred ---HHHhcCCCCCEEEECCCC-----Cchh-------HHHHHHHHHHhc------------------ccCCCCEEEEEeC
Confidence 111124689999997641 1111 11222222 55 9999999999877
Q ss_pred cCCCC
Q 038391 181 ESQDA 185 (186)
Q Consensus 181 ~~~~~ 185 (186)
..+.+
T Consensus 156 ~~~~~ 160 (187)
T 2fhp_A 156 KTVKL 160 (187)
T ss_dssp TTCCC
T ss_pred Ccccc
Confidence 66543
No 98
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.37 E-value=3.5e-12 Score=103.04 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=73.8
Q ss_pred CCCEEEEEcccCChHHHHHHHH---hCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQS---LGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~---~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
++.+|||+|||+|..+..+++. +.+ +++|+|||+++.++..+. ...+++++++|+.+... +... ...+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~---~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~--l~~~--~~~~f 153 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGI---DCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTT--FEHL--REMAH 153 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTC---CCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGG--GGGG--SSSCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCC---CCEEEEEeCChHHHHHHhccCCceEEEECcchhHHH--HHhh--ccCCC
Confidence 4679999999999999999987 333 589999999999987643 24689999999876410 1001 23479
Q ss_pred cEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHc-CCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 115 SVILSDMCPSVSGITTKDAALSVELGMRAVDLAL-GPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 115 D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
|+|+++.. +. + ....+..+. . +|||||+|++..
T Consensus 154 D~I~~d~~------~~-~-------~~~~l~~~~r~------------------~LkpGG~lv~~d 187 (236)
T 2bm8_A 154 PLIFIDNA------HA-N-------TFNIMKWAVDH------------------LLEEGDYFIIED 187 (236)
T ss_dssp SEEEEESS------CS-S-------HHHHHHHHHHH------------------TCCTTCEEEECS
T ss_pred CEEEECCc------hH-h-------HHHHHHHHHHh------------------hCCCCCEEEEEe
Confidence 99999763 11 1 234555544 4 799999999954
No 99
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=6.8e-13 Score=101.55 Aligned_cols=107 Identities=19% Similarity=0.188 Sum_probs=78.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+.+. +.++||
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~--------~~~~~D 109 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ------GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQI--------SETDFD 109 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCC--------CCCCEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC------CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCC--------CCCcee
Confidence 568899999999999999999987 479999999998876522 22458888898876532 357899
Q ss_pred EEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 116 VILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 116 ~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+|+++.. ..+... .......+..+.+ +|||||.+++......
T Consensus 110 ~i~~~~~----~~~~~~----~~~~~~~l~~~~~------------------~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 110 LIVSAGN----VMGFLA----EDGREPALANIHR------------------ALGADGRAVIGFGAGR 151 (195)
T ss_dssp EEEECCC----CGGGSC----HHHHHHHHHHHHH------------------HEEEEEEEEEEEETTS
T ss_pred EEEECCc----HHhhcC----hHHHHHHHHHHHH------------------HhCCCCEEEEEeCCCC
Confidence 9999531 112111 1224567777777 9999999999876554
No 100
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.37 E-value=4.5e-13 Score=107.40 Aligned_cols=111 Identities=19% Similarity=0.233 Sum_probs=78.6
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCC-CCeEEEEeeecC
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCD-ARVQTVSADVIN 98 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~-~~~~~~~~d~~~ 98 (186)
++..+......+++.+|||+|||+|..+..+++.+++ +++|+++|+++.++.. .... .+++++++|+.+
T Consensus 44 ~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 44 LLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLAD---NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCT---TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 3443333332344559999999999999999998764 6899999999998654 2233 579999998765
Q ss_pred CChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 99 LPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 99 ~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.... + +.++||+|+++... .+ ....+..+.+ +|||||+|++.
T Consensus 121 ~l~~----~--~~~~fD~V~~d~~~-------~~-------~~~~l~~~~~------------------~LkpGG~lv~d 162 (221)
T 3dr5_A 121 VMSR----L--ANDSYQLVFGQVSP-------MD-------LKALVDAAWP------------------LLRRGGALVLA 162 (221)
T ss_dssp HGGG----S--CTTCEEEEEECCCT-------TT-------HHHHHHHHHH------------------HEEEEEEEEET
T ss_pred HHHH----h--cCCCcCeEEEcCcH-------HH-------HHHHHHHHHH------------------HcCCCcEEEEe
Confidence 3211 1 25789999997531 11 2346777777 99999999984
No 101
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.37 E-value=3e-12 Score=107.90 Aligned_cols=116 Identities=22% Similarity=0.224 Sum_probs=79.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
+++|.+|||+|||+|+++..+++.+++ .++|+++|+++.++.. .....+++++++|+.+..... . .
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~---~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~-~----~ 171 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKN---QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSD-P----R 171 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTC-G----G
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccc-c----c
Confidence 578999999999999999999998864 5899999999998654 112247899999987654210 0 0
Q ss_pred CCCccEEEeCCCCCCCCCcccchH-------------HHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAA-------------LSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
..+||.|++|++|+..|....... ....+....+..+.+ +|+ ||+||.
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~------------------~l~-gG~lvY 232 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALT------------------FPS-LQRLVY 232 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTT------------------CTT-CCEEEE
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHh------------------ccC-CCEEEE
Confidence 147999999999988776543211 112233456666666 777 999997
Q ss_pred EE
Q 038391 178 KL 179 (186)
Q Consensus 178 ~~ 179 (186)
.+
T Consensus 233 sT 234 (309)
T 2b9e_A 233 ST 234 (309)
T ss_dssp EE
T ss_pred EC
Confidence 65
No 102
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.37 E-value=4.9e-12 Score=110.13 Aligned_cols=106 Identities=18% Similarity=0.252 Sum_probs=78.2
Q ss_pred CCCCEEEEEccc------CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCA------PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG------~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++.+||||||| +|+.+..+++.+.+ +++|+|+|+++.|.. ...+++++++|+.+++.. ..+....
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP---~a~V~GVDiSp~m~~---~~~rI~fv~GDa~dlpf~--~~l~~~d 286 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP---RGQIYGLDIMDKSHV---DELRIRTIQGDQNDAEFL--DRIARRY 286 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCT---TCEEEEEESSCCGGG---CBTTEEEEECCTTCHHHH--HHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCC---CCEEEEEECCHHHhh---cCCCcEEEEecccccchh--hhhhccc
Confidence 457899999999 78888888876543 589999999999843 346899999999875432 1110013
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++||+|++++. +... ....++.++.+ +|||||+|+|..++
T Consensus 287 ~sFDlVisdgs------H~~~------d~~~aL~el~r------------------vLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDGS------HINA------HVRTSFAALFP------------------HVRPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECSC------CCHH------HHHHHHHHHGG------------------GEEEEEEEEEECGG
T ss_pred CCccEEEECCc------ccch------hHHHHHHHHHH------------------hcCCCeEEEEEecc
Confidence 68999999652 2221 24578888888 99999999998766
No 103
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.37 E-value=9.1e-13 Score=100.07 Aligned_cols=100 Identities=18% Similarity=0.177 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++.++ +.+|+|+|+++.+++.+ ....++ ++++|.... .+.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~-~~~------ 90 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTP----QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA-FDD------ 90 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSS----SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG-GGG------
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCC----CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh-hhc------
Confidence 57888999999999999999999864 58999999999986541 222367 777776431 110
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..++||+|+++... +. ...+..+.+ .|||||++++..+.
T Consensus 91 ~~~~~D~i~~~~~~-----~~----------~~~l~~~~~------------------~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 91 VPDNPDVIFIGGGL-----TA----------PGVFAAAWK------------------RLPVGGRLVANAVT 129 (178)
T ss_dssp CCSCCSEEEECC-T-----TC----------TTHHHHHHH------------------TCCTTCEEEEEECS
T ss_pred cCCCCCEEEECCcc-----cH----------HHHHHHHHH------------------hcCCCCEEEEEeec
Confidence 12789999996531 11 246677777 99999999998764
No 104
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.37 E-value=4e-13 Score=105.88 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=74.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-------CC----CCeEEEEeeecCCChhhHhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-------CD----ARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-------~~----~~~~~~~~d~~~~~~~~l~~ 106 (186)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.++..+. .. .+++++++|+......
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---- 99 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS----FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR---- 99 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT----CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG----
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc----
Confidence 4678999999999999999998743 379999999999976521 11 1799999998655432
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.++||+|++... .+... ......++..+.+ +|||||.+++..
T Consensus 100 ----~~~fD~V~~~~~-----l~~~~----~~~~~~~l~~~~~------------------~LkpgG~~i~~~ 141 (219)
T 3jwg_A 100 ----FSGYDAATVIEV-----IEHLD----ENRLQAFEKVLFE------------------FTRPQTVIVSTP 141 (219)
T ss_dssp ----GTTCSEEEEESC-----GGGCC----HHHHHHHHHHHHT------------------TTCCSEEEEEEE
T ss_pred ----cCCCCEEEEHHH-----HHhCC----HHHHHHHHHHHHH------------------hhCCCEEEEEcc
Confidence 468999998532 22222 1124577888888 999999766554
No 105
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.37 E-value=5.9e-13 Score=106.77 Aligned_cols=98 Identities=15% Similarity=0.218 Sum_probs=74.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|.++..+++..+ +++|+++|+++.++.. .....+++++++|+.+..... .
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~ 139 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD----DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV------N 139 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT----TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH------T
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh------c
Confidence 4678999999999999999998543 5899999999998654 223358999999987653201 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
.++||+|+++... .. ....+..+.+ +|||||+|++
T Consensus 140 ~~~fD~V~~~~~~--------~~------~~~~l~~~~~------------------~LkpgG~lv~ 174 (232)
T 3ntv_A 140 DKVYDMIFIDAAK--------AQ------SKKFFEIYTP------------------LLKHQGLVIT 174 (232)
T ss_dssp TSCEEEEEEETTS--------SS------HHHHHHHHGG------------------GEEEEEEEEE
T ss_pred cCCccEEEEcCcH--------HH------HHHHHHHHHH------------------hcCCCeEEEE
Confidence 4789999997531 11 3457777887 9999999988
No 106
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.36 E-value=1.6e-12 Score=102.54 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=75.6
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+ ....+++++++|+.+...
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~------- 118 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA------- 118 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-------
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-------
Confidence 3678899999999999999999997 47999999999997542 122379999998865211
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
...+||+|+++.. . + .. ++..+.+ .|||||++++.....
T Consensus 119 -~~~~~D~v~~~~~-----~---~-------~~-~l~~~~~------------------~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 119 -DLPLPEAVFIGGG-----G---S-------QA-LYDRLWE------------------WLAPGTRIVANAVTL 157 (204)
T ss_dssp -TSCCCSEEEECSC-----C---C-------HH-HHHHHHH------------------HSCTTCEEEEEECSH
T ss_pred -cCCCCCEEEECCc-----c---c-------HH-HHHHHHH------------------hcCCCcEEEEEecCc
Confidence 1247999998542 1 2 33 6777777 999999999987653
No 107
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.36 E-value=1.7e-12 Score=101.56 Aligned_cols=97 Identities=21% Similarity=0.164 Sum_probs=73.6
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+....
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------- 140 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHL------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA------- 140 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-------
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-------
Confidence 4678999999999999999999998 47999999999987542 1224799999998765432
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.++||+|+++... .+..+ .+.+ .|||||+|++.+-.
T Consensus 141 -~~~~D~i~~~~~~----~~~~~-------------~~~~------------------~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 -RAPFDAIIVTAAP----PEIPT-------------ALMT------------------QLDEGGILVLPVGE 176 (210)
T ss_dssp -GCCEEEEEESSBC----SSCCT-------------HHHH------------------TEEEEEEEEEEECS
T ss_pred -CCCccEEEEccch----hhhhH-------------HHHH------------------hcccCcEEEEEEcC
Confidence 4689999997532 12221 2344 89999999998765
No 108
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=6.7e-13 Score=104.56 Aligned_cols=104 Identities=21% Similarity=0.276 Sum_probs=76.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+.+. +.
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--------~~ 101 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDY------GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF--------ED 101 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS--------CT
T ss_pred cCCCCeEEEEeccCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCC--------CC
Confidence 456889999999999999999987 359999999999875421 12678999999876542 35
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++||+|+++... ..+.. .....++..+.+ +|||||.+++....
T Consensus 102 ~~~D~v~~~~~~---~~~~~------~~~~~~l~~~~~------------------~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSI---VHFEP------LELNQVFKEVRR------------------VLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCG---GGCCH------HHHHHHHHHHHH------------------HEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCch---HhCCH------HHHHHHHHHHHH------------------HcCCCcEEEEEecC
Confidence 689999995420 01111 124567777777 99999999998654
No 109
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=9.4e-13 Score=105.44 Aligned_cols=114 Identities=17% Similarity=0.129 Sum_probs=80.8
Q ss_pred cCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc---CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 34 YKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL---HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~---~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
...++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+..... .+. .
T Consensus 51 ~~~~~~~~~vLD~GcG~G~~~~~la~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~--~~~-~ 121 (245)
T 3ggd_A 51 ELLFNPELPLIDFACGNGTQTKFLSQF------FPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAA--QIH-S 121 (245)
T ss_dssp TTTSCTTSCEEEETCTTSHHHHHHHHH------SSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHH--HHH-H
T ss_pred hhccCCCCeEEEEcCCCCHHHHHHHHh------CCCEEEEECCHHHHHHHHHhCcccCceEEECccccccccc--ccc-c
Confidence 334678899999999999999999998 35899999999997652 23347999999987754321 110 0
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
...||+|+++.. .+.... +....++..+.+ +|||||+|+|..+..+
T Consensus 122 ~~~~d~v~~~~~-----~~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 122 EIGDANIYMRTG-----FHHIPV----EKRELLGQSLRI------------------LLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHCSCEEEEESS-----STTSCG----GGHHHHHHHHHH------------------HHTTTCEEEEEEECTT
T ss_pred ccCccEEEEcch-----hhcCCH----HHHHHHHHHHHH------------------HcCCCCEEEEEeCCcc
Confidence 235999999653 222221 114567777777 9999999998877543
No 110
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.36 E-value=6.2e-13 Score=104.95 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=77.6
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+++.+|||+|||+|.++..+++..+ +.+|+|+|+++.++..+ ....+++++++|+.++... + +.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~--~~ 109 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP----DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY----F--ED 109 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT----S--CT
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC----CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh----c--CC
Confidence 4678999999999999999999864 47999999999997542 1125799999998764310 1 35
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
++||+|+++.+.+... ..+....-....++..+.+ +|||||.+++.+
T Consensus 110 ~~~D~i~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~ 156 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPK---KRHEKRRLTYKTFLDTFKR------------------ILPENGEIHFKT 156 (214)
T ss_dssp TCCSEEEEESCCCCCS---GGGGGGSTTSHHHHHHHHH------------------HSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCccc---cchhhhccCCHHHHHHHHH------------------HcCCCcEEEEEe
Confidence 6899999986421110 0000000012457777777 999999999976
No 111
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.35 E-value=1.9e-12 Score=98.96 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=77.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCC--CeEEEEeeecCCChhhHhhhC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDA--RVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~--~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.+++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ .... +++++++|+.+..
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-------- 115 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-------- 115 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--------
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc--------
Confidence 567889999999999999999987 37999999999986541 1122 3899999876532
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
..++||+|+++.+.+ +. ......++..+.+ +|||||.+++.....
T Consensus 116 -~~~~~D~v~~~~~~~----~~------~~~~~~~l~~~~~------------------~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 116 -KDRKYNKIITNPPIR----AG------KEVLHRIIEEGKE------------------LLKDNGEIWVVIQTK 160 (194)
T ss_dssp -TTSCEEEEEECCCST----TC------HHHHHHHHHHHHH------------------HEEEEEEEEEEEEST
T ss_pred -ccCCceEEEECCCcc----cc------hhHHHHHHHHHHH------------------HcCCCCEEEEEECCC
Confidence 246899999975421 11 1224567777787 999999999988764
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=2.3e-13 Score=109.00 Aligned_cols=109 Identities=20% Similarity=0.131 Sum_probs=74.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.+++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.+ ....++.++++|+.+.... + ++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~----~--~~ 126 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-----IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT----L--PD 126 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC-----EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG----S--CT
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC-----CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcc----c--CC
Confidence 4678899999999999999997641 24899999999997542 1235788888887654111 1 35
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++||+|++|.... ...... ......++.++.+ +|||||+|++..+
T Consensus 127 ~~fD~V~~d~~~~--~~~~~~----~~~~~~~l~~~~r------------------~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 127 GHFDGILYDTYPL--SEETWH----THQFNFIKNHAFR------------------LLKPGGVLTYCNL 171 (236)
T ss_dssp TCEEEEEECCCCC--BGGGTT----THHHHHHHHTHHH------------------HEEEEEEEEECCH
T ss_pred CceEEEEECCccc--chhhhh----hhhHHHHHHHHHH------------------hcCCCeEEEEEec
Confidence 7999999952110 111111 2234466777887 9999999987543
No 113
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.35 E-value=4.5e-13 Score=107.18 Aligned_cols=112 Identities=13% Similarity=0.177 Sum_probs=77.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+++.+|||+|||+|.++..+++..+ +.+|+|||+++.++..+ ....+++++++|+.++ +.... +.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p----~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~----l~~~~-~~ 103 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP----EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV----LHKMI-PD 103 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT----TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH----HHHHS-CT
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC----CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH----HHHHc-CC
Confidence 3678999999999999999999864 47999999999997551 2235799999987653 11111 46
Q ss_pred CCccEEEeCCCCCCCCC-cccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGI-TTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++||.|+++.+.+.... +.... -....++..+.+ +|||||.|++.+-
T Consensus 104 ~~~d~v~~~~~~p~~~~~~~~rr----~~~~~~l~~~~r------------------~LkpGG~l~i~td 151 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWHKARHNKRR----IVQVPFAELVKS------------------KLQLGGVFHMATD 151 (218)
T ss_dssp TCEEEEEEESCCCCCSGGGGGGS----SCSHHHHHHHHH------------------HEEEEEEEEEEES
T ss_pred CChheEEEeCCCCccchhhhhhh----hhhHHHHHHHHH------------------HcCCCcEEEEEeC
Confidence 79999999754222111 10000 001247777777 9999999999863
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.34 E-value=5.6e-13 Score=105.80 Aligned_cols=110 Identities=12% Similarity=0.118 Sum_probs=77.4
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+++.++..+ ....+++++++|+.++. ... +.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~-----~~~-~~ 106 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP----DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT-----DVF-EP 106 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT----TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH-----HHC-CT
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC----CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH-----hhc-Cc
Confidence 4678999999999999999999864 58999999999997542 12357999999987532 111 35
Q ss_pred CCccEEEeCCCCCCCC-CcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 112 KGFSVILSDMCPSVSG-ITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
++||.|+++.+.+... .+.... -....++..+.+ +|||||.|++.+
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~r----l~~~~~l~~~~~------------------~LkpgG~l~~~t 153 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRR----LTYSHFLKKYEE------------------VMGKGGSIHFKT 153 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGS----TTSHHHHHHHHH------------------HHTTSCEEEEEE
T ss_pred CCcCEEEEECCCCCcCccccccc----cCcHHHHHHHHH------------------HcCCCCEEEEEe
Confidence 6899998865322111 111100 012467777777 999999999986
No 115
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.34 E-value=4.5e-13 Score=110.70 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++. +....+++++++|+.+...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-----~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-----KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-----CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------
Confidence 5789999999999999999999983 2379999999999754 2333458899999877642
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.++||+|+++.++.. ..++..+.+ +|||||+|++..+.
T Consensus 190 -~~~fD~Vi~~~p~~~---------------~~~l~~~~~------------------~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 190 -ENIADRILMGYVVRT---------------HEFIPKALS------------------IAKDGAIIHYHNTV 227 (278)
T ss_dssp -CSCEEEEEECCCSSG---------------GGGHHHHHH------------------HEEEEEEEEEEEEE
T ss_pred -cCCccEEEECCchhH---------------HHHHHHHHH------------------HCCCCeEEEEEEee
Confidence 468999999864211 245556666 99999999998775
No 116
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.34 E-value=5.7e-13 Score=104.30 Aligned_cols=101 Identities=29% Similarity=0.345 Sum_probs=75.4
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-CCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC-DARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~-~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
.++.+|||+|||+|.++..+ + ..+|+|+|+++.++..+.. ..+++++++|+.+++. +.++||+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~--------~~~~fD~ 98 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P----YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPF--------PGESFDV 98 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C----CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCS--------CSSCEEE
T ss_pred CCCCeEEEECCCCCHhHHhC----C----CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCC--------CCCcEEE
Confidence 47889999999999998877 2 2499999999999765221 1578888888876542 3578999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
|++... ..+..+ ...++.++.+ +|||||.+++..+..+
T Consensus 99 v~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 99 VLLFTT----LEFVED-------VERVLLEARR------------------VLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEEESC----TTTCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEECTT
T ss_pred EEEcCh----hhhcCC-------HHHHHHHHHH------------------HcCCCCEEEEEecCCc
Confidence 999542 122222 4567788887 9999999999987654
No 117
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.34 E-value=9.7e-13 Score=103.72 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=74.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----------cCCCCCeEEEEeeecCCChhhHhh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----------LHCDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----------~~~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
++++.+|||+|||+|.++..+++..+ +.+|+|+|+++.|+.. .....+++++++|+.+++..
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~---- 96 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP----SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL---- 96 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT----TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC----
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC----
Confidence 46788999999999999999999863 5899999999998753 12234799999999876532
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.+. |.|+..++ +.........-...++.++.+ +|||||++++.+
T Consensus 97 ----~~~-d~v~~~~~------~~~~~~~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~ 140 (218)
T 3mq2_A 97 ----SGV-GELHVLMP------WGSLLRGVLGSSPEMLRGMAA------------------VCRPGASFLVAL 140 (218)
T ss_dssp ----CCE-EEEEEESC------CHHHHHHHHTSSSHHHHHHHH------------------TEEEEEEEEEEE
T ss_pred ----CCC-CEEEEEcc------chhhhhhhhccHHHHHHHHHH------------------HcCCCcEEEEEe
Confidence 334 77664321 111000000011567788887 999999999964
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.34 E-value=1e-12 Score=113.60 Aligned_cols=105 Identities=27% Similarity=0.369 Sum_probs=79.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+ ....+++++++|+.+... ..+
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~--------~~~ 297 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM------GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALT--------EEA 297 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSC--------TTC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccc--------cCC
Confidence 46789999999999999999997 47999999999997652 122348899998876542 246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+||+|++|.+.+....... +....++..+.+ +|||||.++|..-
T Consensus 298 ~fD~Ii~npp~~~~~~~~~------~~~~~~l~~~~~------------------~LkpGG~l~iv~n 341 (381)
T 3dmg_A 298 RFDIIVTNPPFHVGGAVIL------DVAQAFVNVAAA------------------RLRPGGVFFLVSN 341 (381)
T ss_dssp CEEEEEECCCCCTTCSSCC------HHHHHHHHHHHH------------------HEEEEEEEEEEEC
T ss_pred CeEEEEECCchhhcccccH------HHHHHHHHHHHH------------------hcCcCcEEEEEEc
Confidence 9999999887554332222 225577888887 9999999999764
No 119
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.34 E-value=5e-13 Score=106.56 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=75.9
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
+.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+.. +..
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~ 131 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP------ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---------PTE 131 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT------TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---------CSS
T ss_pred CCCEEEeCCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC---------CCC
Confidence 359999999999999998764 57999999999987541 12356999999988754 245
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+||+|++... .+.... +....++..+.+ +|||||.|++..+...
T Consensus 132 ~fD~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 132 LFDLIFDYVF-----FCAIEP----EMRPAWAKSMYE------------------LLKPDGELITLMYPIT 175 (235)
T ss_dssp CEEEEEEESS-----TTTSCG----GGHHHHHHHHHH------------------HEEEEEEEEEEECCCS
T ss_pred CeeEEEEChh-----hhcCCH----HHHHHHHHHHHH------------------HCCCCcEEEEEEeccc
Confidence 8999998543 111111 114567778887 9999999999877543
No 120
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.34 E-value=5.9e-13 Score=108.02 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=75.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+.++.+|||+|||+|..+..+++.+++ +++|+++|+++.++.. .....+++++++|+.+. +..+ .
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----l~~~-~ 132 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPA---DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS----LESL-G 132 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH----HHTC-C
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH----HHhc-C
Confidence 356789999999999999999998763 5899999999998654 23345799999987542 1111 1
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|+++.. ... ....+..+.+ +|||||+|++.-
T Consensus 133 ~~~~fD~V~~d~~--------~~~------~~~~l~~~~~------------------~LkpGG~lv~~~ 170 (248)
T 3tfw_A 133 ECPAFDLIFIDAD--------KPN------NPHYLRWALR------------------YSRPGTLIIGDN 170 (248)
T ss_dssp SCCCCSEEEECSC--------GGG------HHHHHHHHHH------------------TCCTTCEEEEEC
T ss_pred CCCCeEEEEECCc--------hHH------HHHHHHHHHH------------------hcCCCeEEEEeC
Confidence 2358999999652 111 2356777777 999999999863
No 121
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.33 E-value=1.6e-12 Score=113.52 Aligned_cols=110 Identities=14% Similarity=0.148 Sum_probs=77.8
Q ss_pred HHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--------------CC-CCCeEEE
Q 038391 28 LQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--------------HC-DARVQTV 92 (186)
Q Consensus 28 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--------------~~-~~~~~~~ 92 (186)
.+++... .++++.+|||||||+|..+..++...+ ..+|+|||+++.++..+ .. ..+++++
T Consensus 163 ~~il~~l-~l~~gd~VLDLGCGtG~l~l~lA~~~g----~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 163 AQMIDEI-KMTDDDLFVDLGSGVGQVVLQVAAATN----CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp HHHHHHH-CCCTTCEEEEESCTTSHHHHHHHHHCC----CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred HHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 3344444 368899999999999999999998753 24699999999775331 11 2689999
Q ss_pred EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccC
Q 038391 93 SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPG 172 (186)
Q Consensus 93 ~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkpg 172 (186)
++|+.+++... .+ ..||+|+++.. .+..+ ....+.+..+ .||||
T Consensus 238 ~GD~~~lp~~d--~~----~~aDVVf~Nn~-----~F~pd-------l~~aL~Ei~R------------------vLKPG 281 (438)
T 3uwp_A 238 RGDFLSEEWRE--RI----ANTSVIFVNNF-----AFGPE-------VDHQLKERFA------------------NMKEG 281 (438)
T ss_dssp ECCTTSHHHHH--HH----HTCSEEEECCT-----TCCHH-------HHHHHHHHHT------------------TSCTT
T ss_pred ECcccCCcccc--cc----CCccEEEEccc-----ccCch-------HHHHHHHHHH------------------cCCCC
Confidence 99998765321 01 37999999642 12222 3445566677 99999
Q ss_pred cEEEEE
Q 038391 173 GHLVIK 178 (186)
Q Consensus 173 G~lvi~ 178 (186)
|+||+.
T Consensus 282 GrIVss 287 (438)
T 3uwp_A 282 GRIVSS 287 (438)
T ss_dssp CEEEES
T ss_pred cEEEEe
Confidence 999975
No 122
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.33 E-value=4.3e-13 Score=111.50 Aligned_cols=108 Identities=23% Similarity=0.291 Sum_probs=79.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..++.... ++.+|+|+|+++.++.. .....+++++++|+.+.+.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------- 184 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC---PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT-------- 184 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC---TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC---CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--------
Confidence 57889999999999999999863222 25899999999998654 1223459999999887642
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.++||+|+++.. ..+..+. .....++..+.+ +|||||+|++..+..
T Consensus 185 -~~~fD~v~~~~~----~~~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 185 -REGYDLLTSNGL----NIYEPDD----ARVTELYRRFWQ------------------ALKPGGALVTSFLTP 230 (305)
T ss_dssp -CSCEEEEECCSS----GGGCCCH----HHHHHHHHHHHH------------------HEEEEEEEEEECCCC
T ss_pred -cCCeEEEEECCh----hhhcCCH----HHHHHHHHHHHH------------------hcCCCeEEEEEecCC
Confidence 379999998542 2232232 223456777887 999999999988654
No 123
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.33 E-value=3.4e-12 Score=98.41 Aligned_cols=101 Identities=22% Similarity=0.245 Sum_probs=74.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+.+. .
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---------~ 95 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF---------D 95 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC---------C
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC---------C
Confidence 46779999999999999999987 479999999999876521 22368999998876531 4
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++||+|++... .+.... +.....+..+.+ +|||||.+++..+
T Consensus 96 ~~~D~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 96 RQYDFILSTVV-----LMFLEA----KTIPGLIANMQR------------------CTKPGGYNLIVAA 137 (199)
T ss_dssp CCEEEEEEESC-----GGGSCG----GGHHHHHHHHHH------------------TEEEEEEEEEEEE
T ss_pred CCceEEEEcch-----hhhCCH----HHHHHHHHHHHH------------------hcCCCeEEEEEEe
Confidence 68999999642 121111 114567777777 9999999877554
No 124
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.33 E-value=1.7e-13 Score=112.49 Aligned_cols=112 Identities=21% Similarity=0.215 Sum_probs=77.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----------CCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----------CDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----------~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.++..+. ...++.+..+|+..++. .+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~ 125 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK----DV 125 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH----HS
T ss_pred cCCCEEEEecCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc----cc
Confidence 56789999999999999999987 469999999999976521 12467777887765421 11
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.+.++||+|++.+. ...+..+.....+....++..+.+ +|||||+|++.+.+
T Consensus 126 -~~~~~fD~V~~~g~---~l~~~~~~~~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 -PAGDGFDAVICLGN---SFAHLPDSKGDQSEHRLALKNIAS------------------MVRPGGLLVIDHRN 177 (293)
T ss_dssp -CCTTCEEEEEECTT---CGGGSCCSSSSSHHHHHHHHHHHH------------------TEEEEEEEEEEEEC
T ss_pred -ccCCCeEEEEEcCh---HHhhcCccccCHHHHHHHHHHHHH------------------HcCCCeEEEEEeCC
Confidence 13579999999421 111222200011235577888887 99999999998754
No 125
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.33 E-value=1.1e-11 Score=100.67 Aligned_cols=116 Identities=18% Similarity=0.259 Sum_probs=77.5
Q ss_pred HHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCC------CCCCc-------CCCCCeEEEEee
Q 038391 29 QIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKV------KVPSL-------HCDARVQTVSAD 95 (186)
Q Consensus 29 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~------~i~~~-------~~~~~~~~~~~d 95 (186)
.+..... ++++.+|||+|||+|.++..+++..++ ..+|+|+|+++. ++..+ ....+++++++|
T Consensus 34 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~---~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 34 AIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGS---SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCT---TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCC---CCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 3344433 578899999999999999999998743 479999999997 65431 122578998887
Q ss_pred -ecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcE
Q 038391 96 -VINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGH 174 (186)
Q Consensus 96 -~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~ 174 (186)
+....... +.++||+|++... ..+..+. ..+++...+ +++|||+
T Consensus 110 ~~~~~~~~~------~~~~fD~v~~~~~----l~~~~~~-------~~~~~~~~~------------------l~~~gG~ 154 (275)
T 3bkx_A 110 NLSDDLGPI------ADQHFDRVVLAHS----LWYFASA-------NALALLFKN------------------MAAVCDH 154 (275)
T ss_dssp CTTTCCGGG------TTCCCSEEEEESC----GGGSSCH-------HHHHHHHHH------------------HTTTCSE
T ss_pred hhhhccCCC------CCCCEEEEEEccc----hhhCCCH-------HHHHHHHHH------------------HhCCCCE
Confidence 32222111 3578999998542 1222221 234555554 6667999
Q ss_pred EEEEEccCC
Q 038391 175 LVIKLLESQ 183 (186)
Q Consensus 175 lvi~~~~~~ 183 (186)
+++..+..+
T Consensus 155 l~~~~~~~~ 163 (275)
T 3bkx_A 155 VDVAEWSMQ 163 (275)
T ss_dssp EEEEEECSS
T ss_pred EEEEEecCC
Confidence 999876543
No 126
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=3e-12 Score=102.30 Aligned_cols=102 Identities=20% Similarity=0.164 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++.++ .++|+|+|+++.++.. .....++.++.+|+...... +. ...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~----~~-~~~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD----KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY----AN-IVE 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT----TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG----TT-TSC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC----CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc----cc-cCc
Confidence 56789999999999999999999874 3799999999988643 22236899999988752110 01 126
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
+||+|+.+.+ ... ....++..+.+ .|||||++++.
T Consensus 143 ~~D~v~~~~~-------~~~------~~~~~l~~~~~------------------~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYEDVA-------QPN------QAEILIKNAKW------------------FLKKGGYGMIA 177 (230)
T ss_dssp CEEEEEECCC-------STT------HHHHHHHHHHH------------------HEEEEEEEEEE
T ss_pred cEEEEEEecC-------Chh------HHHHHHHHHHH------------------hCCCCcEEEEE
Confidence 8999997532 111 13466777787 99999999997
No 127
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.33 E-value=1.4e-12 Score=101.84 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=74.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|.++..+++. + ..+|+|+|+++.++..+ ....+++++++|+.+. .
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----------~ 122 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-G----AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD----------V 122 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT----------C
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc----------C
Confidence 467889999999999999998875 2 36999999999997542 1222388999988653 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.++||+|+++... +....++..+.+ +|||||++++..+..
T Consensus 123 ~~~fD~i~~~~~~--------------~~~~~~l~~~~~------------------~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 123 DGKFDLIVANILA--------------EILLDLIPQLDS------------------HLNEDGQVIFSGIDY 162 (205)
T ss_dssp CSCEEEEEEESCH--------------HHHHHHGGGSGG------------------GEEEEEEEEEEEEEG
T ss_pred CCCceEEEECCcH--------------HHHHHHHHHHHH------------------hcCCCCEEEEEecCc
Confidence 4689999996531 113466666666 999999999976543
No 128
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.32 E-value=3e-11 Score=104.14 Aligned_cols=111 Identities=23% Similarity=0.333 Sum_probs=80.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
.++.+|||+|||+|.++..++++++. ..+|+|+|+++.++..+ .+++++++|+.+.. ..++||+|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~---~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~---------~~~~fD~I 102 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGT---AYRFVGVEIDPKALDLP---PWAEGILADFLLWE---------PGEAFDLI 102 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCS---CSEEEEEESCTTTCCCC---TTEEEEESCGGGCC---------CSSCEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCC---CCeEEEEECCHHHHHhC---CCCcEEeCChhhcC---------ccCCCCEE
Confidence 45679999999999999999998742 47999999999998765 57889999987653 24689999
Q ss_pred EeCCCCCCCCCcc-----cchHHHH-------------HHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 118 LSDMCPSVSGITT-----KDAALSV-------------ELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 118 ~~d~~~~~~~~~~-----~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
++|++........ ....... +....++..+.+ +|+|||++++.+
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~------------------~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVR------------------LLKPGGVLVFVV 164 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHH------------------HhCCCCEEEEEE
Confidence 9997643322200 1111111 122356777777 999999999887
Q ss_pred cc
Q 038391 180 LE 181 (186)
Q Consensus 180 ~~ 181 (186)
-.
T Consensus 165 p~ 166 (421)
T 2ih2_A 165 PA 166 (421)
T ss_dssp EG
T ss_pred Ch
Confidence 54
No 129
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=1.1e-12 Score=106.40 Aligned_cols=102 Identities=25% Similarity=0.256 Sum_probs=73.6
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
+++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+.......++++|+.+++. +.++||+|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~--------~~~~fD~v 118 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER------GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPF--------PSGAFEAV 118 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCS--------CTTCEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc------CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCC--------CCCCEEEE
Confidence 47889999999999999999986 47999999999997652211111377888776542 35789999
Q ss_pred EeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 118 LSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 118 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++... ..+.... ...++.++.+ +|||||.+++.+..
T Consensus 119 ~~~~~----~~~~~~~------~~~~l~~~~~------------------~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 119 LALGD----VLSYVEN------KDKAFSEIRR------------------VLVPDGLLIATVDN 154 (260)
T ss_dssp EECSS----HHHHCSC------HHHHHHHHHH------------------HEEEEEEEEEEEEB
T ss_pred EEcch----hhhcccc------HHHHHHHHHH------------------HcCCCeEEEEEeCC
Confidence 98321 1121111 4567788887 99999999998764
No 130
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.32 E-value=1.6e-12 Score=106.55 Aligned_cols=101 Identities=20% Similarity=0.175 Sum_probs=75.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+... .++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---------~~~ 184 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL------GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI---------QEN 184 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC---------CSC
T ss_pred CCCcEEEECCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc---------cCC
Confidence 6789999999999999999997 47999999999997641 112278999999876542 478
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
||+|+++.. .+.... .....++..+.+ +|||||.+++....
T Consensus 185 fD~i~~~~~-----~~~~~~----~~~~~~l~~~~~------------------~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 185 YDFIVSTVV-----FMFLNR----ERVPSIIKNMKE------------------HTNVGGYNLIVAAM 225 (286)
T ss_dssp EEEEEECSS-----GGGSCG----GGHHHHHHHHHH------------------TEEEEEEEEEEEEB
T ss_pred ccEEEEccc-----hhhCCH----HHHHHHHHHHHH------------------hcCCCcEEEEEEec
Confidence 999999653 221111 124467777777 99999998776543
No 131
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.32 E-value=9.2e-12 Score=107.13 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=74.6
Q ss_pred CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhh
Q 038391 35 KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
..+.++.+|||+|||+|.++..+++. + ..+|+|+|++ .|+.. .....+++++++|+.+...
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~-g----~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------ 126 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA-G----ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL------ 126 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT-T----CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC------
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc-C----CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc------
Confidence 44577899999999999999999987 2 3599999999 88644 2334569999999877642
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.++||+|+++...... .+.. ....++....+ +|||||.|++.
T Consensus 127 ---~~~~D~Iv~~~~~~~l-~~e~-------~~~~~l~~~~~------------------~LkpgG~li~~ 168 (376)
T 3r0q_C 127 ---PEKVDVIISEWMGYFL-LRES-------MFDSVISARDR------------------WLKPTGVMYPS 168 (376)
T ss_dssp ---SSCEEEEEECCCBTTB-TTTC-------THHHHHHHHHH------------------HEEEEEEEESS
T ss_pred ---CCcceEEEEcChhhcc-cchH-------HHHHHHHHHHh------------------hCCCCeEEEEe
Confidence 2689999996521111 1111 14456777767 99999999753
No 132
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.32 E-value=6.2e-13 Score=104.57 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=72.4
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCC--CCeEEEEeeecCCChhhHhhhCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCD--ARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~--~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++.+|||+|||+|.++..++... ..+|+|+|+++.+++.+ ... .+++++++|+.+.... + .
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~----~--~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-----AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ----P--Q 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-----CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS----C--C
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-----CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh----h--c
Confidence 57899999999999999887762 35899999999997642 111 5789999987643211 0 2
Q ss_pred CCC-ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH--cCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 111 QKG-FSVILSDMCPSVSGITTKDAALSVELGMRAVDLA--LGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 111 ~~~-~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.++ ||+|+++.+.. ... ....+... .+ +|||||.+++.....
T Consensus 122 ~~~~fD~I~~~~~~~-----~~~-------~~~~l~~~~~~~------------------~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-----FNL-------AEQAISLLCENN------------------WLKPNALIYVETEKD 166 (201)
T ss_dssp SSCCEEEEEECCCSS-----SCH-------HHHHHHHHHHTT------------------CEEEEEEEEEEEESS
T ss_pred cCCCCCEEEECCCCC-----Ccc-------HHHHHHHHHhcC------------------ccCCCcEEEEEECCC
Confidence 467 99999986521 111 22344444 55 899999999987654
No 133
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.32 E-value=2.1e-12 Score=102.68 Aligned_cols=103 Identities=19% Similarity=0.245 Sum_probs=74.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
++++.+|||+|||+|.++..+++. .+|+|+|+++.++..+. ...+++++++|+.+.+. .
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~-------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---------~ 94 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH-------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELEL---------P 94 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC---------S
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC-------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCC---------C
Confidence 467789999999999999988875 58999999999976521 22568899998876532 3
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++||+|++... ...+..+ .......+..+.+ +|||||++++.+.
T Consensus 95 ~~fD~v~~~~~---~~~~~~~----~~~~~~~l~~~~~------------------~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 95 EPVDAITILCD---SLNYLQT----EADVKQTFDSAAR------------------LLTDGGKLLFDVH 138 (243)
T ss_dssp SCEEEEEECTT---GGGGCCS----HHHHHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred CCcCEEEEeCC---chhhcCC----HHHHHHHHHHHHH------------------hcCCCeEEEEEcC
Confidence 68999998431 1112111 2235567777777 9999999998664
No 134
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.32 E-value=7.1e-13 Score=111.07 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=73.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-----CC-------CeEEEEeeecCCCh-hhH
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC-----DA-------RVQTVSADVINLPS-NQV 104 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~-----~~-------~~~~~~~d~~~~~~-~~l 104 (186)
+++.+|||+|||+|..+..++.. ++.+|+|+|+|+.||+.++. .. ++++.+.|+..... ..+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~-----~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l 121 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG-----EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSV 121 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHH
T ss_pred CCCCeEEEEecCCcHhHHHHHhc-----CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhh
Confidence 35789999999999877766654 14699999999999865221 11 25677777743321 122
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCCcc-cchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGITT-KDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
... .+.++||+|+|... .|. .+.. + ...++.++.+ +|||||+|++.+.+.
T Consensus 122 ~~~-~~~~~FD~V~~~~~-----lhy~~~~~---~-~~~~l~~~~r------------------~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 122 REV-FYFGKFNIIDWQFA-----IHYSFHPR---H-YATVMNNLSE------------------LTASGGKVLITTMDG 172 (302)
T ss_dssp HTT-CCSSCEEEEEEESC-----GGGTCSTT---T-HHHHHHHHHH------------------HEEEEEEEEEEEECH
T ss_pred hcc-ccCCCeeEEEECch-----HHHhCCHH---H-HHHHHHHHHH------------------HcCCCCEEEEEeCCH
Confidence 111 13579999998542 221 1111 1 3578888888 999999999988753
No 135
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.31 E-value=6.2e-12 Score=103.17 Aligned_cols=111 Identities=15% Similarity=0.162 Sum_probs=79.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+++.+|||+|||+|.++..+++.++ +.+|+|+|+++.++..+. ...+++++++|+.+.. +.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~----~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~---------~~ 174 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP----DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------AG 174 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT----TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------TT
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc---------cc
Confidence 5678999999999999999998864 479999999999975421 2236889988875431 24
Q ss_pred CCccEEEeCCCCCCCCC---------ccc-----chHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 112 KGFSVILSDMCPSVSGI---------TTK-----DAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
++||+|++++++..... +.+ ............+..+.+ .|||||++++
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~------------------~LkpgG~l~~ 236 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRN------------------ALVSGGFLLL 236 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGG------------------GEEEEEEEEE
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHH------------------hcCCCCEEEE
Confidence 68999999876432211 000 001112345677888887 9999999998
Q ss_pred EE
Q 038391 178 KL 179 (186)
Q Consensus 178 ~~ 179 (186)
..
T Consensus 237 ~~ 238 (276)
T 2b3t_A 237 EH 238 (276)
T ss_dssp EC
T ss_pred EE
Confidence 74
No 136
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.31 E-value=4e-12 Score=109.59 Aligned_cols=107 Identities=19% Similarity=0.131 Sum_probs=76.4
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CC--CCCeEEEEeeecCCChhhHhhh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HC--DARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~--~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
..++.+|||+|||+|.++..+++..+ +.+|+|+|+++.+++.+ .. ..+++++.+|+.+..
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p----~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~------- 288 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNP----QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV------- 288 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCT----TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC-------
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCC----CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC-------
Confidence 34568999999999999999999863 58999999999997552 11 125788889886532
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+.++||+|++|++.+....... .....++..+.+ +|||||.++|..-
T Consensus 289 --~~~~fD~Ii~nppfh~~~~~~~------~~~~~~l~~~~~------------------~LkpgG~l~iv~n 335 (375)
T 4dcm_A 289 --EPFRFNAVLCNPPFHQQHALTD------NVAWEMFHHARR------------------CLKINGELYIVAN 335 (375)
T ss_dssp --CTTCEEEEEECCCC-------C------CHHHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred --CCCCeeEEEECCCcccCcccCH------HHHHHHHHHHHH------------------hCCCCcEEEEEEE
Confidence 3568999999876432211111 123357778887 9999999999653
No 137
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.30 E-value=2.7e-13 Score=108.06 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=70.0
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecC-CChhhHhhhCCC-CCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVIN-LPSNQVRALSPK-QKG 113 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~-~~~~~l~~~~~~-~~~ 113 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+ ++. + .++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~--------~~~~~ 111 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ------AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPA--------GLGAP 111 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCT--------TCCCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCC--------cCCCC
Confidence 367899999999999999999987 479999999999976522 24579999999853 321 2 579
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
||+|+++. . ...++..+.+ +|||||+|+
T Consensus 112 fD~v~~~~--------~---------~~~~l~~~~~------------------~LkpgG~l~ 139 (226)
T 3m33_A 112 FGLIVSRR--------G---------PTSVILRLPE------------------LAAPDAHFL 139 (226)
T ss_dssp EEEEEEES--------C---------CSGGGGGHHH------------------HEEEEEEEE
T ss_pred EEEEEeCC--------C---------HHHHHHHHHH------------------HcCCCcEEE
Confidence 99999952 1 1134555565 999999998
No 138
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.30 E-value=1.4e-12 Score=103.11 Aligned_cols=102 Identities=17% Similarity=0.256 Sum_probs=75.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|.++..+++.+++ +++|+++|+++.++.. .....+++++++|+.+.. ..+...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~ 129 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSS---GGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL----QQIENE 129 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCS---SCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH----HHHHHT
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH----HHHHhc
Confidence 56789999999999999999998763 5799999999988654 233456999999886432 111101
Q ss_pred -CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 111 -QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 111 -~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.++||+|+++..+ . .....+..+.+ +|||||++++.
T Consensus 130 ~~~~fD~v~~d~~~--------~------~~~~~l~~~~~------------------~L~pgG~lv~~ 166 (223)
T 3duw_A 130 KYEPFDFIFIDADK--------Q------NNPAYFEWALK------------------LSRPGTVIIGD 166 (223)
T ss_dssp TCCCCSEEEECSCG--------G------GHHHHHHHHHH------------------TCCTTCEEEEE
T ss_pred CCCCcCEEEEcCCc--------H------HHHHHHHHHHH------------------hcCCCcEEEEe
Confidence 2579999997531 1 13356777777 99999999986
No 139
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.30 E-value=1.3e-12 Score=109.32 Aligned_cols=106 Identities=22% Similarity=0.238 Sum_probs=74.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----------CCCCCeEEEEeeecCCChhhHhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----------HCDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----------~~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
++..+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+ ....+++++.+|+......
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN----VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT----CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C----
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC----CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh----
Confidence 4568999999999999999998743 47999999999997541 1246899999998764321
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|.+.+....... ....+++.+.+ .|||||+|++..
T Consensus 154 ---~~~~fDvIi~D~~~p~~~~~~l-------~~~~f~~~~~~------------------~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 ---TSQTFDVIISDCTDPIGPGESL-------FTSAFYEGCKR------------------CLNPGGIFVAQN 198 (294)
T ss_dssp ---CCCCEEEEEECC-----------------CCHHHHHHHHH------------------TEEEEEEEEEEE
T ss_pred ---cCCCccEEEECCCCccCcchhc-------cHHHHHHHHHH------------------hcCCCCEEEEec
Confidence 2578999999875322111000 02467778887 999999999986
No 140
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.30 E-value=2.4e-12 Score=107.17 Aligned_cols=113 Identities=22% Similarity=0.174 Sum_probs=78.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-------------CCCCeEEEEeeecCCChhhH
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-------------CDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-------------~~~~~~~~~~d~~~~~~~~l 104 (186)
+++.+|||+|||+|.++..+++. +..+|+|+|+++.++..+. ...+++++++|+...+..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-- 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-----RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI-- 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST--
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-----CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchh--
Confidence 46789999999999999999985 2479999999999875421 223689999998775410
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
..+..+.++||+|++... .+.. .........++..+.+ +|||||.|++.++..
T Consensus 106 ~~~~~~~~~fD~V~~~~~-----l~~~--~~~~~~~~~~l~~~~~------------------~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFV-----CHYS--FESYEQADMMLRNACE------------------RLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCSSTTCCEEEEEEETC-----GGGG--GGSHHHHHHHHHHHHT------------------TEEEEEEEEEEEECH
T ss_pred hhcccCCCCEEEEEEecc-----hhhc--cCCHHHHHHHHHHHHH------------------HhCCCcEEEEecCCh
Confidence 001112358999999542 2221 0112335578888888 999999999998754
No 141
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.30 E-value=7.1e-13 Score=100.41 Aligned_cols=101 Identities=16% Similarity=0.202 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
++++.+|||+|||+|.++..+++.. .+|+|+|+++.++.... ...++++.++| ... +.++||
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~~~----------~~~~~D 77 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA------TKLYCIDINVIALKEVKEKFDSVITLSDP-KEI----------PDNSVD 77 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE------EEEEEECSCHHHHHHHHHHCTTSEEESSG-GGS----------CTTCEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc------CeEEEEeCCHHHHHHHHHhCCCcEEEeCC-CCC----------CCCceE
Confidence 4678899999999999999999973 59999999999876522 14578888887 111 357999
Q ss_pred EEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 116 VILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 116 ~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+|++.... .+..+ ...++..+.+ .|||||++++..+..+
T Consensus 78 ~v~~~~~l----~~~~~-------~~~~l~~~~~------------------~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 78 FILFANSF----HDMDD-------KQHVISEVKR------------------ILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEEEESCS----TTCSC-------HHHHHHHHHH------------------HEEEEEEEEEEEECSS
T ss_pred EEEEccch----hcccC-------HHHHHHHHHH------------------hcCCCCEEEEEEcCcc
Confidence 99996431 22222 4567777887 9999999999987654
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.30 E-value=4.1e-12 Score=102.42 Aligned_cols=102 Identities=25% Similarity=0.365 Sum_probs=77.9
Q ss_pred cCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhh
Q 038391 34 YKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
...++++.+|||+|||+|.++..+++.+++ +.+|+++|+++.+++.+ ....+++++++|+.+..
T Consensus 88 ~~~~~~~~~vldiG~G~G~~~~~l~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------ 158 (255)
T 3mb5_A 88 YAGISPGDFIVEAGVGSGALTLFLANIVGP---EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI------ 158 (255)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC------
T ss_pred hhCCCCCCEEEEecCCchHHHHHHHHHhCC---CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc------
Confidence 334688999999999999999999999654 58999999999986542 22345999999887542
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|+++.+. ....+..+.+ .|||||++++....
T Consensus 159 ---~~~~~D~v~~~~~~----------------~~~~l~~~~~------------------~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 159 ---EEENVDHVILDLPQ----------------PERVVEHAAK------------------ALKPGGFFVAYTPC 196 (255)
T ss_dssp ---CCCSEEEEEECSSC----------------GGGGHHHHHH------------------HEEEEEEEEEEESS
T ss_pred ---CCCCcCEEEECCCC----------------HHHHHHHHHH------------------HcCCCCEEEEEECC
Confidence 35689999997531 1235666666 99999999987643
No 143
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.30 E-value=1.1e-12 Score=105.18 Aligned_cols=104 Identities=17% Similarity=0.117 Sum_probs=75.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC--C----CCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH--C----DARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~--~----~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+++.+|||+|||+|.++..+++.. ..+|+|+|+++.++..+. . ..+++++++|+.+... +.
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--------~~ 144 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-----FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP--------EP 144 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-----CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC--------CS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC--------CC
Confidence 358899999999999999988874 369999999999975421 1 2357888888776542 24
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++||+|+++.. ..+..+ .....++..+.+ +|||||+|++..+.
T Consensus 145 ~~fD~v~~~~~----l~~~~~-----~~~~~~l~~~~~------------------~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 145 DSYDVIWIQWV----IGHLTD-----QHLAEFLRRCKG------------------SLRPNGIIVIKDNM 187 (241)
T ss_dssp SCEEEEEEESC----GGGSCH-----HHHHHHHHHHHH------------------HEEEEEEEEEEEEE
T ss_pred CCEEEEEEcch----hhhCCH-----HHHHHHHHHHHH------------------hcCCCeEEEEEEcc
Confidence 68999999642 112221 123467777787 99999999997654
No 144
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.29 E-value=3.5e-12 Score=97.69 Aligned_cols=66 Identities=23% Similarity=0.220 Sum_probs=55.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
.++.+|||+|||+|.++..+++. + +|+|+|+++.|+.. ..+++++++|+.+.. +.++||+|
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~------~-~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~---------~~~~fD~i 82 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR------N-TVVSTDLNIRALES---HRGGNLVRADLLCSI---------NQESVDVV 82 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT------S-EEEEEESCHHHHHT---CSSSCEEECSTTTTB---------CGGGCSEE
T ss_pred CCCCeEEEeccCccHHHHHHHhc------C-cEEEEECCHHHHhc---ccCCeEEECChhhhc---------ccCCCCEE
Confidence 45779999999999999999987 4 99999999999876 457899999987632 23689999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+++++
T Consensus 83 ~~n~~ 87 (170)
T 3q87_B 83 VFNPP 87 (170)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99865
No 145
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.29 E-value=8.7e-13 Score=104.55 Aligned_cols=100 Identities=25% Similarity=0.337 Sum_probs=74.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----C-------CCCeEEEEeeecCCChhhHh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----C-------DARVQTVSADVINLPSNQVR 105 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~-------~~~~~~~~~d~~~~~~~~l~ 105 (186)
++++.+|||+|||+|.++..+++.+++ .++|+++|+++.++.... . ..+++++++|+......
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGC---TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE--- 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCT---TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG---
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCC---CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc---
Confidence 678899999999999999999998753 469999999999875421 0 34789999988754322
Q ss_pred hhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 106 ALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.++||+|+++..+. + .+..+.+ .|||||+|++.+-..
T Consensus 149 -----~~~fD~i~~~~~~~----~-------------~~~~~~~------------------~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 149 -----EAPYDAIHVGAAAP----V-------------VPQALID------------------QLKPGGRLILPVGPA 185 (226)
T ss_dssp -----GCCEEEEEECSBBS----S-------------CCHHHHH------------------TEEEEEEEEEEESCT
T ss_pred -----CCCcCEEEECCchH----H-------------HHHHHHH------------------hcCCCcEEEEEEecC
Confidence 45899999965421 1 1123445 899999999987643
No 146
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.29 E-value=6.6e-12 Score=97.88 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=73.8
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++.+|||+|||+|.++..++..++ +.+|+|+|+++.++..+ ....+++++++|+.+.. +.+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---------~~~ 131 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP----EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------SEP 131 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---------CCS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---------ccC
Confidence 478999999999999999999864 47999999999986541 12235889999887653 246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+||+|+++. ... ...++..+.+ +|+|||.+++..
T Consensus 132 ~~D~i~~~~------~~~---------~~~~l~~~~~------------------~L~~gG~l~~~~ 165 (207)
T 1jsx_A 132 PFDGVISRA------FAS---------LNDMVSWCHH------------------LPGEQGRFYALK 165 (207)
T ss_dssp CEEEEECSC------SSS---------HHHHHHHHTT------------------SEEEEEEEEEEE
T ss_pred CcCEEEEec------cCC---------HHHHHHHHHH------------------hcCCCcEEEEEe
Confidence 899999843 111 3477888888 999999999874
No 147
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=4.3e-12 Score=101.89 Aligned_cols=107 Identities=15% Similarity=0.016 Sum_probs=71.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCC-CCc---------CCCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKV-PSL---------HCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i-~~~---------~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+++.+|||+|||+|.++..+++..+ +.+|+|+|+|+..+ +.+ ....++.++++|+.+++...
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~----~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~---- 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ----NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL---- 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT----TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG----
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC----CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc----
Confidence 5788999999999999999997643 57999999995443 211 12347899999988774321
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.+.+|.|.++++ +.............++.++.+ +|||||.|++..
T Consensus 95 ---~d~v~~i~~~~~------~~~~~~~~~~~~~~~l~~~~r------------------~LkpGG~l~i~~ 139 (225)
T 3p2e_A 95 ---KNIADSISILFP------WGTLLEYVIKPNRDILSNVAD------------------LAKKEAHFEFVT 139 (225)
T ss_dssp ---TTCEEEEEEESC------CHHHHHHHHTTCHHHHHHHHT------------------TEEEEEEEEEEE
T ss_pred ---cCeEEEEEEeCC------CcHHhhhhhcchHHHHHHHHH------------------hcCCCcEEEEEE
Confidence 246777776542 100000000011356788888 999999999933
No 148
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.28 E-value=2e-12 Score=104.00 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=73.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+++.+|||+|||+|.++..++...+ +.+|+|+|+++.++..+ ....+++++++|+.++... ....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~~ 139 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP----HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-----KDVR 139 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT----TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-----TTTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC----CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-----cccc
Confidence 5688999999999999999998643 57999999999886542 1223699999987654310 0014
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
++||+|+++. . .+ ...++..+.+ +|||||++++.
T Consensus 140 ~~fD~V~~~~------~--~~-------~~~~l~~~~~------------------~LkpgG~l~~~ 173 (240)
T 1xdz_A 140 ESYDIVTARA------V--AR-------LSVLSELCLP------------------LVKKNGLFVAL 173 (240)
T ss_dssp TCEEEEEEEC------C--SC-------HHHHHHHHGG------------------GEEEEEEEEEE
T ss_pred CCccEEEEec------c--CC-------HHHHHHHHHH------------------hcCCCCEEEEE
Confidence 6899999943 1 11 4578888887 99999999875
No 149
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=5.9e-12 Score=98.87 Aligned_cols=101 Identities=21% Similarity=0.217 Sum_probs=73.9
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++++.+|||+|||+|.++..+++..++ ..+|+++|+++.++..+. ...++++.++|+.....
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-------- 142 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGE---DGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-------- 142 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG--------
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC--------
Confidence 4678899999999999999999998743 379999999999875421 22468888888754321
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
..++||+|+++.. .+... ..+.+ +|||||++++.+-..
T Consensus 143 ~~~~fD~v~~~~~-----~~~~~------------~~~~~------------------~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 143 PLAPYDRIYTTAA-----GPKIP------------EPLIR------------------QLKDGGKLLMPVGRY 180 (215)
T ss_dssp GGCCEEEEEESSB-----BSSCC------------HHHHH------------------TEEEEEEEEEEESSS
T ss_pred CCCCeeEEEECCc-----hHHHH------------HHHHH------------------HcCCCcEEEEEECCC
Confidence 1358999999643 11111 23455 899999999987654
No 150
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.28 E-value=1.5e-12 Score=98.12 Aligned_cols=107 Identities=16% Similarity=0.078 Sum_probs=73.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-----CCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC-----DARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~-----~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
+++.+|||+|||+|.++..+++. +.+|+|+|+++.++..++. ..+++++++|+.+... .+...++
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~~~~~ 109 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASE------GWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLP----EAKAQGE 109 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHT------TCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHH----HHHHTTC
T ss_pred cCCCeEEEeCCCcCHHHHHHHHC------CCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHH----hhhccCC
Confidence 47889999999999999999987 3569999999999754211 1168888888765311 1111134
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH--cCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCCC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLA--LGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQDA 185 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~ 185 (186)
+||+|+++.+.. .... ..+... .+ +|||||.+++.+...+.+
T Consensus 110 ~~D~i~~~~~~~----~~~~---------~~~~~~~~~~------------------~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 110 RFTVAFMAPPYA----MDLA---------ALFGELLASG------------------LVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp CEEEEEECCCTT----SCTT---------HHHHHHHHHT------------------CEEEEEEEEEEEETTSCC
T ss_pred ceEEEEECCCCc----hhHH---------HHHHHHHhhc------------------ccCCCcEEEEEeCCccCC
Confidence 899999987532 1111 122222 36 999999999998776554
No 151
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.28 E-value=2.7e-12 Score=104.63 Aligned_cols=99 Identities=17% Similarity=0.095 Sum_probs=73.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+++.+|||+|||+|..+..++..++ +.+|+++|+++.++..+ ....+++++++|+.+..... ...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~-----~~~ 149 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP----ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA-----GHR 149 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT----TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST-----TTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc-----ccC
Confidence 5678999999999999999999864 58999999999997541 12246999999876543210 014
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
++||+|+++. ... ....+..+.+ +|||||+|++-
T Consensus 150 ~~fD~I~s~a------~~~---------~~~ll~~~~~------------------~LkpgG~l~~~ 183 (249)
T 3g89_A 150 EAYARAVARA------VAP---------LCVLSELLLP------------------FLEVGGAAVAM 183 (249)
T ss_dssp TCEEEEEEES------SCC---------HHHHHHHHGG------------------GEEEEEEEEEE
T ss_pred CCceEEEECC------cCC---------HHHHHHHHHH------------------HcCCCeEEEEE
Confidence 6899999953 111 3467777887 99999998863
No 152
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.28 E-value=1.2e-12 Score=105.98 Aligned_cols=112 Identities=10% Similarity=0.074 Sum_probs=75.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------------CCCCCeEEEEeeecCCChhhHh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------------HCDARVQTVSADVINLPSNQVR 105 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------------~~~~~~~~~~~d~~~~~~~~l~ 105 (186)
.++.+|||+|||+|.++..+++..+ +..|+|+|+++.|+..+ ....+++++++|+.+. +.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~----l~ 116 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP----DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH----LP 116 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST----TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC----HH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC----CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh----hh
Confidence 5567999999999999999998864 47999999999987531 2245799999998652 11
Q ss_pred hhCCCCCCccEEEeCCCCCCCC-CcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 106 ALSPKQKGFSVILSDMCPSVSG-ITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
... +.++||.|++..+.+... .+... .-....++..+.+ +|||||.|++.+-
T Consensus 117 ~~~-~~~~~D~v~~~~~dp~~k~~h~kr----r~~~~~~l~~~~~------------------~LkpGG~l~~~td 169 (235)
T 3ckk_A 117 NFF-YKGQLTKMFFLFPDPHFKRTKHKW----RIISPTLLAEYAY------------------VLRVGGLVYTITD 169 (235)
T ss_dssp HHC-CTTCEEEEEEESCC---------------CCCHHHHHHHHH------------------HEEEEEEEEEEES
T ss_pred hhC-CCcCeeEEEEeCCCchhhhhhhhh----hhhhHHHHHHHHH------------------HCCCCCEEEEEeC
Confidence 111 357899998865311100 00000 0001357777777 9999999998764
No 153
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.27 E-value=1.1e-12 Score=103.83 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=75.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|..+..+++.++. +++|+++|+++.++.. .....+++++++|+.+.. ..+...
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~ 135 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPK---DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTL----AELIHA 135 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH----HHHHTT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCC---CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHH----HHhhhc
Confidence 46789999999999999999998763 5899999999998654 233356999999875432 111101
Q ss_pred --CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 --QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 --~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.++||+|+++.. .. .....+..+.+ +|||||+|++.-
T Consensus 136 ~~~~~fD~v~~~~~--------~~------~~~~~l~~~~~------------------~L~pgG~lv~~~ 174 (225)
T 3tr6_A 136 GQAWQYDLIYIDAD--------KA------NTDLYYEESLK------------------LLREGGLIAVDN 174 (225)
T ss_dssp TCTTCEEEEEECSC--------GG------GHHHHHHHHHH------------------HEEEEEEEEEEC
T ss_pred cCCCCccEEEECCC--------HH------HHHHHHHHHHH------------------hcCCCcEEEEeC
Confidence 168999998652 11 13356777777 999999999853
No 154
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.27 E-value=2.9e-12 Score=100.73 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=71.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.++ ...+++++++|+.+... ...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-----~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~-------~~~~ 121 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-----AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA-------QKGT 121 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-----CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS-------SCCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-----CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh-------hcCC
Confidence 57899999999999999888762 259999999999976421 11478999888754211 1246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH--cCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLA--LGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+||+|+++++.. ... ....+... .+ +|||||.+++.....+
T Consensus 122 ~fD~V~~~~p~~-----~~~-------~~~~l~~l~~~~------------------~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 122 PHNIVFVDPPFR-----RGL-------LEETINLLEDNG------------------WLADEALIYVESEVEN 164 (202)
T ss_dssp CEEEEEECCSSS-----TTT-------HHHHHHHHHHTT------------------CEEEEEEEEEEEEGGG
T ss_pred CCCEEEECCCCC-----CCc-------HHHHHHHHHhcC------------------ccCCCcEEEEEECCCc
Confidence 899999986522 111 12233333 34 7999999999876544
No 155
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.27 E-value=3.9e-12 Score=105.05 Aligned_cols=113 Identities=11% Similarity=0.077 Sum_probs=68.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeE--EEEeCCCCCCCCcC-------CCCCeEEEEeeecCCChhhHh-hh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSV--VGIDVKKVKVPSLH-------CDARVQTVSADVINLPSNQVR-AL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v--~gvDis~~~i~~~~-------~~~~~~~~~~d~~~~~~~~l~-~~ 107 (186)
+++.+|||+|||+|.++..++..+...+++.+| +|+|+|+.|+..+. ...++++...+.. ...+. .+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKET---SSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSC---HHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecc---hhhhhhhh
Confidence 457799999999998776554332110013544 99999999976411 1234444322221 11111 10
Q ss_pred --CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 108 --SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 108 --~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
..++++||+|++.. ...|..+ ...++.++.+ +|||||+|++.....
T Consensus 128 ~~~~~~~~fD~V~~~~----~l~~~~d-------~~~~l~~~~r------------------~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQ----MLYYVKD-------IPATLKFFHS------------------LLGTNAKMLIIVVSG 175 (292)
T ss_dssp HTTTCCCCEEEEEEES----CGGGCSC-------HHHHHHHHHH------------------TEEEEEEEEEEEECT
T ss_pred ccccCCCceeEEEEee----eeeecCC-------HHHHHHHHHH------------------HcCCCcEEEEEEecC
Confidence 01357899999953 2233333 5578888888 999999999986543
No 156
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.27 E-value=2.9e-12 Score=104.22 Aligned_cols=105 Identities=11% Similarity=0.206 Sum_probs=74.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|+.+..+++.+++ +++|+++|+++.++.. .....+++++.+|+.+.... +..-...
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~---~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~-l~~~~~~ 153 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPE---DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDE-MIKDEKN 153 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCT---TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH-HHHSGGG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHH-HHhccCC
Confidence 46779999999999999999999864 5899999999998654 22335789999987643111 1000001
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.++||+|++|... .+ ....+..+.+ +|||||+|++.
T Consensus 154 ~~~fD~V~~d~~~-------~~-------~~~~l~~~~~------------------~LkpGG~lv~d 189 (247)
T 1sui_A 154 HGSYDFIFVDADK-------DN-------YLNYHKRLID------------------LVKVGGVIGYD 189 (247)
T ss_dssp TTCBSEEEECSCS-------TT-------HHHHHHHHHH------------------HBCTTCCEEEE
T ss_pred CCCEEEEEEcCch-------HH-------HHHHHHHHHH------------------hCCCCeEEEEe
Confidence 3689999997531 11 3356677777 99999999985
No 157
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=3e-12 Score=105.52 Aligned_cols=103 Identities=13% Similarity=0.044 Sum_probs=79.1
Q ss_pred cCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhh
Q 038391 34 YKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
...++++.+|||+|||+|.++..+++..+ .++|+|+|+++.+++.+ ....++.++++|+.+. .
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~----~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~------ 182 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK----PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-E------ 182 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC----CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-C------
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC----CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-C------
Confidence 44578899999999999999999999853 36999999999997541 1224688999998765 2
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
..++||+|++|++. . ....+..+.+ .|||||++++..+..
T Consensus 183 --~~~~~D~Vi~d~p~------~---------~~~~l~~~~~------------------~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 183 --LKDVADRVIMGYVH------K---------THKFLDKTFE------------------FLKDRGVIHYHETVA 222 (272)
T ss_dssp --CTTCEEEEEECCCS------S---------GGGGHHHHHH------------------HEEEEEEEEEEEEEE
T ss_pred --ccCCceEEEECCcc------c---------HHHHHHHHHH------------------HcCCCCEEEEEEcCc
Confidence 13589999998752 1 1235555566 899999999988765
No 158
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.26 E-value=1.5e-11 Score=97.51 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=72.3
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ...+++++++|+.+... ..
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~--------~~ 132 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEI------VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE--------EE 132 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG--------GG
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHH------cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc--------cC
Confidence 3678899999999999999999998 379999999999875421 11178999998876321 14
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
++||+|+++... +... ..+.+ .|||||++++..-..
T Consensus 133 ~~fD~v~~~~~~-----~~~~------------~~~~~------------------~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATA-----PTLL------------CKPYE------------------QLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBB-----SSCC------------HHHHH------------------TEEEEEEEEEEECSS
T ss_pred CCccEEEECCcH-----HHHH------------HHHHH------------------HcCCCcEEEEEEcCC
Confidence 689999996531 1111 13444 899999999987654
No 159
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.26 E-value=6.2e-12 Score=105.99 Aligned_cols=103 Identities=21% Similarity=0.348 Sum_probs=74.9
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----------------CCCCeEEEEeeecC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----------------CDARVQTVSADVIN 98 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----------------~~~~~~~~~~d~~~ 98 (186)
.++++.+|||+|||+|.++..+++.+++ .++|+|+|+++.++..+. ...+++++++|+.+
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~ 178 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGS---QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISG 178 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCC---CceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHH
Confidence 3688999999999999999999998753 489999999998865411 12579999999876
Q ss_pred CChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 99 LPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 99 ~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.... + +.++||+|+++++.+. ..+..+.+ +|||||+|++.
T Consensus 179 ~~~~-~-----~~~~fD~V~~~~~~~~----------------~~l~~~~~------------------~LkpgG~lv~~ 218 (336)
T 2b25_A 179 ATED-I-----KSLTFDAVALDMLNPH----------------VTLPVFYP------------------HLKHGGVCAVY 218 (336)
T ss_dssp CC-------------EEEEEECSSSTT----------------TTHHHHGG------------------GEEEEEEEEEE
T ss_pred cccc-c-----CCCCeeEEEECCCCHH----------------HHHHHHHH------------------hcCCCcEEEEE
Confidence 5311 1 2457999999763111 14566677 99999999987
Q ss_pred Ecc
Q 038391 179 LLE 181 (186)
Q Consensus 179 ~~~ 181 (186)
...
T Consensus 219 ~~~ 221 (336)
T 2b25_A 219 VVN 221 (336)
T ss_dssp ESS
T ss_pred eCC
Confidence 654
No 160
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.26 E-value=1e-11 Score=104.21 Aligned_cols=101 Identities=19% Similarity=0.203 Sum_probs=74.4
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++++.+|||+|||+|.++..+++..+. .++|+|+|+++.+++.+ ....++++.++|+.+....
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~------- 141 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGE---KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE------- 141 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-------
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc-------
Confidence 4678999999999999999999998642 36799999999997542 1224589999998764322
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.++||+|+++.... ... ..+.+ .|||||++++..-..
T Consensus 142 -~~~fD~Iv~~~~~~-----~~~------------~~~~~------------------~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 142 -FSPYDVIFVTVGVD-----EVP------------ETWFT------------------QLKEGGRVIVPINLK 178 (317)
T ss_dssp -GCCEEEEEECSBBS-----CCC------------HHHHH------------------HEEEEEEEEEEBCBG
T ss_pred -CCCeEEEEEcCCHH-----HHH------------HHHHH------------------hcCCCcEEEEEECCC
Confidence 36899999975321 111 23344 899999999986543
No 161
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.25 E-value=7.2e-12 Score=106.71 Aligned_cols=101 Identities=18% Similarity=0.186 Sum_probs=73.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+++ ++.. .....+++++++|+.+.+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g----~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------- 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-G----ARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL-------- 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-T----CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--------
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-C----CCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccC--------
Confidence 357889999999999999999987 2 36999999995 6543 2334569999999887642
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
+.++||+|+++..... ..+... ...++....+ +|||||.++.
T Consensus 130 ~~~~fD~Iis~~~~~~-l~~~~~-------~~~~l~~~~r------------------~LkpgG~li~ 171 (349)
T 3q7e_A 130 PVEKVDIIISEWMGYC-LFYESM-------LNTVLHARDK------------------WLAPDGLIFP 171 (349)
T ss_dssp SSSCEEEEEECCCBBT-BTBTCC-------HHHHHHHHHH------------------HEEEEEEEES
T ss_pred CCCceEEEEEcccccc-ccCchh-------HHHHHHHHHH------------------hCCCCCEEcc
Confidence 3579999999642111 111111 4567777777 9999999873
No 162
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.25 E-value=1.7e-11 Score=104.07 Aligned_cols=100 Identities=18% Similarity=0.242 Sum_probs=72.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+++ ++.. .....+++++++|+.+...
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g----~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-------- 127 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G----AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL-------- 127 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC--------
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C----CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC--------
Confidence 567889999999999999999987 2 35999999996 7543 2233689999999876542
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
+.++||+|+++.... ...+. .....++..+.+ +|||||.++
T Consensus 128 ~~~~~D~Ivs~~~~~-~l~~~-------~~~~~~l~~~~~------------------~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGY-FLLFE-------SMLDSVLYAKNK------------------YLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBT-TBTTT-------CHHHHHHHHHHH------------------HEEEEEEEE
T ss_pred CCCcEEEEEEcCchh-hccCH-------HHHHHHHHHHHh------------------hcCCCcEEE
Confidence 347899999964210 11111 124466777777 999999998
No 163
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=3.9e-12 Score=103.28 Aligned_cols=98 Identities=22% Similarity=0.357 Sum_probs=75.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+++.+|||+|||+|.++..+++.++ +.+|+|+|+++.++..+. ...++.+..+|+.+++. +.++||+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~--------~~~~fD~ 151 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP----EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF--------SDTSMDA 151 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT----TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB--------CTTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC----CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCC--------CCCceeE
Confidence 5788999999999999999999863 479999999999976522 22567888898876542 3568999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
|++... . ..+.++.+ +|||||++++.....+
T Consensus 152 v~~~~~--------~----------~~l~~~~~------------------~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 152 IIRIYA--------P----------CKAEELAR------------------VVKPGGWVITATPGPR 182 (269)
T ss_dssp EEEESC--------C----------CCHHHHHH------------------HEEEEEEEEEEEECTT
T ss_pred EEEeCC--------h----------hhHHHHHH------------------hcCCCcEEEEEEcCHH
Confidence 998432 1 13455666 9999999999886654
No 164
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=5.1e-12 Score=101.60 Aligned_cols=101 Identities=18% Similarity=0.242 Sum_probs=77.7
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-------CCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-------CDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-------~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+++ +.+|+++|+++.++..+. ...++++.++|+.+.+.
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~------- 162 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGE---KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL------- 162 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC-------
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-------
Confidence 4688999999999999999999998753 589999999999865421 24678999998876532
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|+++.+ . ....+..+.+ +|||||++++....
T Consensus 163 -~~~~~D~v~~~~~-------~---------~~~~l~~~~~------------------~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 163 -EEAAYDGVALDLM-------E---------PWKVLEKAAL------------------ALKPDRFLVAYLPN 200 (258)
T ss_dssp -CTTCEEEEEEESS-------C---------GGGGHHHHHH------------------HEEEEEEEEEEESC
T ss_pred -CCCCcCEEEECCc-------C---------HHHHHHHHHH------------------hCCCCCEEEEEeCC
Confidence 3468999999653 1 1145666666 99999999997754
No 165
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.25 E-value=2.7e-13 Score=108.53 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=58.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+ ....+++++++|+.+.. +
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---------~ 141 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---------S 141 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---------G
T ss_pred cCCCEEEECccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---------c
Confidence 47889999999999999999987 48999999999997642 12247999999987543 2
Q ss_pred CCCccEEEeCCCCC
Q 038391 111 QKGFSVILSDMCPS 124 (186)
Q Consensus 111 ~~~~D~V~~d~~~~ 124 (186)
.++||+|+++.++.
T Consensus 142 ~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 142 FLKADVVFLSPPWG 155 (241)
T ss_dssp GCCCSEEEECCCCS
T ss_pred cCCCCEEEECCCcC
Confidence 46899999987643
No 166
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.25 E-value=2.6e-12 Score=103.41 Aligned_cols=112 Identities=18% Similarity=0.217 Sum_probs=75.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCC--------------------------
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDA-------------------------- 87 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~-------------------------- 87 (186)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.++..+ ....
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES-----FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKE 129 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT-----EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcc-----cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHH
Confidence 567899999999999999988762 13899999999987542 1111
Q ss_pred -----Ce-EEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCC
Q 038391 88 -----RV-QTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSD 161 (186)
Q Consensus 88 -----~~-~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (186)
++ ++.++|+.+.... .. ...++||+|++... .+... ........++..+.+
T Consensus 130 ~~l~~~v~~~~~~d~~~~~~~--~~--~~~~~fD~v~~~~~-----l~~~~--~~~~~~~~~l~~~~~------------ 186 (265)
T 2i62_A 130 EKLRRAIKQVLKCDVTQSQPL--GG--VSLPPADCLLSTLC-----LDAAC--PDLPAYRTALRNLGS------------ 186 (265)
T ss_dssp HHHHHHEEEEEECCTTSSSTT--TT--CCCCCEEEEEEESC-----HHHHC--SSHHHHHHHHHHHHT------------
T ss_pred HHhhhhheeEEEeeeccCCCC--Cc--cccCCccEEEEhhh-----hhhhc--CChHHHHHHHHHHHh------------
Confidence 26 8888988765421 00 01278999998432 11000 012235677888888
Q ss_pred CCCCCcccccCcEEEEEEccCC
Q 038391 162 SSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 162 ~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+|||||+|++..+.++
T Consensus 187 ------~LkpgG~li~~~~~~~ 202 (265)
T 2i62_A 187 ------LLKPGGFLVMVDALKS 202 (265)
T ss_dssp ------TEEEEEEEEEEEESSC
T ss_pred ------hCCCCcEEEEEecCCC
Confidence 9999999999875543
No 167
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.25 E-value=7.5e-12 Score=98.21 Aligned_cols=102 Identities=18% Similarity=0.213 Sum_probs=74.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
+++.+|||+|||+|.++..+++. +.+|+|+|+++.++....... .+++++|+.+.... .+.++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~------~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN------GTRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMP------YEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT------TCEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCC------SCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCC------CCCCccCEE
Confidence 57889999999999999999987 379999999999876533221 36778887653211 135789999
Q ss_pred EeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 118 LSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 118 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++... ..+..+ ...++..+.+ +|||||.+++.+..
T Consensus 98 ~~~~~----l~~~~~-------~~~~l~~~~~------------------~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 98 IFGDV----LEHLFD-------PWAVIEKVKP------------------YIKQNGVILASIPN 132 (230)
T ss_dssp EEESC----GGGSSC-------HHHHHHHTGG------------------GEEEEEEEEEEEEC
T ss_pred EECCh----hhhcCC-------HHHHHHHHHH------------------HcCCCCEEEEEeCC
Confidence 98532 122222 3477888887 99999999998754
No 168
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.24 E-value=4.5e-12 Score=101.09 Aligned_cols=101 Identities=20% Similarity=0.311 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
..++.+|||+|||+|.++..+++.++ +.+|+++|+++.++..+ ....+++++++|+.+.... ..
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~- 122 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALP----EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK----LE- 122 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCT----TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH----HT-
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh----cc-
Confidence 35678999999999999999999874 48999999999986542 2234689999988654211 11
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
..++||+|+++.+.. .....+..+.+ +|||||++++.
T Consensus 123 ~~~~fD~I~~~~~~~--------------~~~~~l~~~~~------------------~L~pgG~lv~~ 159 (233)
T 2gpy_A 123 LYPLFDVLFIDAAKG--------------QYRRFFDMYSP------------------MVRPGGLILSD 159 (233)
T ss_dssp TSCCEEEEEEEGGGS--------------CHHHHHHHHGG------------------GEEEEEEEEEE
T ss_pred cCCCccEEEECCCHH--------------HHHHHHHHHHH------------------HcCCCeEEEEE
Confidence 146899999965311 14467777887 99999999996
No 169
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.24 E-value=6.8e-13 Score=108.31 Aligned_cols=113 Identities=19% Similarity=0.161 Sum_probs=73.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-------------------------------
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC------------------------------- 85 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~------------------------------- 85 (186)
..++.+|||+|||+|.++..++... ..+|+|+|+|+.|++.++.
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~-----~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~ 127 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS-----FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEK 127 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT-----EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh-----hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhH
Confidence 3567899999999998887766551 2379999999998763110
Q ss_pred ----CCCeE-EEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCC
Q 038391 86 ----DARVQ-TVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNS 160 (186)
Q Consensus 86 ----~~~~~-~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (186)
..++. ++++|+.....- ... ..++||+|++... .+... ........++.++.+
T Consensus 128 ~~~~~~~i~~~~~~D~~~~~~~--~~~--~~~~fD~V~~~~~-----l~~i~--~~~~~~~~~l~~i~r----------- 185 (263)
T 2a14_A 128 EEKLRAAVKRVLKCDVHLGNPL--APA--VLPLADCVLTLLA-----MECAC--CSLDAYRAALCNLAS----------- 185 (263)
T ss_dssp HHHHHHHEEEEEECCTTSSSTT--TTC--CCCCEEEEEEESC-----HHHHC--SSHHHHHHHHHHHHT-----------
T ss_pred HHHHHhhhheEEeccccCCCCC--Ccc--ccCCCCEeeehHH-----HHHhc--CCHHHHHHHHHHHHH-----------
Confidence 01233 778888763210 000 1458999999542 11110 001224578888888
Q ss_pred CCCCCCcccccCcEEEEEEccCC
Q 038391 161 DSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 161 ~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
+|||||+|++..+..+
T Consensus 186 -------~LKPGG~li~~~~~~~ 201 (263)
T 2a14_A 186 -------LLKPGGHLVTTVTLRL 201 (263)
T ss_dssp -------TEEEEEEEEEEEESSC
T ss_pred -------HcCCCcEEEEEEeecC
Confidence 9999999999875443
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.24 E-value=4e-12 Score=102.67 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=74.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHH--hCCCCCCCeEEEEeCCCCCCCCcC----CC------CC-----------------
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQS--LGPLDNGGSVVGIDVKKVKVPSLH----CD------AR----------------- 88 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~--~~~~~~~~~v~gvDis~~~i~~~~----~~------~~----------------- 88 (186)
.++.+|||+|||+|.++..+++. .+ +.+|+|+|+++.+++.++ .. .+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~----~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRS----LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYL 125 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGG----EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccC----CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccch
Confidence 35679999999999999999987 32 479999999999975421 11 01
Q ss_pred --------eE-------------EEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 038391 89 --------VQ-------------TVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLA 147 (186)
Q Consensus 89 --------~~-------------~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (186)
++ +.++|+.+.... ..+. .+.+||+|+++.+......+. +....+....++..+
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~--~~~~-~~~~fD~Iv~npp~~~~~~~~--~~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRAL--SAVL-AGSAPDVVLTDLPYGERTHWE--GQVPGQPVAGLLRSL 200 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGH--HHHH-TTCCCSEEEEECCGGGSSSSS--SCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhccccccccccceeeccccccccc--cccc-CCCCceEEEeCCCeecccccc--ccccccHHHHHHHHH
Confidence 56 888887653210 0000 134899999986422211111 011234456778888
Q ss_pred cCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 148 LGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
.+ +|||||+|++
T Consensus 201 ~~------------------~LkpgG~l~~ 212 (250)
T 1o9g_A 201 AS------------------ALPAHAVIAV 212 (250)
T ss_dssp HH------------------HSCTTCEEEE
T ss_pred HH------------------hcCCCcEEEE
Confidence 87 9999999998
No 171
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.24 E-value=2.4e-12 Score=101.11 Aligned_cols=98 Identities=16% Similarity=0.137 Sum_probs=73.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|..+..+++.++. +++|+++|+++.++..+ ....+++++++|+.+.. .. .
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~---~ 124 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISI---SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIA----AG---Q 124 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCT---TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHH----TT---C
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHh----cc---C
Confidence 35679999999999999999998753 58999999999986542 22346889998875421 11 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.+ ||+|+++... .+ ....+..+.+ +|||||.|++.
T Consensus 125 ~~-fD~v~~~~~~-------~~-------~~~~l~~~~~------------------~LkpgG~lv~~ 159 (210)
T 3c3p_A 125 RD-IDILFMDCDV-------FN-------GADVLERMNR------------------CLAKNALLIAV 159 (210)
T ss_dssp CS-EEEEEEETTT-------SC-------HHHHHHHHGG------------------GEEEEEEEEEE
T ss_pred CC-CCEEEEcCCh-------hh-------hHHHHHHHHH------------------hcCCCeEEEEE
Confidence 35 9999997421 11 3467777887 99999999984
No 172
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.23 E-value=1.6e-11 Score=93.57 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=74.6
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++. ..+|+|+|+++.++..+ ....++++.++|+.+. ..
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~------ 96 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGR------VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA-LC------ 96 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-HT------
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHh------cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-cc------
Confidence 3678899999999999999999987 37999999999886542 2225788888876541 11
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..++||+|+++... +. ....+..+.+ +|+|||.+++....
T Consensus 97 -~~~~~D~v~~~~~~-----~~---------~~~~l~~~~~------------------~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 97 -KIPDIDIAVVGGSG-----GE---------LQEILRIIKD------------------KLKPGGRIIVTAIL 136 (192)
T ss_dssp -TSCCEEEEEESCCT-----TC---------HHHHHHHHHH------------------TEEEEEEEEEEECB
T ss_pred -cCCCCCEEEECCch-----HH---------HHHHHHHHHH------------------hcCCCcEEEEEecC
Confidence 12589999996431 11 3467777777 99999999998764
No 173
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.22 E-value=2.6e-11 Score=95.15 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=68.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
..++.+|||+|||+|.++..++ .+|+|+|+++. +++++++|+.+.+. +.++||+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~---------~~v~~~D~s~~---------~~~~~~~d~~~~~~--------~~~~fD~ 118 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR---------NPVHCFDLASL---------DPRVTVCDMAQVPL--------EDESVDV 118 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC---------SCEEEEESSCS---------STTEEESCTTSCSC--------CTTCEEE
T ss_pred cCCCCeEEEECCcCCHHHHHhh---------ccEEEEeCCCC---------CceEEEeccccCCC--------CCCCEeE
Confidence 4678899999999999887661 58999999998 36678888776542 3578999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
|++.... +..+ ...++..+.+ +|+|||.+++..+..
T Consensus 119 v~~~~~l-----~~~~-------~~~~l~~~~~------------------~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 119 AVFCLSL-----MGTN-------IRDFLEEANR------------------VLKPGGLLKVAEVSS 154 (215)
T ss_dssp EEEESCC-----CSSC-------HHHHHHHHHH------------------HEEEEEEEEEEECGG
T ss_pred EEEehhc-----cccC-------HHHHHHHHHH------------------hCCCCeEEEEEEcCC
Confidence 9996532 2222 4567777777 999999999987653
No 174
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.22 E-value=1.6e-11 Score=105.76 Aligned_cols=92 Identities=22% Similarity=0.299 Sum_probs=73.0
Q ss_pred chhhhhHHhHHHHHHHcC-------CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeE
Q 038391 18 GYVARSAFKLLQIQKQYK-------LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQ 90 (186)
Q Consensus 18 ~y~~r~~~~l~~~~~~~~-------~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~ 90 (186)
+.-+|+.+||.|+...|. .+++|.++|||||+||+||..++++ +++|+|||+.+-. ......++++
T Consensus 183 ~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r------g~~V~aVD~~~l~-~~l~~~~~V~ 255 (375)
T 4auk_A 183 DAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR------NMWVYSVDNGPMA-QSLMDTGQVT 255 (375)
T ss_dssp TSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT------TCEEEEECSSCCC-HHHHTTTCEE
T ss_pred CCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC------CCEEEEEEhhhcC-hhhccCCCeE
Confidence 456999999999887763 4688999999999999999999998 6899999987532 2223446899
Q ss_pred EEEeeecCCChhhHhhhCCCCCCccEEEeCCCCC
Q 038391 91 TVSADVINLPSNQVRALSPKQKGFSVILSDMCPS 124 (186)
Q Consensus 91 ~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~ 124 (186)
++++|+..... ..++||+|+|||.++
T Consensus 256 ~~~~d~~~~~~--------~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 256 WLREDGFKFRP--------TRSNISWMVCDMVEK 281 (375)
T ss_dssp EECSCTTTCCC--------CSSCEEEEEECCSSC
T ss_pred EEeCccccccC--------CCCCcCEEEEcCCCC
Confidence 99999876542 246899999999643
No 175
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.22 E-value=4.6e-12 Score=100.42 Aligned_cols=108 Identities=18% Similarity=0.283 Sum_probs=75.3
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCC-CCCCCeEEEEeCCCCCCCCcC------C-----CCCeEEEEeeecCCChhh
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGP-LDNGGSVVGIDVKKVKVPSLH------C-----DARVQTVSADVINLPSNQ 103 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~-~~~~~~v~gvDis~~~i~~~~------~-----~~~~~~~~~d~~~~~~~~ 103 (186)
.++++.+|||+|||+|.++..+++..+. .++.++|+++|+++.++..+. . ..+++++++|+.......
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 4678899999999999999999998640 001369999999999865421 1 357999999987653100
Q ss_pred HhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 104 VRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.. ...+||+|+++...+ + .+..+.+ .|||||+|++.+..+
T Consensus 157 ~~----~~~~fD~I~~~~~~~----~-------------~~~~~~~------------------~LkpgG~lv~~~~~~ 196 (227)
T 2pbf_A 157 KK----ELGLFDAIHVGASAS----E-------------LPEILVD------------------LLAENGKLIIPIEED 196 (227)
T ss_dssp HH----HHCCEEEEEECSBBS----S-------------CCHHHHH------------------HEEEEEEEEEEEEET
T ss_pred Cc----cCCCcCEEEECCchH----H-------------HHHHHHH------------------hcCCCcEEEEEEccC
Confidence 00 135899999965321 1 1233445 899999999987653
No 176
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.22 E-value=1.1e-11 Score=101.61 Aligned_cols=100 Identities=17% Similarity=0.311 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------C-CCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------H-CDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~-~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+.+ +.+|+|+|+++.+++.+ . ...++++.++|+.+..
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~-------- 175 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNG---KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-------- 175 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTT---SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC--------
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCC---CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC--------
Confidence 4678899999999999999999998543 57999999999886541 1 2357889888876521
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|+++++ + ....+..+.+ .|||||++++....
T Consensus 176 -~~~~fD~Vi~~~~---------~-------~~~~l~~~~~------------------~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 176 -SDQMYDAVIADIP---------D-------PWNHVQKIAS------------------MMKPGSVATFYLPN 213 (275)
T ss_dssp -CSCCEEEEEECCS---------C-------GGGSHHHHHH------------------TEEEEEEEEEEESS
T ss_pred -cCCCccEEEEcCc---------C-------HHHHHHHHHH------------------HcCCCCEEEEEeCC
Confidence 3468999999653 1 1145666666 89999999998754
No 177
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.22 E-value=8.1e-12 Score=105.95 Aligned_cols=105 Identities=19% Similarity=0.173 Sum_probs=76.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.+++.+ ....+.+++.+|+... ..+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~----~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~----------~~~ 260 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP----KIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE----------VKG 260 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT----TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----------CCS
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc----------ccC
Confidence 4567999999999999999999853 36999999999987542 1222356777776543 246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+||+|+++.+.+.... ........++..+.+ +|||||.|++..-
T Consensus 261 ~fD~Iv~~~~~~~g~~------~~~~~~~~~l~~~~~------------------~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQ------TSLDAAQTLIRGAVR------------------HLNSGGELRIVAN 304 (343)
T ss_dssp CEEEEEECCCCCSSSH------HHHHHHHHHHHHHGG------------------GEEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcc------CCHHHHHHHHHHHHH------------------hCCCCcEEEEEEc
Confidence 8999999875332111 123346688888888 9999999998754
No 178
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.21 E-value=1.3e-11 Score=107.13 Aligned_cols=112 Identities=21% Similarity=0.248 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++|.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+. .....++.++|+.+.. ..+ .
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~------ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l----~~~---~ 278 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK------GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTL----RGL---E 278 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHH----HTC---C
T ss_pred hcCCCeEEEcccchhHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHH----HHh---c
Confidence 456999999999999999999986 456999999999975421 1112345677765431 111 2
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.||+|++|+++.... ..+...........+..+.+ +|||||+|++....
T Consensus 279 ~~fD~Ii~dpP~f~~~--~~~~~~~~~~~~~ll~~a~~------------------~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 279 GPFHHVLLDPPTLVKR--PEELPAMKRHLVDLVREALR------------------LLAEEGFLWLSSCS 328 (393)
T ss_dssp CCEEEEEECCCCCCSS--GGGHHHHHHHHHHHHHHHHH------------------TEEEEEEEEEEECC
T ss_pred CCCCEEEECCCcCCCC--HHHHHHHHHHHHHHHHHHHH------------------hcCCCCEEEEEECC
Confidence 3499999997642222 12233334445567777777 99999999966544
No 179
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.21 E-value=2.5e-11 Score=104.78 Aligned_cols=116 Identities=17% Similarity=0.167 Sum_probs=78.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCC-CeEEEEeeecCCChhhHhhhCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDA-RVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~-~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++. +.... +++++++|+.+.. ..+..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-g----a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l----~~~~~ 281 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-G----AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYF----KYARR 281 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-T----BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHH----HHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH----HHHHH
Confidence 57889999999999999999985 1 2489999999999754 22223 7999999986532 11111
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.+.+||+|++|++........ .....+.....+..+.+ +|+|||.|++..-..
T Consensus 282 ~~~~fD~Ii~DPP~~~~~~~~--~~~~~~~~~~ll~~~~~------------------~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 282 HHLTYDIIIIDPPSFARNKKE--VFSVSKDYHKLIRQGLE------------------ILSENGLIIASTNAA 334 (385)
T ss_dssp TTCCEEEEEECCCCC-----C--CCCHHHHHHHHHHHHHH------------------TEEEEEEEEEEECCT
T ss_pred hCCCccEEEECCCCCCCChhh--HHHHHHHHHHHHHHHHH------------------hcCCCcEEEEEeCCC
Confidence 245899999997642211011 11122334456666666 999999999987554
No 180
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.21 E-value=1.1e-11 Score=100.11 Aligned_cols=111 Identities=11% Similarity=0.145 Sum_probs=74.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------C--------CCCCeEEEEeeecCCChhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------H--------CDARVQTVSADVINLPSNQ 103 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~--------~~~~~~~~~~d~~~~~~~~ 103 (186)
+++.+|||+|||+|.++..+++..+ ..+|+|+|+++.++..+ . ...+++++++|+.+...
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~-- 121 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP----EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP-- 121 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST----TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC----CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH--
Confidence 4678999999999999999999863 47999999999986431 0 23579999999876321
Q ss_pred HhhhCCCCCCccEEEeCCCCCC-CCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 104 VRALSPKQKGFSVILSDMCPSV-SGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
... ..+++|.|+...+... ...+..... ....++..+.+ +|||||.|++.+
T Consensus 122 --~~~-~~~~~d~v~~~~p~p~~k~~~~~~r~----~~~~~l~~~~~------------------~LkpgG~l~~~t 173 (246)
T 2vdv_E 122 --NFF-EKGQLSKMFFCFPDPHFKQRKHKARI----ITNTLLSEYAY------------------VLKEGGVVYTIT 173 (246)
T ss_dssp --GTS-CTTCEEEEEEESCCCC------CSSC----CCHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred --Hhc-cccccCEEEEECCCcccccchhHHhh----ccHHHHHHHHH------------------HcCCCCEEEEEe
Confidence 111 3568999987553221 111110000 01356777777 999999999964
No 181
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.21 E-value=1.4e-11 Score=97.98 Aligned_cols=104 Identities=18% Similarity=0.283 Sum_probs=74.0
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCC--CCCCCeEEEEeCCCCCCCCcCC-----------CCCeEEEEeeecCCChh
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGP--LDNGGSVVGIDVKKVKVPSLHC-----------DARVQTVSADVINLPSN 102 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~--~~~~~~v~gvDis~~~i~~~~~-----------~~~~~~~~~d~~~~~~~ 102 (186)
.++++.+|||+|||+|.++..+++.++. ..+.++|+++|+++.++..+.. ..+++++.+|+.....
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~- 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP- 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC-
Confidence 4678899999999999999999997631 0001599999999998755211 3478999998875321
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
..++||+|+++... +.. ...+.+ .|||||+|++.+...
T Consensus 160 -------~~~~fD~I~~~~~~-----~~~------------~~~~~~------------------~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 160 -------PNAPYNAIHVGAAA-----PDT------------PTELIN------------------QLASGGRLIVPVGPD 197 (227)
T ss_dssp -------GGCSEEEEEECSCB-----SSC------------CHHHHH------------------TEEEEEEEEEEESCS
T ss_pred -------cCCCccEEEECCch-----HHH------------HHHHHH------------------HhcCCCEEEEEEecC
Confidence 13689999996532 111 133445 899999999998753
No 182
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.21 E-value=6.5e-11 Score=100.66 Aligned_cols=100 Identities=19% Similarity=0.271 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
..++.+|||+|||+|.++..+++. + ..+|+|+|+++ ++.. .....+++++++|+.+...
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g----~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-------- 113 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-G----ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------- 113 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--------
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-C----CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--------
Confidence 457889999999999999999986 2 46999999996 6432 2233679999999876532
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.++||+|+++.. +.+.... .....+..+.+ +|||||.+++.
T Consensus 114 -~~~~D~Ivs~~~----~~~~~~~-----~~~~~l~~~~~------------------~LkpgG~li~~ 154 (348)
T 2y1w_A 114 -PEQVDIIISEPM----GYMLFNE-----RMLESYLHAKK------------------YLKPSGNMFPT 154 (348)
T ss_dssp -SSCEEEEEECCC----BTTBTTT-----SHHHHHHHGGG------------------GEEEEEEEESC
T ss_pred -CCceeEEEEeCc----hhcCChH-----HHHHHHHHHHh------------------hcCCCeEEEEe
Confidence 358999999642 1111110 12345556667 99999999854
No 183
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.21 E-value=8.6e-12 Score=115.43 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=78.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCC-CCeEEEEeeecCCChhhHhhhCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCD-ARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~-~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.+|.+|||+|||+|.++..++.. +..+|+++|+|+.++.. +... .+++++++|+.+....
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-----ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~------- 605 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-----GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE------- 605 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH-------
T ss_pred cCCCcEEEeeechhHHHHHHHHC-----CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh-------
Confidence 36889999999999999999885 13579999999999754 2222 4799999998753211
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
..++||+|++|+++........+.....+.....+..+.+ +|+|||+|++..=
T Consensus 606 ~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~------------------~LkpgG~L~~s~~ 658 (703)
T 3v97_A 606 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKR------------------LLRAGGTIMFSNN 658 (703)
T ss_dssp CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHH------------------HEEEEEEEEEEEC
T ss_pred cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHH------------------hcCCCcEEEEEEC
Confidence 2568999999986422111111111223445567777777 9999999998763
No 184
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.21 E-value=1.1e-10 Score=99.77 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=81.8
Q ss_pred HHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhh
Q 038391 28 LQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 28 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
..+...+..++++.+|||+|||+|.++..+++.++ ..+++++|+ +.++..+....+++++.+|+.+ +.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~------ 265 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYP----LIKGINFDL-PQVIENAPPLSGIEHVGGDMFA-SV------ 265 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CC------
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCC----CCeEEEeCh-HHHHHhhhhcCCCEEEeCCccc-CC------
Confidence 34555554466788999999999999999999974 479999999 8887765555679999999865 21
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+ .||+|++.. ..+.... ......+..+.+ .|||||+|+|..+.
T Consensus 266 --~--~~D~v~~~~-----~lh~~~d----~~~~~~l~~~~~------------------~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 266 --P--QGDAMILKA-----VCHNWSD----EKCIEFLSNCHK------------------ALSPNGKVIIVEFI 308 (372)
T ss_dssp --C--CEEEEEEES-----SGGGSCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEEE
T ss_pred --C--CCCEEEEec-----ccccCCH----HHHHHHHHHHHH------------------hcCCCCEEEEEEec
Confidence 2 299999843 2332221 123467777777 99999999987543
No 185
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=1.9e-11 Score=99.60 Aligned_cols=98 Identities=23% Similarity=0.421 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..+. ....+++.++|+.+. + +.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~------g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-------~--~~ 182 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL------GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-------L--PF 182 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-------G--GG
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh------CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-------C--cC
Confidence 467899999999999999998886 359999999999975421 111277888776542 1 24
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++||+|+++.. . +.....+..+.+ +|||||++++..+.
T Consensus 183 ~~fD~Vv~n~~--------~------~~~~~~l~~~~~------------------~LkpgG~lils~~~ 220 (254)
T 2nxc_A 183 GPFDLLVANLY--------A------ELHAALAPRYRE------------------ALVPGGRALLTGIL 220 (254)
T ss_dssp CCEEEEEEECC--------H------HHHHHHHHHHHH------------------HEEEEEEEEEEEEE
T ss_pred CCCCEEEECCc--------H------HHHHHHHHHHHH------------------HcCCCCEEEEEeec
Confidence 68999999642 1 114466777777 99999999997654
No 186
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.20 E-value=2.1e-11 Score=101.16 Aligned_cols=107 Identities=16% Similarity=0.143 Sum_probs=72.1
Q ss_pred CCCEEEEEcccCCh----HHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC---------------------------C-
Q 038391 39 PGSSVLDLGCAPGA----WLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC---------------------------D- 86 (186)
Q Consensus 39 ~~~~vLDlGcG~G~----~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~---------------------------~- 86 (186)
++.+|||+|||+|. ++..+++.++....+.+|+|+|+|+.|++.++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 556667765521013589999999999754211 0
Q ss_pred ---------CCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCC
Q 038391 87 ---------ARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPV 157 (186)
Q Consensus 87 ---------~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (186)
.+++|.+.|+.+.+.. ..++||+|+|. ......+. +....++....+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-------~~~~fDlI~cr-----nvliyf~~----~~~~~vl~~~~~-------- 240 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-------VPGPFDAIFCR-----NVMIYFDK----TTQEDILRRFVP-------- 240 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-------CCCCEEEEEEC-----SSGGGSCH----HHHHHHHHHHGG--------
T ss_pred ceeechhhcccCeEEecccCCCCCC-------cCCCeeEEEEC-----CchHhCCH----HHHHHHHHHHHH--------
Confidence 2578888887764221 14689999993 22222222 234677888887
Q ss_pred CCCCCCCCCcccccCcEEEEEE
Q 038391 158 NNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 158 ~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.|+|||+|++..
T Consensus 241 ----------~L~pgG~L~lg~ 252 (274)
T 1af7_A 241 ----------LLKPDGLLFAGH 252 (274)
T ss_dssp ----------GEEEEEEEEECT
T ss_pred ----------HhCCCcEEEEEe
Confidence 999999999843
No 187
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.20 E-value=1.6e-11 Score=100.20 Aligned_cols=101 Identities=21% Similarity=0.302 Sum_probs=77.7
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC---------CCCCeEEEEeeecCCChhhHhh
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH---------CDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~---------~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
.++++.+|||+|||+|.++..+++.+++ +.+|+++|+++.+++.+. ...+++++++|+.+...
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~----- 167 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGP---AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL----- 167 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC-----
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC-----
Confidence 4688999999999999999999998753 589999999999865411 14578999998876532
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|+++.+ . ....+..+.+ +|+|||++++....
T Consensus 168 ---~~~~~D~v~~~~~-------~---------~~~~l~~~~~------------------~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 168 ---PDGSVDRAVLDML-------A---------PWEVLDAVSR------------------LLVAGGVLMVYVAT 205 (280)
T ss_dssp ---CTTCEEEEEEESS-------C---------GGGGHHHHHH------------------HEEEEEEEEEEESS
T ss_pred ---CCCceeEEEECCc-------C---------HHHHHHHHHH------------------hCCCCCEEEEEeCC
Confidence 2468999999653 1 1135666666 99999999998754
No 188
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.20 E-value=5.3e-12 Score=101.77 Aligned_cols=106 Identities=12% Similarity=0.181 Sum_probs=75.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|..+..+++.+++ +++|+++|+++.++.. .....+++++.+|+.+.... +..-...
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~-l~~~~~~ 144 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPD---DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDN-LLQGQES 144 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH-HHHSTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH-HHhccCC
Confidence 46789999999999999999999864 5899999999998644 22334789999987643111 1000001
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.++||+|++|..+ .. ....++.+.+ +|||||.+++..
T Consensus 145 ~~~fD~I~~d~~~--------~~------~~~~l~~~~~------------------~L~pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDADK--------PN------YIKYHERLMK------------------LVKVGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSCG--------GG------HHHHHHHHHH------------------HEEEEEEEEEEC
T ss_pred CCCcCEEEECCch--------HH------HHHHHHHHHH------------------hcCCCeEEEEec
Confidence 3689999997521 11 3456677777 999999999853
No 189
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.20 E-value=8.9e-12 Score=105.82 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=78.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCC-CeEEEEeeecCCChhhHhhhCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDA-RVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~-~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++.+|||+|||+|.++..+++. +.+|+++|+++.++..+ .... +++++++|+.+.... +..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~------ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~----~~~ 221 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA------GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQR----EER 221 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHH----HHH
T ss_pred CCCCcEEEcccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHH----HHh
Confidence 46789999999999999999986 45999999999997541 2222 489999988654211 100
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
.+++||+|++|+++...... .......+....++..+.+ +|||||.|++......
T Consensus 222 ~~~~fD~Ii~dPP~~~~~~~-~~~~~~~~~~~~ll~~~~~------------------~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 222 RGSTYDIILTDPPKFGRGTH-GEVWQLFDHLPLMLDICRE------------------ILSPKALGLVLTAYSI 276 (332)
T ss_dssp HTCCBSEEEECCCSEEECTT-CCEEEHHHHHHHHHHHHHH------------------TBCTTCCEEEEEECCT
T ss_pred cCCCceEEEECCccccCCch-HHHHHHHHHHHHHHHHHHH------------------hcCcCcEEEEEECCCC
Confidence 14689999998753111100 0001112334567777777 9999999888776554
No 190
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.20 E-value=7.8e-12 Score=98.81 Aligned_cols=96 Identities=21% Similarity=0.296 Sum_probs=71.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
++.+|||+|||+|.++..+++ . +|+|+++.++..+... +++++++|+...+. +.++||+|+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~--------~--~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~--------~~~~fD~v~ 107 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI--------K--IGVEPSERMAEIARKR-GVFVLKGTAENLPL--------KDESFDFAL 107 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC--------C--EEEESCHHHHHHHHHT-TCEEEECBTTBCCS--------CTTCEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHH--------H--hccCCCHHHHHHHHhc-CCEEEEcccccCCC--------CCCCeeEEE
Confidence 488999999999999887643 2 9999999997653322 68888888876542 356899999
Q ss_pred eCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 119 SDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+... ..+..+ ...++..+.+ +|||||.+++..+..
T Consensus 108 ~~~~----l~~~~~-------~~~~l~~~~~------------------~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 108 MVTT----ICFVDD-------PERALKEAYR------------------ILKKGGYLIVGIVDR 142 (219)
T ss_dssp EESC----GGGSSC-------HHHHHHHHHH------------------HEEEEEEEEEEEECS
T ss_pred Ecch----HhhccC-------HHHHHHHHHH------------------HcCCCcEEEEEEeCC
Confidence 9542 112222 3467777777 999999999987754
No 191
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.19 E-value=8.8e-12 Score=103.49 Aligned_cols=70 Identities=20% Similarity=0.167 Sum_probs=55.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
++.+|||+|||+|.++..++.. + +.+|+|+|+|+.++..+ ....+++++++|+.+.. .
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~----~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~----------~ 187 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S----DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF----------K 187 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S----SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG----------G
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc----------c
Confidence 5679999999999999999998 4 58999999999997541 22335999999986531 1
Q ss_pred CCc---cEEEeCCCC
Q 038391 112 KGF---SVILSDMCP 123 (186)
Q Consensus 112 ~~~---D~V~~d~~~ 123 (186)
++| |+|++|+++
T Consensus 188 ~~f~~~D~IvsnPPy 202 (284)
T 1nv8_A 188 EKFASIEMILSNPPY 202 (284)
T ss_dssp GGTTTCCEEEECCCC
T ss_pred cccCCCCEEEEcCCC
Confidence 367 999999764
No 192
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.19 E-value=3.2e-11 Score=104.10 Aligned_cols=116 Identities=22% Similarity=0.284 Sum_probs=81.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
+++.+|||+|||+|.++..+++. + ..+|+|+|+++.++.. +....+++++++|+.+... .+...
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g----~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~----~~~~~ 286 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-G----ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEME----KLQKK 286 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH----HHHHT
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-C----CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHH----HHHhh
Confidence 47899999999999999999986 2 3599999999998754 1222378999998865421 11112
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+.+||+|++|++... ................+..+.+ +|+|||.|++.....
T Consensus 287 ~~~fD~Vi~dpP~~~--~~~~~~~~~~~~~~~~l~~~~~------------------~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 287 GEKFDIVVLDPPAFV--QHEKDLKAGLRAYFNVNFAGLN------------------LVKDGGILVTCSCSQ 338 (396)
T ss_dssp TCCEEEEEECCCCSC--SSGGGHHHHHHHHHHHHHHHHT------------------TEEEEEEEEEEECCT
T ss_pred CCCCCEEEECCCCCC--CCHHHHHHHHHHHHHHHHHHHH------------------hcCCCcEEEEEECCC
Confidence 468999999875322 1112222333445677777887 999999999887653
No 193
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=1.7e-11 Score=92.96 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+. ...+++++++|+.+ .. +
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~--------~ 97 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAKR------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VL--------D 97 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHTT------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HG--------G
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cc--------c
Confidence 567889999999999999999982 589999999999875421 12578899998765 21 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.++||+|+++.. .+ ....+..+.+ + |||.+++....
T Consensus 98 ~~~~D~i~~~~~--------~~-------~~~~l~~~~~------------------~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 98 KLEFNKAFIGGT--------KN-------IEKIIEILDK------------------K--KINHIVANTIV 133 (183)
T ss_dssp GCCCSEEEECSC--------SC-------HHHHHHHHHH------------------T--TCCEEEEEESC
T ss_pred CCCCcEEEECCc--------cc-------HHHHHHHHhh------------------C--CCCEEEEEecc
Confidence 368999999653 11 4467777775 5 99999998754
No 194
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.19 E-value=7.3e-12 Score=104.18 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=76.3
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.+++|++|||+|||+|.++..++.. +..+|+++|+++.+++. +....+++++++|+.++.
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~-----g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-------- 188 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVY-----GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-------- 188 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHH-----TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--------
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHh-----cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--------
Confidence 3689999999999999999999987 24699999999988543 455678999999987764
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..+.||.|+.+.++.. ..++..+.+ +||+||++.+..+.
T Consensus 189 -~~~~~D~Vi~~~p~~~---------------~~~l~~a~~------------------~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 189 -GENIADRILMGYVVRT---------------HEFIPKALS------------------IAKDGAIIHYHNTV 227 (278)
T ss_dssp -CCSCEEEEEECCCSSG---------------GGGHHHHHH------------------HEEEEEEEEEEEEE
T ss_pred -cccCCCEEEECCCCcH---------------HHHHHHHHH------------------HcCCCCEEEEEeee
Confidence 3468999999875322 123444555 89999998776553
No 195
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.19 E-value=1.4e-11 Score=97.58 Aligned_cols=103 Identities=19% Similarity=0.238 Sum_probs=75.0
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+.++.+|||+|||+|..+..+++.++. +++|+++|+++.++.. .....+++++++|+.+.. ..+..
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~~~~~ 139 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPA---DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL----DELLA 139 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCT---TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH----HHHHH
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHH----HHHHh
Confidence 356789999999999999999998753 5799999999998654 123357999999875431 11110
Q ss_pred CC--CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 110 KQ--KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 110 ~~--~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.+ ++||+|++|.. . .. ....+..+.+ +|+|||.+++.
T Consensus 140 ~~~~~~~D~v~~d~~------~-~~-------~~~~l~~~~~------------------~L~pgG~lv~~ 178 (229)
T 2avd_A 140 AGEAGTFDVAVVDAD------K-EN-------CSAYYERCLQ------------------LLRPGGILAVL 178 (229)
T ss_dssp TTCTTCEEEEEECSC------S-TT-------HHHHHHHHHH------------------HEEEEEEEEEE
T ss_pred cCCCCCccEEEECCC------H-HH-------HHHHHHHHHH------------------HcCCCeEEEEE
Confidence 11 68999999753 1 11 3356677777 99999999984
No 196
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=1.2e-11 Score=104.74 Aligned_cols=108 Identities=13% Similarity=0.096 Sum_probs=78.4
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
.+|||||||+|..+..+++.++ +.+|++||+++.+++.+ ....+++++.+|+.... ..+ +.++|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p----~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l----~~~--~~~~f 160 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP----QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA----ESF--TPASR 160 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST----TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH----HTC--CTTCE
T ss_pred CEEEEEECCcCHHHHHHHHHCC----CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH----hhc--cCCCC
Confidence 3999999999999999999764 47999999999987541 12468999999986432 111 24689
Q ss_pred cEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 115 SVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 115 D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
|+|++|...+.. ...+.. ...++..+.+ .|||||+|++......
T Consensus 161 DvIi~D~~~~~~---~~~~L~----t~efl~~~~r------------------~LkpgGvlv~~~~~~~ 204 (317)
T 3gjy_A 161 DVIIRDVFAGAI---TPQNFT----TVEFFEHCHR------------------GLAPGGLYVANCGDHS 204 (317)
T ss_dssp EEEEECCSTTSC---CCGGGS----BHHHHHHHHH------------------HEEEEEEEEEEEEECT
T ss_pred CEEEECCCCccc---cchhhh----HHHHHHHHHH------------------hcCCCcEEEEEecCCc
Confidence 999998642221 111100 2467888887 9999999999987543
No 197
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.19 E-value=7.4e-11 Score=99.56 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=70.6
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|.++..+++. + ..+|+|+|++ .++.. .....+++++++|+.+... +
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g----~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~ 102 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G----AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL--------P 102 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C----CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC--------S
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C----CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC--------C
Confidence 46789999999999999999886 2 3599999999 46543 2334579999999876542 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
.++||+|+++..... ..+.. ....++....+ +|||||.++
T Consensus 103 ~~~~D~Ivs~~~~~~-l~~~~-------~~~~~l~~~~~------------------~LkpgG~li 142 (328)
T 1g6q_1 103 FPKVDIIISEWMGYF-LLYES-------MMDTVLYARDH------------------YLVEGGLIF 142 (328)
T ss_dssp SSCEEEEEECCCBTT-BSTTC-------CHHHHHHHHHH------------------HEEEEEEEE
T ss_pred CCcccEEEEeCchhh-cccHH-------HHHHHHHHHHh------------------hcCCCeEEE
Confidence 468999999642111 11111 13456666666 999999997
No 198
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.18 E-value=1.3e-11 Score=101.21 Aligned_cols=100 Identities=20% Similarity=0.253 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++.+++ +.+|+++|+++.+++.+ ....++++..+|+.+..
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------- 177 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGS---SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF-------- 177 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTT---TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--------
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--------
Confidence 4678899999999999999999998653 58999999999886542 12257888888876541
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+.++||+|+++++. ....+..+.+ .|+|||.|++....
T Consensus 178 -~~~~~D~V~~~~~~----------------~~~~l~~~~~------------------~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 178 -DEKDVDALFLDVPD----------------PWNYIDKCWE------------------ALKGGGRFATVCPT 215 (277)
T ss_dssp -SCCSEEEEEECCSC----------------GGGTHHHHHH------------------HEEEEEEEEEEESS
T ss_pred -cCCccCEEEECCcC----------------HHHHHHHHHH------------------HcCCCCEEEEEeCC
Confidence 34689999997631 1135556666 89999999997753
No 199
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.18 E-value=5.3e-11 Score=102.83 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=69.1
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
+|++|||+|||+|.++..+++. + ..+|+|||.++ ++.. +....+++++++++.++.. .
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G----A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l---------p 147 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G----ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL---------P 147 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T----CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC---------S
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C----CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC---------C
Confidence 6889999999999888777765 2 36899999996 5322 4556789999999877642 4
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
++||+|++...- ....+. .+...++....+ +|||||.++
T Consensus 148 e~~DvivsE~~~-~~l~~e-------~~l~~~l~a~~r------------------~Lkp~G~~i 186 (376)
T 4hc4_A 148 EQVDAIVSEWMG-YGLLHE-------SMLSSVLHARTK------------------WLKEGGLLL 186 (376)
T ss_dssp SCEEEEECCCCB-TTBTTT-------CSHHHHHHHHHH------------------HEEEEEEEE
T ss_pred ccccEEEeeccc-cccccc-------chhhhHHHHHHh------------------hCCCCceEC
Confidence 689999995420 111111 124456666666 999999987
No 200
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.17 E-value=2.3e-10 Score=97.91 Aligned_cols=110 Identities=13% Similarity=0.177 Sum_probs=81.0
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+...+..+++..+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+....+++++.+|+.+ +.
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~-------- 259 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYP----SINAINFDL-PHVIQDAPAFSGVEHLGGDMFD-GV-------- 259 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CC--------
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhCC----CCEEEEEeh-HHHHHhhhhcCCCEEEecCCCC-CC--------
Confidence 334444356678999999999999999999975 479999999 8887776666789999999875 21
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+. . |+|++.. ..|.... +.....++++.+ .|||||+|+|..+..
T Consensus 260 p~-~-D~v~~~~-----vlh~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 260 PK-G-DAIFIKW-----ICHDWSD----EHCLKLLKNCYA------------------ALPDHGKVIVAEYIL 303 (368)
T ss_dssp CC-C-SEEEEES-----CGGGBCH----HHHHHHHHHHHH------------------HSCTTCEEEEEECCC
T ss_pred CC-C-CEEEEec-----hhhcCCH----HHHHHHHHHHHH------------------HcCCCCEEEEEEecc
Confidence 22 2 9998843 2333321 224567777777 999999999876543
No 201
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.16 E-value=8.8e-12 Score=104.05 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=73.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----------CCCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----------HCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----------~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+.+.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+ ....+++++.+|+......
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----- 159 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS----VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK----- 159 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT----CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-----
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-----
Confidence 4568999999999999999998753 47999999999886531 1146899999987643211
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|.+.+..+. ... .....++..+.+ .|||||+|++..
T Consensus 160 --~~~~fD~Ii~d~~~~~~~~--~~~----l~~~~~l~~~~~------------------~LkpgG~lv~~~ 205 (296)
T 1inl_A 160 --FKNEFDVIIIDSTDPTAGQ--GGH----LFTEEFYQACYD------------------ALKEDGVFSAET 205 (296)
T ss_dssp --CSSCEEEEEEEC----------------CCSHHHHHHHHH------------------HEEEEEEEEEEC
T ss_pred --CCCCceEEEEcCCCcccCc--hhh----hhHHHHHHHHHH------------------hcCCCcEEEEEc
Confidence 2468999999864320110 000 012467777777 999999999974
No 202
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.15 E-value=6.8e-12 Score=103.25 Aligned_cols=110 Identities=23% Similarity=0.335 Sum_probs=68.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC----C----------------C----------
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC----D----------------A---------- 87 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~----~----------------~---------- 87 (186)
.++.+|||+|||+|.....++... +.+|+|+|+|+.|++.+.. . .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 144 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSH-----FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKE 144 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGG-----CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccC-----CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhH
Confidence 367899999999999554444432 4699999999999753110 0 0
Q ss_pred ------CeEEEEeeecC-CChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCC
Q 038391 88 ------RVQTVSADVIN-LPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNS 160 (186)
Q Consensus 88 ------~~~~~~~d~~~-~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (186)
.+.++++|+.+ .+.. ....+.++||+|++... .+.... .......++.++.+
T Consensus 145 ~~~~~~~~~~~~~D~~~~~~~~---~~~~~~~~fD~V~~~~~-----l~~~~~--~~~~~~~~l~~~~r----------- 203 (289)
T 2g72_A 145 RQLRARVKRVLPIDVHQPQPLG---AGSPAPLPADALVSAFC-----LEAVSP--DLASFQRALDHITT----------- 203 (289)
T ss_dssp HHHHHHEEEEECCCTTSSSTTC---SSCSSCSSEEEEEEESC-----HHHHCS--SHHHHHHHHHHHHT-----------
T ss_pred HHHHhhhceEEecccCCCCCcc---ccccCCCCCCEEEehhh-----hhhhcC--CHHHHHHHHHHHHH-----------
Confidence 13455567765 3211 00013467999999542 111000 01235678888888
Q ss_pred CCCCCCcccccCcEEEEEEc
Q 038391 161 DSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 161 ~~~~~~~~LkpgG~lvi~~~ 180 (186)
+|||||+|++...
T Consensus 204 -------~LkpGG~l~~~~~ 216 (289)
T 2g72_A 204 -------LLRPGGHLLLIGA 216 (289)
T ss_dssp -------TEEEEEEEEEEEE
T ss_pred -------hcCCCCEEEEEEe
Confidence 9999999998743
No 203
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.15 E-value=7e-12 Score=101.23 Aligned_cols=79 Identities=10% Similarity=0.074 Sum_probs=57.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCC-
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPK- 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~- 110 (186)
++.+|||+|||+|.++..+++..+ +.+|+|+|+++.++.. .....+++++++|+.+..... +...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN----GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA---LKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT---STTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh---hhccc
Confidence 577999999999999999998763 4799999999999754 123346999999876521110 1001
Q ss_pred CCCccEEEeCCCCC
Q 038391 111 QKGFSVILSDMCPS 124 (186)
Q Consensus 111 ~~~~D~V~~d~~~~ 124 (186)
.++||+|++|++..
T Consensus 138 ~~~fD~i~~npp~~ 151 (254)
T 2h00_A 138 EIIYDFCMCNPPFF 151 (254)
T ss_dssp SCCBSEEEECCCCC
T ss_pred CCcccEEEECCCCc
Confidence 25899999987643
No 204
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.15 E-value=2.9e-11 Score=103.88 Aligned_cols=114 Identities=21% Similarity=0.243 Sum_probs=78.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------------cCCCCCeEEEEeeecCCChhhH
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------------LHCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------------~~~~~~~~~~~~d~~~~~~~~l 104 (186)
.++|.+|||+|||+|+.|.++++.+. ++.|+++|+++.++.. .....++.+...|...+...
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~----~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~-- 219 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGC----CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL-- 219 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTC----EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH--
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcC----CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh--
Confidence 68899999999999999999999754 4689999999987532 11224567777776543221
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCC--ccc--------chHH---HHHHHHHHHHHHcCCcccCCCCCCCCCCCCCccccc
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGI--TTK--------DAAL---SVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKP 171 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~--~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkp 171 (186)
..+.||.|++|++|+..|. ... .... ...+....+..+.+ +|||
T Consensus 220 -----~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~------------------~lkp 276 (359)
T 4fzv_A 220 -----EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLL------------------ATKP 276 (359)
T ss_dssp -----STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHH------------------TEEE
T ss_pred -----ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHh------------------cCCC
Confidence 3578999999999987522 111 1111 12234456666666 9999
Q ss_pred CcEEEEEE
Q 038391 172 GGHLVIKL 179 (186)
Q Consensus 172 gG~lvi~~ 179 (186)
||+||=.+
T Consensus 277 GG~LVYsT 284 (359)
T 4fzv_A 277 GGHVVYST 284 (359)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99999554
No 205
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.15 E-value=2.4e-11 Score=104.54 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=80.7
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++.+|||+|||+|.++..+++. ..+|+|+|+++.++..+ +...+++++++|+.+... .+...+.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~----~~~~~~~ 278 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG------FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLR----RLEKEGE 278 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHH----HHHHTTC
T ss_pred CCCeEEEeeeccCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHH----HHHhcCC
Confidence 7789999999999999999997 37999999999997541 122348999998865421 1111246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+||+|++|++.... ...............+..+.+ +|+|||+|++.....
T Consensus 279 ~fD~Ii~dpP~~~~--~~~~~~~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 279 RFDLVVLDPPAFAK--GKKDVERAYRAYKEVNLRAIK------------------LLKEGGILATASCSH 328 (382)
T ss_dssp CEEEEEECCCCSCC--STTSHHHHHHHHHHHHHHHHH------------------TEEEEEEEEEEECCT
T ss_pred CeeEEEECCCCCCC--ChhHHHHHHHHHHHHHHHHHH------------------hcCCCCEEEEEECCC
Confidence 89999999763221 112223333445567777777 999999999987653
No 206
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.15 E-value=7.3e-10 Score=94.69 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=82.2
Q ss_pred HHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhC
Q 038391 29 QIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 29 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.+...+..+++..+|||+|||+|.++..+++.++ +.+++++|+ +.++..+....+++++.+|+.+ +.
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~-~~------- 257 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYP----TIKGVNFDL-PHVISEAPQFPGVTHVGGDMFK-EV------- 257 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CC-------
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCC----CCeEEEecC-HHHHHhhhhcCCeEEEeCCcCC-CC-------
Confidence 3455554466788999999999999999999975 479999999 7787776666789999999875 21
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+. . |+|++.. ..|.... +.....+..+.+ .|||||+|+|..+.-
T Consensus 258 -p~-~-D~v~~~~-----vlh~~~d----~~~~~~L~~~~~------------------~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 258 -PS-G-DTILMKW-----ILHDWSD----QHCATLLKNCYD------------------ALPAHGKVVLVQCIL 301 (364)
T ss_dssp -CC-C-SEEEEES-----CGGGSCH----HHHHHHHHHHHH------------------HSCTTCEEEEEECCB
T ss_pred -CC-C-CEEEehH-----HhccCCH----HHHHHHHHHHHH------------------HcCCCCEEEEEEecc
Confidence 22 2 9999843 2333321 224567777777 999999999876543
No 207
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.15 E-value=7.7e-12 Score=108.11 Aligned_cols=106 Identities=12% Similarity=0.143 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+... .+......+ .......+..++++||+
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~------g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~---~~~~~~~l~~~~~~fD~ 174 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA------GVRHLGFEPSSGVAAKAREK-GIRVRTDFF---EKATADDVRRTEGPANV 174 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT------TCEEEEECCCHHHHHHHHTT-TCCEECSCC---SHHHHHHHHHHHCCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc------CCcEEEECCCHHHHHHHHHc-CCCcceeee---chhhHhhcccCCCCEEE
Confidence 567889999999999999999986 57999999999987653322 222222111 11122222213579999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
|++... ..|..+ ...++..+.+ +|||||+|++...+
T Consensus 175 I~~~~v----l~h~~d-------~~~~l~~~~r------------------~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 175 IYAANT----LCHIPY-------VQSVLEGVDA------------------LLAPDGVFVFEDPY 210 (416)
T ss_dssp EEEESC----GGGCTT-------HHHHHHHHHH------------------HEEEEEEEEEEEEC
T ss_pred EEECCh----HHhcCC-------HHHHHHHHHH------------------HcCCCeEEEEEeCC
Confidence 999532 222222 5678888888 99999999998653
No 208
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.15 E-value=1.7e-11 Score=98.26 Aligned_cols=108 Identities=16% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhh---
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRA--- 106 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~--- 106 (186)
+.++.+|||+|||+|..+..+++.++. +++|+++|+++.++..+ ....+++++++|+..........
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPE---DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccc
Confidence 356889999999999999999999753 57999999999886541 22245889998875421110000
Q ss_pred --h--CCC-C-CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 107 --L--SPK-Q-KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 107 --~--~~~-~-~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
| ..+ + ++||+|+++.. ... ....+..+.+ +|||||+|++..
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~--------~~~------~~~~l~~~~~------------------~L~pgG~lv~~~ 181 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDAD--------KEN------YPNYYPLILK------------------LLKPGGLLIADN 181 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSC--------GGG------HHHHHHHHHH------------------HEEEEEEEEEEC
T ss_pred ccccccccCCCCCcCEEEEeCC--------HHH------HHHHHHHHHH------------------HcCCCeEEEEEc
Confidence 0 001 2 68999999632 111 3356677777 999999999965
No 209
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.15 E-value=1.1e-11 Score=102.37 Aligned_cols=107 Identities=16% Similarity=0.086 Sum_probs=76.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----------CCCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----------HCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----------~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+.+.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+ ....+++++.+|+... +..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~----l~~- 144 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS----VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH----IAK- 144 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT----CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH----HHT-
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC----CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH----Hhh-
Confidence 3568999999999999999998743 47999999999986541 1246899999987642 111
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
..++||+|++|...+........ ...++..+.+ .|||||.|++..-
T Consensus 145 --~~~~fD~Ii~d~~~~~~~~~~l~-------~~~~~~~~~~------------------~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 145 --SENQYDVIMVDSTEPVGPAVNLF-------TKGFYAGIAK------------------ALKEDGIFVAQTD 190 (275)
T ss_dssp --CCSCEEEEEESCSSCCSCCCCCS-------TTHHHHHHHH------------------HEEEEEEEEEECC
T ss_pred --CCCCeeEEEECCCCCCCcchhhh-------HHHHHHHHHH------------------hcCCCcEEEEEcC
Confidence 24689999998753221100000 2356777777 9999999999853
No 210
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.15 E-value=5.8e-11 Score=96.25 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=76.9
Q ss_pred CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhh
Q 038391 35 KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
..++++.+|||+|||+|.++..+++..+ ..+|+|+|+++.++.. +....++++.++|..+...
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~----~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~------ 86 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMGY----CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE------ 86 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTC----EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc------
Confidence 3467899999999999999999999732 3689999999998654 3445679999999876432
Q ss_pred CCCCCCccEEE-eCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 108 SPKQKGFSVIL-SDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 108 ~~~~~~~D~V~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
++.+||+|+ ++|. .++....+..... .|+++|+||++-..+
T Consensus 87 --~~~~~D~IviaGmG--------------g~lI~~IL~~~~~------------------~l~~~~~lIlqp~~~ 128 (230)
T 3lec_A 87 --EADNIDTITICGMG--------------GRLIADILNNDID------------------KLQHVKTLVLQPNNR 128 (230)
T ss_dssp --GGGCCCEEEEEEEC--------------HHHHHHHHHHTGG------------------GGTTCCEEEEEESSC
T ss_pred --cccccCEEEEeCCc--------------hHHHHHHHHHHHH------------------HhCcCCEEEEECCCC
Confidence 123799876 4331 1224456666666 899999999987554
No 211
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.13 E-value=1.3e-10 Score=98.02 Aligned_cols=113 Identities=17% Similarity=0.229 Sum_probs=79.6
Q ss_pred HHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCCh
Q 038391 29 QIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPS 101 (186)
Q Consensus 29 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~ 101 (186)
++...+...+.+.+|||+|||+|.++..+++.++ +.+++++|+ +.++.. .....+++++.+|+.+...
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHP----QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT----TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC----CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 4445544323378999999999999999999875 489999999 777543 1233579999999876531
Q ss_pred hhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 102 NQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 102 ~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
. ..++||+|++.. ..+.... +.....+..+.+ .|||||+|+|...
T Consensus 244 ~-------~~~~~D~v~~~~-----vlh~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 244 F-------EGGAADVVMLND-----CLHYFDA----REAREVIGHAAG------------------LVKPGGALLILTM 288 (352)
T ss_dssp G-------TTCCEEEEEEES-----CGGGSCH----HHHHHHHHHHHH------------------TEEEEEEEEEEEE
T ss_pred c-------CCCCccEEEEec-----ccccCCH----HHHHHHHHHHHH------------------HcCCCCEEEEEEe
Confidence 0 135699999843 2332221 224567777777 9999999998764
No 212
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.13 E-value=1.5e-11 Score=103.38 Aligned_cols=109 Identities=20% Similarity=0.188 Sum_probs=76.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----------CCCCCeEEEEeeecCCChhhHhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----------HCDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----------~~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
+++.+|||+|||+|..+..++++.+ ..+|+++|+++.+++.+ ....+++++.+|+.+... .
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~----~ 147 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT----VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE----R 147 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT----CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH----H
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH----h
Confidence 4568999999999999999998753 47999999999886531 114689999998864311 1
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHH-HHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVEL-GMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
..++||+|++|...+.. ..... ..+ ...++..+.+ .|||||.|++...
T Consensus 148 ---~~~~fD~Ii~d~~~~~~-~~~~~----~~l~~~~~l~~~~~------------------~LkpgG~lv~~~~ 196 (314)
T 1uir_A 148 ---TEERYDVVIIDLTDPVG-EDNPA----RLLYTVEFYRLVKA------------------HLNPGGVMGMQTG 196 (314)
T ss_dssp ---CCCCEEEEEEECCCCBS-TTCGG----GGGSSHHHHHHHHH------------------TEEEEEEEEEEEE
T ss_pred ---cCCCccEEEECCCCccc-ccCcc----hhccHHHHHHHHHH------------------hcCCCcEEEEEcc
Confidence 25689999998753220 00100 001 2467777787 9999999999853
No 213
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.13 E-value=5.9e-11 Score=95.90 Aligned_cols=104 Identities=18% Similarity=0.145 Sum_probs=75.5
Q ss_pred CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhh
Q 038391 35 KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
..++++.+|||+|||+|.++..+++..+ ..+|+++|+++.++.. +....++++.++|..+.-.
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~~----~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~------ 80 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERGQ----IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE------ 80 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTS----EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc------
Confidence 3467899999999999999999999743 3689999999998654 2344579999999754221
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++.+||+|+.. |.. .+.....+..+.. .|+++|+||++-..
T Consensus 81 --~~~~~D~Ivia------G~G-------g~~i~~Il~~~~~------------------~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 81 --ETDQVSVITIA------GMG-------GRLIARILEEGLG------------------KLANVERLILQPNN 121 (225)
T ss_dssp --GGGCCCEEEEE------EEC-------HHHHHHHHHHTGG------------------GCTTCCEEEEEESS
T ss_pred --cCcCCCEEEEc------CCC-------hHHHHHHHHHHHH------------------HhCCCCEEEEECCC
Confidence 12369988751 111 1224466777776 89999999998654
No 214
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.13 E-value=3e-11 Score=96.62 Aligned_cols=100 Identities=19% Similarity=0.200 Sum_probs=71.6
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++++.+|||+|||+|.++..+++..+ .+|+++|+++.++..+ ....++++..+|+... ..
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-----~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~------- 154 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-----TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG-FP------- 154 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-----SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC-CG-------
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-----CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC-CC-------
Confidence 367889999999999999999999852 6899999999886542 1224588888887322 11
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
...+||+|+++... .... ..+.+ .|||||++++.+-...
T Consensus 155 ~~~~fD~Ii~~~~~-----~~~~------------~~~~~------------------~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 155 PKAPYDVIIVTAGA-----PKIP------------EPLIE------------------QLKIGGKLIIPVGSYH 193 (235)
T ss_dssp GGCCEEEEEECSBB-----SSCC------------HHHHH------------------TEEEEEEEEEEECSSS
T ss_pred CCCCccEEEECCcH-----HHHH------------HHHHH------------------hcCCCcEEEEEEecCC
Confidence 12469999996431 1111 13344 8999999999887653
No 215
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=1.1e-10 Score=95.30 Aligned_cols=104 Identities=11% Similarity=0.070 Sum_probs=76.5
Q ss_pred CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhh
Q 038391 35 KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
..++++.+|||+|||+|.++..+++..+ ..+|+|+|+++.++.. +....++++.++|..+...+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~----~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~----- 87 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQT----ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK----- 87 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTTS----EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-----
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-----
Confidence 4468899999999999999999999732 3689999999998654 23445799999997654321
Q ss_pred CCCCCCccEEEe-CCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 108 SPKQKGFSVILS-DMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 108 ~~~~~~~D~V~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+.+||+|+. +|. .++....+..... .|+++|+||++-..+
T Consensus 88 ---~~~~D~IviagmG--------------g~lI~~IL~~~~~------------------~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 88 ---KDAIDTIVIAGMG--------------GTLIRTILEEGAA------------------KLAGVTKLILQPNIA 128 (244)
T ss_dssp ---GGCCCEEEEEEEC--------------HHHHHHHHHHTGG------------------GGTTCCEEEEEESSC
T ss_pred ---cccccEEEEeCCc--------------hHHHHHHHHHHHH------------------HhCCCCEEEEEcCCC
Confidence 236998764 221 1224466666776 899999999987544
No 216
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.12 E-value=3.1e-10 Score=94.79 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=80.0
Q ss_pred HHHHHcCC-CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCC
Q 038391 29 QIQKQYKL-IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLP 100 (186)
Q Consensus 29 ~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~ 100 (186)
.+...+.. .+++.+|||+|||+|.++..+++.++ +.+++++|++ .+++.+ ....+++++.+|+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP----NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT----TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC----CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC
Confidence 44444442 26778999999999999999999874 4799999999 886542 22347999999987643
Q ss_pred hhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 101 SNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 101 ~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
. ...||+|++... .+.... ......+..+.+ .|||||+++|..+
T Consensus 229 ~---------~~~~D~v~~~~~-----l~~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 229 Y---------GNDYDLVLLPNF-----LHHFDV----ATCEQLLRKIKT------------------ALAVEGKVIVFDF 272 (335)
T ss_dssp C---------CSCEEEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEC
T ss_pred C---------CCCCcEEEEcch-----hccCCH----HHHHHHHHHHHH------------------hCCCCcEEEEEee
Confidence 2 235999998432 222211 224567777777 9999999988766
Q ss_pred cC
Q 038391 181 ES 182 (186)
Q Consensus 181 ~~ 182 (186)
..
T Consensus 273 ~~ 274 (335)
T 2r3s_A 273 IP 274 (335)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 217
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.12 E-value=3.5e-11 Score=96.46 Aligned_cols=102 Identities=20% Similarity=0.290 Sum_probs=74.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.++.+|||+|||+|..+..+++.++. +++|+++|+++.++..+ ....+++++.+|+.+. +..+...
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~----l~~l~~~ 143 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPP---DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT----LEQLTQG 143 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCT---TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH----HHHHHTS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH----HHHHHhc
Confidence 46779999999999999999998754 57999999999886542 2234688998887532 2222212
Q ss_pred C--CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 111 Q--KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 111 ~--~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
+ ++||+|+++.. .. .....+..+.+ +|||||++++.
T Consensus 144 ~~~~~fD~V~~d~~--------~~------~~~~~l~~~~~------------------~LkpgG~lv~~ 181 (232)
T 3cbg_A 144 KPLPEFDLIFIDAD--------KR------NYPRYYEIGLN------------------LLRRGGLMVID 181 (232)
T ss_dssp SSCCCEEEEEECSC--------GG------GHHHHHHHHHH------------------TEEEEEEEEEE
T ss_pred CCCCCcCEEEECCC--------HH------HHHHHHHHHHH------------------HcCCCeEEEEe
Confidence 2 68999999752 11 13456777777 99999999985
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.12 E-value=2.9e-11 Score=102.18 Aligned_cols=107 Identities=19% Similarity=0.256 Sum_probs=75.6
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----C------CCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----H------CDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~------~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+++.+|||+|||+|.++..+++..+ ..+|+++|+++.+++.+ . ...+++++++|+.+....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~----- 185 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS----VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----- 185 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH-----
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh-----
Confidence 4568999999999999999998643 47999999999886431 1 146799999987643111
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
..++||+|++|...+. +. ... .....++..+.+ .|||||.+++..-
T Consensus 186 --~~~~fDvIi~d~~~p~-~~--~~~----l~~~~~l~~~~~------------------~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 186 --VTNTYDVIIVDSSDPI-GP--AET----LFNQNFYEKIYN------------------ALKPNGYCVAQCE 231 (321)
T ss_dssp --CCSCEEEEEEECCCSS-SG--GGG----GSSHHHHHHHHH------------------HEEEEEEEEEEEC
T ss_pred --cCCCceEEEECCcCCC-Cc--chh----hhHHHHHHHHHH------------------hcCCCcEEEEEcC
Confidence 2468999999864211 11 000 001467777777 9999999999753
No 219
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.12 E-value=1e-11 Score=103.97 Aligned_cols=106 Identities=17% Similarity=0.162 Sum_probs=74.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----------CCCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----------HCDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----------~~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+++.+|||+|||+|.++..+++..+ ..+|+++|+++.+++.+ ....+++++.+|+.+.... .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~----~ 165 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT----VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ----T 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS----S
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC----CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh----c
Confidence 5678999999999999999998642 47999999999886541 1246799999987643210 0
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHH-HHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVEL-GMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|...+.. . ...+ ...++..+.+ .|||||+|++..
T Consensus 166 --~~~~fDvIi~d~~~~~~----~----~~~l~~~~~l~~~~~------------------~LkpgG~lv~~~ 210 (304)
T 3bwc_A 166 --PDNTYDVVIIDTTDPAG----P----ASKLFGEAFYKDVLR------------------ILKPDGICCNQG 210 (304)
T ss_dssp --CTTCEEEEEEECC-----------------CCHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred --cCCceeEEEECCCCccc----c----chhhhHHHHHHHHHH------------------hcCCCcEEEEec
Confidence 25689999998642111 0 0011 1467778887 999999999974
No 220
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.12 E-value=2e-11 Score=101.04 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=74.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--------C--------CCCCeEEEEeeecCCCh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--------H--------CDARVQTVSADVINLPS 101 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--------~--------~~~~~~~~~~d~~~~~~ 101 (186)
+++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+ . ...+++++.+|+.+.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~----~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~-- 146 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D----VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF-- 146 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C----CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH--
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C----CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH--
Confidence 45789999999999999999987 4 47999999999886431 1 246789999887532
Q ss_pred hhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHH-HHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 102 NQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVEL-GMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 102 ~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+.. .++||+|++|.+.+... . ..+ ...++..+.+ .|+|||.+++..
T Consensus 147 --l~~----~~~fD~Ii~d~~~~~~~---~-----~~l~~~~~l~~~~~------------------~L~pgG~lv~~~ 193 (281)
T 1mjf_A 147 --IKN----NRGFDVIIADSTDPVGP---A-----KVLFSEEFYRYVYD------------------ALNNPGIYVTQA 193 (281)
T ss_dssp --HHH----CCCEEEEEEECCCCC-------------TTSHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred --hcc----cCCeeEEEECCCCCCCc---c-----hhhhHHHHHHHHHH------------------hcCCCcEEEEEc
Confidence 111 35899999987532110 0 111 2467777777 999999999974
No 221
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.11 E-value=8.1e-11 Score=97.11 Aligned_cols=113 Identities=21% Similarity=0.137 Sum_probs=77.5
Q ss_pred CCCEEEEEcccC---ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCCCeEEEEeeecCCChh----hHhhh
Q 038391 39 PGSSVLDLGCAP---GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDARVQTVSADVINLPSN----QVRAL 107 (186)
Q Consensus 39 ~~~~vLDlGcG~---G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~~~~~~~~d~~~~~~~----~l~~~ 107 (186)
...+|||+|||+ |.++..+.+..+ +.+|+++|+|+.|++.+ ....+++++++|+.+.... .+.+.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p----~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP----DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT----TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC----CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhcc
Confidence 347999999999 988877766643 58999999999997652 2235799999998754210 00111
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
. +-.+||+|++... .+..... .....+.++.+ .|||||+|+|..+..+
T Consensus 153 ~-d~~~~d~v~~~~v-----lh~~~d~----~~~~~l~~~~~------------------~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 153 I-DFSRPAAIMLVGM-----LHYLSPD----VVDRVVGAYRD------------------ALAPGSYLFMTSLVDT 200 (274)
T ss_dssp C-CTTSCCEEEETTT-----GGGSCTT----THHHHHHHHHH------------------HSCTTCEEEEEEEBCS
T ss_pred C-CCCCCEEEEEech-----hhhCCcH----HHHHHHHHHHH------------------hCCCCcEEEEEEecCc
Confidence 1 2248999998542 2222110 14467777777 9999999999988753
No 222
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.11 E-value=1.9e-10 Score=100.97 Aligned_cols=105 Identities=18% Similarity=0.153 Sum_probs=72.8
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--------------CC-CCCeEEEEeeecCCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--------------HC-DARVQTVSADVINLP 100 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--------------~~-~~~~~~~~~d~~~~~ 100 (186)
.++++.+|||+|||+|..+..+++..+ ..+|+|||+++.++..+ .. ..+++++++|.....
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g----~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECG----CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN 314 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHC----CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccc
Confidence 367889999999999999999999874 26899999999875422 11 257888887643221
Q ss_pred hhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 101 SNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 101 ~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.. +.. ...+||+|+++.. .+..+ ....+.++.+ .|||||.|++.
T Consensus 315 ~~-~~~---~~~~FDvIvvn~~-----l~~~d-------~~~~L~el~r------------------~LKpGG~lVi~ 358 (433)
T 1u2z_A 315 NR-VAE---LIPQCDVILVNNF-----LFDED-------LNKKVEKILQ------------------TAKVGCKIISL 358 (433)
T ss_dssp HH-HHH---HGGGCSEEEECCT-----TCCHH-------HHHHHHHHHT------------------TCCTTCEEEES
T ss_pred cc-ccc---ccCCCCEEEEeCc-----ccccc-------HHHHHHHHHH------------------hCCCCeEEEEe
Confidence 11 100 1258999998532 11111 3345677777 99999999986
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.11 E-value=3e-11 Score=100.16 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=75.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----C-----CCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----H-----CDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~-----~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+ . ...+++++.+|+.+....
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----- 147 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS----VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----- 147 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH-----
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh-----
Confidence 4578999999999999999997642 47999999999886431 1 146899999987643211
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|...+....... ....++..+.+ .|||||.|++..
T Consensus 148 --~~~~fD~Ii~d~~~~~~~~~~l-------~~~~~l~~~~~------------------~L~pgG~lv~~~ 192 (283)
T 2i7c_A 148 --VTNTYDVIIVDSSDPIGPAETL-------FNQNFYEKIYN------------------ALKPNGYCVAQC 192 (283)
T ss_dssp --CCSCEEEEEEECCCTTTGGGGG-------SSHHHHHHHHH------------------HEEEEEEEEEEC
T ss_pred --CCCCceEEEEcCCCCCCcchhh-------hHHHHHHHHHH------------------hcCCCcEEEEEC
Confidence 2468999999864221110000 01467778887 999999999984
No 224
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.11 E-value=1.3e-10 Score=92.72 Aligned_cols=98 Identities=16% Similarity=0.178 Sum_probs=73.8
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
.++++.+|||+|||+|.++..+++. +.+|+++|+++.++..+ ....++++..+|+.+...
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------- 154 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEV------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV------- 154 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-------
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-------
Confidence 3578899999999999999999998 37999999999986541 223578888888765421
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
++++||+|+++.+ .. ..++..+.+ +|||||++++....
T Consensus 155 -~~~~~D~v~~~~~-------~~---------~~~l~~~~~------------------~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 155 -PEGIFHAAFVDVR-------EP---------WHYLEKVHK------------------SLMEGAPVGFLLPT 192 (248)
T ss_dssp -CTTCBSEEEECSS-------CG---------GGGHHHHHH------------------HBCTTCEEEEEESS
T ss_pred -CCCcccEEEECCc-------CH---------HHHHHHHHH------------------HcCCCCEEEEEeCC
Confidence 2458999999642 11 134555666 99999999998753
No 225
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.11 E-value=1.3e-11 Score=103.64 Aligned_cols=106 Identities=18% Similarity=0.196 Sum_probs=74.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc---------C-CCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL---------H-CDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~---------~-~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+.+.+|||+|||+|..+..++++.+ ..+|+++|+++.+++.+ . ...+++++.+|+.+. +..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~----l~~- 164 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS----VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF----MKQ- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH----HHT-
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH----Hhh-
Confidence 4568999999999999999998743 47999999999986541 1 246899999987542 111
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|.+.+.... .......++..+.+ +|||||.|++..
T Consensus 165 --~~~~fD~Ii~d~~~~~~~~-------~~l~~~~~l~~~~~------------------~LkpgG~lv~~~ 209 (304)
T 2o07_A 165 --NQDAFDVIITDSSDPMGPA-------ESLFKESYYQLMKT------------------ALKEDGVLCCQG 209 (304)
T ss_dssp --CSSCEEEEEEECC------------------CHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred --CCCCceEEEECCCCCCCcc-------hhhhHHHHHHHHHh------------------ccCCCeEEEEec
Confidence 2468999999864211100 00113467777777 999999999876
No 226
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.11 E-value=1.4e-09 Score=91.98 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=77.8
Q ss_pred HHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCChhhH
Q 038391 29 QIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 29 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~~~l 104 (186)
.+...+. ++++.+|||+|||+|.++..+++.++ +.+++++|+++..... .....+++++.+|+....
T Consensus 175 ~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p----~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---- 245 (348)
T 3lst_A 175 ILARAGD-FPATGTVADVGGGRGGFLLTVLREHP----GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREV---- 245 (348)
T ss_dssp HHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCT----TEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCC----
T ss_pred HHHHhCC-ccCCceEEEECCccCHHHHHHHHHCC----CCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCC----
Confidence 3444443 56788999999999999999999875 4799999995433311 233457999999986221
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+ +||+|++.. ..|.... ......+.++.+ .|||||+|+|..+.
T Consensus 246 -----p--~~D~v~~~~-----vlh~~~d----~~~~~~L~~~~~------------------~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 246 -----P--HADVHVLKR-----ILHNWGD----EDSVRILTNCRR------------------VMPAHGRVLVIDAV 288 (348)
T ss_dssp -----C--CCSEEEEES-----CGGGSCH----HHHHHHHHHHHH------------------TCCTTCEEEEEECC
T ss_pred -----C--CCcEEEEeh-----hccCCCH----HHHHHHHHHHHH------------------hcCCCCEEEEEEec
Confidence 3 899999843 2333322 223567778887 99999999987654
No 227
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.10 E-value=2e-11 Score=103.82 Aligned_cols=107 Identities=17% Similarity=0.250 Sum_probs=75.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----------CCCCeEEEEeeecCCChhhHhh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----------CDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----------~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
.+++.+|||+|||+|..+..+++..+ ..+|+++|+++.++..++ ...+++++++|+... +..
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~----~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~----l~~ 189 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS----IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF----LKN 189 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH----HHT
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH----HHh
Confidence 35678999999999999999998743 479999999999865411 145899999987542 111
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
+ +.++||+|++|...+.. .... .....++..+.+ .|||||.|++.
T Consensus 190 ~--~~~~fDlIi~d~~~p~~---~~~~----l~~~~~l~~~~~------------------~LkpgG~lv~~ 234 (334)
T 1xj5_A 190 A--AEGSYDAVIVDSSDPIG---PAKE----LFEKPFFQSVAR------------------ALRPGGVVCTQ 234 (334)
T ss_dssp S--CTTCEEEEEECCCCTTS---GGGG----GGSHHHHHHHHH------------------HEEEEEEEEEE
T ss_pred c--cCCCccEEEECCCCccC---cchh----hhHHHHHHHHHH------------------hcCCCcEEEEe
Confidence 1 24689999998642111 1110 012467777787 99999999996
No 228
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.10 E-value=5.6e-10 Score=94.66 Aligned_cols=110 Identities=12% Similarity=0.158 Sum_probs=79.8
Q ss_pred HHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCCh
Q 038391 29 QIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPS 101 (186)
Q Consensus 29 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~ 101 (186)
.+...+. ++++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+ ....+++++.+|+.+.+.
T Consensus 181 ~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 181 LLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFP----ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCT----TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC
T ss_pred HHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCC----CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC
Confidence 3444443 56788999999999999999999874 479999999 9887542 234569999999876532
Q ss_pred hhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 102 NQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 102 ~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..+|+|++... .+... .+.....+..+.+ .|||||+++|..+.
T Consensus 255 ----------~~~D~v~~~~v-----lh~~~----d~~~~~~l~~~~~------------------~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 255 ----------PEADAVLFCRI-----LYSAN----EQLSTIMCKKAFD------------------AMRSGGRLLILDMV 297 (359)
T ss_dssp ----------CCCSEEEEESC-----GGGSC----HHHHHHHHHHHHT------------------TCCTTCEEEEEEEC
T ss_pred ----------CCCCEEEEech-----hccCC----HHHHHHHHHHHHH------------------hcCCCCEEEEEecc
Confidence 13499998432 22222 1235677888888 99999999876644
No 229
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=1.4e-10 Score=95.76 Aligned_cols=119 Identities=21% Similarity=0.186 Sum_probs=74.3
Q ss_pred HHhHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeC-CCCCCCCc---------CCC-------
Q 038391 24 AFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDV-KKVKVPSL---------HCD------- 86 (186)
Q Consensus 24 ~~~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDi-s~~~i~~~---------~~~------- 86 (186)
...+.+.+.......++.+|||+|||+|.++..+++. + ..+|+|+|+ ++.++..+ ...
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~----~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G----ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T----CSEEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C----CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 3345555555444467889999999999999988875 2 249999999 78885431 110
Q ss_pred CCeEEEEeeecCCChhhHhhhCCCCCCccEEEe-CCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCC
Q 038391 87 ARVQTVSADVINLPSNQVRALSPKQKGFSVILS-DMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTD 165 (186)
Q Consensus 87 ~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (186)
.++++...+..+........+ ..++||+|++ +. .+.... ...++..+.+
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~--~~~~fD~Ii~~dv------l~~~~~------~~~ll~~l~~---------------- 188 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCT--GLQRFQVVLLADL------LSFHQA------HDALLRSVKM---------------- 188 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHH--SCSSBSEEEEESC------CSCGGG------HHHHHHHHHH----------------
T ss_pred CCeEEEEecCCCccHHHHhhc--cCCCCCEEEEeCc------ccChHH------HHHHHHHHHH----------------
Confidence 256666555544322211111 2468999987 32 222211 4456667776
Q ss_pred Ccccc---c--CcEEEEEE
Q 038391 166 SGVLK---P--GGHLVIKL 179 (186)
Q Consensus 166 ~~~Lk---p--gG~lvi~~ 179 (186)
+|| | ||++++..
T Consensus 189 --~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 189 --LLALPANDPTAVALVTF 205 (281)
T ss_dssp --HBCCTTTCTTCEEEEEE
T ss_pred --HhcccCCCCCCEEEEEE
Confidence 889 9 99877643
No 230
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.10 E-value=1.6e-12 Score=105.26 Aligned_cols=73 Identities=14% Similarity=0.253 Sum_probs=57.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC----CCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC----DARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~----~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++..... ..+++++++|+.+.+.. .++
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~------~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~-------~~~ 93 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKI------SKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFP-------NKQ 93 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHH------SSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCC-------CSS
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHh------CCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcc-------cCC
Confidence 567889999999999999999998 4799999999999876332 35788889998766421 135
Q ss_pred CccEEEeCCCC
Q 038391 113 GFSVILSDMCP 123 (186)
Q Consensus 113 ~~D~V~~d~~~ 123 (186)
+| .|++|.+.
T Consensus 94 ~f-~vv~n~Py 103 (245)
T 1yub_A 94 RY-KIVGNIPY 103 (245)
T ss_dssp EE-EEEEECCS
T ss_pred Cc-EEEEeCCc
Confidence 78 78888763
No 231
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.08 E-value=7.7e-11 Score=110.21 Aligned_cols=106 Identities=12% Similarity=0.213 Sum_probs=77.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------------CCCCeEEEEeeecCCChhhHh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------------CDARVQTVSADVINLPSNQVR 105 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------------~~~~~~~~~~d~~~~~~~~l~ 105 (186)
.++.+|||+|||+|.++..+++..++ ..+|+|+|+++.|+..+. ...+++++++|+.+++..
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p---~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~--- 793 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTS---LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR--- 793 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCC---CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT---
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCC---CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc---
Confidence 47889999999999999999987422 369999999999975521 235799999999876542
Q ss_pred hhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 106 ALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.++||+|++.. ..+.... .....++..+.+ +|||| .++|.+.+.
T Consensus 794 -----d~sFDlVV~~e-----VLeHL~d----p~l~~~L~eI~R------------------vLKPG-~LIISTPN~ 837 (950)
T 3htx_A 794 -----LHDVDIGTCLE-----VIEHMEE----DQACEFGEKVLS------------------LFHPK-LLIVSTPNY 837 (950)
T ss_dssp -----SCSCCEEEEES-----CGGGSCH----HHHHHHHHHHHH------------------TTCCS-EEEEEECBG
T ss_pred -----cCCeeEEEEeC-----chhhCCh----HHHHHHHHHHHH------------------HcCCC-EEEEEecCc
Confidence 57899999943 1222221 223356777777 99999 888887543
No 232
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.08 E-value=9.7e-10 Score=92.04 Aligned_cols=108 Identities=17% Similarity=0.171 Sum_probs=78.1
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-------CCCCeEEEEeeecCCChh
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-------CDARVQTVSADVINLPSN 102 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-------~~~~~~~~~~d~~~~~~~ 102 (186)
+...+. +++ .+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+. ...+++++.+|+.+. .
T Consensus 160 ~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~- 230 (334)
T 2ip2_A 160 IPRLLD-FRG-RSFVDVGGGSGELTKAILQAEP----SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE-V- 230 (334)
T ss_dssp HHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCT----TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC-C-
T ss_pred HHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCC----CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC-C-
Confidence 444443 445 8999999999999999999874 479999999 99876521 235799999998652 1
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..+||+|++.. ..+.... ......+..+.+ .|||||+|+|....
T Consensus 231 --------~~~~D~v~~~~-----vl~~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 231 --------PSNGDIYLLSR-----IIGDLDE----AASLRLLGNCRE------------------AMAGDGRVVVIERT 274 (334)
T ss_dssp --------CSSCSEEEEES-----CGGGCCH----HHHHHHHHHHHH------------------HSCTTCEEEEEECC
T ss_pred --------CCCCCEEEEch-----hccCCCH----HHHHHHHHHHHH------------------hcCCCCEEEEEEec
Confidence 25799999843 2332221 223467777777 99999999988654
No 233
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.08 E-value=1.7e-10 Score=102.55 Aligned_cols=100 Identities=20% Similarity=0.283 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
..++.+|||+|||+|.++..+++. + ..+|+|+|+++ ++.. .....+++++++|+.+...
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~----~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~-------- 221 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-G----ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------- 221 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-T----CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--------
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-C----CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc--------
Confidence 356789999999999999998885 2 46999999998 7533 2334689999999876531
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
.++||+|+++.. +.+... +.....+..+.+ .|||||.+++.
T Consensus 222 -~~~fD~Ivs~~~----~~~~~~-----e~~~~~l~~~~~------------------~LkpgG~li~~ 262 (480)
T 3b3j_A 222 -PEQVDIIISEPM----GYMLFN-----ERMLESYLHAKK------------------YLKPSGNMFPT 262 (480)
T ss_dssp -SSCEEEEECCCC----HHHHTC-----HHHHHHHHHGGG------------------GEEEEEEEESC
T ss_pred -CCCeEEEEEeCc----hHhcCc-----HHHHHHHHHHHH------------------hcCCCCEEEEE
Confidence 358999999542 111111 112334456666 99999999854
No 234
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.08 E-value=2.9e-10 Score=96.27 Aligned_cols=103 Identities=14% Similarity=0.166 Sum_probs=77.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
++++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+....+++++.+|+.. +. + .||+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~--------p--~~D~ 249 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP----KLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SI--------P--NADA 249 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CC--------C--CCSE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC----CCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CC--------C--CccE
Confidence 45678999999999999999999875 479999999 8888775544669999998864 21 2 3999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCccccc---CcEEEEEEccC
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKP---GGHLVIKLLES 182 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkp---gG~lvi~~~~~ 182 (186)
|++.. ..|.... ......+..+.+ .||| ||+++|..+..
T Consensus 250 v~~~~-----~lh~~~d----~~~~~~l~~~~~------------------~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 250 VLLKY-----ILHNWTD----KDCLRILKKCKE------------------AVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp EEEES-----CGGGSCH----HHHHHHHHHHHH------------------HHSGGGCCCEEEEEECEE
T ss_pred EEeeh-----hhccCCH----HHHHHHHHHHHH------------------hCCCCCCCcEEEEEEeec
Confidence 99843 2332221 123467777777 9999 99999876543
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.07 E-value=4.1e-11 Score=103.51 Aligned_cols=116 Identities=19% Similarity=0.122 Sum_probs=77.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CC-CCCeEEEEeeecCCChhhHhhhCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HC-DARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~-~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.+ .. ..+++++++|+.+... .+..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-----~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~----~~~~ 289 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-----CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLR----TYRD 289 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHH----HHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHH----HHHh
Confidence 478899999999999999999861 36999999999987541 22 2378999999865421 1111
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.+.+||+|++|++.......... .........+..+.+ .|+|||++++..-..
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~~--~~~~~~~~~l~~~~~------------------~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQLM--GACRGYKDINMLAIQ------------------LLNEGGILLTFSCSG 342 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSSS--CCCTHHHHHHHHHHH------------------TEEEEEEEEEEECCT
T ss_pred cCCCCCEEEECCCCCCCChhHHH--HHHHHHHHHHHHHHH------------------hcCCCcEEEEEeCCC
Confidence 14689999999763221111000 001124456666666 999999999977543
No 236
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.07 E-value=1.3e-10 Score=99.83 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.+++.+|||+|||+|.++..++.... .++|+|+|+++.++..+ ....++++.++|+.+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~----~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~-------- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY----SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ-------- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC----CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG--------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC----CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc--------
Confidence 57889999999999999999998742 25999999999997552 223578999999887643
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALG 149 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (186)
+.++||+|++|++... ..........+...++..+.+
T Consensus 283 ~~~~fD~Ii~npPyg~---r~~~~~~~~~ly~~~~~~l~r 319 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGL---KIGKKSMIPDLYMKFFNELAK 319 (373)
T ss_dssp TCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHH
T ss_pred ccCCcCEEEECCCCCc---ccCcchhHHHHHHHHHHHHHH
Confidence 2478999999986322 111111122344567777776
No 237
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.07 E-value=3e-10 Score=95.26 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=76.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++..+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+ ....++++..+|+... . +
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--------p 233 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHE----DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP-L--------P 233 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C--------C
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCC----CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC-C--------C
Confidence 4568999999999999999999875 479999999 8886542 2346899999998632 1 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
. +||+|++.. ..+.... +.....+..+.+ .|||||+|+|....
T Consensus 234 ~-~~D~v~~~~-----vlh~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 234 A-GAGGYVLSA-----VLHDWDD----LSAVAILRRCAE------------------AAGSGGVVLVIEAV 276 (332)
T ss_dssp C-SCSEEEEES-----CGGGSCH----HHHHHHHHHHHH------------------HHTTTCEEEEEECC
T ss_pred C-CCcEEEEeh-----hhccCCH----HHHHHHHHHHHH------------------hcCCCCEEEEEeec
Confidence 3 899999843 2333322 224567777777 99999999987654
No 238
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.07 E-value=1e-09 Score=93.80 Aligned_cols=110 Identities=14% Similarity=0.168 Sum_probs=79.7
Q ss_pred HHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChh
Q 038391 30 IQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSN 102 (186)
Q Consensus 30 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~ 102 (186)
+...+. ++++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+ ....++++..+|+... .
T Consensus 194 l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~- 265 (369)
T 3gwz_A 194 VAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFP----GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET-I- 265 (369)
T ss_dssp HHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC-C-
T ss_pred HHHhCC-CccCcEEEEeCCCccHHHHHHHHHCC----CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC-C-
Confidence 444443 56678999999999999999999874 479999999 8876542 2356899999998732 1
Q ss_pred hHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 103 QVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 103 ~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+. +||+|++.. ..+.... ......+..+.+ .|||||+|+|....-
T Consensus 266 -------p~-~~D~v~~~~-----vlh~~~d----~~~~~~L~~~~~------------------~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 266 -------PD-GADVYLIKH-----VLHDWDD----DDVVRILRRIAT------------------AMKPDSRLLVIDNLI 310 (369)
T ss_dssp -------CS-SCSEEEEES-----CGGGSCH----HHHHHHHHHHHT------------------TCCTTCEEEEEEEBC
T ss_pred -------CC-CceEEEhhh-----hhccCCH----HHHHHHHHHHHH------------------HcCCCCEEEEEEecc
Confidence 23 899999843 2333322 223467788887 999999999876543
No 239
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.06 E-value=4.3e-10 Score=95.91 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=75.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
....+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+ ....+++++.+|+.+...+ .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-------~ 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK----EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-------F 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST----TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-------C
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC----CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-------C
Confidence 4567999999999999999999875 579999999 8776441 2235799999998764200 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.++||+|++... .+.... +.....+..+.+ .|||||+|+|...
T Consensus 246 p~~~D~v~~~~v-----lh~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 246 PTGFDAVWMSQF-----LDCFSE----EEVISILTRVAQ------------------SIGKDSKVYIMET 288 (363)
T ss_dssp CCCCSEEEEESC-----STTSCH----HHHHHHHHHHHH------------------HCCTTCEEEEEEC
T ss_pred CCCcCEEEEech-----hhhCCH----HHHHHHHHHHHH------------------hcCCCcEEEEEee
Confidence 258999998432 332221 224466777777 9999999988654
No 240
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.06 E-value=4.9e-11 Score=100.60 Aligned_cols=105 Identities=18% Similarity=0.231 Sum_probs=72.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc---------C-CCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL---------H-CDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~---------~-~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+.+.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+ . ...+++++.+|+.... ..
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l----~~- 177 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES----VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFL----KN- 177 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT----CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHH----HH-
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHH----Hh-
Confidence 4568999999999999999998743 47999999999886431 1 1467899988875421 11
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHH-HHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVEL-GMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|...+.. . ...+ ...++..+.+ .|+|||.|++..
T Consensus 178 --~~~~fD~Ii~d~~~~~~----~----~~~l~t~~~l~~~~~------------------~LkpgG~lv~~~ 222 (314)
T 2b2c_A 178 --HKNEFDVIITDSSDPVG----P----AESLFGQSYYELLRD------------------ALKEDGILSSQG 222 (314)
T ss_dssp --CTTCEEEEEECCC---------------------HHHHHHH------------------HEEEEEEEEEEC
T ss_pred --cCCCceEEEEcCCCCCC----c----chhhhHHHHHHHHHh------------------hcCCCeEEEEEC
Confidence 25689999998631110 0 0111 2577788887 999999999975
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.03 E-value=1.2e-10 Score=98.67 Aligned_cols=95 Identities=14% Similarity=0.257 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++.. ++. +.+|+|+|+++.++.. +....+++++++|+.+..
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------- 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------- 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------
T ss_pred cCCCCEEEEccCccCHHHHh-ccC------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------
Confidence 46889999999999999999 762 4799999999988654 223357999999987552
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
++||+|++|++... ..++..+.+ +|+|||.+++..+..
T Consensus 257 --~~fD~Vi~dpP~~~---------------~~~l~~~~~------------------~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 257 --VKGNRVIMNLPKFA---------------HKFIDKALD------------------IVEEGGVIHYYTIGK 294 (336)
T ss_dssp --CCEEEEEECCTTTG---------------GGGHHHHHH------------------HEEEEEEEEEEEEES
T ss_pred --CCCcEEEECCcHhH---------------HHHHHHHHH------------------HcCCCCEEEEEEeec
Confidence 58999999864211 135555566 899999999877654
No 242
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.01 E-value=6.9e-10 Score=94.23 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=75.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++.++ +.+++++|+ +.++..+ ....+++++++|+.+..
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------- 245 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP----HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--------- 245 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC----CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---------
Confidence 56788999999999999999999874 479999999 8886541 23347999999986521
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+ ..||+|++... .+.... ......+..+.+ .|||||+|+|..+
T Consensus 246 ~-~~~D~v~~~~v-----l~~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 P-VTADVVLLSFV-----LLNWSD----EDALTILRGCVR------------------ALEPGGRLLVLDR 288 (374)
T ss_dssp S-CCEEEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------HEEEEEEEEEEEC
T ss_pred C-CCCCEEEEecc-----ccCCCH----HHHHHHHHHHHH------------------hcCCCcEEEEEec
Confidence 1 24999998532 222221 123467777777 9999999998766
No 243
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.01 E-value=7e-10 Score=86.38 Aligned_cols=72 Identities=21% Similarity=0.238 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
..++.+|||+|||+|.++..+++. + ..+|+|+|+++.++..+. ...+++++++|+.+++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----------- 110 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLL-G----AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN----------- 110 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC-----------
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC-----------
Confidence 456889999999999999999987 2 358999999999865411 1117899999887642
Q ss_pred CCccEEEeCCCCC
Q 038391 112 KGFSVILSDMCPS 124 (186)
Q Consensus 112 ~~~D~V~~d~~~~ 124 (186)
.+||+|++|++..
T Consensus 111 ~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 111 SRVDIVIMNPPFG 123 (207)
T ss_dssp CCCSEEEECCCCS
T ss_pred CCCCEEEEcCCCc
Confidence 3899999998643
No 244
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.00 E-value=1.5e-09 Score=91.82 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=75.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++..+ +.+++++|+ +.+++.+ ....+++++.+|+.+..
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------- 246 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP----HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL--------- 246 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC----CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---------
Confidence 56788999999999999999999864 479999999 8886541 23347999999986421
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
...||+|++... .+.... ......+..+.+ .|||||+++|..+.
T Consensus 247 -~~~~D~v~~~~v-----l~~~~~----~~~~~~l~~~~~------------------~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 -PRKADAIILSFV-----LLNWPD----HDAVRILTRCAE------------------ALEPGGRILIHERD 290 (360)
T ss_dssp -SSCEEEEEEESC-----GGGSCH----HHHHHHHHHHHH------------------TEEEEEEEEEEECC
T ss_pred -CCCccEEEEccc-----ccCCCH----HHHHHHHHHHHH------------------hcCCCcEEEEEEEe
Confidence 235999998432 222221 123467777777 99999999987654
No 245
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.99 E-value=7e-10 Score=95.12 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=74.2
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecC-CChhhHhhhCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVIN-LPSNQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~-~~~~~l~~~~~~ 110 (186)
.++.+|||+| |+|.++..++...+ ..+|+|+|+++.+++.++ ...+++++++|+.+ ++.. .
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~----~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~-------~ 238 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGL----PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY-------A 238 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTC----CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT-------T
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh-------c
Confidence 3578999999 99999999988732 379999999999975421 11279999999876 3311 1
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcE-EEEEEcc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGH-LVIKLLE 181 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~-lvi~~~~ 181 (186)
.++||+|++|+++... . ...++..+.+ .|||||+ +++.+.+
T Consensus 239 ~~~fD~Vi~~~p~~~~-----------~-~~~~l~~~~~------------------~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 239 LHKFDTFITDPPETLE-----------A-IRAFVGRGIA------------------TLKGPRCAGYFGITR 280 (373)
T ss_dssp SSCBSEEEECCCSSHH-----------H-HHHHHHHHHH------------------TBCSTTCEEEEEECT
T ss_pred cCCccEEEECCCCchH-----------H-HHHHHHHHHH------------------HcccCCeEEEEEEec
Confidence 3589999998753211 1 3567777887 9999995 4666554
No 246
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.98 E-value=2.6e-10 Score=96.53 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=74.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCC-CCCCeEEEEeCCCCCCCCcC-----CCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPL-DNGGSVVGIDVKKVKVPSLH-----CDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~-~~~~~v~gvDis~~~i~~~~-----~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.+++.+|||+|||+|.++..+++.++.. +...+|+|+|+++.++..+. ...++.+.++|..... .
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~---------~ 198 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL---------L 198 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC---------C
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc---------c
Confidence 3467899999999999999999887420 00168999999998864411 1125788888876532 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHH----------HHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAAL----------SVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..+||+|++|++... +..+... .......++..+.+ .|||||++++.+
T Consensus 199 ~~~fD~Ii~NPPfg~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~------------------~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 199 VDPVDVVISDLPVGY---YPDDENAKTFELCREEGHSFAHFLFIEQGMR------------------YTKPGGYLFFLV 256 (344)
T ss_dssp CCCEEEEEEECCCSE---ESCHHHHTTSTTCCSSSCEEHHHHHHHHHHH------------------TEEEEEEEEEEE
T ss_pred cCCccEEEECCCCCC---cCchhhhhhccccCCCCcchHHHHHHHHHHH------------------HhCCCCEEEEEE
Confidence 468999999986321 1110000 00011246666666 999999999887
No 247
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.97 E-value=5.9e-10 Score=86.59 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-CCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC-DARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~-~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
..++.+|||+|||+|.++..+++. + ..+|+|+|+++.++..+.. ..+++++++|+.+++ ++||
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~-----------~~~D 112 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-G----AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS-----------GKYD 112 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-T----BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC-----------CCEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC-----------CCee
Confidence 456889999999999999999987 2 3589999999999765221 117899999887542 5899
Q ss_pred EEEeCCC
Q 038391 116 VILSDMC 122 (186)
Q Consensus 116 ~V~~d~~ 122 (186)
+|++|++
T Consensus 113 ~v~~~~p 119 (200)
T 1ne2_A 113 TWIMNPP 119 (200)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999875
No 248
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.97 E-value=3.7e-10 Score=101.95 Aligned_cols=70 Identities=23% Similarity=0.388 Sum_probs=54.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
..+.+|||+|||.|.++..+++. |.+|+|||+++.+|..+ ....+++|.++++.++... . ..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~----~--~~ 132 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA----L--EE 132 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH----C--CT
T ss_pred CCCCeEEEECCCCcHHHHHHHhC------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh----c--cC
Confidence 45679999999999999999997 78999999999997652 1123688888877544211 1 35
Q ss_pred CCccEEEe
Q 038391 112 KGFSVILS 119 (186)
Q Consensus 112 ~~~D~V~~ 119 (186)
++||+|+|
T Consensus 133 ~~fD~v~~ 140 (569)
T 4azs_A 133 GEFDLAIG 140 (569)
T ss_dssp TSCSEEEE
T ss_pred CCccEEEE
Confidence 78999999
No 249
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.96 E-value=1.9e-09 Score=89.52 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=72.4
Q ss_pred CEEEEEcccC--ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCCh----hhHhhhC
Q 038391 41 SSVLDLGCAP--GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPS----NQVRALS 108 (186)
Q Consensus 41 ~~vLDlGcG~--G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~----~~l~~~~ 108 (186)
.+|||||||+ +..+..+++...+ +.+|+++|.|+.|+..++ ...+++++++|+.++.. ....+..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P---~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAP---ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCT---TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCC---CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 6999999997 5566666665433 689999999999986531 12469999999986521 1111111
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCC
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQ 183 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~ 183 (186)
..+..+ .|+++. ..+|..+.. .....+....+ .|+|||+|++..+..+
T Consensus 157 D~~~p~-av~~~a----vLH~l~d~~----~p~~~l~~l~~------------------~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 157 DLTRPV-ALTVIA----IVHFVLDED----DAVGIVRRLLE------------------PLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CTTSCC-EEEEES----CGGGSCGGG----CHHHHHHHHHT------------------TSCTTCEEEEEEECCT
T ss_pred CcCCcc-hHHhhh----hHhcCCchh----hHHHHHHHHHH------------------hCCCCcEEEEEeccCC
Confidence 112233 455543 233333321 12456777777 9999999999998765
No 250
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.96 E-value=1.9e-09 Score=91.52 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=75.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
++++.+|||+|||+|.++..+++.++ +.+++++|+ +.+++.+....+++++.+|+.. +. + +||+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~--------~--~~D~ 254 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP----HLKCTVFDQ-PQVVGNLTGNENLNFVGGDMFK-SI--------P--SADA 254 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT----TSEEEEEEC-HHHHSSCCCCSSEEEEECCTTT-CC--------C--CCSE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC----CCeEEEecc-HHHHhhcccCCCcEEEeCccCC-CC--------C--CceE
Confidence 45678999999999999999999975 479999999 6777665545679999998865 21 2 4999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCccccc---CcEEEEEEcc
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKP---GGHLVIKLLE 181 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkp---gG~lvi~~~~ 181 (186)
|++... .|.... ......+..+.+ .||| ||+++|..+.
T Consensus 255 v~~~~v-----lh~~~d----~~~~~~l~~~~~------------------~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 255 VLLKWV-----LHDWND----EQSLKILKNSKE------------------AISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EEEESC-----GGGSCH----HHHHHHHHHHHH------------------HTGGGGGGCEEEEEECE
T ss_pred EEEccc-----ccCCCH----HHHHHHHHHHHH------------------hCCCCCCCcEEEEEEec
Confidence 998432 332221 123467777777 9999 9999987654
No 251
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.95 E-value=3.2e-10 Score=94.69 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++... ....+++++++|+...+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~---------- 103 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPL------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV---------- 103 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTT------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC----------
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC----------
Confidence 577889999999999999999986 47999999999997541 12257899999987653
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
..+||+|++|.+
T Consensus 104 ~~~~D~Vv~n~p 115 (299)
T 2h1r_A 104 FPKFDVCTANIP 115 (299)
T ss_dssp CCCCSEEEEECC
T ss_pred cccCCEEEEcCC
Confidence 237999999875
No 252
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.94 E-value=5.9e-10 Score=91.63 Aligned_cols=91 Identities=11% Similarity=-0.032 Sum_probs=69.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----------CCCCeEEEEeeecCCChhhHhhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----------CDARVQTVSADVINLPSNQVRAL 107 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----------~~~~~~~~~~d~~~~~~~~l~~~ 107 (186)
+.+.+|||+|||+|..+..+++. + .+|+++|+++.+++.++ ...+++++.+|.....
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-----~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-----THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-----CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-------
Confidence 45679999999999999998886 2 69999999998865422 1357888888876542
Q ss_pred CCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 108 SPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 108 ~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
++||+|++|.. ... .++..+.+ .|||||.|++..
T Consensus 138 ----~~fD~Ii~d~~-------dp~---------~~~~~~~~------------------~L~pgG~lv~~~ 171 (262)
T 2cmg_A 138 ----KKYDLIFCLQE-------PDI---------HRIDGLKR------------------MLKEDGVFISVA 171 (262)
T ss_dssp ----CCEEEEEESSC-------CCH---------HHHHHHHT------------------TEEEEEEEEEEE
T ss_pred ----hhCCEEEECCC-------ChH---------HHHHHHHH------------------hcCCCcEEEEEc
Confidence 58999999742 111 26777887 999999999974
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.93 E-value=1.1e-09 Score=91.75 Aligned_cols=74 Identities=15% Similarity=0.269 Sum_probs=60.7
Q ss_pred CCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----CCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 35 KLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----CDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
..++++.+|||+|||+|.+|..+++. +.+|+|||+++.+++... ...+++++++|+.+....
T Consensus 46 l~~~~~~~VLEIG~G~G~lT~~La~~------~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~-------- 111 (295)
T 3gru_A 46 ANLTKDDVVLEIGLGKGILTEELAKN------AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLN-------- 111 (295)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGG--------
T ss_pred cCCCCcCEEEEECCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcc--------
Confidence 34678899999999999999999998 479999999999976521 236899999999876543
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
..+||.|++|.+
T Consensus 112 ~~~fD~Iv~NlP 123 (295)
T 3gru_A 112 KLDFNKVVANLP 123 (295)
T ss_dssp GSCCSEEEEECC
T ss_pred cCCccEEEEeCc
Confidence 347999999875
No 254
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.91 E-value=1.8e-09 Score=89.36 Aligned_cols=73 Identities=19% Similarity=0.217 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC---cCCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS---LHCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~---~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
++++ +|||+|||+|.+|..+++. +.+|+|+|+++.+++. .....+++++++|+.+.+... ...
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~------~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~-------~~~ 110 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEA------GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEE-------VPQ 110 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHT------TCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGG-------SCT
T ss_pred CCCC-eEEEEeCchHHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhh-------ccC
Confidence 6778 9999999999999999997 4799999999999754 122358999999998876432 136
Q ss_pred ccEEEeCCCC
Q 038391 114 FSVILSDMCP 123 (186)
Q Consensus 114 ~D~V~~d~~~ 123 (186)
+|.|++|.+.
T Consensus 111 ~~~iv~NlPy 120 (271)
T 3fut_A 111 GSLLVANLPY 120 (271)
T ss_dssp TEEEEEEECS
T ss_pred ccEEEecCcc
Confidence 8999998763
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.89 E-value=3.2e-09 Score=92.96 Aligned_cols=69 Identities=19% Similarity=0.247 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC------CCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH------CDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~------~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+. ... ++++++|+.+..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~------~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~---------- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR------GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS---------- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC----------
T ss_pred cCCCCEEEEeeccchHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC----------
Confidence 467889999999999999999986 479999999999976521 112 889999887653
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
..+||+|++|++
T Consensus 351 ~~~fD~Vv~dPP 362 (425)
T 2jjq_A 351 VKGFDTVIVDPP 362 (425)
T ss_dssp CTTCSEEEECCC
T ss_pred ccCCCEEEEcCC
Confidence 127999999875
No 256
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.87 E-value=3.5e-09 Score=92.59 Aligned_cols=76 Identities=22% Similarity=0.265 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
+.++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.+ ....+++|+++|+.+.... +...
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~------~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~----~~~~ 353 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ------AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK----QPWA 353 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS----SGGG
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh----hhhh
Confidence 567889999999999999999987 47999999999997542 2224799999998763211 0002
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
.++||+|++|++
T Consensus 354 ~~~fD~Vv~dPP 365 (433)
T 1uwv_A 354 KNGFDKVLLDPA 365 (433)
T ss_dssp TTCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 468999999875
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.86 E-value=2e-09 Score=94.39 Aligned_cols=117 Identities=19% Similarity=0.217 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCC---------CCCeEEEEeCCCCCCCCc-------CCC-CCeEEEEeeecCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLD---------NGGSVVGIDVKKVKVPSL-------HCD-ARVQTVSADVINL 99 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~---------~~~~v~gvDis~~~i~~~-------~~~-~~~~~~~~d~~~~ 99 (186)
..++.+|||.|||+|+++..+++.+.... ...+++|+|+++.++..+ ... .+.++.++|....
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 46678999999999999999998752100 026899999999885431 111 1577888887654
Q ss_pred ChhhHhhhCCCCCCccEEEeCCCCCCCCCcccc----h--HHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCc
Q 038391 100 PSNQVRALSPKQKGFSVILSDMCPSVSGITTKD----A--ALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGG 173 (186)
Q Consensus 100 ~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG 173 (186)
. ...+||+|++|++.......... . .........++..+.+ .|||||
T Consensus 249 ~---------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~------------------~Lk~gG 301 (445)
T 2okc_A 249 E---------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMML------------------MLKTGG 301 (445)
T ss_dssp C---------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHH------------------HEEEEE
T ss_pred c---------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHH------------------HhccCC
Confidence 3 23489999999764332111000 0 0000012356666666 999999
Q ss_pred EEEEEEc
Q 038391 174 HLVIKLL 180 (186)
Q Consensus 174 ~lvi~~~ 180 (186)
++++.+-
T Consensus 302 ~~a~V~p 308 (445)
T 2okc_A 302 RAAVVLP 308 (445)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 9998774
No 258
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.84 E-value=1.9e-10 Score=90.94 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=50.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+++..+|||+|||+|-++..++...+ +.+|+++|+++.|++.. ....++++ .|.... .
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p----~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~--~------- 111 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENE----KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD--V------- 111 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSC----CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH--H-------
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCC----CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc--C-------
Confidence 57788999999999999999988754 47999999999997652 11124444 443221 1
Q ss_pred CCCCccEEEe
Q 038391 110 KQKGFSVILS 119 (186)
Q Consensus 110 ~~~~~D~V~~ 119 (186)
+.++||+|++
T Consensus 112 ~~~~~DvVLa 121 (200)
T 3fzg_A 112 YKGTYDVVFL 121 (200)
T ss_dssp TTSEEEEEEE
T ss_pred CCCCcChhhH
Confidence 4678999998
No 259
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.81 E-value=2.2e-09 Score=92.65 Aligned_cols=97 Identities=22% Similarity=0.095 Sum_probs=70.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cC---------------CCCCeEEEEeeec
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LH---------------CDARVQTVSADVI 97 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~---------------~~~~~~~~~~d~~ 97 (186)
++.+|||+|||+|.++..++...+ +.+|+++|+++.+++. .. ...+++++++|+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~----~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP----AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS----CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHH
Confidence 578999999999999999999864 3689999999988543 11 1123788888876
Q ss_pred CCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEE
Q 038391 98 NLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 98 ~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
..... ..++||+|+.|++.. ...+++.+.+ .||+||.+++
T Consensus 123 ~~~~~-------~~~~fD~I~lDP~~~---------------~~~~l~~a~~------------------~lk~gG~l~v 162 (378)
T 2dul_A 123 RLMAE-------RHRYFHFIDLDPFGS---------------PMEFLDTALR------------------SAKRRGILGV 162 (378)
T ss_dssp HHHHH-------STTCEEEEEECCSSC---------------CHHHHHHHHH------------------HEEEEEEEEE
T ss_pred HHHHh-------ccCCCCEEEeCCCCC---------------HHHHHHHHHH------------------hcCCCCEEEE
Confidence 43211 135799999986311 1245666666 8999999888
Q ss_pred EE
Q 038391 178 KL 179 (186)
Q Consensus 178 ~~ 179 (186)
..
T Consensus 163 t~ 164 (378)
T 2dul_A 163 TA 164 (378)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 260
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.81 E-value=4e-09 Score=87.38 Aligned_cols=70 Identities=19% Similarity=0.299 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++++.+|||+|||+|.++..+++. +.+|+|+|+++.++... ....+++++++|+.+.+.
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-------- 91 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEK------AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-------- 91 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHH------SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC--------
T ss_pred CCCCCEEEEEcCcccHHHHHHHhh------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc--------
Confidence 577889999999999999999998 47999999999996541 112579999999876531
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
.+||+|++|.+
T Consensus 92 --~~fD~vv~nlp 102 (285)
T 1zq9_A 92 --PFFDTCVANLP 102 (285)
T ss_dssp --CCCSEEEEECC
T ss_pred --hhhcEEEEecC
Confidence 37999999875
No 261
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.80 E-value=1.8e-08 Score=87.04 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=64.4
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCC----------------------------------CCCeEEE
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLD----------------------------------NGGSVVG 72 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~----------------------------------~~~~v~g 72 (186)
+...+......+++..|||++||+|.+++.++....+.- ...+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 444444555567889999999999999999988742100 1257999
Q ss_pred EeCCCCCCCCc-------CCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCC
Q 038391 73 IDVKKVKVPSL-------HCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMC 122 (186)
Q Consensus 73 vDis~~~i~~~-------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~ 122 (186)
+|+++.++..+ ....++++.++|+.++.. ..+||+|++|++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~---------~~~~D~Iv~NPP 310 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS---------EDEFGFIITNPP 310 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC---------SCBSCEEEECCC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc---------CCCCcEEEECCC
Confidence 99999997652 233479999999887642 358999999986
No 262
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.75 E-value=6.9e-08 Score=83.62 Aligned_cols=87 Identities=10% Similarity=0.113 Sum_probs=63.7
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCC----------------------------------CCCeEEE
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLD----------------------------------NGGSVVG 72 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~----------------------------------~~~~v~g 72 (186)
+...+......+++..|||.+||+|.+++.++......- ...+|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 444444444567889999999999999999987643200 1146999
Q ss_pred EeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCC
Q 038391 73 IDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMC 122 (186)
Q Consensus 73 vDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~ 122 (186)
+|+++.++.. +....++++.++|+.+... ..+||+|++|++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~---------~~~fD~Iv~NPP 316 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT---------EDEYGVVVANPP 316 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC---------CCCSCEEEECCC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC---------CCCCCEEEECCC
Confidence 9999999754 2334468999999987642 358999999986
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.75 E-value=1.1e-07 Score=82.28 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=64.4
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCC----------------------------------CCCeEEE
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLD----------------------------------NGGSVVG 72 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~----------------------------------~~~~v~g 72 (186)
|...+......+++..|||.+||+|.+++.++....+.- ...+|+|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 444444445567889999999999999999887643200 0146999
Q ss_pred EeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCC
Q 038391 73 IDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCP 123 (186)
Q Consensus 73 vDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~ 123 (186)
+|+++.++.. +....++++.++|+.+... ..+||+|++|++.
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~---------~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT---------NKINGVLISNPPY 310 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC---------CCCSCEEEECCCC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc---------cCCcCEEEECCch
Confidence 9999999754 2334569999999987642 3589999999863
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.74 E-value=8.2e-09 Score=92.87 Aligned_cols=121 Identities=11% Similarity=0.097 Sum_probs=76.0
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCC--------------CCeEEEEeCCCCCCCCc------CCCC-----CeEE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDN--------------GGSVVGIDVKKVKVPSL------HCDA-----RVQT 91 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~--------------~~~v~gvDis~~~i~~~------~~~~-----~~~~ 91 (186)
..++.+|||.|||+|+++..+++.+....+ ..+++|+|+++.++..+ +... +..+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 466889999999999999999887643110 13799999999885431 1112 2677
Q ss_pred EEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcc-c-c-hHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcc
Q 038391 92 VSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITT-K-D-AALSVELGMRAVDLALGPAALASPVNNSDSSTDSGV 168 (186)
Q Consensus 92 ~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (186)
.++|....... ...+||+|++|+|+....... . + .......-..++..+.+ .
T Consensus 247 ~~gDtL~~~~~-------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~------------------~ 301 (541)
T 2ar0_A 247 RLGNTLGSDGE-------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIE------------------T 301 (541)
T ss_dssp EESCTTSHHHH-------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHH------------------H
T ss_pred EeCCCcccccc-------cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHH------------------H
Confidence 88886543211 246899999998744322110 0 0 00000112256777776 9
Q ss_pred cccCcEEEEEEccC
Q 038391 169 LKPGGHLVIKLLES 182 (186)
Q Consensus 169 LkpgG~lvi~~~~~ 182 (186)
|||||++++.+-++
T Consensus 302 Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 302 LHPGGRAAVVVPDN 315 (541)
T ss_dssp EEEEEEEEEEEEHH
T ss_pred hCCCCEEEEEecCc
Confidence 99999999887543
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.73 E-value=7.6e-09 Score=84.77 Aligned_cols=75 Identities=11% Similarity=0.216 Sum_probs=58.6
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
+.++.+|||+|||+|.+|..+++. +.+|+|+|+++.+++.. ....+++++++|+.+.+...+ . .+.
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~------~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~---~-~~~ 96 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTE------CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSV---K-TDK 96 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTT------SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGS---C-CSS
T ss_pred CCCcCEEEEEcccccHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHh---c-cCC
Confidence 577899999999999999999987 47999999999997541 124689999999988764321 1 135
Q ss_pred CccEEEeCCC
Q 038391 113 GFSVILSDMC 122 (186)
Q Consensus 113 ~~D~V~~d~~ 122 (186)
+|| |++|.+
T Consensus 97 ~~~-vv~NlP 105 (255)
T 3tqs_A 97 PLR-VVGNLP 105 (255)
T ss_dssp CEE-EEEECC
T ss_pred CeE-EEecCC
Confidence 788 777764
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.73 E-value=3.6e-09 Score=91.85 Aligned_cols=100 Identities=14% Similarity=0.024 Sum_probs=71.4
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCC-eEEEEeeecCCChhhHhhhCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDAR-VQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~-~~~~~~d~~~~~~~~l~~~~~ 109 (186)
++|.+|||++||+|.++..++...+. ..+|+++|+++.+++. +....+ ++++++|+.+.... .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~g---a~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~---~--- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSC---VEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRK---E--- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSC---EEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHS---C---
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH---h---
Confidence 46889999999999999999997531 2689999999988643 233334 88888887543110 1
Q ss_pred CCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 110 KQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|++|+. + . ...++..+.+ .|+|||.|+++.
T Consensus 122 ~~~~fD~V~lDP~----g--~---------~~~~l~~a~~------------------~Lk~gGll~~t~ 158 (392)
T 3axs_A 122 WGFGFDYVDLDPF----G--T---------PVPFIESVAL------------------SMKRGGILSLTA 158 (392)
T ss_dssp CSSCEEEEEECCS----S--C---------CHHHHHHHHH------------------HEEEEEEEEEEE
T ss_pred hCCCCcEEEECCC----c--C---------HHHHHHHHHH------------------HhCCCCEEEEEe
Confidence 1458999999862 1 1 1135555665 899999998876
No 267
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.73 E-value=3.7e-08 Score=83.74 Aligned_cols=102 Identities=14% Similarity=0.141 Sum_probs=73.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
++...+|||+|||+|.++..++++++ +.+++..|. |.+++. .....+++++.+|+...+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p----~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~---------- 241 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYP----GCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP---------- 241 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCS----SCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC----------
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCC----CceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC----------
Confidence 46678999999999999999999986 478999997 444432 233578999999987542
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
...+|++++. ...|.... +.....+..+.+ .|+|||+++|...
T Consensus 242 ~~~~D~~~~~-----~vlh~~~d----~~~~~iL~~~~~------------------al~pgg~lli~e~ 284 (353)
T 4a6d_A 242 LPEADLYILA-----RVLHDWAD----GKCSHLLERIYH------------------TCKPGGGILVIES 284 (353)
T ss_dssp CCCCSEEEEE-----SSGGGSCH----HHHHHHHHHHHH------------------HCCTTCEEEEEEC
T ss_pred CCCceEEEee-----eecccCCH----HHHHHHHHHHHh------------------hCCCCCEEEEEEe
Confidence 2357999883 22443332 224456677777 8999999988654
No 268
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.72 E-value=1.8e-08 Score=81.62 Aligned_cols=73 Identities=12% Similarity=0.261 Sum_probs=56.0
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.++... ....+++++++|+.+.+.. .+
T Consensus 27 ~~~~~~~VLDiG~G~G~lt~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~-------~~ 93 (244)
T 1qam_A 27 RLNEHDNIFEIGSGKGHFTLELVQR------CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP-------KN 93 (244)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCC-------SS
T ss_pred CCCCCCEEEEEeCCchHHHHHHHHc------CCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcc-------cC
Confidence 3567889999999999999999998 47999999999986541 1235799999998876532 12
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
..| .|++|.+
T Consensus 94 ~~~-~vv~nlP 103 (244)
T 1qam_A 94 QSY-KIFGNIP 103 (244)
T ss_dssp CCC-EEEEECC
T ss_pred CCe-EEEEeCC
Confidence 345 5777765
No 269
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.71 E-value=3.5e-09 Score=90.65 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=54.1
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCC---
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPK--- 110 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~--- 110 (186)
+.+|||+|||+|.++..+++. ..+|+|+|+++.+++.+ +...+++++++|+.+.. ..+...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~------~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~----~~~~~~~~~ 283 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN------FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT----QAMNGVREF 283 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG------SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH----HHHSSCCCC
T ss_pred CCEEEEccCCCCHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH----HHHhhcccc
Confidence 678999999999999999875 46999999999997541 12247899999876432 112110
Q ss_pred ---------CCCccEEEeCCC
Q 038391 111 ---------QKGFSVILSDMC 122 (186)
Q Consensus 111 ---------~~~~D~V~~d~~ 122 (186)
+.+||+|++|++
T Consensus 284 ~~l~~~~~~~~~fD~Vv~dPP 304 (369)
T 3bt7_A 284 NRLQGIDLKSYQCETIFVDPP 304 (369)
T ss_dssp TTGGGSCGGGCCEEEEEECCC
T ss_pred ccccccccccCCCCEEEECcC
Confidence 137999999875
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.70 E-value=6.4e-09 Score=87.22 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=59.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
++++.+|||+|||+|+++..+++.++ +++|+|+|+++.++..+ ....+++++++|+.++.. .+... ..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~----~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~-~l~~~--g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP----GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-LLKTL--GI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT----TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH-HHHHT--TC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH-HHHhc--CC
Confidence 57889999999999999999999864 47999999999997541 111589999999876531 12221 11
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
.+||.|++|.+
T Consensus 97 ~~~D~Vl~D~g 107 (301)
T 1m6y_A 97 EKVDGILMDLG 107 (301)
T ss_dssp SCEEEEEEECS
T ss_pred CCCCEEEEcCc
Confidence 58999999864
No 271
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.70 E-value=7.3e-09 Score=88.97 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=74.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----------CC----CCeEEEEeeecCCChhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----------CD----ARVQTVSADVINLPSNQ 103 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----------~~----~~~~~~~~d~~~~~~~~ 103 (186)
+.+.+||++|||.|..+..++++. ..+|++||+++.+++.++ .. .+++++.+|+....
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-----~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L--- 258 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-----PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL--- 258 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-----CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH---
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHH---
Confidence 357899999999999999998872 368999999998864310 11 26899999987542
Q ss_pred HhhhCCCCCCccEEEeCCCC-CCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 104 VRALSPKQKGFSVILSDMCP-SVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..+...+++||+|++|.+- +... ......+.+..+..+..+.+ .|+|||.|++..
T Consensus 259 -~~~~~~~~~fDvII~D~~d~P~~~--~p~~L~t~eFy~~~~~~~~~------------------~L~pgGilv~qs 314 (364)
T 2qfm_A 259 -KRYAKEGREFDYVINDLTAVPIST--SPEEDSTWEFLRLILDLSMK------------------VLKQDGKYFTQG 314 (364)
T ss_dssp -HHHHHHTCCEEEEEEECCSSCCCC--C----CHHHHHHHHHHHHHH------------------TEEEEEEEEEEE
T ss_pred -HhhhccCCCceEEEECCCCcccCc--CchhhhHHHHHHHHHHHHHh------------------hCCCCcEEEEEc
Confidence 2110014689999999752 1110 11111223334444444566 999999999874
No 272
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=5.6e-08 Score=90.83 Aligned_cols=79 Identities=13% Similarity=0.157 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------------CCCCCeEEEEeeecCCChhhH
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------------HCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------------~~~~~~~~~~~d~~~~~~~~l 104 (186)
.+++.+|||.|||+|.++..+++.++.. ...+++|+|+++.++..+ +......+...|+......
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei-~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~-- 395 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNV-MPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE-- 395 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTC-CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG--
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhccc-CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc--
Confidence 3568899999999999999999886420 125899999999875332 1111223334444443211
Q ss_pred hhhCCCCCCccEEEeCCCC
Q 038391 105 RALSPKQKGFSVILSDMCP 123 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~ 123 (186)
...+||+|++|+|.
T Consensus 396 -----~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 396 -----DFANVSVVVMNPPY 409 (878)
T ss_dssp -----GGTTEEEEEECCBC
T ss_pred -----ccCCCCEEEECCCc
Confidence 24689999999874
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.56 E-value=3.1e-08 Score=82.11 Aligned_cols=81 Identities=11% Similarity=0.202 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC--CCCeEEEEeeecCCChhhHhhhCCCC-CC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC--DARVQTVSADVINLPSNQVRALSPKQ-KG 113 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~--~~~~~~~~~d~~~~~~~~l~~~~~~~-~~ 113 (186)
++++.+|||+|||+|.+|..+++.... ..++|+|+|+++.+++.... ..+++++++|+.+.+...+ ..+. ..
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~--~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~---~~~~~~~ 114 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLAT--PGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGSI---ARPGDEP 114 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCB--TTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGG---SCSSSSC
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCC--cCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhHh---cccccCC
Confidence 578899999999999999999998521 01349999999999765221 4679999999998865432 1100 13
Q ss_pred ccEEEeCCC
Q 038391 114 FSVILSDMC 122 (186)
Q Consensus 114 ~D~V~~d~~ 122 (186)
...|++|.+
T Consensus 115 ~~~vv~NlP 123 (279)
T 3uzu_A 115 SLRIIGNLP 123 (279)
T ss_dssp CEEEEEECC
T ss_pred ceEEEEccC
Confidence 457888764
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.56 E-value=4e-08 Score=80.03 Aligned_cols=75 Identities=20% Similarity=0.328 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
+.++.+|||+|||+|.+|..+++. + ..+|+|+|+++.++... ....+++++++|+...+...+ .+.+
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~-~----~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~------~~~~ 97 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQH-P----LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSL------GKEL 97 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTS-C----CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGS------CSSE
T ss_pred CCCcCEEEEEcCchHHHHHHHHHc-C----CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHc------cCCc
Confidence 567889999999999999999987 1 37999999999996542 134578999999988765421 1234
Q ss_pred cEEEeCCCC
Q 038391 115 SVILSDMCP 123 (186)
Q Consensus 115 D~V~~d~~~ 123 (186)
.|++|.+.
T Consensus 98 -~vv~NlPy 105 (249)
T 3ftd_A 98 -KVVGNLPY 105 (249)
T ss_dssp -EEEEECCT
T ss_pred -EEEEECch
Confidence 78887753
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.55 E-value=1.9e-07 Score=86.39 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=63.4
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCC--------------------------------------CCC
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLD--------------------------------------NGG 68 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~--------------------------------------~~~ 68 (186)
|..........+++..|||.+||+|.+++.++....+-- ...
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 444444444457788999999999999998887631000 125
Q ss_pred eEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCC
Q 038391 69 SVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCP 123 (186)
Q Consensus 69 ~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~ 123 (186)
+|+|+|+++.++.. +.....+++.++|+.++..+. ..++||+|++|+|.
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~------~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL------PKGPYGTVLSNPPY 313 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC------TTCCCCEEEECCCC
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc------ccCCCCEEEeCCCc
Confidence 89999999999754 233446899999998764220 12389999999863
No 276
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.54 E-value=6.5e-09 Score=79.07 Aligned_cols=90 Identities=22% Similarity=0.276 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
+++|.+|||+|||.. ++|+|+.|++.+ +...++++.++|+.+++.. ..+.++|
T Consensus 10 ~~~g~~vL~~~~g~v--------------------~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~-----~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSS--------------------PVEALKGLVDKLQALTGNEGRVSVENIKQLLQS-----AHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTTS--------------------CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGG-----CCCSSCE
T ss_pred CCCCCEEEEecCCce--------------------eeeCCHHHHHHHHHhcccCcEEEEechhcCccc-----cCCCCCE
Confidence 678999999999861 277777776542 1222588999998765431 0035789
Q ss_pred cEEEeCCCCCCCCCcc-cchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 115 SVILSDMCPSVSGITT-KDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 115 D~V~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
|+|++.... .+. .+ ...++.++.+ +|||||+|++...
T Consensus 65 D~V~~~~~l----~~~~~~-------~~~~l~~~~r------------------~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 65 DIILSGLVP----GSTTLH-------SAEILAEIAR------------------ILRPGGCLFLKEP 102 (176)
T ss_dssp EEEEECCST----TCCCCC-------CHHHHHHHHH------------------HEEEEEEEEEEEE
T ss_pred eEEEECChh----hhcccC-------HHHHHHHHHH------------------HCCCCEEEEEEcc
Confidence 999995432 222 22 3568888888 9999999999643
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.54 E-value=2.9e-08 Score=89.38 Aligned_cols=80 Identities=14% Similarity=0.050 Sum_probs=51.1
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCC-----------CCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDN-----------GGSVVGIDVKKVKVPS-------LHCDARVQTVSADVIN 98 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~-----------~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~ 98 (186)
..++ +|||.|||+|+++..+++.+....+ ..+++|+|+++.++.. +....++.+.++|...
T Consensus 243 p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~ 321 (544)
T 3khk_A 243 PYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFL 321 (544)
T ss_dssp CCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTT
T ss_pred cCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhc
Confidence 3444 9999999999999888765420000 2589999999987433 1222233335666543
Q ss_pred CChhhHhhhCCCCCCccEEEeCCCCC
Q 038391 99 LPSNQVRALSPKQKGFSVILSDMCPS 124 (186)
Q Consensus 99 ~~~~~l~~~~~~~~~~D~V~~d~~~~ 124 (186)
.+.. ...+||+|++|+|..
T Consensus 322 ~~~~-------~~~~fD~Iv~NPPf~ 340 (544)
T 3khk_A 322 DDQH-------PDLRADFVMTNPPFN 340 (544)
T ss_dssp SCSC-------TTCCEEEEEECCCSS
T ss_pred Cccc-------ccccccEEEECCCcC
Confidence 3211 246899999998754
No 278
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.53 E-value=7.8e-09 Score=84.74 Aligned_cols=75 Identities=15% Similarity=0.049 Sum_probs=56.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCC-------CCCCCcC-------CCCCeEEEEeeecCCChh
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKK-------VKVPSLH-------CDARVQTVSADVINLPSN 102 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~-------~~i~~~~-------~~~~~~~~~~d~~~~~~~ 102 (186)
..++.+|||+|||+|.++..+++. +++|+|+|+++ .++..+. ...+++++++|+.+...
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~- 153 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP- 153 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH-
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH-
Confidence 456789999999999999999996 47999999999 7765421 12359999998865321
Q ss_pred hHhhhCCCC--CCccEEEeCCCC
Q 038391 103 QVRALSPKQ--KGFSVILSDMCP 123 (186)
Q Consensus 103 ~l~~~~~~~--~~~D~V~~d~~~ 123 (186)
.+ ++ ++||+|++|++.
T Consensus 154 ---~~--~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 154 ---AL--VKTQGKPDIVYLDPMY 171 (258)
T ss_dssp ---HH--HHHHCCCSEEEECCCC
T ss_pred ---hh--hccCCCccEEEECCCC
Confidence 11 12 589999999753
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.49 E-value=3.6e-07 Score=69.01 Aligned_cols=92 Identities=22% Similarity=0.224 Sum_probs=67.2
Q ss_pred CCCCEEEEEcccCC-hHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 38 KPGSSVLDLGCAPG-AWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 38 ~~~~~vLDlGcG~G-~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+++.+|||+|||+| ..+..+++.. +..|+++|+++..+. +++.|+.+..... -+.||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~-----g~~V~atDInp~Av~---------~v~dDiF~P~~~~-------Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS-----KVDLVLTDIKPSHGG---------IVRDDITSPRMEI-------YRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS-----CCEEEEECSSCSSTT---------EECCCSSSCCHHH-------HTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC-----CCeEEEEECCccccc---------eEEccCCCCcccc-------cCCcCE
Confidence 45679999999999 5899999853 578999999999976 7888988765431 248999
Q ss_pred EEe-CCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCCC
Q 038391 117 ILS-DMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQDA 185 (186)
Q Consensus 117 V~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~ 185 (186)
|.+ +++ . ++....++.+. +-|.-|+|+.|.+|..
T Consensus 93 IYsirPP------~--------El~~~i~~lA~---------------------~v~adliI~pL~~E~~ 127 (153)
T 2k4m_A 93 IYSIRPP------A--------EIHSSLMRVAD---------------------AVGARLIIKPLTGEDI 127 (153)
T ss_dssp EEEESCC------T--------TTHHHHHHHHH---------------------HHTCEEEEECBTTBCC
T ss_pred EEEcCCC------H--------HHHHHHHHHHH---------------------HcCCCEEEEcCCCCcC
Confidence 954 332 1 22334555554 3478899998888764
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.49 E-value=1.9e-07 Score=84.04 Aligned_cols=81 Identities=15% Similarity=0.060 Sum_probs=57.9
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCC-CCeEEEEeeecCCChhhHhhhCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCD-ARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~-~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
.++.+|+|.|||+|+++..+++.+... +..+++|+|+++.++.. +... .+..+.++|......+. .
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~-~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~-----~ 293 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQP-QTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPT-----Q 293 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCT-TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCC-----S
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhc-cCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccc-----c
Confidence 467899999999999999999886421 24689999999987433 1121 45778888876542100 0
Q ss_pred CCCCccEEEeCCCCC
Q 038391 110 KQKGFSVILSDMCPS 124 (186)
Q Consensus 110 ~~~~~D~V~~d~~~~ 124 (186)
...+||+|++|+|..
T Consensus 294 ~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 294 EPTNFDGVLMNPPYS 308 (542)
T ss_dssp SCCCBSEEEECCCTT
T ss_pred ccccccEEEecCCcC
Confidence 256899999998754
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.48 E-value=2.6e-08 Score=86.85 Aligned_cols=75 Identities=16% Similarity=0.110 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------C--CCCCeEEEEeeecCCChhhHhhhC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------H--CDARVQTVSADVINLPSNQVRALS 108 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~--~~~~~~~~~~d~~~~~~~~l~~~~ 108 (186)
+++|.+|||+|||+|..+..+++. +.+|+|+|+++.++..+ . ...+++++++|+.+.... .
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-~---- 159 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-I---- 159 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-H----
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-c----
Confidence 456899999999999999999886 57999999999997541 1 125799999998764211 1
Q ss_pred CCCCCccEEEeCCCC
Q 038391 109 PKQKGFSVILSDMCP 123 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~ 123 (186)
.+.+||+|++|++.
T Consensus 160 -~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 160 -KTFHPDYIYVDPAR 173 (410)
T ss_dssp -HHHCCSEEEECCEE
T ss_pred -cCCCceEEEECCCC
Confidence 13589999999864
No 282
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.45 E-value=3.3e-08 Score=81.61 Aligned_cols=72 Identities=14% Similarity=0.047 Sum_probs=55.8
Q ss_pred CCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 36 LIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
.+.+..+|||||||.|-++..++...+ ..+|+++|+++.+++. .....+.++...|..... +
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~p----~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~---------p 195 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLPA----ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR---------L 195 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCCT----TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC---------C
T ss_pred ccCCCceeeeeccCccHHHHHHHhhCC----CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC---------C
Confidence 456678999999999999999988654 5899999999999765 122345677777765443 4
Q ss_pred CCCccEEEeC
Q 038391 111 QKGFSVILSD 120 (186)
Q Consensus 111 ~~~~D~V~~d 120 (186)
..++|++++.
T Consensus 196 ~~~~DvaL~l 205 (281)
T 3lcv_B 196 DEPADVTLLL 205 (281)
T ss_dssp CSCCSEEEET
T ss_pred CCCcchHHHH
Confidence 6789999984
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.45 E-value=8.9e-08 Score=78.20 Aligned_cols=78 Identities=8% Similarity=0.109 Sum_probs=55.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC----CCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH----CDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~----~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
++++.+|||+|||+|.+|. +. ..+ ..+|+|+|+++.|++... ...+++++++|+...+....... .+
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~~----~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~---~~ 89 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GER----LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEK---MG 89 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HTT----CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHH---HT
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hCC----CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcc---cC
Confidence 5778899999999999999 54 421 234999999999975421 12479999999988765432110 12
Q ss_pred CccEEEeCCCC
Q 038391 113 GFSVILSDMCP 123 (186)
Q Consensus 113 ~~D~V~~d~~~ 123 (186)
..+.|++|.+.
T Consensus 90 ~~~~vvsNlPY 100 (252)
T 1qyr_A 90 QPLRVFGNLPY 100 (252)
T ss_dssp SCEEEEEECCT
T ss_pred CceEEEECCCC
Confidence 45789998763
No 284
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.42 E-value=2.2e-07 Score=75.86 Aligned_cols=67 Identities=21% Similarity=0.182 Sum_probs=52.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
.+..+|||+|||.|-++..+. + +.+++|+||++.+++.. ....+.++...|....+ +.+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~----~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~---------~~~ 167 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G----IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP---------PAE 167 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T----CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---------CCC
T ss_pred CCCCeEEEecCCccHHHHHhc---c----CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---------CCC
Confidence 567899999999999998877 2 58999999999997651 23456778888876654 346
Q ss_pred CccEEEeC
Q 038391 113 GFSVILSD 120 (186)
Q Consensus 113 ~~D~V~~d 120 (186)
++|+|++.
T Consensus 168 ~~DvvLll 175 (253)
T 3frh_A 168 AGDLALIF 175 (253)
T ss_dssp BCSEEEEE
T ss_pred CcchHHHH
Confidence 99999883
No 285
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.40 E-value=1.6e-07 Score=85.91 Aligned_cols=98 Identities=20% Similarity=0.221 Sum_probs=65.8
Q ss_pred CCEEEEEcccCChHH---HHHHHHhCCCCCCCeEEEEeCCCCCC------CCcCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 40 GSSVLDLGCAPGAWL---QVACQSLGPLDNGGSVVGIDVKKVKV------PSLHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~---~~l~~~~~~~~~~~~v~gvDis~~~i------~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
+..|||+|||+|-+. ..+++..+. ..+||+||.++.+. ..+....+++++++|+.+...
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~---~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~L--------- 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADR---RIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVA--------- 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTC---EEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCC---------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCC---CcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccC---------
Confidence 457999999999884 444444221 23799999998542 124566789999999988752
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
.+++|+|++-. -|.. ...+.. . +.+.-..+ .|||||.++
T Consensus 426 PEKVDIIVSEw----MG~f-Ll~E~m---l-evL~Ardr------------------~LKPgGimi 464 (637)
T 4gqb_A 426 PEKADIIVSEL----LGSF-ADNELS---P-ECLDGAQH------------------FLKDDGVSI 464 (637)
T ss_dssp SSCEEEEECCC----CBTT-BGGGCH---H-HHHHHHGG------------------GEEEEEEEE
T ss_pred CcccCEEEEEc----Cccc-ccccCC---H-HHHHHHHH------------------hcCCCcEEc
Confidence 47999999953 2222 222221 2 45555566 999999976
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.39 E-value=5.8e-08 Score=79.75 Aligned_cols=74 Identities=19% Similarity=0.141 Sum_probs=55.1
Q ss_pred CCCC--CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCC-------CCCc-------C-CCCCeEEEEeeecCC
Q 038391 37 IKPG--SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVK-------VPSL-------H-CDARVQTVSADVINL 99 (186)
Q Consensus 37 ~~~~--~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~-------i~~~-------~-~~~~~~~~~~d~~~~ 99 (186)
++++ .+|||+|||+|..+..+++. +++|+++|+++.+ +... . ...+++++++|..+.
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~ 157 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA 157 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH
Confidence 4567 89999999999999999998 4689999999965 2211 1 124789999987653
Q ss_pred ChhhHhhhCCCCCCccEEEeCCCC
Q 038391 100 PSNQVRALSPKQKGFSVILSDMCP 123 (186)
Q Consensus 100 ~~~~l~~~~~~~~~~D~V~~d~~~ 123 (186)
... + ..+||+|++|++.
T Consensus 158 L~~----~---~~~fDvV~lDP~y 174 (258)
T 2oyr_A 158 LTD----I---TPRPQVVYLDPMF 174 (258)
T ss_dssp STT----C---SSCCSEEEECCCC
T ss_pred HHh----C---cccCCEEEEcCCC
Confidence 211 1 2479999999764
No 287
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.37 E-value=4.2e-07 Score=75.97 Aligned_cols=106 Identities=22% Similarity=0.215 Sum_probs=78.7
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----------cCCCCCeEEEEeeecCCChhhHhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----------LHCDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----------~~~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
+..++||-+|-|.|+.+..+++..+ ..+|+.|||++..++. ...+++++++.+|....-..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~----v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~---- 153 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKN----VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---- 153 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTT----CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC----
T ss_pred CCCCeEEEECCCchHHHHHHHHcCC----cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh----
Confidence 4567999999999999999998753 3689999999988543 23468999999998765432
Q ss_pred hCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 107 LSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
..++||+|+.|..-+........ ...+.+.+.+ .|+|||+++.+.
T Consensus 154 ---~~~~yDvIi~D~~dp~~~~~~L~-------t~eFy~~~~~------------------~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 154 ---TSQTFDVIISDCTDPIGPGESLF-------TSAFYEGCKR------------------CLNPGGIFVAQN 198 (294)
T ss_dssp ---SSCCEEEEEESCCCCCCTTCCSS-------CCHHHHHHHH------------------TEEEEEEEEEEE
T ss_pred ---ccccCCEEEEeCCCcCCCchhhc-------CHHHHHHHHH------------------HhCCCCEEEEec
Confidence 35799999999742221111111 3367888887 999999999864
No 288
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=98.19 E-value=3.8e-06 Score=69.55 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=72.7
Q ss_pred cccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEE-EeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 47 GCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTV-SADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 47 GcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~-~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
.+++|....++.+. .|-+|.-||..-....+ ....+..+++ +.|+..... .+++|+|++||
T Consensus 149 ~~~~~~~~~~~~k~-----~g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~---------~~k~DvV~SDM 214 (320)
T 2hwk_A 149 EHPQSDFSSFVSKL-----KGRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGD---------VPKYDIIFVNV 214 (320)
T ss_dssp CCCCCCCHHHHHTS-----SCSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTT---------SCCEEEEEEEC
T ss_pred ccCCCCHHHHHhhC-----CCcEEEEEecccccCCceeEeeccCCCceeecccccCCccc---------cCcCCEEEEcC
Confidence 56667677666665 25688888533322111 2223445565 666665431 26799999999
Q ss_pred CCCCCCCc-c--cchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccCCC
Q 038391 122 CPSVSGIT-T--KDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLESQD 184 (186)
Q Consensus 122 ~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~ 184 (186)
+++..|++ . .|+...+.+ ++..+.. +|+|||+|++|.|.+.|
T Consensus 215 Apn~sGh~yqQC~DHarii~L---al~fA~~------------------vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 215 RTPYKYHHYQQCEDHAIKLSM---LTKKACL------------------HLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp CCCCCSCHHHHHHHHHHHHHH---THHHHGG------------------GEEEEEEEEEEECCCCS
T ss_pred CCCCCCccccccchHHHHHHH---HHHHHHH------------------hcCCCceEEEEEecCCc
Confidence 99999999 6 777666666 7888888 99999999999999874
No 289
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.16 E-value=4.4e-05 Score=65.73 Aligned_cols=80 Identities=18% Similarity=0.114 Sum_probs=47.7
Q ss_pred CCEEEEEcccCChHHHHHHH--------Hh---CCCCCCCeEEEEeCCCCC-------CCCcC-----------CCCCeE
Q 038391 40 GSSVLDLGCAPGAWLQVACQ--------SL---GPLDNGGSVVGIDVKKVK-------VPSLH-----------CDARVQ 90 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~--------~~---~~~~~~~~v~gvDis~~~-------i~~~~-----------~~~~~~ 90 (186)
.-+|+|+|||+|..|..++. ++ +..-+..+|+..|+-... +.... ...+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46899999999999988732 22 111135789999988877 23211 011223
Q ss_pred EEEeeecCCChhhHhhhCCCCCCccEEEeCCCCC
Q 038391 91 TVSADVINLPSNQVRALSPKQKGFSVILSDMCPS 124 (186)
Q Consensus 91 ~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~ 124 (186)
|+.+.-.+.-.+ + .+.++||+|+++.+.+
T Consensus 133 f~~gvpgSFy~r----l-fP~~S~d~v~Ss~aLH 161 (374)
T 3b5i_A 133 FVAGVPGSFYRR----L-FPARTIDFFHSAFSLH 161 (374)
T ss_dssp EEEEEESCTTSC----C-SCTTCEEEEEEESCTT
T ss_pred EEEecChhhhcc----c-CCCcceEEEEecceee
Confidence 444443332111 1 2578999999987543
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.15 E-value=1.9e-06 Score=71.52 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=62.3
Q ss_pred HHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-C-CCCeEEEEeeecCCChhhHh
Q 038391 28 LQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-C-DARVQTVSADVINLPSNQVR 105 (186)
Q Consensus 28 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~-~~~~~~~~~d~~~~~~~~l~ 105 (186)
.+++..+. ++++..+||.+||.|+.+..+++. +++|+|+|.++.++..+. . ..+++++++++.++.. .+.
T Consensus 12 ~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~------~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~-~L~ 83 (285)
T 1wg8_A 12 QEALDLLA-VRPGGVYVDATLGGAGHARGILER------GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR-HLA 83 (285)
T ss_dssp HHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH-HHH
T ss_pred HHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC------CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHH-HHH
Confidence 33444443 678899999999999999999997 379999999999874421 1 1589999999987642 233
Q ss_pred hhCCCCCCccEEEeCC
Q 038391 106 ALSPKQKGFSVILSDM 121 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~ 121 (186)
... .+++|.|+.|.
T Consensus 84 ~~g--~~~vDgIL~DL 97 (285)
T 1wg8_A 84 ALG--VERVDGILADL 97 (285)
T ss_dssp HTT--CSCEEEEEEEC
T ss_pred HcC--CCCcCEEEeCC
Confidence 332 25899999875
No 291
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.14 E-value=8.2e-07 Score=81.89 Aligned_cols=107 Identities=17% Similarity=0.151 Sum_probs=65.7
Q ss_pred CCEEEEEcccCChHHHHH---HHHhC----CCC--CCCeEEEEeCCCCCCC------CcCCCCCeEEEEeeecCCChhhH
Q 038391 40 GSSVLDLGCAPGAWLQVA---CQSLG----PLD--NGGSVVGIDVKKVKVP------SLHCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l---~~~~~----~~~--~~~~v~gvDis~~~i~------~~~~~~~~~~~~~d~~~~~~~~l 104 (186)
+..|||+|||+|-+.... ++..+ ... ...+|++||.++..+. .+....+++++++|+.+...+.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~- 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA- 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc-
Confidence 468999999999986433 22221 000 0249999999985531 1345677999999998764310
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEE
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLV 176 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lv 176 (186)
.. ...+++|+|++-. .|.. .+.+ +..+.+.-+.+ .|||||.++
T Consensus 489 ~~--~~~ekVDIIVSEl----mGsf-l~nE----L~pe~Ld~v~r------------------~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KD--RGFEQPDIIVSEL----LGSF-GDNE----LSPECLDGVTG------------------FLKPTTISI 531 (745)
T ss_dssp HH--TTCCCCSEEEECC----CBTT-BGGG----SHHHHHHTTGG------------------GSCTTCEEE
T ss_pred cc--CCCCcccEEEEec----cccc-cchh----ccHHHHHHHHH------------------hCCCCcEEE
Confidence 00 0146999999954 2222 1222 23345555556 999999876
No 292
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.06 E-value=4.4e-06 Score=71.00 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=65.8
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCChhhH
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~~~l 104 (186)
+.|.+..+. +++|..++|.+||.|+.+..+++.+++ .++|+|+|.++.+++.+ ....+++++++++.++.. .+
T Consensus 46 l~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~---~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~-~L 120 (347)
T 3tka_A 46 LDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGE---EGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGE-YV 120 (347)
T ss_dssp THHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCT---TCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHH-HH
T ss_pred HHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHH-HH
Confidence 344555444 688999999999999999999998765 68999999999886542 124689999999887642 22
Q ss_pred hhhCCCCCCccEEEeCC
Q 038391 105 RALSPKQKGFSVILSDM 121 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~ 121 (186)
..... .+++|.|+.|.
T Consensus 121 ~~~g~-~~~vDgILfDL 136 (347)
T 3tka_A 121 AERDL-IGKIDGILLDL 136 (347)
T ss_dssp HHTTC-TTCEEEEEEEC
T ss_pred HhcCC-CCcccEEEECC
Confidence 22211 23699999975
No 293
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.06 E-value=2.7e-06 Score=69.59 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=66.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHh------CCCC--CCCeEEEEeCCCCC---CC-------------C---c-------
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSL------GPLD--NGGSVVGIDVKKVK---VP-------------S---L------- 83 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~------~~~~--~~~~v~gvDis~~~---i~-------------~---~------- 83 (186)
+++.+|||+|+|+|..+..+++.+ .+.. ...+++++|..+.. +. . .
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 455799999999999998887764 3310 02589999998821 11 0 0
Q ss_pred --------CCCCCeEEEEeeecCCChhhHhhhCC-CCCCccEEEeCCC-CCCC-CCcccchHHHHHHHHHHHHHHcCCcc
Q 038391 84 --------HCDARVQTVSADVINLPSNQVRALSP-KQKGFSVILSDMC-PSVS-GITTKDAALSVELGMRAVDLALGPAA 152 (186)
Q Consensus 84 --------~~~~~~~~~~~d~~~~~~~~l~~~~~-~~~~~D~V~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (186)
....+++++.+|+.+.. ..+.. ....||.|+.|+. |... ..|. ..++..+.+
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l----~~~~~~~~~~~D~iflD~fsp~~~p~lw~----------~~~l~~l~~--- 201 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELI----SQLDDSLNQKVDAWFLDGFAPAKNPDMWT----------QNLFNAMAR--- 201 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHG----GGSCGGGTTCEEEEEECSSCTTTCGGGCC----------HHHHHHHHH---
T ss_pred chhheeccCCceEEEEEECcHHHHH----hhcccccCCeEEEEEECCCCcccChhhcC----------HHHHHHHHH---
Confidence 01135667788876531 11100 0137999999862 2111 1122 256777777
Q ss_pred cCCCCCCCCCCCCCcccccCcEEEE
Q 038391 153 LASPVNNSDSSTDSGVLKPGGHLVI 177 (186)
Q Consensus 153 ~~~~~~~~~~~~~~~~LkpgG~lvi 177 (186)
+|||||+|+.
T Consensus 202 ---------------~L~pGG~l~t 211 (257)
T 2qy6_A 202 ---------------LARPGGTLAT 211 (257)
T ss_dssp ---------------HEEEEEEEEE
T ss_pred ---------------HcCCCcEEEE
Confidence 9999999883
No 294
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.04 E-value=9.1e-06 Score=64.37 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=51.5
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCC--CCCeEEEEeeecCCC--------
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHC--DARVQTVSADVINLP-------- 100 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~--~~~~~~~~~d~~~~~-------- 100 (186)
++..+||++|| |+-|..+++.. +++|+.+|.++...+. +.. ..+++++.+|+....
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~-----~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~ 101 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP-----GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSD 101 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST-----TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSS
T ss_pred hCCCEEEEECc--hHHHHHHHHcC-----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccc
Confidence 35779999998 57778887731 4899999999987433 233 567999999865421
Q ss_pred --hhhHhhh------CCCCCCccEEEeCC
Q 038391 101 --SNQVRAL------SPKQKGFSVILSDM 121 (186)
Q Consensus 101 --~~~l~~~------~~~~~~~D~V~~d~ 121 (186)
...+..+ ....++||+|+.|+
T Consensus 102 ~~~~~l~~~~~~i~~~~~~~~fDlIfIDg 130 (202)
T 3cvo_A 102 AKWRSYPDYPLAVWRTEGFRHPDVVLVDG 130 (202)
T ss_dssp TTGGGTTHHHHGGGGCTTCCCCSEEEECS
T ss_pred hhhhhHHHHhhhhhccccCCCCCEEEEeC
Confidence 0111111 01136899999986
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.95 E-value=4.1e-05 Score=63.48 Aligned_cols=104 Identities=13% Similarity=0.036 Sum_probs=70.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCC-CCCeEEEEeCCCCCCCC---------------------------------c
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLD-NGGSVVGIDVKKVKVPS---------------------------------L 83 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~-~~~~v~gvDis~~~i~~---------------------------------~ 83 (186)
...+.||++|+..|+.+..++..++..+ ++.+|+++|..+.+-+. .
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3456999999999999999887763111 15789999976543110 1
Q ss_pred CC-CCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCC
Q 038391 84 HC-DARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDS 162 (186)
Q Consensus 84 ~~-~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (186)
.. ..+++++.+++.+.. ..+ +.++||+|+.|+. . .+-....++....
T Consensus 185 gl~~~~I~li~Gda~etL----~~~--~~~~~d~vfIDaD------~-------y~~~~~~Le~~~p------------- 232 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTL----PTA--PIDTLAVLRMDGD------L-------YESTWDTLTNLYP------------- 232 (282)
T ss_dssp TCCSTTEEEEESCHHHHS----TTC--CCCCEEEEEECCC------S-------HHHHHHHHHHHGG-------------
T ss_pred CCCcCceEEEEeCHHHHH----hhC--CCCCEEEEEEcCC------c-------cccHHHHHHHHHh-------------
Confidence 12 368999999886422 122 3468999999762 1 0113456777776
Q ss_pred CCCCcccccCcEEEEE
Q 038391 163 STDSGVLKPGGHLVIK 178 (186)
Q Consensus 163 ~~~~~~LkpgG~lvi~ 178 (186)
.|+|||++++-
T Consensus 233 -----~L~pGGiIv~D 243 (282)
T 2wk1_A 233 -----KVSVGGYVIVD 243 (282)
T ss_dssp -----GEEEEEEEEES
T ss_pred -----hcCCCEEEEEc
Confidence 99999999873
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.93 E-value=6.9e-06 Score=73.66 Aligned_cols=93 Identities=19% Similarity=0.244 Sum_probs=58.0
Q ss_pred HHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCC---------CCeEEEEeCCCCCCCCc------CCCCCeEE
Q 038391 27 LLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDN---------GGSVVGIDVKKVKVPSL------HCDARVQT 91 (186)
Q Consensus 27 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~---------~~~v~gvDis~~~i~~~------~~~~~~~~ 91 (186)
+.++........++.+|+|-+||+|+++..+.+++...+. ...++|+|+.+.+...+ +.....++
T Consensus 205 Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I 284 (530)
T 3ufb_A 205 VVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRI 284 (530)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEE
T ss_pred HHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccc
Confidence 3333333333567889999999999999888876543211 24699999999774321 22233455
Q ss_pred EEeeecCCChhhHhhhCCCCCCccEEEeCCCC
Q 038391 92 VSADVINLPSNQVRALSPKQKGFSVILSDMCP 123 (186)
Q Consensus 92 ~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~ 123 (186)
..+|....+... . ....+||+|++|+|.
T Consensus 285 ~~~dtL~~~~~~---~-~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 285 DPENSLRFPLRE---M-GDKDRVDVILTNPPF 312 (530)
T ss_dssp ECSCTTCSCGGG---C-CGGGCBSEEEECCCS
T ss_pred cccccccCchhh---h-cccccceEEEecCCC
Confidence 666655433211 0 123589999999874
No 297
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.87 E-value=7e-05 Score=64.67 Aligned_cols=80 Identities=18% Similarity=0.097 Sum_probs=46.3
Q ss_pred CCEEEEEcccCChHHHHHHHH----hCC---------CCCCCeEEEEeCCCCCC-------CC--------cCCCCCeEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQS----LGP---------LDNGGSVVGIDVKKVKV-------PS--------LHCDARVQT 91 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~----~~~---------~~~~~~v~gvDis~~~i-------~~--------~~~~~~~~~ 91 (186)
.-+|+|+||++|..|..+... +.. ..+..+|+..|+-..-. .. .....+.-|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999999888876 111 01235777778764432 10 001112345
Q ss_pred EEeeecCCChhhHhhhCCCCCCccEEEeCCCCC
Q 038391 92 VSADVINLPSNQVRALSPKQKGFSVILSDMCPS 124 (186)
Q Consensus 92 ~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~ 124 (186)
+.+.-.+.= ..+ .+.+++|+|+++.+.+
T Consensus 133 ~~gvpgSFy----~rl-fp~~S~d~v~Ss~aLH 160 (384)
T 2efj_A 133 IGAMPGSFY----SRL-FPEESMHFLHSCYCLH 160 (384)
T ss_dssp EEECCSCTT----SCC-SCTTCEEEEEEESCTT
T ss_pred EEecchhhh----hcc-CCCCceEEEEecceee
Confidence 555433221 111 2578999999987543
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.77 E-value=2.5e-05 Score=67.31 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=74.3
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-----------C---CCCCeEEEEeeecCCChhh
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-----------H---CDARVQTVSADVINLPSNQ 103 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-----------~---~~~~~~~~~~d~~~~~~~~ 103 (186)
.+.++||=+|-|.|+....+.+. + ..+|+.|||++..++.+ . ..++++++.+|....-
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~----~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl--- 275 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K----PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL--- 275 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C----CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH---
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C----CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHH---
Confidence 34689999999999999999986 2 36899999999875431 1 1245788888876432
Q ss_pred HhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 104 VRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
++....+++||+|+.|..-.... ..+.........+.+++.+.+ .|+|||.++.+
T Consensus 276 -~~~~~~~~~yDvIIvDl~D~~~s-~~p~g~a~~Lft~eFy~~~~~------------------~L~p~GVlv~Q 330 (381)
T 3c6k_A 276 -KRYAKEGREFDYVINDLTAVPIS-TSPEEDSTWEFLRLILDLSMK------------------VLKQDGKYFTQ 330 (381)
T ss_dssp -HHHHHHTCCEEEEEEECCSSCCC-CC----CHHHHHHHHHHHHHH------------------TEEEEEEEEEE
T ss_pred -HhhhhccCceeEEEECCCCCccc-CcccCcchHHHHHHHHHHHHH------------------hcCCCCEEEEe
Confidence 21111246899999986311100 111111123335678888887 99999999975
No 299
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.75 E-value=8.2e-05 Score=63.70 Aligned_cols=78 Identities=15% Similarity=0.085 Sum_probs=47.3
Q ss_pred CCEEEEEcccCChHHHHHHHH--------h---CC-CCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQS--------L---GP-LDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLP 100 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~--------~---~~-~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~ 100 (186)
.-+|+|+||++|..|..+.+. . +. ..+..+|+..|+-...... .....+.-|+.+.-.+.=
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999888655443 1 10 1135789999998877321 011013456666544321
Q ss_pred hhhHhhhCCCCCCccEEEeCCC
Q 038391 101 SNQVRALSPKQKGFSVILSDMC 122 (186)
Q Consensus 101 ~~~l~~~~~~~~~~D~V~~d~~ 122 (186)
.+ + .+.+++|+|+++.+
T Consensus 132 ~r----l-fp~~S~d~v~Ss~a 148 (359)
T 1m6e_X 132 GR----L-FPRNTLHFIHSSYS 148 (359)
T ss_dssp SC----C-SCTTCBSCEEEESC
T ss_pred hc----c-CCCCceEEEEehhh
Confidence 11 1 25789999999875
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.39 E-value=0.00028 Score=60.58 Aligned_cols=102 Identities=16% Similarity=0.073 Sum_probs=65.2
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCC-cCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPS-LHCDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~-~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
-+++||.||.|+++.-+.+. |. .|+++|+++..+.. .....+..++++|+.++....+.........+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~a------G~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA------GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH------TCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHC------CCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 37999999999999999887 34 57899999988543 122345677889998886554432221246899999
Q ss_pred eCCCCCCCCCccc--chHHHHHHHHHHHHHHc
Q 038391 119 SDMCPSVSGITTK--DAALSVELGMRAVDLAL 148 (186)
Q Consensus 119 ~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 148 (186)
.+.+|..-..... .......+....+..+.
T Consensus 77 ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~ 108 (376)
T 3g7u_A 77 GGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVS 108 (376)
T ss_dssp ECCCCCTTC-------CHHHHHHHHHHHHHHH
T ss_pred ecCCCCCcccccCCCCCCchHHHHHHHHHHHH
Confidence 9887643322211 11223345555555555
No 301
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.15 E-value=0.00023 Score=58.77 Aligned_cols=39 Identities=23% Similarity=0.229 Sum_probs=34.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.++..|||++||+|..+..+++. +.+++|+|+++.++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~------g~~~~g~e~~~~~~~~ 272 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW------GRRALGVELVPRYAQL 272 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT------TCEEEEEESCHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHH
Confidence 67899999999999999888775 5799999999988643
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.97 E-value=0.00041 Score=58.68 Aligned_cols=77 Identities=19% Similarity=0.145 Sum_probs=52.3
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-CCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-HCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
.+|+|+.||.|+++..+.+.-.. -..|+++|+++.++... .......++.+|+.++....+.. ..+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~---~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~-----~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIP---AQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDR-----LSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCS---EEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHH-----HCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCC---ceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCc-----CCcCEEEE
Confidence 47999999999999999887100 12699999999875441 12233456788988876443321 26999999
Q ss_pred CCCCCC
Q 038391 120 DMCPSV 125 (186)
Q Consensus 120 d~~~~~ 125 (186)
+.+|..
T Consensus 75 gpPCq~ 80 (343)
T 1g55_A 75 SPPCQP 80 (343)
T ss_dssp CCC---
T ss_pred cCCCcc
Confidence 987643
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.95 E-value=0.00028 Score=58.52 Aligned_cols=74 Identities=16% Similarity=0.127 Sum_probs=53.9
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC---Cc-CCCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVP---SL-HCDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~---~~-~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
+..+||+-+|+|.++..+.+. +.+++.+|.++..+. .+ ....++++++.|... .+..+..+..+||
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~------~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~----~L~~l~~~~~~fd 161 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS------QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVS----KLNALLPPPEKRG 161 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT------TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHH----HHHHHCSCTTSCE
T ss_pred CCCceeEeCCcHHHHHHHcCC------CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHH----HHHHhcCCCCCcc
Confidence 456899999999999998884 479999999997742 22 223568888887542 3344443456799
Q ss_pred EEEeCCCC
Q 038391 116 VILSDMCP 123 (186)
Q Consensus 116 ~V~~d~~~ 123 (186)
+|+.|++.
T Consensus 162 LVfiDPPY 169 (283)
T 2oo3_A 162 LIFIDPSY 169 (283)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999873
No 304
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.70 E-value=0.0019 Score=53.53 Aligned_cols=70 Identities=10% Similarity=0.102 Sum_probs=50.8
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSD 120 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d 120 (186)
+||||.||.|+++.-+-+. |. .|+++|+++.+.......-.-.++.+|+.++....+ ..+|+++..
T Consensus 2 kvidLFsG~GG~~~G~~~a------G~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~-------~~~D~l~gg 68 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA------GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEF-------PKCDGIIGG 68 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT------TCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGS-------CCCSEEECC
T ss_pred eEEEeCcCccHHHHHHHHC------CCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhC-------CcccEEEec
Confidence 6999999999999988775 34 578999999986542111123567899988765432 368999887
Q ss_pred CCCC
Q 038391 121 MCPS 124 (186)
Q Consensus 121 ~~~~ 124 (186)
.+|.
T Consensus 69 pPCQ 72 (331)
T 3ubt_Y 69 PPSQ 72 (331)
T ss_dssp CCGG
T ss_pred CCCC
Confidence 7653
No 305
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.53 E-value=0.032 Score=45.47 Aligned_cols=108 Identities=16% Similarity=0.122 Sum_probs=68.1
Q ss_pred CCEEEEEcccCChHHHHHHHH---hCCCCCCCeEEEEeCCCCCCCC----------------------------------
Q 038391 40 GSSVLDLGCAPGAWLQVACQS---LGPLDNGGSVVGIDVKKVKVPS---------------------------------- 82 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~---~~~~~~~~~v~gvDis~~~i~~---------------------------------- 82 (186)
.+.|+++|+-.|+.+..++.. +.+.+...+|+++|--+.+...
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 459999999999988886653 3221235799999944333210
Q ss_pred ---cC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCC
Q 038391 83 ---LH-CDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVN 158 (186)
Q Consensus 83 ---~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (186)
.. ...+++++.+++.+.....+.+. +..+||+|..|+. + .+-....++....
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~--~~~~~dlv~ID~D------~-------Y~~t~~~le~~~p--------- 205 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAEN--PQTVIALAYFDLD------L-------YEPTKAVLEAIRP--------- 205 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHC--TTCCEEEEEECCC------C-------HHHHHHHHHHHGG---------
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhC--CCCceEEEEEcCc------c-------cchHHHHHHHHHH---------
Confidence 00 13678999998865322222222 3467999999762 1 0113455666666
Q ss_pred CCCCCCCCcccccCcEEEEEEc
Q 038391 159 NSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 159 ~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.|+|||++++--+
T Consensus 206 ---------~l~~GGvIv~DD~ 218 (257)
T 3tos_A 206 ---------YLTKGSIVAFDEL 218 (257)
T ss_dssp ---------GEEEEEEEEESST
T ss_pred ---------HhCCCcEEEEcCC
Confidence 8999999998654
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.41 E-value=0.0018 Score=55.16 Aligned_cols=57 Identities=12% Similarity=-0.007 Sum_probs=45.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC---cCCCCCeEEEEeeecCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS---LHCDARVQTVSADVINL 99 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~---~~~~~~~~~~~~d~~~~ 99 (186)
++..|||+|+|+|.+|..+++... ..+|++||+.+..+.. .....+++++.+|+..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~----~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC----PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC----CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC----CCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 368999999999999999998753 2589999999987432 11346899999999654
No 307
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.28 E-value=0.0035 Score=52.07 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=55.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCe---EEEEeCCCCCCCC-cCCCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGS---VVGIDVKKVKVPS-LHCDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~---v~gvDis~~~i~~-~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
..-+++||.||.|+++..+.+. |.+ |+++|+++..... ........++.+|+.++....+..+ ..+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a------G~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~----~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL------GIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEW----GPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT------TBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHT----CCC
T ss_pred CCCEEEEeCcCccHHHHHHHHC------CCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhccc----CCc
Confidence 3458999999999999988876 333 5999999987543 1122344677899998876555432 479
Q ss_pred cEEEeCCCCC
Q 038391 115 SVILSDMCPS 124 (186)
Q Consensus 115 D~V~~d~~~~ 124 (186)
|+++...+|.
T Consensus 85 Dll~ggpPCQ 94 (295)
T 2qrv_A 85 DLVIGGSPCN 94 (295)
T ss_dssp SEEEECCCCG
T ss_pred CEEEecCCCc
Confidence 9999988764
No 308
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.22 E-value=0.0073 Score=50.54 Aligned_cols=103 Identities=16% Similarity=0.217 Sum_probs=57.4
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCC--eEEEEeCCCCC----CCC----------c----CCCC--CeEEEEeeec
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGG--SVVGIDVKKVK----VPS----------L----HCDA--RVQTVSADVI 97 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~--~v~gvDis~~~----i~~----------~----~~~~--~~~~~~~d~~ 97 (186)
.-+|||+|-|+|.......+.+...++.. +++.+|..+.. +.. . .... .+++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 34799999999987654443221001234 56677754422 000 0 0111 3445556654
Q ss_pred CCChhhHhhhCCCCCCccEEEeCC-CCCCC-CCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEE
Q 038391 98 NLPSNQVRALSPKQKGFSVILSDM-CPSVS-GITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHL 175 (186)
Q Consensus 98 ~~~~~~l~~~~~~~~~~D~V~~d~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~l 175 (186)
. .+..+ ...+||.++.|+ +|... .+| ....+..+.+ +++|||+|
T Consensus 177 ~----~l~~l--~~~~~Da~flDgFsP~kNPeLW----------s~e~f~~l~~------------------~~~pgg~l 222 (308)
T 3vyw_A 177 K----RIKEV--ENFKADAVFHDAFSPYKNPELW----------TLDFLSLIKE------------------RIDEKGYW 222 (308)
T ss_dssp H----HGGGC--CSCCEEEEEECCSCTTTSGGGG----------SHHHHHHHHT------------------TEEEEEEE
T ss_pred H----HHhhh--cccceeEEEeCCCCcccCcccC----------CHHHHHHHHH------------------HhCCCcEE
Confidence 3 22233 235899999997 22222 223 3367888887 99999998
Q ss_pred E
Q 038391 176 V 176 (186)
Q Consensus 176 v 176 (186)
+
T Consensus 223 a 223 (308)
T 3vyw_A 223 V 223 (308)
T ss_dssp E
T ss_pred E
Confidence 6
No 309
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.15 E-value=0.0059 Score=49.28 Aligned_cols=37 Identities=30% Similarity=0.334 Sum_probs=32.1
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKV 80 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i 80 (186)
++|..|||.+||+|..+..+.+. +.+++|+|+++..+
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~------gr~~ig~e~~~~~~ 247 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL------GRNFIGCDMNAEYV 247 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT------TCEEEEEESCHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHH
Confidence 78999999999999888887775 57999999998764
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.98 E-value=0.0026 Score=53.72 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=52.9
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-cCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-LHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSD 120 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d 120 (186)
+++|+.||.|+++.-+.+.--. ...|+++|+++...+- ........++.+|+.++....+. ...+|+++..
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~---~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~-----~~~~D~l~gg 76 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLD---GEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIK-----KWNVDTILMS 76 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCS---EEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHH-----HTTCCEEEEC
T ss_pred EEEEECcCccHHHHHHHHcCCC---ceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhc-----cCCCCEEEec
Confidence 7999999999999999876100 1358899999988543 12223345677899888765442 2368999998
Q ss_pred CCCC
Q 038391 121 MCPS 124 (186)
Q Consensus 121 ~~~~ 124 (186)
.+|.
T Consensus 77 pPCQ 80 (333)
T 4h0n_A 77 PPCQ 80 (333)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 7764
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.71 E-value=0.0053 Score=51.55 Aligned_cols=72 Identities=10% Similarity=0.094 Sum_probs=49.2
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
+.+++||+||.|+++..+.+. +-..|+++|+++..+.... ...... .+|+.++....+ ..+|+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-----G~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~-------~~~D~l~ 76 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-----GAECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTI-------PDHDILC 76 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-----TCEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGS-------CCCSEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-----CCeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhC-------CCCCEEE
Confidence 468999999999999999876 1246889999998754310 001111 578777654322 3599999
Q ss_pred eCCCCCC
Q 038391 119 SDMCPSV 125 (186)
Q Consensus 119 ~d~~~~~ 125 (186)
.+.+|..
T Consensus 77 ~gpPCQ~ 83 (327)
T 2c7p_A 77 AGFPCQA 83 (327)
T ss_dssp EECCCTT
T ss_pred ECCCCCC
Confidence 9887643
No 312
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.67 E-value=0.0037 Score=52.64 Aligned_cols=78 Identities=6% Similarity=-0.043 Sum_probs=51.9
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeE-EEEeCCCCCCCCcC-CCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSV-VGIDVKKVKVPSLH-CDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v-~gvDis~~~i~~~~-~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
.-+++|+.||.|+++..+.+.--. ...| +++|+++....-.. ..... ++++|+.++....+.. ..+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~---~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~-----~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSIN---INATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIES-----LNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCC---CCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHH-----TCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCC---ceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhcc-----CCCCEE
Confidence 348999999999999998875100 1246 79999998754311 11111 5578888877654422 269999
Q ss_pred EeCCCCCCC
Q 038391 118 LSDMCPSVS 126 (186)
Q Consensus 118 ~~d~~~~~~ 126 (186)
+...+|..-
T Consensus 81 ~ggpPCQ~f 89 (327)
T 3qv2_A 81 FMSPPCQPY 89 (327)
T ss_dssp EECCCCTTC
T ss_pred EecCCccCc
Confidence 998776543
No 313
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.63 E-value=0.0083 Score=51.11 Aligned_cols=76 Identities=22% Similarity=0.298 Sum_probs=48.0
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC--hhhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP--SNQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~--~~~l~~~~~~~~ 112 (186)
.+++|++||.+|||+ |..+..+++.++. .+|+++|.++..++..... ...++ |..+.. ...+..+. .+.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~l-Ga~~i--~~~~~~~~~~~~~~~~-~g~ 253 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGA----ACVIVGDQNPERLKLLSDA-GFETI--DLRNSAPLRDQIDQIL-GKP 253 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTC----SEEEEEESCHHHHHHHHTT-TCEEE--ETTSSSCHHHHHHHHH-SSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEEcCCHHHHHHHHHc-CCcEE--cCCCcchHHHHHHHHh-CCC
Confidence 478899999999876 7777788887631 3899999998775542221 12222 332222 22333333 234
Q ss_pred CccEEEe
Q 038391 113 GFSVILS 119 (186)
Q Consensus 113 ~~D~V~~ 119 (186)
.+|+|+-
T Consensus 254 g~Dvvid 260 (398)
T 2dph_A 254 EVDCGVD 260 (398)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 314
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.0087 Score=50.37 Aligned_cols=104 Identities=13% Similarity=0.220 Sum_probs=62.1
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQK 112 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~ 112 (186)
..+++|++||-+|||+ |.....+++.++. .+|+++|.++..++......--.++ |..+.. ...+.++.. +
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga----~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~~~~~~-g- 257 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCGA----SIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIKEITD-G- 257 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHTC----SEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTT-S-
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEECCCHHHHHHHHHcCCCEEe--cCCccCHHHHHHHhcC-C-
Confidence 3478899999999876 6777777777631 3799999998775442111101111 222222 123444432 3
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.+|+|+.. .+. ...+..+.+ .|+++|++++--..
T Consensus 258 g~D~vid~-----~g~------------~~~~~~~~~------------------~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 258 GVNFALES-----TGS------------PEILKQGVD------------------ALGILGKIAVVGAP 291 (371)
T ss_dssp CEEEEEEC-----SCC------------HHHHHHHHH------------------TEEEEEEEEECCCC
T ss_pred CCcEEEEC-----CCC------------HHHHHHHHH------------------HHhcCCEEEEeCCC
Confidence 79999872 221 124455555 89999999875443
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.39 E-value=0.011 Score=49.41 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |..+..+++.. +.+|+++|.++..++.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~ 215 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-----GAEVSVFARNEHKKQD 215 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-----TCEEEEECSSSTTHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-----CCeEEEEeCCHHHHHH
Confidence 478999999999865 66666677665 5699999999988654
No 316
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.27 E-value=0.01 Score=49.76 Aligned_cols=42 Identities=24% Similarity=0.404 Sum_probs=32.4
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |..+..+++.+ +. +|+++|.++..++.
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~ 211 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAM-----GAAQVVVTDLSATRLSK 211 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEEESCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHH
Confidence 478899999999875 66667777765 35 89999999876543
No 317
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.26 E-value=0.04 Score=46.42 Aligned_cols=104 Identities=20% Similarity=0.278 Sum_probs=63.5
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeec--CCC-hhhHhhhCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVI--NLP-SNQVRALSPK 110 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~--~~~-~~~l~~~~~~ 110 (186)
..+++|++||-+|+|+ |..+..+++..+. .+|+++|.++..++......-..+ .|.. ... ...+.++..
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga----~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAGA----SRIIGIDIDSKKYETAKKFGVNEF--VNPKDHDKPIQEVIVDLTD- 261 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHTC----SCEEEECSCTTHHHHHHTTTCCEE--ECGGGCSSCHHHHHHHHTT-
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEEcCCHHHHHHHHHcCCcEE--EccccCchhHHHHHHHhcC-
Confidence 3478899999999875 6777777777632 389999999988654322111111 2222 111 233444442
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccC-cEEEEEEcc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPG-GHLVIKLLE 181 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~~~ 181 (186)
+.+|+|+-. .+. ...+..+.+ .|++| |++++--..
T Consensus 262 -gg~D~vid~-----~g~------------~~~~~~~~~------------------~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 262 -GGVDYSFEC-----IGN------------VSVMRAALE------------------CCHKGWGTSVIVGVA 297 (378)
T ss_dssp -SCBSEEEEC-----SCC------------HHHHHHHHH------------------TBCTTTCEEEECSCC
T ss_pred -CCCCEEEEC-----CCC------------HHHHHHHHH------------------HhhccCCEEEEEccc
Confidence 389999872 221 134555555 89996 998875543
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.23 E-value=0.016 Score=48.41 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |..+..+++.+ +.+|+++|.++..++.
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~ 207 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAY-----GAFVVCTARSPRRLEV 207 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEcCCHHHHHH
Confidence 368899999999864 55666666665 4679999998877543
No 319
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.17 E-value=0.016 Score=47.64 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=41.1
Q ss_pred CeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCccc---------chHHHHHHHHHHHHHHcCCcccCCCCC
Q 038391 88 RVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTK---------DAALSVELGMRAVDLALGPAALASPVN 158 (186)
Q Consensus 88 ~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (186)
+.+++++|+.+. +..+ ++++||+|++|++......... ....-......++.++.+
T Consensus 21 ~~~i~~gD~~~~----l~~l--~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~r--------- 85 (297)
T 2zig_A 21 VHRLHVGDAREV----LASF--PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFR--------- 85 (297)
T ss_dssp CEEEEESCHHHH----HTTS--CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CCEEEECcHHHH----HhhC--CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHH---------
Confidence 568889988652 1111 3579999999987543211100 011112223456677777
Q ss_pred CCCCCCCCcccccCcEEEEEE
Q 038391 159 NSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 159 ~~~~~~~~~~LkpgG~lvi~~ 179 (186)
+|||||.+++.+
T Consensus 86 ---------vLk~~G~l~i~~ 97 (297)
T 2zig_A 86 ---------LLVPGGRLVIVV 97 (297)
T ss_dssp ---------HEEEEEEEEEEE
T ss_pred ---------HcCCCcEEEEEE
Confidence 999999998875
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.12 E-value=0.018 Score=43.77 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=42.9
Q ss_pred CCCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~ 111 (186)
..+++|++||..|++ .|.....++... +.+|+++|.++..++..... .... ..|..+... ..+.+... +
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~~V~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~-~ 105 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMI-----GARIYTTAGSDAKREMLSRL-GVEY-VGDSRSVDFADEILELTD-G 105 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHTT-CCSE-EEETTCSTHHHHHHHHTT-T
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHc-CCCE-EeeCCcHHHHHHHHHHhC-C
Confidence 347889999999853 244444444443 57999999987664321111 1111 124433321 23333332 3
Q ss_pred CCccEEEeC
Q 038391 112 KGFSVILSD 120 (186)
Q Consensus 112 ~~~D~V~~d 120 (186)
..+|+++.+
T Consensus 106 ~~~D~vi~~ 114 (198)
T 1pqw_A 106 YGVDVVLNS 114 (198)
T ss_dssp CCEEEEEEC
T ss_pred CCCeEEEEC
Confidence 479999974
No 321
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.08 E-value=0.0098 Score=49.49 Aligned_cols=104 Identities=17% Similarity=0.267 Sum_probs=63.3
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCc
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGF 114 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 114 (186)
.+++|++||-+|+|+ |..+..+++..+ +.+|+++|.+++.++......-..++ |........+.++. .+..+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g----~~~Vi~~~~~~~~~~~~~~lGa~~~i--~~~~~~~~~v~~~t-~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS----AARVIAVDLDDDRLALAREVGADAAV--KSGAGAADAIRELT-GGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC----CCEEEEEESCHHHHHHHHHTTCSEEE--ECSTTHHHHHHHHH-GGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHcCCCEEE--cCCCcHHHHHHHHh-CCCCC
Confidence 478899999999875 667777777763 47999999999875542211111122 11111122333333 24589
Q ss_pred cEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 115 SVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 115 D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
|+|+-. .+. ...+..+.+ .|+++|++++--..
T Consensus 241 d~v~d~-----~G~------------~~~~~~~~~------------------~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 241 TAVFDF-----VGA------------QSTIDTAQQ------------------VVAVDGHISVVGIH 272 (345)
T ss_dssp EEEEES-----SCC------------HHHHHHHHH------------------HEEEEEEEEECSCC
T ss_pred eEEEEC-----CCC------------HHHHHHHHH------------------HHhcCCEEEEECCC
Confidence 999872 221 124555555 89999999876443
No 322
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.06 E-value=0.028 Score=46.81 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=44.8
Q ss_pred CCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCC---cccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCC
Q 038391 87 ARVQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGI---TTKDAALSVELGMRAVDLALGPAALASPVNNSDSS 163 (186)
Q Consensus 87 ~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (186)
.+..++++|+... +..+ ++++||+|++|++...... ....+..-.......+.++.+
T Consensus 13 ~~~~ii~gD~~~~----l~~l--~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~r-------------- 72 (323)
T 1boo_A 13 SNGSMYIGDSLEL----LESF--PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNK-------------- 72 (323)
T ss_dssp SSEEEEESCHHHH----GGGS--CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHH--------------
T ss_pred CCceEEeCcHHHH----HhhC--CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHH--------------
Confidence 4577888987642 1112 4679999999987644321 111122223345677777777
Q ss_pred CCCcccccCcEEEEEEc
Q 038391 164 TDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 164 ~~~~~LkpgG~lvi~~~ 180 (186)
+|||||.+++.+=
T Consensus 73 ----vLk~~G~i~i~~~ 85 (323)
T 1boo_A 73 ----KLKPDGSFVVDFG 85 (323)
T ss_dssp ----HEEEEEEEEEEEC
T ss_pred ----HCcCCcEEEEEEC
Confidence 9999999998753
No 323
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.99 E-value=0.023 Score=46.95 Aligned_cols=103 Identities=21% Similarity=0.174 Sum_probs=62.0
Q ss_pred HcCCCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-CCCCCeEEEEeeecCCC-hhhHhhhC
Q 038391 33 QYKLIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-HCDARVQTVSADVINLP-SNQVRALS 108 (186)
Q Consensus 33 ~~~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-~~~~~~~~~~~d~~~~~-~~~l~~~~ 108 (186)
....+++|++||-.|++ .|..+..+++.. +.+|+++|.++..++.. ... .... ..|..+.. ...+.+..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK-----GCRVVGIAGGAEKCRFLVEEL-GFDG-AIDYKNEDLAAGLKREC 215 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHTT-CCSE-EEETTTSCHHHHHHHHC
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHc-CCCE-EEECCCHHHHHHHHHhc
Confidence 33457899999999983 355666666654 57999999988765432 111 1111 12333322 12344443
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++.+|+|+... +. ..+..+.+ .|+++|++++--.
T Consensus 216 --~~~~d~vi~~~-----g~-------------~~~~~~~~------------------~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 216 --PKGIDVFFDNV-----GG-------------EILDTVLT------------------RIAFKARIVLCGA 249 (336)
T ss_dssp --TTCEEEEEESS-----CH-------------HHHHHHHT------------------TEEEEEEEEECCC
T ss_pred --CCCceEEEECC-----Cc-------------chHHHHHH------------------HHhhCCEEEEEee
Confidence 35799998732 21 24555566 8999999987543
No 324
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.98 E-value=0.19 Score=38.16 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=52.5
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
..-|||+|-|+|..--++.+.++ +-.|+.+|-.-..-...- -+.-.++++|+.......++.+ +.+.-++.+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P----~R~I~vfDR~~~~hp~~~-P~~e~~ilGdi~~tL~~~~~r~---g~~a~LaHa 112 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQ----GREIYVFERAVASHPDST-PPEAQLILGDIRETLPATLERF---GATASLVHA 112 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCC----SSCEEEEESSCCCCGGGC-CCGGGEEESCHHHHHHHHHHHH---CSCEEEEEE
T ss_pred CCceEEecCCCChhHHHHHHhCC----CCcEEEEEeeeccCCCCC-CchHheecccHHHHHHHHHHhc---CCceEEEEe
Confidence 45899999999999999999986 489999997655432211 1234678898875432222223 568889999
Q ss_pred CCC
Q 038391 120 DMC 122 (186)
Q Consensus 120 d~~ 122 (186)
|..
T Consensus 113 D~G 115 (174)
T 3iht_A 113 DLG 115 (174)
T ss_dssp CCC
T ss_pred ecC
Confidence 863
No 325
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.93 E-value=0.012 Score=48.96 Aligned_cols=42 Identities=21% Similarity=0.284 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-.|+|+ |..+..+++.. +.+|+++|.++..++.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~ 205 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM-----GLRVAAVDIDDAKLNL 205 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT-----TCEEEEEESCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-----CCeEEEEeCCHHHHHH
Confidence 478899999999976 77777788776 4699999999877544
No 326
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.93 E-value=0.031 Score=46.38 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=47.7
Q ss_pred CCCCCCCEEEEEcccC--ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCC-CCCeEEEEeeecCCC-hhhHhhhCCC
Q 038391 35 KLIKPGSSVLDLGCAP--GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHC-DARVQTVSADVINLP-SNQVRALSPK 110 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~--G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~-~~~~~~~~~d~~~~~-~~~l~~~~~~ 110 (186)
..+++|++||-.|+|. |..+..+++.. +.+|+++|.++..++.... ... .. .|..+.. ...+.++. .
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~lga~-~~--~~~~~~~~~~~~~~~~-~ 210 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQIL-----NFRLIAVTRNNKHTEELLRLGAA-YV--IDTSTAPLYETVMELT-N 210 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEESSSTTHHHHHHHTCS-EE--EETTTSCHHHHHHHHT-T
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhCCCc-EE--EeCCcccHHHHHHHHh-C
Confidence 4578899999999874 66777777765 5799999999887544211 111 11 1322222 12334443 2
Q ss_pred CCCccEEEe
Q 038391 111 QKGFSVILS 119 (186)
Q Consensus 111 ~~~~D~V~~ 119 (186)
+..+|+|+.
T Consensus 211 ~~g~Dvvid 219 (340)
T 3gms_A 211 GIGADAAID 219 (340)
T ss_dssp TSCEEEEEE
T ss_pred CCCCcEEEE
Confidence 458999987
No 327
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.78 E-value=0.02 Score=47.46 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=61.2
Q ss_pred CCCCCCEEEEEcccCC-hHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCCC
Q 038391 36 LIKPGSSVLDLGCAPG-AWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQKG 113 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~G-~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~~ 113 (186)
.+++|++||-+|+|++ .+...+++..+ +.+|+++|.++..+.......-..++ |..+.. ...+.+.. .+..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~----g~~Vi~~~~~~~r~~~~~~~Ga~~~i--~~~~~~~~~~v~~~t-~g~g 232 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF----GAKVIAVDINQDKLNLAKKIGADVTI--NSGDVNPVDEIKKIT-GGLG 232 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS----CCEEEEEESCHHHHHHHHHTTCSEEE--EC-CCCHHHHHHHHT-TSSC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC----CCEEEEEECcHHHhhhhhhcCCeEEE--eCCCCCHHHHhhhhc-CCCC
Confidence 3688999999999874 45555555543 57999999999875432211111111 222222 23344444 3557
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
+|.++.+. + ....+..+.+ .|+++|++++....
T Consensus 233 ~d~~~~~~-----~------------~~~~~~~~~~------------------~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 233 VQSAIVCA-----V------------ARIAFEQAVA------------------SLKPMGKMVAVAVP 265 (348)
T ss_dssp EEEEEECC-----S------------CHHHHHHHHH------------------TEEEEEEEEECCCC
T ss_pred ceEEEEec-----c------------Ccchhheehe------------------eecCCceEEEEecc
Confidence 88887632 1 1134455555 89999998876543
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.69 E-value=0.061 Score=45.15 Aligned_cols=77 Identities=18% Similarity=0.297 Sum_probs=46.0
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecC--CC-hhhHhhhCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVIN--LP-SNQVRALSPK 110 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~--~~-~~~l~~~~~~ 110 (186)
..+++|++||-+|+|+ |..+..+++.++. .+|+++|.++..++...... ...+ .|..+ .. ...+.+...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~lG-a~~v-i~~~~~~~~~~~~i~~~t~- 259 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGA----SRIIGVGTHKDKFPKAIELG-ATEC-LNPKDYDKPIYEVICEKTN- 259 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTC----SEEEEECSCGGGHHHHHHTT-CSEE-ECGGGCSSCHHHHHHHHTT-
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEECCCHHHHHHHHHcC-CcEE-EecccccchHHHHHHHHhC-
Confidence 3478899999999865 6666777777631 38999999988754422111 1111 12221 11 223444432
Q ss_pred CCCccEEEe
Q 038391 111 QKGFSVILS 119 (186)
Q Consensus 111 ~~~~D~V~~ 119 (186)
+.+|+|+-
T Consensus 260 -gg~Dvvid 267 (373)
T 1p0f_A 260 -GGVDYAVE 267 (373)
T ss_dssp -SCBSEEEE
T ss_pred -CCCCEEEE
Confidence 38999987
No 329
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.64 E-value=0.039 Score=45.89 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=59.4
Q ss_pred CCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecC-CC-hhhHhhhCCCC
Q 038391 36 LIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVIN-LP-SNQVRALSPKQ 111 (186)
Q Consensus 36 ~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~-~~-~~~l~~~~~~~ 111 (186)
.+++|++||-.|++ .|..+..++... +.+|+++|.++..++..... .... ..|..+ .. ...+..... +
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----Ga~V~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~-~ 237 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-----GYRVLGIDGGEGKEELFRSI-GGEV-FIDFTKEKDIVGAVLKATD-G 237 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-----TCEEEEEECSTTHHHHHHHT-TCCE-EEETTTCSCHHHHHHHHHT-S
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-----CCcEEEEcCCHHHHHHHHHc-CCce-EEecCccHhHHHHHHHHhC-C
Confidence 47889999999983 345555555543 57999999988765432111 1111 124432 22 122333322 3
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
.+|+|+... +. ...+..+.+ .|+++|++++--.
T Consensus 238 -~~D~vi~~~-----g~------------~~~~~~~~~------------------~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 238 -GAHGVINVS-----VS------------EAAIEASTR------------------YVRANGTTVLVGM 270 (347)
T ss_dssp -CEEEEEECS-----SC------------HHHHHHHTT------------------SEEEEEEEEECCC
T ss_pred -CCCEEEECC-----Cc------------HHHHHHHHH------------------HHhcCCEEEEEeC
Confidence 799999743 21 135566676 8999999886543
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.38 E-value=0.073 Score=44.66 Aligned_cols=76 Identities=17% Similarity=0.343 Sum_probs=45.2
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCCcCCCCCeEEEEeeecC--CC-hhhHhhhCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPSLHCDARVQTVSADVIN--LP-SNQVRALSP 109 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~~~~~~~~~~~~~d~~~--~~-~~~l~~~~~ 109 (186)
..+++|++||-+|+|+ |.....+++.+ +. +|+++|.++..++......--.+ .|..+ .. ...+.++..
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAA-----GAARIIGVDINKDKFAKAKEVGATEC--VNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEECSCGGGHHHHHHTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEEcCCHHHHHHHHHhCCceE--ecccccchhHHHHHHHHhC
Confidence 3478899999999765 55666666665 35 89999999887544221110111 23322 11 123444432
Q ss_pred CCCCccEEEe
Q 038391 110 KQKGFSVILS 119 (186)
Q Consensus 110 ~~~~~D~V~~ 119 (186)
+.+|+|+.
T Consensus 260 --~g~D~vid 267 (374)
T 2jhf_A 260 --GGVDFSFE 267 (374)
T ss_dssp --SCBSEEEE
T ss_pred --CCCcEEEE
Confidence 37999987
No 331
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.38 E-value=0.066 Score=44.93 Aligned_cols=43 Identities=23% Similarity=0.480 Sum_probs=32.5
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPS 82 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~ 82 (186)
..+++|++||-+|+|+ |..+..+++.+ +. +|+++|.++..++.
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~~Vi~~~~~~~~~~~ 232 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSA-----GAKRIIAVDLNPDKFEK 232 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEECSCGGGHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEEcCCHHHHHH
Confidence 3478899999999764 55666666665 35 89999999887554
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.36 E-value=0.066 Score=44.96 Aligned_cols=43 Identities=26% Similarity=0.511 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPS 82 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~ 82 (186)
..+++|++||-+|+|+ |..+..+++.+ +. +|+++|.++..++.
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~ 235 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIA-----GASRIIAIDINGEKFPK 235 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEECSCGGGHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEEcCCHHHHHH
Confidence 3478899999999865 56666677765 35 89999999887544
No 333
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.35 E-value=0.036 Score=45.84 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=62.0
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQK 112 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~~ 112 (186)
..+++|++||-.|+|+ |.++..+++.++ ...++++|.++..++..+...-... .|..+... +.+..+. ..+
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G----~~~vi~~~~~~~k~~~a~~lGa~~~--i~~~~~~~~~~~~~~~-~~~ 228 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALG----AKSVTAIDISSEKLALAKSFGAMQT--FNSSEMSAPQMQSVLR-ELR 228 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTT----CSEEEEEESCHHHHHHHHHTTCSEE--EETTTSCHHHHHHHHG-GGC
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcC----CcEEEEEechHHHHHHHHHcCCeEE--EeCCCCCHHHHHHhhc-ccC
Confidence 3468899999999876 456666677764 2467899999887544221111112 23333322 2222332 246
Q ss_pred CccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 113 GFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 113 ~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
.+|+|+.. .+ ....++.+.+ +|+++|++++--..+
T Consensus 229 g~d~v~d~-----~G------------~~~~~~~~~~------------------~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 229 FNQLILET-----AG------------VPQTVELAVE------------------IAGPHAQLALVGTLH 263 (346)
T ss_dssp SSEEEEEC-----SC------------SHHHHHHHHH------------------HCCTTCEEEECCCCS
T ss_pred Cccccccc-----cc------------ccchhhhhhh------------------eecCCeEEEEEeccC
Confidence 78988862 22 1134555555 899999998765443
No 334
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.31 E-value=0.024 Score=48.09 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=47.3
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC--hhhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP--SNQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~--~~~l~~~~~~~~ 112 (186)
.+++|++||-+|||+ |.++..+++.++. .+|+++|.++..++..... .... .|..+.. ...+.++. .+.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga----~~Vi~~~~~~~~~~~a~~l-Ga~~--i~~~~~~~~~~~v~~~t-~g~ 253 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGA----AVVIVGDLNPARLAHAKAQ-GFEI--ADLSLDTPLHEQIAALL-GEP 253 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEEESCHHHHHHHHHT-TCEE--EETTSSSCHHHHHHHHH-SSS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC----CeEEEEcCCHHHHHHHHHc-CCcE--EccCCcchHHHHHHHHh-CCC
Confidence 478899999999876 6677777777631 3799999998775542211 1222 2332221 22333333 245
Q ss_pred CccEEEeC
Q 038391 113 GFSVILSD 120 (186)
Q Consensus 113 ~~D~V~~d 120 (186)
.+|+|+-.
T Consensus 254 g~Dvvid~ 261 (398)
T 1kol_A 254 EVDCAVDA 261 (398)
T ss_dssp CEEEEEEC
T ss_pred CCCEEEEC
Confidence 79999873
No 335
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.28 E-value=0.084 Score=43.62 Aligned_cols=100 Identities=19% Similarity=0.230 Sum_probs=59.8
Q ss_pred CCCCCCCEEEEEcc--cCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcC--CCCCeEEEEeeecCC-C-hhhHhhhC
Q 038391 35 KLIKPGSSVLDLGC--APGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLH--CDARVQTVSADVINL-P-SNQVRALS 108 (186)
Q Consensus 35 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~--~~~~~~~~~~d~~~~-~-~~~l~~~~ 108 (186)
..+++|++||-.|+ |.|.....+++.. +.+|+++|.++..++... .... . ..|..+. . ...+....
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-----G~~V~~~~~~~~~~~~~~~~~g~~--~-~~d~~~~~~~~~~~~~~~ 222 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMM-----GCYVVGSAGSKEKVDLLKTKFGFD--D-AFNYKEESDLTAALKRCF 222 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHTSCCS--E-EEETTSCSCSHHHHHHHC
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHcCCc--e-EEecCCHHHHHHHHHHHh
Confidence 34788999999997 2355555555554 579999999876644321 2111 1 1243332 1 22344443
Q ss_pred CCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 109 PKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
++.+|+|+... + . ..+..+.+ .|+++|++++--.
T Consensus 223 --~~~~d~vi~~~-----g------------~-~~~~~~~~------------------~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 223 --PNGIDIYFENV-----G------------G-KMLDAVLV------------------NMNMHGRIAVCGM 256 (345)
T ss_dssp --TTCEEEEEESS-----C------------H-HHHHHHHT------------------TEEEEEEEEECCC
T ss_pred --CCCCcEEEECC-----C------------H-HHHHHHHH------------------HHhcCCEEEEEcc
Confidence 25799999732 2 1 24555566 8999999987543
No 336
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.26 E-value=0.0072 Score=50.52 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=45.3
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~ 111 (186)
..+++|++||-+|+|+ |..+..+++.. +. +|+++|.++..++......-..+ .|..+.. ...+.+.. .+
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~v~~~t-~g 233 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHL-----GAGRIFAVGSRKHCCDIALEYGATDI--INYKNGDIVEQILKAT-DG 233 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTT-----TCSSEEEECCCHHHHHHHHHHTCCEE--ECGGGSCHHHHHHHHT-TT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCcEEEEECCCHHHHHHHHHhCCceE--EcCCCcCHHHHHHHHc-CC
Confidence 3478899999999865 56666666665 34 89999998876443211100111 1222222 12344444 35
Q ss_pred CCccEEEe
Q 038391 112 KGFSVILS 119 (186)
Q Consensus 112 ~~~D~V~~ 119 (186)
..+|+|+-
T Consensus 234 ~g~D~v~d 241 (352)
T 3fpc_A 234 KGVDKVVI 241 (352)
T ss_dssp CCEEEEEE
T ss_pred CCCCEEEE
Confidence 57999986
No 337
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.25 E-value=0.051 Score=44.78 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=58.2
Q ss_pred CCCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecC-CCh-hhHhhhCCC
Q 038391 35 KLIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVIN-LPS-NQVRALSPK 110 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~-~~~-~~l~~~~~~ 110 (186)
..++++++||-.||+ .|..+..++... +.+|+++|.++..++..... ... ...|..+ ... ..+....
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~~V~~~~~~~~~~~~~~~~-g~~-~~~d~~~~~~~~~~~~~~~-- 211 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLK-----GCKVVGAAGSDEKIAYLKQI-GFD-AAFNYKTVNSLEEALKKAS-- 211 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHT-TCS-EEEETTSCSCHHHHHHHHC--
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHhc-CCc-EEEecCCHHHHHHHHHHHh--
Confidence 347889999999983 344444445443 57999999987664332111 111 1234443 221 2333333
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
.+.+|+++.+. |. ..+..+.+ .|+++|++++--
T Consensus 212 ~~~~d~vi~~~-----g~-------------~~~~~~~~------------------~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 PDGYDCYFDNV-----GG-------------EFLNTVLS------------------QMKDFGKIAICG 244 (333)
T ss_dssp TTCEEEEEESS-----CH-------------HHHHHHHT------------------TEEEEEEEEECC
T ss_pred CCCCeEEEECC-----Ch-------------HHHHHHHH------------------HHhcCCEEEEEe
Confidence 24799999843 20 12455566 899999998654
No 338
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.24 E-value=0.01 Score=49.90 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=45.7
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQK 112 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~ 112 (186)
..+++|++||-+|+|+ |..+..+++.. +.+|+++|.++..++......--..+ |-.... ...+.... .+.
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~v~~~~-~g~ 256 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT-----GAEVIVTSSSREKLDRAFALGADHGI--NRLEEDWVERVYALT-GDR 256 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHH-TTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEecCchhHHHHHHcCCCEEE--cCCcccHHHHHHHHh-CCC
Confidence 4478899999999775 66666777765 57999999988765432111101111 211111 12333333 245
Q ss_pred CccEEEe
Q 038391 113 GFSVILS 119 (186)
Q Consensus 113 ~~D~V~~ 119 (186)
.+|+|+.
T Consensus 257 g~D~vid 263 (363)
T 3uog_A 257 GADHILE 263 (363)
T ss_dssp CEEEEEE
T ss_pred CceEEEE
Confidence 8999987
No 339
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.22 E-value=0.044 Score=45.81 Aligned_cols=106 Identities=17% Similarity=0.211 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCe-EEEEeCCCCCCCCcC-CCCCeEEEEeeecC-CC-hhhHhhhCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGS-VVGIDVKKVKVPSLH-CDARVQTVSADVIN-LP-SNQVRALSPK 110 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~-v~gvDis~~~i~~~~-~~~~~~~~~~d~~~-~~-~~~l~~~~~~ 110 (186)
.+++|++||-+|+|+ |..+..+++.. +.+ |+++|.++..++... ....+.....+..+ .. ...+.+.. .
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t-~ 249 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAA-----GACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESF-G 249 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHT-----TCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHT-S
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHh-C
Confidence 378899999999865 66667777765 354 999999987754321 11122222221100 00 12333333 2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+..+|+|+-. .+. ...+..+.+ .|+++|++++--...
T Consensus 250 g~g~Dvvid~-----~g~------------~~~~~~~~~------------------~l~~~G~iv~~G~~~ 286 (363)
T 3m6i_A 250 GIEPAVALEC-----TGV------------ESSIAAAIW------------------AVKFGGKVFVIGVGK 286 (363)
T ss_dssp SCCCSEEEEC-----SCC------------HHHHHHHHH------------------HSCTTCEEEECCCCC
T ss_pred CCCCCEEEEC-----CCC------------hHHHHHHHH------------------HhcCCCEEEEEccCC
Confidence 5689999872 221 124455555 899999999765443
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.14 E-value=0.073 Score=44.58 Aligned_cols=43 Identities=26% Similarity=0.532 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPS 82 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~ 82 (186)
..+++|++||-+|+|+ |..+..+++.+ +. +|+++|.++..++.
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~-----Ga~~Vi~~~~~~~~~~~ 230 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVA-----GASRIIGVDINKDKFAR 230 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHH-----TCSEEEEECSCGGGHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEEcCCHHHHHH
Confidence 3478899999999765 56666677766 35 89999999887544
No 341
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.11 E-value=0.077 Score=44.54 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=58.0
Q ss_pred CCCEEEEEc-ccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 39 PGSSVLDLG-CAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 39 ~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+|++||-.| +|+ |..+..+++.++ +.+|+++|.++..++......--.++ |..+.....+.++ .++.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~----g~~Vi~~~~~~~~~~~~~~lGad~vi--~~~~~~~~~v~~~--~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT----DLTVIATASRPETQEWVKSLGAHHVI--DHSKPLAAEVAAL--GLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC----CSEEEEECSSHHHHHHHHHTTCSEEE--CTTSCHHHHHHTT--CSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc----CCEEEEEeCCHHHHHHHHHcCCCEEE--eCCCCHHHHHHHh--cCCCceE
Confidence 788999998 554 777777887653 57999999988764432111101111 2221112233333 3468999
Q ss_pred EEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEE
Q 038391 117 ILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIK 178 (186)
Q Consensus 117 V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~ 178 (186)
|+.. .+ ....+..+.+ .|+++|++++-
T Consensus 243 vid~-----~g------------~~~~~~~~~~------------------~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFST-----TH------------TDKHAAEIAD------------------LIAPQGRFCLI 269 (363)
T ss_dssp EEEC-----SC------------HHHHHHHHHH------------------HSCTTCEEEEC
T ss_pred EEEC-----CC------------chhhHHHHHH------------------HhcCCCEEEEE
Confidence 9872 22 1234555555 89999999864
No 342
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.08 E-value=0.035 Score=46.13 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=43.1
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~ 112 (186)
.+ +|++||-+|+|. |..+..+++.+ +. +|+++|.++..++....... .+ .|..+.. ...+.++. +.
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~-----Ga~~Vi~~~~~~~~~~~~~~la~-~v--~~~~~~~~~~~~~~~~--~~ 230 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRAS-----GAGPILVSDPNPYRLAFARPYAD-RL--VNPLEEDLLEVVRRVT--GS 230 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHT-----TCCSEEEECSCHHHHGGGTTTCS-EE--ECTTTSCHHHHHHHHH--SS
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHHHHHhHH-hc--cCcCccCHHHHHHHhc--CC
Confidence 35 899999999854 55556666665 45 89999998876544222111 11 2222222 12333333 45
Q ss_pred CccEEEe
Q 038391 113 GFSVILS 119 (186)
Q Consensus 113 ~~D~V~~ 119 (186)
.+|+|+.
T Consensus 231 g~D~vid 237 (343)
T 2dq4_A 231 GVEVLLE 237 (343)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 343
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.06 E-value=0.033 Score=46.32 Aligned_cols=80 Identities=14% Similarity=0.197 Sum_probs=47.0
Q ss_pred HcCCCCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCC
Q 038391 33 QYKLIKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPK 110 (186)
Q Consensus 33 ~~~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 110 (186)
....+++|++||-.|+ | .|..+..+++.. +.+|++++.++..++......--.++ |........+.+.. .
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~ga~~v~--~~~~~~~~~v~~~~-~ 224 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-----GAKVIAVVNRTAATEFVKSVGADIVL--PLEEGWAKAVREAT-G 224 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSGGGHHHHHHHTCSEEE--ESSTTHHHHHHHHT-T
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhcCCcEEe--cCchhHHHHHHHHh-C
Confidence 3345788999999997 3 366677777765 57999999988775432111111112 22211122333443 2
Q ss_pred CCCccEEEeC
Q 038391 111 QKGFSVILSD 120 (186)
Q Consensus 111 ~~~~D~V~~d 120 (186)
+..+|+|+..
T Consensus 225 ~~g~Dvvid~ 234 (342)
T 4eye_A 225 GAGVDMVVDP 234 (342)
T ss_dssp TSCEEEEEES
T ss_pred CCCceEEEEC
Confidence 4579999973
No 344
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.02 E-value=0.026 Score=46.55 Aligned_cols=103 Identities=19% Similarity=0.193 Sum_probs=61.3
Q ss_pred CCCCCCCEEEEEc-cc-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLG-CA-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~ 111 (186)
..+++|++||-.| +| .|..+..+++.. +.+|++++.++..++......-... .|..+.. ...+.+.. .+
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~~~~~~-~~ 207 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKAL-----GAKLIGTVSSPEKAAHAKALGAWET--IDYSHEDVAKRVLELT-DG 207 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHT-TT
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHcCCCEE--EeCCCccHHHHHHHHh-CC
Confidence 3478899999998 34 366667777765 5799999998876543211110111 2322222 12333443 24
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
..+|+|+... +. ..+..+.+ .|+++|++++--..
T Consensus 208 ~g~Dvvid~~-----g~-------------~~~~~~~~------------------~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 208 KKCPVVYDGV-----GQ-------------DTWLTSLD------------------SVAPRGLVVSFGNA 241 (325)
T ss_dssp CCEEEEEESS-----CG-------------GGHHHHHT------------------TEEEEEEEEECCCT
T ss_pred CCceEEEECC-----Ch-------------HHHHHHHH------------------HhcCCCEEEEEecC
Confidence 6899998732 21 13344455 89999999876544
No 345
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=93.86 E-value=0.068 Score=43.94 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=37.8
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+.||+|++|+.-.+.-+|--.-+...-.....-..+.+ .|+|||+++++.+
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~------------------~L~pGGtlv~~aY 260 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLR------------------LLKPGGSLLIRAY 260 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGG------------------GEEEEEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHh------------------hcCCCceEEEEee
Confidence 79999999997555555555544444455566666777 9999999999875
No 346
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.78 E-value=0.018 Score=48.67 Aligned_cols=43 Identities=26% Similarity=0.173 Sum_probs=32.3
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++...+.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~ 222 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAG----ATTVILSTRQATKRRL 222 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT----CSEEEEECSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC----CCEEEEECCCHHHHHH
Confidence 378899999999865 666677777653 1389999999877543
No 347
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.74 E-value=0.015 Score=49.15 Aligned_cols=42 Identities=21% Similarity=0.262 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |.....+++.+ +.+|+++|.++..++.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~Vi~~~~~~~~~~~ 233 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-----GAHVVAFTTSEAKREA 233 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESSGGGHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHH
Confidence 478899999999875 56666666665 4689999999887544
No 348
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.72 E-value=0.075 Score=45.72 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcccCChHHHHHH-HHhCCCCCCCeEEEEeCCCCCC
Q 038391 37 IKPGSSVLDLGCAPGAWLQVAC-QSLGPLDNGGSVVGIDVKKVKV 80 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~-~~~~~~~~~~~v~gvDis~~~i 80 (186)
++++..++|+||..|.++..++ +..+. .++|+++|.+|...
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~---~~~V~afEP~p~~~ 265 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGK---FERVWMIEPDRINL 265 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSC---CSEEEEECCCHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCC---CCEEEEEcCCHHHH
Confidence 4788999999999999999988 44432 37999999999773
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.66 E-value=0.061 Score=44.01 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=33.4
Q ss_pred cCCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 34 YKLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
...+++|++||-+|+|+ |..+..+++.. +.+|++++ ++..++.
T Consensus 137 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~-----Ga~Vi~~~-~~~~~~~ 180 (315)
T 3goh_A 137 KIPLTKQREVLIVGFGAVNNLLTQMLNNA-----GYVVDLVS-ASLSQAL 180 (315)
T ss_dssp TSCCCSCCEEEEECCSHHHHHHHHHHHHH-----TCEEEEEC-SSCCHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEE-ChhhHHH
Confidence 34478899999999964 66777777776 46999999 8877554
No 350
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.59 E-value=0.037 Score=45.71 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=45.4
Q ss_pred CCCCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~ 111 (186)
..+++|++||-.|+ | .|..+..+++.. +.+|+++|.++..++......--.. .|..+.. ...+.+.. .+
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~ga~~~--~~~~~~~~~~~~~~~~-~~ 215 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-----GAHTIAVASTDEKLKIAKEYGAEYL--INASKEDILRQVLKFT-NG 215 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHTTCSEE--EETTTSCHHHHHHHHT-TT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHcCCcEE--EeCCCchHHHHHHHHh-CC
Confidence 35788999999994 3 355666666664 5799999998876543211111111 2222222 22334443 24
Q ss_pred CCccEEEeC
Q 038391 112 KGFSVILSD 120 (186)
Q Consensus 112 ~~~D~V~~d 120 (186)
..+|+|+..
T Consensus 216 ~g~D~vid~ 224 (334)
T 3qwb_A 216 KGVDASFDS 224 (334)
T ss_dssp SCEEEEEEC
T ss_pred CCceEEEEC
Confidence 679999973
No 351
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.56 E-value=0.018 Score=48.68 Aligned_cols=41 Identities=27% Similarity=0.340 Sum_probs=31.1
Q ss_pred CCCCCEEEEEcccC-ChHHHHHHHHhCCCCCC-CeEEEEeCCCCCCCC
Q 038391 37 IKPGSSVLDLGCAP-GAWLQVACQSLGPLDNG-GSVVGIDVKKVKVPS 82 (186)
Q Consensus 37 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~-~~v~gvDis~~~i~~ 82 (186)
+++|++||-+|+|+ |..+..+++.+ + .+|+++|.+++.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~ 235 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSL-----GAENVIVIAGSPNRLKL 235 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT-----TBSEEEEEESCHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHc-----CCceEEEEcCCHHHHHH
Confidence 67899999999664 55666666665 4 599999998877543
No 352
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.49 E-value=1.5 Score=33.11 Aligned_cols=73 Identities=18% Similarity=0.168 Sum_probs=51.9
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
+||=.| |+|+++..+++.+-.. +.+|++++-++..+... .+++++++|+.+. ...+.... ..+|+|+...
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~-~~~~~~~~---~~~d~vi~~a 71 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY---NNVKAVHFDVDWT-PEEMAKQL---HGMDAIINVS 71 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC---TTEEEEECCTTSC-HHHHHTTT---TTCSEEEECC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc---CCceEEEecccCC-HHHHHHHH---cCCCEEEECC
Confidence 466566 5799999999888652 57999999988765432 5789999998861 22344433 3699999876
Q ss_pred CCC
Q 038391 122 CPS 124 (186)
Q Consensus 122 ~~~ 124 (186)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 543
No 353
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.32 E-value=0.1 Score=43.63 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |..+..+++.+ +.+|+++|.++..++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~-----Ga~Vi~~~~~~~~~~~ 218 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM-----GAETYVISRSSRKRED 218 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH-----TCEEEEEESSSTTHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-----CCEEEEEcCCHHHHHH
Confidence 478899999999864 56666666665 4689999999887554
No 354
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.25 E-value=0.045 Score=45.71 Aligned_cols=68 Identities=18% Similarity=0.136 Sum_probs=41.8
Q ss_pred CeEEE-EeeecCCChhhHhhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCC
Q 038391 88 RVQTV-SADVINLPSNQVRALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDS 166 (186)
Q Consensus 88 ~~~~~-~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (186)
..+++ ++|+... +..+ ++++||+|++|+|.............-.......+.++.+
T Consensus 38 ~~~l~i~gD~l~~----L~~l--~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~r----------------- 94 (319)
T 1eg2_A 38 TRHVYDVCDCLDT----LAKL--PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAER----------------- 94 (319)
T ss_dssp EEEEEEECCHHHH----HHTS--CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHH-----------------
T ss_pred cceEEECCcHHHH----HHhC--ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHH-----------------
Confidence 35666 8887542 2222 4579999999987544310000011123345667777777
Q ss_pred cccccCcEEEEEE
Q 038391 167 GVLKPGGHLVIKL 179 (186)
Q Consensus 167 ~~LkpgG~lvi~~ 179 (186)
+|+|+|.++|.+
T Consensus 95 -vLk~~G~i~i~~ 106 (319)
T 1eg2_A 95 -VLSPTGSIAIFG 106 (319)
T ss_dssp -HEEEEEEEEEEE
T ss_pred -HcCCCeEEEEEc
Confidence 999999999864
No 355
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.21 E-value=0.074 Score=44.43 Aligned_cols=79 Identities=15% Similarity=0.193 Sum_probs=44.1
Q ss_pred cCCCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCC
Q 038391 34 YKLIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPK 110 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~ 110 (186)
...++++++||-.|++ .|.....+++.. +.+|++++.++..++..... .... ..|..+.. ...+.+.. .
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~-ga~~-~~d~~~~~~~~~~~~~~-~ 236 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY-----GLKILGTAGTEEGQKIVLQN-GAHE-VFNHREVNYIDKIKKYV-G 236 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHT-TCSE-EEETTSTTHHHHHHHHH-C
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC-----CCEEEEEeCChhHHHHHHHc-CCCE-EEeCCCchHHHHHHHHc-C
Confidence 3457889999999973 344555555554 57999999987764431111 1111 12333322 12233332 2
Q ss_pred CCCccEEEeC
Q 038391 111 QKGFSVILSD 120 (186)
Q Consensus 111 ~~~~D~V~~d 120 (186)
+..+|+|+..
T Consensus 237 ~~~~D~vi~~ 246 (351)
T 1yb5_A 237 EKGIDIIIEM 246 (351)
T ss_dssp TTCEEEEEES
T ss_pred CCCcEEEEEC
Confidence 4579999873
No 356
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.16 E-value=0.081 Score=42.46 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=42.5
Q ss_pred eEEEEeeecCCChhhHhhhCCCCCCccEEEeCCCCCCC-CCccc--chHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCC
Q 038391 89 VQTVSADVINLPSNQVRALSPKQKGFSVILSDMCPSVS-GITTK--DAALSVELGMRAVDLALGPAALASPVNNSDSSTD 165 (186)
Q Consensus 89 ~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (186)
.+++++|+.. .+..+ ++++||+|++|+|.... ..+.. ....-......++.++.+
T Consensus 5 ~~l~~gD~~~----~l~~l--~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~---------------- 62 (260)
T 1g60_A 5 NKIHQMNCFD----FLDQV--ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLD---------------- 62 (260)
T ss_dssp SSEEECCHHH----HHHHS--CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHH----------------
T ss_pred CeEEechHHH----HHHhc--cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHH----------------
Confidence 4567888754 23333 35799999999986543 11110 122223355677777777
Q ss_pred CcccccCcEEEEEE
Q 038391 166 SGVLKPGGHLVIKL 179 (186)
Q Consensus 166 ~~~LkpgG~lvi~~ 179 (186)
+|+|+|.++|.+
T Consensus 63 --~Lk~~g~i~v~~ 74 (260)
T 1g60_A 63 --KLDKDGSLYIFN 74 (260)
T ss_dssp --HEEEEEEEEEEE
T ss_pred --HhcCCeEEEEEc
Confidence 999999999875
No 357
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.81 E-value=0.21 Score=41.60 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=56.9
Q ss_pred CCCC------CEEEEEcccCChHHHHH-HHHh-CCCCCCCe-EEEEeCCCC---CCCCcCCCCCeEEEEeeecCCChhhH
Q 038391 37 IKPG------SSVLDLGCAPGAWLQVA-CQSL-GPLDNGGS-VVGIDVKKV---KVPSLHCDARVQTVSADVINLPSNQV 104 (186)
Q Consensus 37 ~~~~------~~vLDlGcG~G~~~~~l-~~~~-~~~~~~~~-v~gvDis~~---~i~~~~~~~~~~~~~~d~~~~~~~~l 104 (186)
+++| ++||-+|+ |..+..+ ++.. ... +.+ |+++|.++. .++.... .....+ |..+.....+
T Consensus 164 ~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~~v--~~~~~~~~~i 236 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE-LDATYV--DSRQTPVEDV 236 (357)
T ss_dssp HTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH-TTCEEE--ETTTSCGGGH
T ss_pred CCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH-cCCccc--CCCccCHHHH
Confidence 5678 99999998 4444444 4433 321 455 999999987 5443211 112323 4333221114
Q ss_pred hhhCCCCCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEcc
Q 038391 105 RALSPKQKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLE 181 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 181 (186)
.++ .+ .+|+|+-. .+. ...+..+.+ .|+++|++++--..
T Consensus 237 ~~~--~g-g~Dvvid~-----~g~------------~~~~~~~~~------------------~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 237 PDV--YE-QMDFIYEA-----TGF------------PKHAIQSVQ------------------ALAPNGVGALLGVP 275 (357)
T ss_dssp HHH--SC-CEEEEEEC-----SCC------------HHHHHHHHH------------------HEEEEEEEEECCCC
T ss_pred HHh--CC-CCCEEEEC-----CCC------------hHHHHHHHH------------------HHhcCCEEEEEeCC
Confidence 444 23 89999862 221 123445555 89999999875443
No 358
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.78 E-value=0.12 Score=53.87 Aligned_cols=104 Identities=14% Similarity=0.121 Sum_probs=48.4
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCC--CCeEEEEeCCCCCCCCcCCCC-CeEEEE--eeecCCChhhHhhhCCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDN--GGSVVGIDVKKVKVPSLHCDA-RVQTVS--ADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~--~~~v~gvDis~~~i~~~~~~~-~~~~~~--~d~~~~~~~~l~~~~~~~~~ 113 (186)
+..+||++|+|+|..+..+.+.+... + -.+.+..|+|+...+.++... .+...+ .|..+.. .+ ...+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~-~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~-----~~--~~~~ 1311 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQ-PVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPA-----PG--SLGK 1311 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTS-SSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCC-----C-------
T ss_pred CCceEEEECCCccHHHHHHHHhhccc-CcccceEEEecCChHHHHHHHHHhhhcccccccccccccc-----cC--CCCc
Confidence 45699999999999888887776420 1 136778899988875543321 111111 1211110 00 1347
Q ss_pred ccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEE
Q 038391 114 FSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKL 179 (186)
Q Consensus 114 ~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 179 (186)
||+|++.- ..|... .....+.++.+ +|||||.|++..
T Consensus 1312 ydlvia~~-----vl~~t~------~~~~~l~~~~~------------------lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1312 ADLLVCNC-----ALATLG------DPAVAVGNMAA------------------TLKEGGFLLLHT 1348 (2512)
T ss_dssp CCEEEEEC-----C--------------------------------------------CCEEEEEE
T ss_pred eeEEEEcc-----cccccc------cHHHHHHHHHH------------------hcCCCcEEEEEe
Confidence 99999832 222211 13356666776 999999998864
No 359
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.70 E-value=0.11 Score=43.13 Aligned_cols=72 Identities=11% Similarity=0.096 Sum_probs=41.0
Q ss_pred CCCEEEEE-cccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 39 PGSSVLDL-GCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 39 ~~~~vLDl-GcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+|++||-. |+|+ |..+..+++.. +.+|++++.++..++......--.++ |..+.....+.+. .++.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~~--~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-----GLRVITTASRNETIEWTKKMGADIVL--NHKESLLNQFKTQ--GIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-----TCEEEEECCSHHHHHHHHHHTCSEEE--CTTSCHHHHHHHH--TCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhcCCcEEE--ECCccHHHHHHHh--CCCCccE
Confidence 89999999 4554 56666666664 57999999987664431110000111 2111112234444 3568999
Q ss_pred EEe
Q 038391 117 ILS 119 (186)
Q Consensus 117 V~~ 119 (186)
|+.
T Consensus 221 v~d 223 (346)
T 3fbg_A 221 VFC 223 (346)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 360
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.62 E-value=0.06 Score=45.83 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=45.5
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQKG 113 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~~ 113 (186)
.+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++..++......--.++ |..+.. ...+.++. .+..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G----a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~i~~~t-~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG----ASKVILSEPSEVRRNLAKELGADHVI--DPTKENFVEAVLDYT-NGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT----CSEEEEECSCHHHHHHHHHHTCSEEE--CTTTSCHHHHHHHHT-TTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHcCCCEEE--cCCCCCHHHHHHHHh-CCCC
Confidence 478899999999865 566666666653 13899999998775432111101111 222222 22344444 3558
Q ss_pred ccEEEe
Q 038391 114 FSVILS 119 (186)
Q Consensus 114 ~D~V~~ 119 (186)
+|+|+-
T Consensus 283 ~D~vid 288 (404)
T 3ip1_A 283 AKLFLE 288 (404)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999986
No 361
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.28 E-value=0.066 Score=44.38 Aligned_cols=42 Identities=26% Similarity=0.286 Sum_probs=31.4
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++|++||-+|+|+ |.....+++.. +.+|+++|.++..++.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~ 203 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-----GLNVVAVDIGDEKLEL 203 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-----TCEEEEECSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHH
Confidence 378899999999964 55556666654 5699999998876543
No 362
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.04 E-value=0.17 Score=41.99 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=31.0
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKV 80 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i 80 (186)
++|..|||..||+|..+....+. +-+.+|+|+++..+
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~------gr~~ig~e~~~~~~ 287 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE------SRKWISFEMKPEYV 287 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT------TCEEEEEESCHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc------CCCEEEEeCCHHHH
Confidence 78999999999999876665554 57999999999774
No 363
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.99 E-value=0.25 Score=41.07 Aligned_cols=45 Identities=27% Similarity=0.337 Sum_probs=34.1
Q ss_pred hHHHHHHHcCCCCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCC
Q 038391 26 KLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKK 77 (186)
Q Consensus 26 ~l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~ 77 (186)
.|++.+.... .++|..|||..||+|..+....+. +-+.+|+|+.+
T Consensus 230 ~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~------~r~~ig~e~~~ 274 (319)
T 1eg2_A 230 AVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE------GRNSICTDAAP 274 (319)
T ss_dssp HHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH------TCEEEEEESST
T ss_pred HHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc------CCcEEEEECCc
Confidence 4444333322 378999999999999877777766 57999999999
No 364
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.22 E-value=0.22 Score=45.36 Aligned_cols=40 Identities=5% Similarity=0.033 Sum_probs=28.5
Q ss_pred CCEEEEEcccCChHHHHHHHHhC--------CCCCCCeEEEEeCCCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLG--------PLDNGGSVVGIDVKKVK 79 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~--------~~~~~~~v~gvDis~~~ 79 (186)
.-+|+|+|.|+|.....+.+.+. ..+...+++.+|..|..
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~ 106 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLH 106 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCC
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCC
Confidence 45899999999998888777541 10012579999997744
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.12 E-value=0.13 Score=42.72 Aligned_cols=104 Identities=15% Similarity=0.286 Sum_probs=59.3
Q ss_pred CCCCCCCEEEEEcccC--ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGCAP--GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~--G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~ 111 (186)
..++++++||-.|+|. |..+..+++... +.+|+++|.++..++..... .... ..|..+... ..+..+.. .
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~----Ga~Vi~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~-~ 238 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS----GATIIGVDVREEAVEAAKRA-GADY-VINASMQDPLAEIRRITE-S 238 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT----CCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTT-T
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC----CCeEEEEcCCHHHHHHHHHh-CCCE-EecCCCccHHHHHHHHhc-C
Confidence 3478899999999873 444555555541 36899999988764432110 0111 123333221 12333331 1
Q ss_pred CCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 112 KGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 112 ~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
+.+|+|+... +. ...+..+.+ .|+++|++++--.
T Consensus 239 ~~~d~vi~~~-----g~------------~~~~~~~~~------------------~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 239 KGVDAVIDLN-----NS------------EKTLSVYPK------------------ALAKQGKYVMVGL 272 (347)
T ss_dssp SCEEEEEESC-----CC------------HHHHTTGGG------------------GEEEEEEEEECCS
T ss_pred CCceEEEECC-----CC------------HHHHHHHHH------------------HHhcCCEEEEECC
Confidence 4899999743 21 124455555 8999999987543
No 366
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.11 E-value=0.078 Score=43.96 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=46.0
Q ss_pred CCCCCCEEEEEcc--cCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGC--APGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~~ 112 (186)
.++++++||-.|+ |.|.....+++.. +.+|+++|.++..++..... .... ..|..+... ..+.+.. .+.
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-----G~~Vi~~~~~~~~~~~~~~~-ga~~-~~d~~~~~~~~~~~~~~-~~~ 234 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-----GARVIATAGSEDKLRRAKAL-GADE-TVNYTHPDWPKEVRRLT-GGK 234 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHH-TCSE-EEETTSTTHHHHHHHHT-TTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHhc-CCCE-EEcCCcccHHHHHHHHh-CCC
Confidence 4688999999998 3466666666664 57999999987765432110 1111 124333221 2333333 245
Q ss_pred CccEEEeC
Q 038391 113 GFSVILSD 120 (186)
Q Consensus 113 ~~D~V~~d 120 (186)
.+|+|+..
T Consensus 235 ~~d~vi~~ 242 (343)
T 2eih_A 235 GADKVVDH 242 (343)
T ss_dssp CEEEEEES
T ss_pred CceEEEEC
Confidence 79999974
No 367
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.09 E-value=0.044 Score=45.50 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=31.3
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+ +|++||-+|+|+ |..+..+++...+ +.+|+++|.++..++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~---Ga~Vi~~~~~~~~~~~ 211 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMK---NITIVGISRSKKHRDF 211 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCT---TCEEEEECSCHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcC---CCEEEEEeCCHHHHHH
Confidence 35 899999999964 5666667766511 3689999998876543
No 368
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.99 E-value=0.14 Score=41.53 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 37 IKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 37 ~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
+++|++||-.|+ | .|..+..+++.. +.+|+++|.++..++.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~ 165 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-----GLRVLAAASRPEKLAL 165 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-----TCEEEEEESSGGGSHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHH
Confidence 789999999997 3 366666666665 4699999998877544
No 369
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.92 E-value=0.052 Score=45.11 Aligned_cols=75 Identities=20% Similarity=0.238 Sum_probs=42.5
Q ss_pred CCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~ 112 (186)
.+ +|++||-+|+|. |.....+++.. +. +|+++|.++..++..... ....+ .|..+.. ...+.++. .+.
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~-----Ga~~Vi~~~~~~~~~~~~~~~-Ga~~~-~~~~~~~~~~~v~~~~-~g~ 235 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKAS-----GAYPVIVSEPSDFRRELAKKV-GADYV-INPFEEDVVKEVMDIT-DGN 235 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHT-----TCCSEEEECSCHHHHHHHHHH-TCSEE-ECTTTSCHHHHHHHHT-TTS
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHHHHHh-CCCEE-ECCCCcCHHHHHHHHc-CCC
Confidence 35 899999999953 55555666654 45 899999988764432110 01111 1222222 12333443 245
Q ss_pred CccEEEe
Q 038391 113 GFSVILS 119 (186)
Q Consensus 113 ~~D~V~~ 119 (186)
.+|+|+.
T Consensus 236 g~D~vid 242 (348)
T 2d8a_A 236 GVDVFLE 242 (348)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 7999987
No 370
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.91 E-value=0.069 Score=44.65 Aligned_cols=40 Identities=25% Similarity=0.212 Sum_probs=30.2
Q ss_pred CC-CCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC
Q 038391 37 IK-PGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVP 81 (186)
Q Consensus 37 ~~-~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~ 81 (186)
++ +|++||-+|+|+ |..+..+++.+ +.+|+++|.++..++
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~-----Ga~Vi~~~~~~~~~~ 218 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM-----GHHVTVISSSNKKRE 218 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH-----TCEEEEEESSTTHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-----CCeEEEEeCChHHHH
Confidence 56 899999999764 55556666665 469999999987754
No 371
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.83 E-value=0.075 Score=46.97 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=50.0
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCC---cC-CCCCeEEEEeeecCCChh------------h
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPS---LH-CDARVQTVSADVINLPSN------------Q 103 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~---~~-~~~~~~~~~~d~~~~~~~------------~ 103 (186)
-+++||.||.|+++.-+.+. |. .|+++|+++....- +. ..+...++.+|+.++... .
T Consensus 89 ~~viDLFaG~GGlslG~~~a------G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI------GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT------TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHC------CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhh
Confidence 47999999999999988875 34 58999999977543 11 123455677887654311 0
Q ss_pred HhhhCCCCCCccEEEeCCCCCC
Q 038391 104 VRALSPKQKGFSVILSDMCPSV 125 (186)
Q Consensus 104 l~~~~~~~~~~D~V~~d~~~~~ 125 (186)
+... ...+|+++...+|..
T Consensus 163 i~~~---~~~~Dvl~gGpPCQ~ 181 (482)
T 3me5_A 163 IRQH---IPEHDVLLAGFPCQP 181 (482)
T ss_dssp HHHH---SCCCSEEEEECCCCC
T ss_pred hhhc---CCCCCEEEecCCCcc
Confidence 1111 236899998877643
No 372
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.73 E-value=0.078 Score=43.32 Aligned_cols=81 Identities=14% Similarity=0.140 Sum_probs=51.4
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCCh-h-hHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPS-N-QVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~~~~ 114 (186)
+|+.+|--|++.| ++..+++.+-. .|.+|+.+|.+++.++. .....+..+++.|+++... . .+......-++.
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~--~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVA--EGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4667777776554 77777766654 27899999998876543 1223467788899887541 1 111111112579
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.|..
T Consensus 105 DiLVNNAG 112 (273)
T 4fgs_A 105 DVLFVNAG 112 (273)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 99999864
No 373
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.63 E-value=0.37 Score=38.02 Aligned_cols=82 Identities=13% Similarity=0.048 Sum_probs=49.1
Q ss_pred CCCEEEEEcccCC-hHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCCCh--hhHhhhCC
Q 038391 39 PGSSVLDLGCAPG-AWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINLPS--NQVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G-~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~~~--~~l~~~~~ 109 (186)
.++++|-.|++.+ +++..+++.+-. .+.+|+.++.++...+. .....++.+++.|+++... ..+.....
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE--AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 4678888888732 466666665533 16799999887543211 1122368899999987641 11111111
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
..+.+|+++.+..
T Consensus 84 ~~g~id~li~~Ag 96 (266)
T 3oig_A 84 QVGVIHGIAHCIA 96 (266)
T ss_dssp HHSCCCEEEECCC
T ss_pred HhCCeeEEEEccc
Confidence 1247899998764
No 374
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.56 E-value=0.13 Score=44.45 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCCCCEEEEEcc-cC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC
Q 038391 36 LIKPGSSVLDLGC-AP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVP 81 (186)
Q Consensus 36 ~~~~~~~vLDlGc-G~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~ 81 (186)
.+++|++||-+|+ |+ |..+..+++.. +.+|++++.++..++
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-----Ga~vi~~~~~~~~~~ 267 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-----GANPICVVSSPQKAE 267 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCeEEEEECCHHHHH
Confidence 4688999999998 43 66777777765 579999998776644
No 375
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.54 E-value=0.2 Score=46.30 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=29.5
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCC-CeEEEEeCCCCCCCC
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNG-GSVVGIDVKKVKVPS 82 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~-~~v~gvDis~~~i~~ 82 (186)
-+|+||.||.|+++.-|.+.....+.. -.++++|+++.+++-
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~T 255 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQS 255 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHH
Confidence 479999999999999888762100000 258899999987543
No 376
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=90.32 E-value=0.29 Score=44.13 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=36.2
Q ss_pred CCCccEEEeCCCCCCCCCcccchHHHHHHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEc
Q 038391 111 QKGFSVILSDMCPSVSGITTKDAALSVELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLL 180 (186)
Q Consensus 111 ~~~~D~V~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 180 (186)
..+||+|++|+.-.+..+|--.-+...-.....-..+++ +|+|||+++++.+
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~------------------~l~pGGt~v~~~Y 270 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALN------------------CLNPGGTLVVKSY 270 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH------------------TEEEEEEEEEEES
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHh------------------hcCCCceEEEEEe
Confidence 469999999986555555544444433344455555666 9999999999876
No 377
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=89.99 E-value=0.15 Score=40.61 Aligned_cols=82 Identities=11% Similarity=0.125 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-cCChHHHHHHHHhCCCCCCCeEEEEeCCCCCC-CC--cCCCCCeEEEEeeecCCCh-h-hHhhhCC---
Q 038391 39 PGSSVLDLGC-APGAWLQVACQSLGPLDNGGSVVGIDVKKVKV-PS--LHCDARVQTVSADVINLPS-N-QVRALSP--- 109 (186)
Q Consensus 39 ~~~~vLDlGc-G~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i-~~--~~~~~~~~~~~~d~~~~~~-~-~l~~~~~--- 109 (186)
+++++|-.|+ |+|+++..+++.+-. .+.+|+.++.++... .. .....++.+++.|+++... . .+.....
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE--QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH--TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH--CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3678888898 488889888887653 267999999876431 11 1122357788889876431 1 1111110
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
..+.+|+++.+..
T Consensus 84 ~~~~iD~lv~nAg 96 (269)
T 2h7i_A 84 AGNKLDGVVHSIG 96 (269)
T ss_dssp TTCCEEEEEECCC
T ss_pred CCCCceEEEECCc
Confidence 0127999999864
No 378
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.93 E-value=0.074 Score=44.36 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=44.3
Q ss_pred CCCCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~ 111 (186)
..+++|++||-.|+ | .|..+..+++.. +.+|+++|.++..++......-... .|..+... ..+.+.. +
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~~~~~~~~~~--~ 233 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAF-----GAEVYATAGSTGKCEACERLGAKRG--INYRSEDFAAVIKAET--G 233 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHH--S
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhcCCCEE--EeCCchHHHHHHHHHh--C
Confidence 44788999998853 3 355666666664 5799999998876543211110111 23322221 2333333 4
Q ss_pred CCccEEEeC
Q 038391 112 KGFSVILSD 120 (186)
Q Consensus 112 ~~~D~V~~d 120 (186)
+.+|+|+..
T Consensus 234 ~g~Dvvid~ 242 (353)
T 4dup_A 234 QGVDIILDM 242 (353)
T ss_dssp SCEEEEEES
T ss_pred CCceEEEEC
Confidence 689999973
No 379
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.76 E-value=0.27 Score=40.83 Aligned_cols=78 Identities=23% Similarity=0.250 Sum_probs=43.2
Q ss_pred CCCCCC--CEEEEEccc--CChHHHHHHHHhCCCCCCC-eEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhC
Q 038391 35 KLIKPG--SSVLDLGCA--PGAWLQVACQSLGPLDNGG-SVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALS 108 (186)
Q Consensus 35 ~~~~~~--~~vLDlGcG--~G~~~~~l~~~~~~~~~~~-~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~ 108 (186)
..++++ ++||-.|++ .|.....++... +. +|+++|.++..++.......... ..|..+... ..+.+..
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-----Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFL-----GCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESC 227 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-----TCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHC
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHC-----CCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhc
Confidence 447889 999999983 244445555544 46 99999998765433111001111 124433221 2333443
Q ss_pred CCCCCccEEEeC
Q 038391 109 PKQKGFSVILSD 120 (186)
Q Consensus 109 ~~~~~~D~V~~d 120 (186)
. + .+|+++..
T Consensus 228 ~-~-~~d~vi~~ 237 (357)
T 2zb4_A 228 P-A-GVDVYFDN 237 (357)
T ss_dssp T-T-CEEEEEES
T ss_pred C-C-CCCEEEEC
Confidence 2 3 79999974
No 380
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.56 E-value=0.18 Score=43.33 Aligned_cols=43 Identities=23% Similarity=0.267 Sum_probs=31.1
Q ss_pred CCCCCCCEEEEEcc-cC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 35 KLIKPGSSVLDLGC-AP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 35 ~~~~~~~~vLDlGc-G~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
..+++|++||-.|+ |. |..+..+++.. +.+|++++.++..++.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-----Ga~vi~~~~~~~~~~~ 260 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-----GGIPVAVVSSAQKEAA 260 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHH
Confidence 34788999999997 32 56666666664 5799999987766443
No 381
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=89.53 E-value=0.23 Score=47.69 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=50.0
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCC--eEEEEeCCCCCCCC-cCCCCCeEEEEeeecCCChh----hH-----hhhC
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGG--SVVGIDVKKVKVPS-LHCDARVQTVSADVINLPSN----QV-----RALS 108 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~--~v~gvDis~~~i~~-~~~~~~~~~~~~d~~~~~~~----~l-----~~~~ 108 (186)
-+++||.||.|+++.-+.+. |. .|+++|+++....- ........++.+|+..+... .+ ..++
T Consensus 541 l~~iDLFaG~GGlslGl~~A------G~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQA------GISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHH------TSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CeEEEeccCccHHHHHHHHC------CCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcc
Confidence 37999999999999999886 43 58899999988543 22233455666665432100 00 0011
Q ss_pred CCCCCccEEEeCCCCCC
Q 038391 109 PKQKGFSVILSDMCPSV 125 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~ 125 (186)
..+.+|+|+...+|..
T Consensus 615 -~~~~vDll~GGpPCQ~ 630 (1002)
T 3swr_A 615 -QKGDVEMLCGGPPCQG 630 (1002)
T ss_dssp -CTTTCSEEEECCCCTT
T ss_pred -cCCCeeEEEEcCCCcc
Confidence 1357999999877643
No 382
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.50 E-value=0.35 Score=40.51 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=27.5
Q ss_pred CCCCCEEEEEcc-cC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCC
Q 038391 37 IKPGSSVLDLGC-AP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKV 80 (186)
Q Consensus 37 ~~~~~~vLDlGc-G~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i 80 (186)
+++|++||-.|+ |+ |.....+++.. +.+|++++ ++...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-----Ga~Vi~~~-~~~~~ 220 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-----DAHVTAVC-SQDAS 220 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-----TCEEEEEE-CGGGH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-----CCEEEEEe-ChHHH
Confidence 678999999994 43 56666666665 46999998 65543
No 383
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.18 E-value=0.16 Score=41.59 Aligned_cols=79 Identities=16% Similarity=0.111 Sum_probs=43.8
Q ss_pred cCCCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCC
Q 038391 34 YKLIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPK 110 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~ 110 (186)
...++++++||-.|++ .|.....++... +.+|+++|.++..++..... .... ..|..+... ..+.+...
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----G~~V~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~- 206 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL-----GAKLIGTVGTAQKAQSALKA-GAWQ-VINYREEDLVERLKEITG- 206 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTT-
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCccHHHHHHHHhC-
Confidence 3347889999999842 345555555554 57999999987654331110 1111 123333221 23333332
Q ss_pred CCCccEEEeC
Q 038391 111 QKGFSVILSD 120 (186)
Q Consensus 111 ~~~~D~V~~d 120 (186)
+..+|+++..
T Consensus 207 ~~~~D~vi~~ 216 (327)
T 1qor_A 207 GKKVRVVYDS 216 (327)
T ss_dssp TCCEEEEEEC
T ss_pred CCCceEEEEC
Confidence 3479999974
No 384
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.74 E-value=0.15 Score=42.36 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=43.1
Q ss_pred CCCCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~ 111 (186)
..+++|++||-+|+ | .|..+..+++.. +.+|+++ .++..++..... .... .| .... ...+.... .+
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-----Ga~Vi~~-~~~~~~~~~~~l-Ga~~--i~-~~~~~~~~~~~~~-~~ 214 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALAR-----GARVFAT-ARGSDLEYVRDL-GATP--ID-ASREPEDYAAEHT-AG 214 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHT-----TCEEEEE-ECHHHHHHHHHH-TSEE--EE-TTSCHHHHHHHHH-TT
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHC-----CCEEEEE-eCHHHHHHHHHc-CCCE--ec-cCCCHHHHHHHHh-cC
Confidence 34688999999994 4 366667777765 5799999 776654332111 1122 22 2222 12333333 24
Q ss_pred CCccEEEe
Q 038391 112 KGFSVILS 119 (186)
Q Consensus 112 ~~~D~V~~ 119 (186)
..+|+|+.
T Consensus 215 ~g~D~vid 222 (343)
T 3gaz_A 215 QGFDLVYD 222 (343)
T ss_dssp SCEEEEEE
T ss_pred CCceEEEE
Confidence 68999987
No 385
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.63 E-value=3.4 Score=29.72 Aligned_cols=75 Identities=16% Similarity=0.252 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 37 IKPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 37 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
..++.+|+-+|| |.++..+++.+.. .+.+|+++|.++..+..........++.+|..+. ..+... .-..+|+
T Consensus 16 ~~~~~~v~IiG~--G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~--~~l~~~--~~~~ad~ 87 (155)
T 2g1u_A 16 KQKSKYIVIFGC--GRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEF--ETLKEC--GMEKADM 87 (155)
T ss_dssp -CCCCEEEEECC--SHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSH--HHHHTT--TGGGCSE
T ss_pred ccCCCcEEEECC--CHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCH--HHHHHc--CcccCCE
Confidence 456789999986 6666666665532 1568999999988765433122345566665432 222221 1246899
Q ss_pred EEe
Q 038391 117 ILS 119 (186)
Q Consensus 117 V~~ 119 (186)
|+.
T Consensus 88 Vi~ 90 (155)
T 2g1u_A 88 VFA 90 (155)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 386
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=88.61 E-value=0.19 Score=42.05 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=24.5
Q ss_pred CCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCC
Q 038391 40 GSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKK 77 (186)
Q Consensus 40 ~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~ 77 (186)
|++||-+|+|. |.....+++.. +.+|+++|.++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----GLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----TCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCEEEEEeCCc
Confidence 99999999843 44445555554 46999999988
No 387
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.57 E-value=0.19 Score=41.26 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=43.8
Q ss_pred CCCCCCCEEEEEcc--cCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGC--APGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~ 111 (186)
..++++++||-.|+ |.|.....++... +.+|+++|.++..++..... .... ..|..+... ..+.+... +
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----G~~Vi~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~i~~~~~-~ 212 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL-----GATVIGTVSTEEKAETARKL-GCHH-TINYSTQDFAEVVREITG-G 212 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHHT-T
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCHHHHHHHHHHhC-C
Confidence 34788999999996 3355555555554 57999999988654331110 1111 124333221 22333322 3
Q ss_pred CCccEEEeC
Q 038391 112 KGFSVILSD 120 (186)
Q Consensus 112 ~~~D~V~~d 120 (186)
..+|+++..
T Consensus 213 ~~~d~vi~~ 221 (333)
T 1wly_A 213 KGVDVVYDS 221 (333)
T ss_dssp CCEEEEEEC
T ss_pred CCCeEEEEC
Confidence 579999974
No 388
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.24 E-value=0.19 Score=39.61 Aligned_cols=83 Identities=10% Similarity=-0.012 Sum_probs=51.3
Q ss_pred CCCCEEEEEccc-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCCh--hhHhhhCCC
Q 038391 38 KPGSSVLDLGCA-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPS--NQVRALSPK 110 (186)
Q Consensus 38 ~~~~~vLDlGcG-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~ 110 (186)
.++++||-.|++ +|+++..+++.+-. .+.+|+.++.+...... .....++.+++.|+++... ..+......
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR--EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH--cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 457889988885 47788888777643 16799999987533211 1122347788899887531 111111111
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
.+.+|+++.+..
T Consensus 90 ~g~id~lv~nAg 101 (271)
T 3ek2_A 90 WDSLDGLVHSIG 101 (271)
T ss_dssp CSCEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 257999999764
No 389
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.02 E-value=0.38 Score=40.19 Aligned_cols=76 Identities=14% Similarity=0.143 Sum_probs=44.3
Q ss_pred CCCCCCCEEEEEc-cc-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLG-CA-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~ 111 (186)
..+++|++||-.| +| .|.....+++.. +.+|++++.++..++..... ....+ .|..+... ..+.... +
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-----Ga~Vi~~~~~~~~~~~~~~~-Ga~~~-~~~~~~~~~~~~~~~~--~ 229 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA-----KCHVIGTCSSDEKSAFLKSL-GCDRP-INYKTEPVGTVLKQEY--P 229 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHT-TCSEE-EETTTSCHHHHHHHHC--T
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHc-CCcEE-EecCChhHHHHHHHhc--C
Confidence 3478899999999 34 366777777765 46999999987664332111 11111 12222221 2233332 3
Q ss_pred CCccEEEe
Q 038391 112 KGFSVILS 119 (186)
Q Consensus 112 ~~~D~V~~ 119 (186)
..+|+|+.
T Consensus 230 ~g~D~vid 237 (362)
T 2c0c_A 230 EGVDVVYE 237 (362)
T ss_dssp TCEEEEEE
T ss_pred CCCCEEEE
Confidence 57999987
No 390
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.96 E-value=0.18 Score=41.34 Aligned_cols=42 Identities=19% Similarity=0.112 Sum_probs=30.9
Q ss_pred CCCCCC-EEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGS-SVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~-~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++++ +||-+|+ | .|..+..+++.. +.+|++++.++..++.
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-----Ga~vi~~~~~~~~~~~ 189 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR-----GYTVEASTGKAAEHDY 189 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT-----TCCEEEEESCTTCHHH
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC-----CCEEEEEECCHHHHHH
Confidence 367775 8999997 3 366667777765 4689999999877543
No 391
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=87.94 E-value=0.16 Score=41.53 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=27.5
Q ss_pred EEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 42 SVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 42 ~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
+||-.|+ | .|..+..+++.. +.+|++++.+++.++.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-----Ga~Vi~~~~~~~~~~~ 186 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-----GYQVAAVSGRESTHGY 186 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-----TCCEEEEESCGGGHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHH
Confidence 4999987 3 377777777775 5699999999887544
No 392
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.44 E-value=0.26 Score=39.91 Aligned_cols=81 Identities=15% Similarity=0.131 Sum_probs=48.9
Q ss_pred CCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCCh--hhHhhhCCCCC
Q 038391 40 GSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPS--NQVRALSPKQK 112 (186)
Q Consensus 40 ~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~ 112 (186)
++++|-.|++. .+++..+++.+-. .+.+|+.+|.++...+. .....++.+++.|+++... ..+......-+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCA--QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHH--CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67888888764 4677777766543 16799999988643221 1111346788899887531 11111111114
Q ss_pred CccEEEeCCC
Q 038391 113 GFSVILSDMC 122 (186)
Q Consensus 113 ~~D~V~~d~~ 122 (186)
.+|+++.+..
T Consensus 108 ~iD~lVnnAG 117 (296)
T 3k31_A 108 SLDFVVHAVA 117 (296)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999764
No 393
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.33 E-value=2 Score=32.15 Aligned_cols=69 Identities=17% Similarity=0.198 Sum_probs=47.5
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
+||-.| |+|+++..+++.+-.. +.+|++++-++..+.... .+++++.+|+.+.... .+ ..+|+|+...
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~---~~----~~~d~vi~~a 69 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLS---DL----SDQNVVVDAY 69 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHH---HH----TTCSEEEECC
T ss_pred eEEEEc-CCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhh---hh----cCCCEEEECC
Confidence 455555 4688888888776431 579999998876543211 5688999999887542 22 4689999866
Q ss_pred C
Q 038391 122 C 122 (186)
Q Consensus 122 ~ 122 (186)
.
T Consensus 70 g 70 (221)
T 3ew7_A 70 G 70 (221)
T ss_dssp C
T ss_pred c
Confidence 4
No 394
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=86.73 E-value=0.54 Score=37.10 Aligned_cols=81 Identities=12% Similarity=0.180 Sum_probs=50.0
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCCh-h-hHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPS-N-QVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~~~~ 114 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.+|.++..+... ....++.+++.|+++... . .+......-+.+
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVE--GGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46678877755 5677777776643 167999999887654331 123468888999887531 1 111111112479
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.+..
T Consensus 84 d~lv~nAg 91 (255)
T 4eso_A 84 DLLHINAG 91 (255)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 99998764
No 395
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=86.56 E-value=0.85 Score=37.88 Aligned_cols=78 Identities=23% Similarity=0.294 Sum_probs=44.6
Q ss_pred CCCCCCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 35 KLIKPGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
..+++|++||-+|+|+ |.....+++.++ +.+|+++|.++..++......--.++ |..+.....+.++.. +..
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~----Ga~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~v~~~~~-g~g 254 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT----PATVIALDVKEEKLKLAERLGADHVV--DARRDPVKQVMELTR-GRG 254 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC----CCEEEEEESSHHHHHHHHHTTCSEEE--ETTSCHHHHHHHHTT-TCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC----CCeEEEEeCCHHHHHHHHHhCCCEEE--eccchHHHHHHHHhC-CCC
Confidence 4478999999999863 445555666651 36899999988765432111111111 222221123344432 447
Q ss_pred ccEEEe
Q 038391 114 FSVILS 119 (186)
Q Consensus 114 ~D~V~~ 119 (186)
+|+|+-
T Consensus 255 ~Dvvid 260 (359)
T 1h2b_A 255 VNVAMD 260 (359)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 999987
No 396
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=86.43 E-value=0.56 Score=46.30 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=48.3
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCC--eEEEEeCCCCCCCC-cCCCCCeEEEEeeecCCChhhH---------hhhC
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGG--SVVGIDVKKVKVPS-LHCDARVQTVSADVINLPSNQV---------RALS 108 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~--~v~gvDis~~~i~~-~~~~~~~~~~~~d~~~~~~~~l---------~~~~ 108 (186)
-+++||.||.|+++.-+.+. |. .|+++|+.+.++.- ........++.+|+..+....+ ..+.
T Consensus 852 l~viDLFsG~GGlslGfe~A------G~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp 925 (1330)
T 3av4_A 852 LRTLDVFSGCGGLSEGFHQA------GISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLP 925 (1330)
T ss_dssp EEEEEETCTTSHHHHHHHHT------TSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCC
T ss_pred ceEEecccCccHHHHHHHHC------CCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhcc
Confidence 47999999999999998875 43 58899999987543 1122334455555542210000 0010
Q ss_pred CCCCCccEEEeCCCCCC
Q 038391 109 PKQKGFSVILSDMCPSV 125 (186)
Q Consensus 109 ~~~~~~D~V~~d~~~~~ 125 (186)
..+.+|+|+...+|..
T Consensus 926 -~~~~vDvl~GGpPCQ~ 941 (1330)
T 3av4_A 926 -QKGDVEMLCGGPPCQG 941 (1330)
T ss_dssp -CTTTCSEEEECCCCTT
T ss_pred -ccCccceEEecCCCcc
Confidence 1347899999877643
No 397
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.36 E-value=0.26 Score=40.33 Aligned_cols=42 Identities=21% Similarity=0.150 Sum_probs=30.9
Q ss_pred CCCCCC-EEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 36 LIKPGS-SVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 36 ~~~~~~-~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
.+++++ +||-+|+ | .|..+..+++.. +.+|++++.++..++.
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-----Ga~vi~~~~~~~~~~~ 190 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKR-----GYDVVASTGNREAADY 190 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHH-----TCCEEEEESSSSTHHH
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHH
Confidence 367775 8999998 3 366667777766 4689999999877543
No 398
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.31 E-value=1.4 Score=35.47 Aligned_cols=81 Identities=9% Similarity=0.135 Sum_probs=49.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCCCh--hhHhhhCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINLPS--NQVRALSPK 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~~~--~~l~~~~~~ 110 (186)
+++++|--|++ |+++..+++.+-. .+.+|+.++.++..... .....++.+++.|+++... ..+......
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAK--EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH--CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35677777754 5677777776643 16799999988653111 1233578888999887531 111111111
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
-+.+|+++.+..
T Consensus 123 ~g~iD~lvnnAg 134 (291)
T 3ijr_A 123 LGSLNILVNNVA 134 (291)
T ss_dssp HSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247999998764
No 399
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.28 E-value=0.17 Score=42.45 Aligned_cols=40 Identities=20% Similarity=0.259 Sum_probs=28.7
Q ss_pred CC-CCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC
Q 038391 37 IK-PGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVP 81 (186)
Q Consensus 37 ~~-~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~ 81 (186)
++ +|++||-+|+|. |.....+++.+ +.+|++++.++..++
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~-----Ga~Vi~~~~~~~~~~ 225 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAF-----GSKVTVISTSPSKKE 225 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCGGGHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHH
Confidence 56 899999999753 44445555554 569999999887654
No 400
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=86.22 E-value=0.32 Score=44.08 Aligned_cols=39 Identities=10% Similarity=0.004 Sum_probs=26.9
Q ss_pred CCEEEEEcccCChHHHHHHHHhC--------CCCCCCeEEEEeCCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLG--------PLDNGGSVVGIDVKKV 78 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~--------~~~~~~~v~gvDis~~ 78 (186)
.-+|||+|-|+|.......+.+. ..+...+++++|..|-
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 113 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPL 113 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCC
Confidence 34899999999988877776541 1001247999998553
No 401
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=86.12 E-value=6.8 Score=31.87 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=50.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCC-------C---CC--cCCCCCeEEEEeeecCCChhhHhh
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVK-------V---PS--LHCDARVQTVSADVINLPSNQVRA 106 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~-------i---~~--~~~~~~~~~~~~d~~~~~~~~l~~ 106 (186)
.+.+||-.| |+|+++..+++.+-..+.+.+|+++|.++.. . .. .....++.++.+|+.+.. .+..
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~ 85 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPL--DLRR 85 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHH--HHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHH--HHHH
Confidence 356788777 6788998888776320016799999986651 1 11 122346788999987643 3444
Q ss_pred hCCCCCCccEEEeCCC
Q 038391 107 LSPKQKGFSVILSDMC 122 (186)
Q Consensus 107 ~~~~~~~~D~V~~d~~ 122 (186)
+ ....+|+|+..+.
T Consensus 86 ~--~~~~~D~vih~A~ 99 (362)
T 3sxp_A 86 L--EKLHFDYLFHQAA 99 (362)
T ss_dssp H--TTSCCSEEEECCC
T ss_pred h--hccCCCEEEECCc
Confidence 4 1357999998654
No 402
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.99 E-value=0.14 Score=42.74 Aligned_cols=78 Identities=14% Similarity=0.033 Sum_probs=43.1
Q ss_pred CCCCCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCC
Q 038391 35 KLIKPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQ 111 (186)
Q Consensus 35 ~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~ 111 (186)
..+++|++||-.|++ .|..+..++... +.+|+++|.++..++..... .... ..|..+.. ...+.... .+
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~-~~ 229 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMA-----GAIPLVTAGSQKKLQMAEKL-GAAA-GFNYKKEDFSEATLKFT-KG 229 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHT-TT
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHc-CCcE-EEecCChHHHHHHHHHh-cC
Confidence 346889999999853 244444555543 57999999988664432110 0111 12333322 12333333 24
Q ss_pred CCccEEEeC
Q 038391 112 KGFSVILSD 120 (186)
Q Consensus 112 ~~~D~V~~d 120 (186)
..+|+++..
T Consensus 230 ~~~d~vi~~ 238 (354)
T 2j8z_A 230 AGVNLILDC 238 (354)
T ss_dssp SCEEEEEES
T ss_pred CCceEEEEC
Confidence 579999974
No 403
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=85.51 E-value=0.98 Score=35.12 Aligned_cols=81 Identities=15% Similarity=0.058 Sum_probs=48.1
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCC-CCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGP-LDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPK 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~-~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~ 110 (186)
++++||-.| |+|+++..+++.+-. . +.+|+.++.++..... .....++.++..|+++... ..+..+...
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456777556 668888888876532 1 5789999887644321 1113467888899876431 111111101
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
-+.+|+|+.++.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 137999998764
No 404
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=85.37 E-value=0.91 Score=36.02 Aligned_cols=82 Identities=13% Similarity=0.028 Sum_probs=50.7
Q ss_pred CCCEEEEEccc-CChHHHHHHHHhCCCCCCCeEEEEeCCCCC---CCC-cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCA-PGAWLQVACQSLGPLDNGGSVVGIDVKKVK---VPS-LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~---i~~-~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|-.|++ +|+++..+++.+-.. +.+|+.++.++.. +.. .....++.++..|+++... ..+......-
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36788888886 478888888877542 6799999988751 111 0111236788889876431 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 83 g~id~lv~nAg 93 (275)
T 2pd4_A 83 GSLDFIVHSVA 93 (275)
T ss_dssp SCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999999864
No 405
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=85.28 E-value=1.4 Score=35.15 Aligned_cols=78 Identities=17% Similarity=0.238 Sum_probs=53.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
.|+.+|--|++.| ++..+++.+-. .|.+|+.+|.+++.+... ...++..++.|+++.. .++.+...-++.|+++
T Consensus 10 ~GK~alVTGas~G-IG~aia~~la~--~Ga~Vv~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~--~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 10 AGQQVLVTGGSSG-IGAAIAMQFAE--LGAEVVALGLDADGVHAP-RHPRIRREELDITDSQ--RLQRLFEALPRLDVLV 83 (242)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESSTTSTTSC-CCTTEEEEECCTTCHH--HHHHHHHHCSCCSEEE
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHhhh-hcCCeEEEEecCCCHH--HHHHHHHhcCCCCEEE
Confidence 4777777777665 66666666543 278999999998887653 3357888889988643 2322222225799999
Q ss_pred eCCC
Q 038391 119 SDMC 122 (186)
Q Consensus 119 ~d~~ 122 (186)
.|..
T Consensus 84 NNAG 87 (242)
T 4b79_A 84 NNAG 87 (242)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9864
No 406
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.26 E-value=1.4 Score=34.73 Aligned_cols=82 Identities=11% Similarity=0.040 Sum_probs=51.1
Q ss_pred CCCEEEEEcccCC-hHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCCCh--hhHhhhCC
Q 038391 39 PGSSVLDLGCAPG-AWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINLPS--NQVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G-~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~~~--~~l~~~~~ 109 (186)
+|+.+|--|++.+ +++..+++.+-. .|.+|+.+|.++..++. .....++.+++.|+++... ..++....
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~--~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ--LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4778888887653 566666665543 17899999998766432 1223468888999887531 11111111
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
.-+..|+++.+..
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 1257999998764
No 407
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.97 E-value=0.83 Score=38.17 Aligned_cols=72 Identities=10% Similarity=0.026 Sum_probs=42.3
Q ss_pred CCCCEEEEEccc--CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCCCCCc
Q 038391 38 KPGSSVLDLGCA--PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPKQKGF 114 (186)
Q Consensus 38 ~~~~~vLDlGcG--~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~~~~~ 114 (186)
++|++||-+|++ .|.....+++.. +.+|+++. ++..++......-..++ |..... ...+.++. ++.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-----Ga~Vi~~~-~~~~~~~~~~lGa~~vi--~~~~~~~~~~v~~~t--~g~~ 232 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-----GYIPIATC-SPHNFDLAKSRGAEEVF--DYRAPNLAQTIRTYT--KNNL 232 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-----TCEEEEEE-CGGGHHHHHHTTCSEEE--ETTSTTHHHHHHHHT--TTCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEe-CHHHHHHHHHcCCcEEE--ECCCchHHHHHHHHc--cCCc
Confidence 789999999983 477777778775 56899885 76664432111111122 222222 12344444 2359
Q ss_pred cEEEe
Q 038391 115 SVILS 119 (186)
Q Consensus 115 D~V~~ 119 (186)
|+|+-
T Consensus 233 d~v~d 237 (371)
T 3gqv_A 233 RYALD 237 (371)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99986
No 408
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=84.85 E-value=2.2 Score=32.67 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=47.7
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCe-EEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARV-QTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~-~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
+.+||-.| |+|+++..+++.+-.. +.+|++++-++..+.... ..++ .++++|++ .. +... -+.+|.|+
T Consensus 21 ~~~ilVtG-atG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~-~~---~~~~---~~~~D~vi 89 (236)
T 3e8x_A 21 GMRVLVVG-ANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELR-ERGASDIVVANLE-ED---FSHA---FASIDAVV 89 (236)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHH-HTTCSEEEECCTT-SC---CGGG---GTTCSEEE
T ss_pred CCeEEEEC-CCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHH-hCCCceEEEcccH-HH---HHHH---HcCCCEEE
Confidence 66888777 5678888888776431 579999998876643211 1257 88899987 21 2122 13799999
Q ss_pred eCCC
Q 038391 119 SDMC 122 (186)
Q Consensus 119 ~d~~ 122 (186)
....
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8764
No 409
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.69 E-value=4.5 Score=30.28 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=47.7
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
+||-.| |+|+++..+++.+-.. +.+|++++-++..+... ...+++++.+|+.+.... .+ ..+|.|+...
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~~---~~----~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADR-LGATVATLVKEPLVLTEA---DL----DSVDAVVDAL 70 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH-TCTTSEEEECCGGGCCHH---HH----TTCSEEEECC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHC--CCEEEEEEecccccccc-cCCCceEEecccccccHh---hc----ccCCEEEECC
Confidence 456556 5688888888776431 57999999876553321 224688999999887642 22 4689999866
Q ss_pred C
Q 038391 122 C 122 (186)
Q Consensus 122 ~ 122 (186)
.
T Consensus 71 g 71 (224)
T 3h2s_A 71 S 71 (224)
T ss_dssp C
T ss_pred c
Confidence 4
No 410
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=84.64 E-value=0.49 Score=33.85 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=45.4
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
.+|+=+|| |.++..+++.+.. .+.+|+++|.++..+..... ..+.++.+|.++.. .+... .-..+|+|++
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~--~l~~a--~i~~ad~vi~ 77 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEE--IMQLA--HLECAKWLIL 77 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHH--HHHHT--TGGGCSEEEE
T ss_pred CCEEEECc--CHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHH--HHHhc--CcccCCEEEE
Confidence 46777777 6677777766543 15799999999987654222 35677888876543 23222 1257899887
No 411
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=84.53 E-value=10 Score=29.87 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=50.0
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------------CCCCCeEEEEeeecCCCh--hhH
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------------HCDARVQTVSADVINLPS--NQV 104 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------------~~~~~~~~~~~d~~~~~~--~~l 104 (186)
.++.+|--|++ |+++..+++.+-. .+.+|+.++.++...... ....++.+++.|+++... ..+
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAAR--DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH--CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 36677777766 5677777766543 167999999887653321 113467888999887531 111
Q ss_pred hhhCCCCCCccEEEeCCC
Q 038391 105 RALSPKQKGFSVILSDMC 122 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~ 122 (186)
......-+.+|+++.+..
T Consensus 82 ~~~~~~~g~iD~lvnnAG 99 (274)
T 3e03_A 82 AATVDTFGGIDILVNNAS 99 (274)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 111111247999999864
No 412
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=84.43 E-value=1.7 Score=34.47 Aligned_cols=81 Identities=14% Similarity=0.070 Sum_probs=49.8
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCC-Ch-hhH-hhhCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINL-PS-NQV-RALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~-~~-~~l-~~~~~ 109 (186)
.+++||--|++ |+++..+++.+-. .+.+|+.++.++..... .....++.++..|+++. .. ..+ ..+..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSS--NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 35667766654 6688887777643 16799999988765322 12234688999999886 31 111 11111
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
..+.+|+++.++.
T Consensus 88 ~~g~iD~lv~nAg 100 (311)
T 3o26_A 88 HFGKLDILVNNAG 100 (311)
T ss_dssp HHSSCCEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 1247999999875
No 413
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.39 E-value=0.82 Score=37.77 Aligned_cols=75 Identities=20% Similarity=0.317 Sum_probs=40.6
Q ss_pred cCCCCCCCEEEEEccc-C-ChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCC-hhhHhhhCCC
Q 038391 34 YKLIKPGSSVLDLGCA-P-GAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLP-SNQVRALSPK 110 (186)
Q Consensus 34 ~~~~~~~~~vLDlGcG-~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~-~~~l~~~~~~ 110 (186)
...+++|++||-.|++ . |.....+++..+ +.+|++++ ++...+....... .++ | .+.. ...+.++.
T Consensus 137 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g----~~~V~~~~-~~~~~~~~~~ga~-~~~--~-~~~~~~~~~~~~~-- 205 (349)
T 4a27_A 137 VANLREGMSVLVHSAGGGVGQAVAQLCSTVP----NVTVFGTA-STFKHEAIKDSVT-HLF--D-RNADYVQEVKRIS-- 205 (349)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHTTST----TCEEEEEE-CGGGHHHHGGGSS-EEE--E-TTSCHHHHHHHHC--
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC----CcEEEEeC-CHHHHHHHHcCCc-EEE--c-CCccHHHHHHHhc--
Confidence 3457899999999984 2 444444554432 46899998 4444322221111 111 2 2222 23344443
Q ss_pred CCCccEEEe
Q 038391 111 QKGFSVILS 119 (186)
Q Consensus 111 ~~~~D~V~~ 119 (186)
++.+|+|+-
T Consensus 206 ~~g~Dvv~d 214 (349)
T 4a27_A 206 AEGVDIVLD 214 (349)
T ss_dssp TTCEEEEEE
T ss_pred CCCceEEEE
Confidence 468999986
No 414
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=83.58 E-value=6.8 Score=30.58 Aligned_cols=71 Identities=20% Similarity=0.206 Sum_probs=49.5
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeC
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSD 120 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d 120 (186)
++||-.| |+|+++..+++.+... +.+|+++|.++.... ..++.++.+|+++.. .+..+. ..+|+|+.+
T Consensus 4 k~vlVTG-asg~IG~~la~~L~~~--G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~--~~~~~~---~~~D~vi~~ 71 (267)
T 3rft_A 4 KRLLVTG-AAGQLGRVMRERLAPM--AEILRLADLSPLDPA----GPNEECVQCDLADAN--AVNAMV---AGCDGIVHL 71 (267)
T ss_dssp EEEEEES-TTSHHHHHHHHHTGGG--EEEEEEEESSCCCCC----CTTEEEEECCTTCHH--HHHHHH---TTCSEEEEC
T ss_pred CEEEEEC-CCCHHHHHHHHHHHhc--CCEEEEEecCCcccc----CCCCEEEEcCCCCHH--HHHHHH---cCCCEEEEC
Confidence 3555555 4688999999887542 568999999876644 356889999987643 344443 378999987
Q ss_pred CCC
Q 038391 121 MCP 123 (186)
Q Consensus 121 ~~~ 123 (186)
+..
T Consensus 72 Ag~ 74 (267)
T 3rft_A 72 GGI 74 (267)
T ss_dssp CSC
T ss_pred CCC
Confidence 643
No 415
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=83.37 E-value=1 Score=42.03 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=43.4
Q ss_pred CCCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCCC
Q 038391 36 LIKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQK 112 (186)
Q Consensus 36 ~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~~ 112 (186)
.+++|++||=.|+ | .|.....+++.+ |.+|++++-++ .......... .++ |..+..+ ..+.+.+ .+.
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~-----Ga~V~~t~~~~-k~~~l~lga~-~v~--~~~~~~~~~~i~~~t-~g~ 411 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHL-----GAEVYATASED-KWQAVELSRE-HLA--SSRTCDFEQQFLGAT-GGR 411 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHT-----TCCEEEECCGG-GGGGSCSCGG-GEE--CSSSSTHHHHHHHHS-CSS
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHc-----CCEEEEEeChH-HhhhhhcChh-hee--ecCChhHHHHHHHHc-CCC
Confidence 3688999999985 3 477788888876 57899998655 3221111111 111 2222221 2334444 356
Q ss_pred CccEEEe
Q 038391 113 GFSVILS 119 (186)
Q Consensus 113 ~~D~V~~ 119 (186)
.+|+|+-
T Consensus 412 GvDvVld 418 (795)
T 3slk_A 412 GVDVVLN 418 (795)
T ss_dssp CCSEEEE
T ss_pred CeEEEEE
Confidence 8999997
No 416
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.37 E-value=0.47 Score=38.74 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=27.5
Q ss_pred CCCCCCCEEEEEc-ccC-ChHHHHHHHHhCCCCCCCeEEEEeC
Q 038391 35 KLIKPGSSVLDLG-CAP-GAWLQVACQSLGPLDNGGSVVGIDV 75 (186)
Q Consensus 35 ~~~~~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~~~~v~gvDi 75 (186)
..+++|++||-+| +|+ |..+..+++.. +.+|++++-
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-----Ga~vi~~~~ 185 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK-----GTTVITTAS 185 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEEC
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc-----CCEEEEEec
Confidence 4478999999996 664 77777777775 468999873
No 417
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=83.17 E-value=0.34 Score=39.27 Aligned_cols=82 Identities=13% Similarity=0.037 Sum_probs=48.7
Q ss_pred CCCEEEEEcccCC-hHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPG-AWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G-~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|--|++.| +++..+++.+-. .+.+|+.++.++...+. .....++.+++.|+++... ..+......-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE--AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH--TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 4678888888754 467666666533 16789999887532111 1111357788899887531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.++.
T Consensus 108 g~iD~lVnnAG 118 (293)
T 3grk_A 108 GKLDFLVHAIG 118 (293)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999999864
No 418
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=82.75 E-value=5.2 Score=31.37 Aligned_cols=80 Identities=8% Similarity=-0.017 Sum_probs=49.0
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCC---CCC-----cCCCCCeEEEEeeecCCCh-h-hHhhhCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVK---VPS-----LHCDARVQTVSADVINLPS-N-QVRALSP 109 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~---i~~-----~~~~~~~~~~~~d~~~~~~-~-~l~~~~~ 109 (186)
++++|--|++ |+++..+++.+-.. +.+|+.++.+... +.. .....++.+++.|+++... . .+.....
T Consensus 11 ~k~vlVTGas-~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 11 NKVIVIAGGI-KNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 5677776755 66888888887652 6799998765432 111 1223568888999887531 1 1111111
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
.-+.+|+++.+..
T Consensus 88 ~~g~iD~lvnnAg 100 (262)
T 3ksu_A 88 EFGKVDIAINTVG 100 (262)
T ss_dssp HHCSEEEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1147999999865
No 419
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=82.71 E-value=3.3 Score=31.95 Aligned_cols=75 Identities=20% Similarity=0.088 Sum_probs=46.6
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCC------CC
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSP------KQ 111 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~------~~ 111 (186)
..++++|-.|+ +|+++..+++.+-.. +.+|+.++.++..... ...++..|+++.. .+..+.. ..
T Consensus 5 ~~~k~vlVTGa-s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~--~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 5 GEARRVLVYGG-RGALGSRCVQAFRAR--NWWVASIDVVENEEAS-----ASVIVKMTDSFTE--QADQVTAEVGKLLGD 74 (241)
T ss_dssp -CCCEEEEETT-TSHHHHHHHHHHHTT--TCEEEEEESSCCTTSS-----EEEECCCCSCHHH--HHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHhC--CCEEEEEeCChhhccC-----CcEEEEcCCCCHH--HHHHHHHHHHHHhCC
Confidence 35667887774 566888888776542 6799999988765432 3455567776532 1211110 01
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 75 g~iD~lv~~Ag 85 (241)
T 1dhr_A 75 QKVDAILCVAG 85 (241)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEEccc
Confidence 47999999864
No 420
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=82.61 E-value=1.1 Score=35.18 Aligned_cols=82 Identities=15% Similarity=0.041 Sum_probs=49.1
Q ss_pred CCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCC---CCC-cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVK---VPS-LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~---i~~-~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|-.|++. |+++..+++.+-.. +.+|+.++.++.. +.. .....+..+++.|+++... ..+......-
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 356788888763 77888888776431 6799999987721 110 0111234678888876431 1222222223
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 86 g~iD~lv~~Ag 96 (265)
T 1qsg_A 86 PKFDGFVHSIG 96 (265)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999999764
No 421
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=82.11 E-value=13 Score=28.54 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=47.8
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-hhHhhhCCCCCCccEEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-NQVRALSPKQKGFSVIL 118 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~~l~~~~~~~~~~D~V~ 118 (186)
++++|--|++ |+++..+++.+-.. .+.+|+.+|.++..- ..++.+++.|+++... ..+..... .+.+|+++
T Consensus 4 ~k~vlITGas-~gIG~~~a~~l~~~-~g~~v~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~-~~~id~lv 75 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVELLLQN-KNHTVINIDIQQSFS-----AENLKFIKADLTKQQDITNVLDIIK-NVSFDGIF 75 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHTTS-TTEEEEEEESSCCCC-----CTTEEEEECCTTCHHHHHHHHHHTT-TCCEEEEE
T ss_pred CCeEEEeCCC-ChHHHHHHHHHHhc-CCcEEEEeccccccc-----cccceEEecCcCCHHHHHHHHHHHH-hCCCCEEE
Confidence 4566766654 66888888777431 256899999877631 1347888899886531 22222222 45899999
Q ss_pred eCCC
Q 038391 119 SDMC 122 (186)
Q Consensus 119 ~d~~ 122 (186)
.+..
T Consensus 76 ~nAg 79 (244)
T 4e4y_A 76 LNAG 79 (244)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9875
No 422
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=81.94 E-value=4.3 Score=31.56 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=44.1
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~V 117 (186)
+++||-.|++ |+++..+++.+-. .+.+|++++.++..... ..+..|+++... ..+.......+.+|++
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~--~G~~V~~~~r~~~~~~~-------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l 91 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKS--KSWNTISIDFRENPNAD-------HSFTIKDSGEEEIKSVIEKINSKSIKVDTF 91 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESSCCTTSS-------EEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCcccccc-------cceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4577777765 5677777776643 16799999998876543 234455444321 1222222223589999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.++.
T Consensus 92 i~~Ag 96 (251)
T 3orf_A 92 VCAAG 96 (251)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 98764
No 423
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=81.93 E-value=5.4 Score=29.49 Aligned_cols=63 Identities=16% Similarity=0.230 Sum_probs=41.2
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
+||-.|+ +|+++..+++.+- . +.+|++++-++. ++..|+.+.. .+..+...-+++|.|+.+.
T Consensus 5 ~vlVtGa-sg~iG~~~~~~l~-~--g~~V~~~~r~~~------------~~~~D~~~~~--~~~~~~~~~~~~d~vi~~a 66 (202)
T 3d7l_A 5 KILLIGA-SGTLGSAVKERLE-K--KAEVITAGRHSG------------DVTVDITNID--SIKKMYEQVGKVDAIVSAT 66 (202)
T ss_dssp EEEEETT-TSHHHHHHHHHHT-T--TSEEEEEESSSS------------SEECCTTCHH--HHHHHHHHHCCEEEEEECC
T ss_pred EEEEEcC-CcHHHHHHHHHHH-C--CCeEEEEecCcc------------ceeeecCCHH--HHHHHHHHhCCCCEEEECC
Confidence 6777774 6889999998876 3 689999987764 3456776532 2222211013689999876
Q ss_pred C
Q 038391 122 C 122 (186)
Q Consensus 122 ~ 122 (186)
.
T Consensus 67 g 67 (202)
T 3d7l_A 67 G 67 (202)
T ss_dssp C
T ss_pred C
Confidence 4
No 424
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=80.98 E-value=0.33 Score=41.81 Aligned_cols=37 Identities=5% Similarity=-0.120 Sum_probs=27.5
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCe----EEEEeCCCCCC
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGS----VVGIDVKKVKV 80 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~----v~gvDis~~~i 80 (186)
-+|+|++||.|+....+-+.-.+ -.- |.++|+++.++
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~---~~~~~~~v~avEid~~A~ 51 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARS---KNWEIQHSGMVEWFVDAI 51 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHH---HTEEEEEEEEECCBHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCc---cccceeeEEEEecCHHHH
Confidence 38999999999999988775100 012 78899999764
No 425
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.91 E-value=0.97 Score=35.83 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=48.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC------------C-----cCCCCCeEEEEeeecCCCh
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVP------------S-----LHCDARVQTVSADVINLPS 101 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~------------~-----~~~~~~~~~~~~d~~~~~~ 101 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.+|.+...-. . .....++.+++.|+++...
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE--EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH--CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 35677777765 5677777766543 1679999998743211 0 1123568888999887531
Q ss_pred --hhHhhhCCCCCCccEEEeCCC
Q 038391 102 --NQVRALSPKQKGFSVILSDMC 122 (186)
Q Consensus 102 --~~l~~~~~~~~~~D~V~~d~~ 122 (186)
..+......-+.+|+++.+..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 111111111247999999865
No 426
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=80.53 E-value=4 Score=33.77 Aligned_cols=55 Identities=20% Similarity=0.144 Sum_probs=40.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEe
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSA 94 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~ 94 (186)
.+..|+-+|||+|.....+++.++..+...+.+.+|..+..... ....++++++.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l-~~~~NV~li~~ 114 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPIL-NGLRDVTLVTR 114 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGG-TTCTTEEEEEC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhh-cCCCcEEEEec
Confidence 46799999999999999999987642234699999997765221 12256777765
No 427
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.20 E-value=0.62 Score=33.01 Aligned_cols=71 Identities=24% Similarity=0.230 Sum_probs=46.6
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
..+|+-+|| |.++..+++.+.. .+.+|+++|.++..+..... ....++.+|.++.. .+... .-..+|.|+.
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~--~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~--~l~~~--~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA--AGKKVLAVDKSKEKIELLED-EGFDAVIADPTDES--FYRSL--DLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHH--HHHHS--CCTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHH--CCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHH--HHHhC--CcccCCEEEE
Confidence 357888887 6688888777643 15689999999877543221 24677888876542 33333 1357899887
No 428
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=79.70 E-value=0.75 Score=36.22 Aligned_cols=82 Identities=12% Similarity=0.083 Sum_probs=48.5
Q ss_pred CCCEEEEEccc-CChHHHHHHHHhCCCCCCCeEEEEeCCCCC---CCC-cCCCCCeEEEEeeecCCCh-h-hHhhhCCCC
Q 038391 39 PGSSVLDLGCA-PGAWLQVACQSLGPLDNGGSVVGIDVKKVK---VPS-LHCDARVQTVSADVINLPS-N-QVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG-~G~~~~~l~~~~~~~~~~~~v~gvDis~~~---i~~-~~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~ 111 (186)
.++++|-.|++ +|+++..+++.+-.. +.+|+.++.++.. +.. .....++.++..|+++... . .+......-
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36788888886 377888777765431 5799999987641 111 0111236788889886431 1 111111011
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 85 g~iD~lv~~Ag 95 (261)
T 2wyu_A 85 GGLDYLVHAIA 95 (261)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999764
No 429
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.67 E-value=3.2 Score=33.54 Aligned_cols=80 Identities=11% Similarity=0.054 Sum_probs=48.7
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCC-----CCcCCCCCeEEEEeeecCCChhhHhhhCCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKV-----PSLHCDARVQTVSADVINLPSNQVRALSPKQKG 113 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i-----~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~ 113 (186)
.+.+||-.| |+|+++..+++.+-..+...+|+++|.....- .......++.++.+|+.+.. .+..... +..
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~--~~~~~~~-~~~ 98 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGE--LLEHVIK-ERD 98 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHH--HHHHHHH-HHT
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHH--HHHHHHh-hcC
Confidence 356788777 67888888887764321136899998765321 11222357999999987643 2222221 225
Q ss_pred ccEEEeCCC
Q 038391 114 FSVILSDMC 122 (186)
Q Consensus 114 ~D~V~~d~~ 122 (186)
+|+|+..+.
T Consensus 99 ~d~Vih~A~ 107 (346)
T 4egb_A 99 VQVIVNFAA 107 (346)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 899987554
No 430
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.29 E-value=2.7 Score=32.96 Aligned_cols=81 Identities=12% Similarity=0.115 Sum_probs=48.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCCh--hhHhhhCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPS--NQVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~--~~l~~~~~ 109 (186)
.++++|-.|+ +|+++..+++.+-. .+.+|+.++.++..... .....++.++..|+++... ..+.....
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLL--KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 4567777775 56778777776643 16799999987644221 1112457888899876431 11111110
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
.-+.+|+++.+..
T Consensus 83 ~~g~id~lv~~Ag 95 (267)
T 2gdz_A 83 HFGRLDILVNNAG 95 (267)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1146899998764
No 431
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=79.13 E-value=1.2 Score=34.99 Aligned_cols=81 Identities=11% Similarity=0.091 Sum_probs=47.0
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEE-eCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGI-DVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPK 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gv-Dis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~ 110 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.+ +.++..... .....++.+++.|+++... ..+......
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQ--EGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36677777755 5577777766543 16789888 544433221 1223568888999887531 111111111
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
-+.+|+++.+..
T Consensus 84 ~g~id~lv~nAg 95 (259)
T 3edm_A 84 FGEIHGLVHVAG 95 (259)
T ss_dssp HCSEEEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 147999998764
No 432
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=78.78 E-value=2.7 Score=34.67 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=28.9
Q ss_pred CCCCCC-CEEEEEcc-cC-ChHHHHHHHHhCCCCCCCeEEEEeCCCC
Q 038391 35 KLIKPG-SSVLDLGC-AP-GAWLQVACQSLGPLDNGGSVVGIDVKKV 78 (186)
Q Consensus 35 ~~~~~~-~~vLDlGc-G~-G~~~~~l~~~~~~~~~~~~v~gvDis~~ 78 (186)
..+++| ++||-.|+ |+ |..+..+++.+ +.+|+++.-++.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-----Ga~vi~~~~~~~ 203 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL-----NFNSISVIRDRP 203 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH-----TCEEEEEECCCT
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC-----CCEEEEEecCcc
Confidence 347889 99999997 43 66777777776 468888875554
No 433
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=78.65 E-value=8.1 Score=30.83 Aligned_cols=76 Identities=18% Similarity=0.127 Sum_probs=46.6
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCC--C---CCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKV--K---VPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~--~---i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
.+||-.| |+|+++..+++.+-..+.+.+|+++|..+. . +.......++.++.+|+.+.. .+.... ..+|
T Consensus 4 m~vlVTG-atG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~---~~~d 77 (336)
T 2hun_A 4 MKLLVTG-GMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYE--LVKELV---RKVD 77 (336)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHH--HHHHHH---HTCS
T ss_pred CeEEEEC-CCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHH--HHHHHh---hCCC
Confidence 4677666 578888888877643211368999997642 1 111111346888899987642 333332 4689
Q ss_pred EEEeCCC
Q 038391 116 VILSDMC 122 (186)
Q Consensus 116 ~V~~d~~ 122 (186)
+|+..+.
T Consensus 78 ~vih~A~ 84 (336)
T 2hun_A 78 GVVHLAA 84 (336)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9988653
No 434
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=78.63 E-value=23 Score=28.41 Aligned_cols=74 Identities=16% Similarity=0.109 Sum_probs=48.0
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCC-----CeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNG-----GSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~-----~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
.+||-.| |+|+++..+++.+-.. + .+|++++-++.... ....+++++.+|+.+.. .+.........+|
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~--~~~~~~~~~~~~d 74 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPD--DSQAKLSPLTDVT 74 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHH--HHHHHHTTCTTCC
T ss_pred CEEEEEC-CCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHH--HHHHHHhcCCCCC
Confidence 3566555 5799999999987652 4 68999998776543 12346888899987542 3333321111389
Q ss_pred EEEeCC
Q 038391 116 VILSDM 121 (186)
Q Consensus 116 ~V~~d~ 121 (186)
.|+..+
T Consensus 75 ~vih~a 80 (364)
T 2v6g_A 75 HVFYVT 80 (364)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 998754
No 435
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=78.12 E-value=2.4 Score=33.07 Aligned_cols=81 Identities=16% Similarity=0.141 Sum_probs=46.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCCh--hhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPS--NQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~ 114 (186)
.++.+|--|++ |+++..+++.+-. .+.+|+.+|.++...+.. ....++.+++.|+++... ..+......-+.+
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQ--EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH--TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH--CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35677777765 5577777766543 167999999988775442 223467888899886531 1111111112479
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.+..
T Consensus 83 d~lv~nAg 90 (257)
T 3tpc_A 83 HGLVNCAG 90 (257)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999864
No 436
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=78.06 E-value=1.3 Score=35.27 Aligned_cols=82 Identities=15% Similarity=0.044 Sum_probs=49.3
Q ss_pred CCCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCCCC---CCC-cCCCCCeEEEEeeecCCCh-h-hHhhhCCCC
Q 038391 39 PGSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKKVK---VPS-LHCDARVQTVSADVINLPS-N-QVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~~~---i~~-~~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~ 111 (186)
.++++|-.|+++ |+++..+++.+-.. +.+|+.++.++.. +.. .....++.++..|+++... . .+......-
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888888863 77888888776431 6799999987641 111 0111236778888876431 1 111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 98 g~iD~lv~~Ag 108 (285)
T 2p91_A 98 GSLDIIVHSIA 108 (285)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999864
No 437
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.98 E-value=3.2 Score=32.62 Aligned_cols=68 Identities=24% Similarity=0.238 Sum_probs=47.2
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
..+||-.| + |+++..+++.+-.. +.+|++++-++..+. .+++++.+|+.+.. .+.... .+++|.|+.
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-----~~~~~~~~Dl~d~~--~~~~~~--~~~~d~vih 69 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTAQ--GHEVTGLRRSAQPMP-----AGVQTLIADVTRPD--TLASIV--HLRPEILVY 69 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHHT--TCCEEEEECTTSCCC-----TTCCEEECCTTCGG--GCTTGG--GGCCSEEEE
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHHC--CCEEEEEeCCccccc-----cCCceEEccCCChH--HHHHhh--cCCCCEEEE
Confidence 35788888 4 99999999877431 568999998876542 56888999987643 222222 235999987
Q ss_pred C
Q 038391 120 D 120 (186)
Q Consensus 120 d 120 (186)
.
T Consensus 70 ~ 70 (286)
T 3gpi_A 70 C 70 (286)
T ss_dssp C
T ss_pred e
Confidence 4
No 438
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=77.86 E-value=7.8 Score=30.66 Aligned_cols=80 Identities=13% Similarity=0.171 Sum_probs=51.7
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh-h-hHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS-N-QVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~ 111 (186)
.++++|--|+ +|+++..+++.+-. .+.+|+.+|.++..+.. .....++.+++.|+++... . .+..... .
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~ 107 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAG--AGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA-I 107 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH--TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH-H
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH-h
Confidence 4667776664 56677777776643 16799999998877543 1224578889999987652 1 1111111 1
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.++.
T Consensus 108 g~iD~lvnnAg 118 (275)
T 4imr_A 108 APVDILVINAS 118 (275)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999999875
No 439
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=77.84 E-value=4.1 Score=31.82 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=51.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
+++++|-.|++ |+++..+++.+-. .|.+|+.+|.++..+.. .....++.+++.|+++... ..+......
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAA--EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 45677777766 5577777766543 16799999998876543 1123578888999887531 112222212
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 82 g~id~lv~nAg 92 (252)
T 3h7a_A 82 APLEVTIFNVG 92 (252)
T ss_dssp SCEEEEEECCC
T ss_pred CCceEEEECCC
Confidence 57999999865
No 440
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=77.69 E-value=5.7 Score=30.09 Aligned_cols=72 Identities=19% Similarity=0.170 Sum_probs=45.1
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~V 117 (186)
+++||-.|+ +|+++..+++.+-. .+.+|+.++.++. .. ++.+++.|+++... ..+... ...+.+|.+
T Consensus 2 ~k~vlVtGa-sggiG~~la~~l~~--~G~~V~~~~r~~~-~~------~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~l 70 (242)
T 1uay_A 2 ERSALVTGG-ASGLGRAAALALKA--RGYRVVVLDLRRE-GE------DLIYVEGDVTREEDVRRAVARA-QEEAPLFAV 70 (242)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH--HTCEEEEEESSCC-SS------SSEEEECCTTCHHHHHHHHHHH-HHHSCEEEE
T ss_pred CCEEEEeCC-CChHHHHHHHHHHH--CCCEEEEEccCcc-cc------ceEEEeCCCCCHHHHHHHHHHH-HhhCCceEE
Confidence 456777775 57788777766533 1579999998876 22 35788888876431 111111 112378999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 71 i~~ag 75 (242)
T 1uay_A 71 VSAAG 75 (242)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 88754
No 441
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=77.15 E-value=1.1 Score=36.05 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=47.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCC--CCC-----cCCCCCeEEEEeeecCCCh-h-hHhhhCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVK--VPS-----LHCDARVQTVSADVINLPS-N-QVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~--i~~-----~~~~~~~~~~~~d~~~~~~-~-~l~~~~~ 109 (186)
+++++|--|+ +|+++..+++.+-. .|.+|+.++.+... ... .....++.+++.|+++... . .+.....
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAR--EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH--CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567777775 56677777776643 16799999886331 111 1223467888888876531 1 1111111
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
.-+.+|+++.+..
T Consensus 125 ~~g~iD~lv~nAg 137 (294)
T 3r3s_A 125 ALGGLDILALVAG 137 (294)
T ss_dssp HHTCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247999999865
No 442
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=77.09 E-value=1.2 Score=29.88 Aligned_cols=72 Identities=19% Similarity=0.153 Sum_probs=46.6
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCC-CeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNG-GSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~-~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
+.+|+-+|+ |.++..+++.+... + .+|+++|.++..+.... ...+.+...|..+. ..+.... ..+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~--~~~~~~~---~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTS--SNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE--AGLAKAL---GGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH--HHHHHHT---TTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH--HHHHHHH---cCCCEEE
Confidence 458898988 77888777665431 4 68999999886644322 23466677776543 2343433 3789998
Q ss_pred eCC
Q 038391 119 SDM 121 (186)
Q Consensus 119 ~d~ 121 (186)
...
T Consensus 75 ~~~ 77 (118)
T 3ic5_A 75 SAA 77 (118)
T ss_dssp ECS
T ss_pred ECC
Confidence 743
No 443
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=77.02 E-value=4.9 Score=33.08 Aligned_cols=40 Identities=18% Similarity=0.369 Sum_probs=27.8
Q ss_pred HcCCCCCCCEEEEEcc-c-CChHHHHHHHHhCCCCCCCeEEEE-eCCC
Q 038391 33 QYKLIKPGSSVLDLGC-A-PGAWLQVACQSLGPLDNGGSVVGI-DVKK 77 (186)
Q Consensus 33 ~~~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~~~~v~gv-Dis~ 77 (186)
....+++|++||-+|+ | .|..+..+++.+ +.+++++ +..+
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-----Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAAL-----GLRTINVVRDRP 203 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEECCCS
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHc-----CCEEEEEecCcc
Confidence 3345789999999997 3 477777888876 4566555 4444
No 444
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=76.28 E-value=0.58 Score=38.68 Aligned_cols=38 Identities=5% Similarity=0.049 Sum_probs=23.5
Q ss_pred CC-CEEEEEcccCCh---HHHHHHHHhCCCCCCCeEEEEeCCCCCCCC
Q 038391 39 PG-SSVLDLGCAPGA---WLQVACQSLGPLDNGGSVVGIDVKKVKVPS 82 (186)
Q Consensus 39 ~~-~~vLDlGcG~G~---~~~~l~~~~~~~~~~~~v~gvDis~~~i~~ 82 (186)
++ .+|| +..|+|. .+..+++.. +.+|+++|.++..++.
T Consensus 163 ~g~~~vl-i~gg~g~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~ 204 (349)
T 3pi7_A 163 EGEKAFV-MTAGASQLCKLIIGLAKEE-----GFRPIVTVRRDEQIAL 204 (349)
T ss_dssp HCCSEEE-ESSTTSHHHHHHHHHHHHH-----TCEEEEEESCGGGHHH
T ss_pred CCCCEEE-EeCCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHH
Confidence 45 4555 5334444 444555554 5799999998877544
No 445
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=76.23 E-value=1.8 Score=34.57 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=51.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCChhhHhhhCCCCCCccE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPSNQVRALSPKQKGFSV 116 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~ 116 (186)
+++++|--|++ |+++..+++.+-. .+.+|+.++.++..... .....++.+++.|+++.. .+..+...-+.+|+
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELAR--RGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLS--SVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHH--HHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHH--HHHHHHHhcCCCCE
Confidence 36677777755 6678777776643 16799999988765432 122357888899988653 23232211257899
Q ss_pred EEeCCC
Q 038391 117 ILSDMC 122 (186)
Q Consensus 117 V~~d~~ 122 (186)
++.++.
T Consensus 90 lv~nAg 95 (291)
T 3rd5_A 90 LINNAG 95 (291)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 999864
No 446
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=75.92 E-value=3.5 Score=33.30 Aligned_cols=74 Identities=19% Similarity=0.158 Sum_probs=49.3
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc----CC------CCCeEEEEeeecCCChhhHhhhCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL----HC------DARVQTVSADVINLPSNQVRALSP 109 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~----~~------~~~~~~~~~d~~~~~~~~l~~~~~ 109 (186)
+.+||-.| |+|+++..+++.+-.. +.+|++++-++...... .. ..+++++.+|+.+.. .+....
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~- 98 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLT--TCEQVM- 98 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHH--HHHHHT-
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHH--HHHHHh-
Confidence 56888777 5788998888776431 57999999876542210 00 057899999987542 344443
Q ss_pred CCCCccEEEeCC
Q 038391 110 KQKGFSVILSDM 121 (186)
Q Consensus 110 ~~~~~D~V~~d~ 121 (186)
..+|+|+..+
T Consensus 99 --~~~d~Vih~A 108 (351)
T 3ruf_A 99 --KGVDHVLHQA 108 (351)
T ss_dssp --TTCSEEEECC
T ss_pred --cCCCEEEECC
Confidence 2799998754
No 447
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=75.82 E-value=8.2 Score=29.23 Aligned_cols=74 Identities=20% Similarity=0.137 Sum_probs=48.4
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCC--eEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGG--SVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~--~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
+.+||-.|+ +|+++..+++.+-.. +. +|++++-++..+.... ..++.++.+|+.+.. .+.... ..+|+|
T Consensus 18 ~~~vlVtGa-sg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~--~~~~~~---~~~d~v 88 (242)
T 2bka_A 18 NKSVFILGA-SGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLD--DYASAF---QGHDVG 88 (242)
T ss_dssp CCEEEEECT-TSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGG--GGGGGG---SSCSEE
T ss_pred CCeEEEECC-CcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHH--HHHHHh---cCCCEE
Confidence 567887774 577887777665321 45 8999998877654321 235788889987643 233332 368999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 89 i~~ag 93 (242)
T 2bka_A 89 FCCLG 93 (242)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98653
No 448
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=75.80 E-value=9.7 Score=29.78 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=48.7
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh-h-hHhhhCCCCCCccE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS-N-QVRALSPKQKGFSV 116 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~~~~D~ 116 (186)
.++++|--|+ +|+++..+++.+-. .+.+|+.++.+...... .++.+++.|+++... . .+......-+.+|+
T Consensus 27 ~~k~vlVTGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 99 (260)
T 3un1_A 27 QQKVVVITGA-SQGIGAGLVRAYRD--RNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDS 99 (260)
T ss_dssp TCCEEEESSC-SSHHHHHHHHHHHH--TTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH--CCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence 3567776664 56678777776643 16799999988765432 368888999887531 1 11111111147999
Q ss_pred EEeCCC
Q 038391 117 ILSDMC 122 (186)
Q Consensus 117 V~~d~~ 122 (186)
++.++.
T Consensus 100 lv~nAg 105 (260)
T 3un1_A 100 LVNNAG 105 (260)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999764
No 449
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=75.75 E-value=2.7 Score=32.92 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=50.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPS--NQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~ 114 (186)
.++++|--|+ +|+++..+++.+-. .+.+|+.+|.++..+.. .....++.+++.|+++... ..+......-+.+
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVR--EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 3567777774 56678777776643 16799999987765432 1123467888899886531 1111111112479
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.+..
T Consensus 84 d~lv~~Ag 91 (259)
T 4e6p_A 84 DILVNNAA 91 (259)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999865
No 450
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=75.73 E-value=1.9 Score=33.88 Aligned_cols=81 Identities=12% Similarity=0.151 Sum_probs=50.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.+++||-.|+ +|+++..+++.+-. .+.+|+.++.++..+.. .....++.++..|+++... ..+.......
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGS--LGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4667777775 56788888877643 16799999988765432 1123467888899876531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 105 g~id~lv~~Ag 115 (262)
T 3rkr_A 105 GRCDVLVNNAG 115 (262)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999998765
No 451
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=75.66 E-value=2.9 Score=33.61 Aligned_cols=78 Identities=13% Similarity=0.005 Sum_probs=50.0
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhhhCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRALSPKQK 112 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 112 (186)
.+.+||-.| |+|+++..+++.+-. .+.+|++++.++...... ....++.++.+|+.+.. .+..+.. ..
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~~-~~ 77 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLA--HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDER--ALARIFD-AH 77 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHH--TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHH--HHHHHHH-HS
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHH--CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHH--HHHHHHh-cc
Confidence 355777666 678899888877643 167999999877654321 01246788888887643 2333321 23
Q ss_pred CccEEEeCCC
Q 038391 113 GFSVILSDMC 122 (186)
Q Consensus 113 ~~D~V~~d~~ 122 (186)
.+|+|+..+.
T Consensus 78 ~~d~vih~A~ 87 (341)
T 3enk_A 78 PITAAIHFAA 87 (341)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECcc
Confidence 7899987553
No 452
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=75.61 E-value=3.8 Score=31.74 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=48.4
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCe-EEEEeCCCCC--CCC---cCCCCCeEEEEeeecCC-C-hh-hHhhhCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGS-VVGIDVKKVK--VPS---LHCDARVQTVSADVINL-P-SN-QVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~-v~gvDis~~~--i~~---~~~~~~~~~~~~d~~~~-~-~~-~l~~~~~ 109 (186)
+++++|-.|+ +|+++..+++.+-.. +.+ |+.++.++.. +.. .....++.++..|+++. . .. .+.....
T Consensus 4 ~~k~vlVtGa-s~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 4 TNKNVIFVAA-LGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEECC-CChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence 3567887775 678888888776431 455 8999887632 111 11134678888998875 3 11 1111110
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
.-+.+|+++.+..
T Consensus 81 ~~g~id~lv~~Ag 93 (254)
T 1sby_A 81 QLKTVDILINGAG 93 (254)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 1147899998764
No 453
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=75.57 E-value=1.2 Score=35.40 Aligned_cols=81 Identities=12% Similarity=0.184 Sum_probs=49.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|--| |+|+++..+++.+-. .+.+|+.+|.++..+.. .....++.+++.|+++... ..+.......
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAV--AGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 356677666 556688888777643 16799999987755332 1123467888888876531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 102 g~iD~lv~nAg 112 (271)
T 4ibo_A 102 IDVDILVNNAG 112 (271)
T ss_dssp CCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999865
No 454
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=75.49 E-value=4 Score=32.13 Aligned_cols=80 Identities=16% Similarity=0.148 Sum_probs=47.0
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCC-CCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVK-VPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~-i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
++++|--|+ +|+++..+++.+-. .+.+|+.++..... ... .....++.+++.|+++... ..+......-
T Consensus 18 ~k~~lVTGa-s~gIG~aia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 18 GKVALVTGS-GRGIGAAVAVHLGR--LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TCEEEESCT-TSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 566776665 46677777776643 16799988765432 111 1223568888999887531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 95 g~id~lvnnAg 105 (270)
T 3is3_A 95 GHLDIAVSNSG 105 (270)
T ss_dssp SCCCEEECCCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 455
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=74.98 E-value=1.5 Score=34.87 Aligned_cols=81 Identities=14% Similarity=0.074 Sum_probs=49.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cC---CCCCeEEEEeeecCCCh--hhHhhhC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LH---CDARVQTVSADVINLPS--NQVRALS 108 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~---~~~~~~~~~~d~~~~~~--~~l~~~~ 108 (186)
.++++|--|+ +|+++..+++.+-. .+.+|+.+|.++..+.. .. ...++.+++.|+++... ..+....
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVA--AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 3667777775 56677777776543 16799999988765322 11 11268888999887531 1111111
Q ss_pred CCCCCccEEEeCCC
Q 038391 109 PKQKGFSVILSDMC 122 (186)
Q Consensus 109 ~~~~~~D~V~~d~~ 122 (186)
...+.+|+++.+..
T Consensus 87 ~~~g~id~lv~nAg 100 (281)
T 3svt_A 87 AWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998765
No 456
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=74.48 E-value=4 Score=31.40 Aligned_cols=80 Identities=13% Similarity=0.189 Sum_probs=50.1
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQK 112 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~ 112 (186)
++++|-.| |+|+++..+++.+-.. +.+|+.++.++..+.. .....++.+++.|+++... ..+.......+
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55666666 5567787777776432 6799999988765332 1123468888999886531 11222221235
Q ss_pred CccEEEeCCC
Q 038391 113 GFSVILSDMC 122 (186)
Q Consensus 113 ~~D~V~~d~~ 122 (186)
.+|+++.+..
T Consensus 82 ~id~li~~Ag 91 (247)
T 3lyl_A 82 AIDILVNNAG 91 (247)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999764
No 457
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=74.23 E-value=1.1 Score=35.90 Aligned_cols=81 Identities=10% Similarity=0.026 Sum_probs=50.3
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCCh--hhHhhhCCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPS--NQVRALSPKQK 112 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~ 112 (186)
+|+.+|--|++.| ++..+++.+-. .|.+|+.+|.++...+. .....+..+++.|+++... ..+......-+
T Consensus 6 ~gKvalVTGas~G-IG~aia~~la~--~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 6 QDKVVIVTGGASG-IGGAISMRLAE--ERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH--cCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 4667777776665 66666655543 27899999988776322 2234568888999887531 11111111125
Q ss_pred CccEEEeCCC
Q 038391 113 GFSVILSDMC 122 (186)
Q Consensus 113 ~~D~V~~d~~ 122 (186)
+.|+++.|..
T Consensus 83 ~iDiLVNnAG 92 (258)
T 4gkb_A 83 RLDGLVNNAG 92 (258)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999999875
No 458
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=74.22 E-value=1.8 Score=34.16 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=48.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCC------------C-----cCCCCCeEEEEeeecCCCh
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVP------------S-----LHCDARVQTVSADVINLPS 101 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~------------~-----~~~~~~~~~~~~d~~~~~~ 101 (186)
.++++|--|+ +|+++..+++.+-. .+.+|+.+|.+..... . .....++.+++.|+++...
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAA--DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH--TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH--CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 3567777775 56677777766643 1679999998743211 0 1123468888999887531
Q ss_pred --hhHhhhCCCCCCccEEEeCCC
Q 038391 102 --NQVRALSPKQKGFSVILSDMC 122 (186)
Q Consensus 102 --~~l~~~~~~~~~~D~V~~d~~ 122 (186)
..+......-+.+|+++.+..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 111111111147999999875
No 459
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=73.94 E-value=4.8 Score=31.13 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=46.8
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~V 117 (186)
++++|-.|+ +|+++..+++.+-. .+.+|+.++.++..+........+.++..|+++... ..+......-+.+|++
T Consensus 5 ~k~vlVTGa-s~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 5 DKAVLITGA-AHGIGRATLELFAK--EGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 567776665 56678777776643 167999999876543321111126778888876431 1111111011479999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 82 vn~Ag 86 (245)
T 1uls_A 82 VHYAG 86 (245)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99764
No 460
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=73.94 E-value=2.8 Score=32.98 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=48.8
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-------cCCCCCeEEEEeeecCCChhhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-------LHCDARVQTVSADVINLPSNQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-------~~~~~~~~~~~~d~~~~~~~~l~~~~~~~ 111 (186)
.++++|--|+ +|+++..+++.+-. .+.+|+.+|.++..+.. ......+.++..|+++.. .+..+...-
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~ 83 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVA--EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQ--GCQDVIEKY 83 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHH--HHHHHHHHC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHH--HHHHHHHhc
Confidence 3566776665 56678777776643 26799999988765322 112345777788887643 222221112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 84 g~id~lv~nAg 94 (267)
T 3t4x_A 84 PKVDILINNLG 94 (267)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999864
No 461
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=73.38 E-value=3.7 Score=33.15 Aligned_cols=69 Identities=17% Similarity=0.183 Sum_probs=46.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
++.+||-.| |+|+++..+++.+-.. +.+|++++.++.. .++.++.+|+.+.. .+.... ..+|.|+
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~~--G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~--~~~~~~---~~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRTQ--GRTVRGFDLRPSG-------TGGEEVVGSLEDGQ--ALSDAI---MGVSAVL 82 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHHT--TCCEEEEESSCCS-------SCCSEEESCTTCHH--HHHHHH---TTCSEEE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHhC--CCEEEEEeCCCCC-------CCccEEecCcCCHH--HHHHHH---hCCCEEE
Confidence 356788777 6788999988776431 5799999988754 45788889887643 333332 2789998
Q ss_pred eCCC
Q 038391 119 SDMC 122 (186)
Q Consensus 119 ~d~~ 122 (186)
..++
T Consensus 83 h~A~ 86 (347)
T 4id9_A 83 HLGA 86 (347)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 7543
No 462
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=73.08 E-value=3.1 Score=40.20 Aligned_cols=69 Identities=20% Similarity=0.217 Sum_probs=51.8
Q ss_pred CCCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 38 KPGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 38 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
..+..+||+|+|+=.-...+ +++ ...|+.+|+-|-.-.........+|++.|....... ....+|.|
T Consensus 820 ~~~~~~lDlGTGPE~RiLsL---iP~---~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~-------~~~~~D~v 886 (1289)
T 1ej6_A 820 YDGDVVLDLGTGPEAKILEL---IPA---TSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWI-------TGVRGDIV 886 (1289)
T ss_dssp CTTCCEEEESCCSSCGGGGT---SCT---TSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCG-------GGCCCSEE
T ss_pred cccceEEEccCCCcceeeee---cCC---CCceEEecccCchhhhccccccceeeEcccccccee-------ecCCCcEE
Confidence 56789999999996543333 333 578999999998755555556689999999877654 25689999
Q ss_pred Ee
Q 038391 118 LS 119 (186)
Q Consensus 118 ~~ 119 (186)
.|
T Consensus 887 t~ 888 (1289)
T 1ej6_A 887 TC 888 (1289)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 463
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=73.07 E-value=2.4 Score=33.34 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=50.0
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|--|++.| ++..+++.+-. .+.+|+.+|.++..++. .....++.+++.|+++... ..+......-
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAE--QGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHH--CcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4677887777654 66666666543 16799999988765432 1223568888999887531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+++|+++.+..
T Consensus 87 g~id~lv~nAg 97 (264)
T 3ucx_A 87 GRVDVVINNAF 97 (264)
T ss_dssp SCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47999998763
No 464
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=73.04 E-value=1.1 Score=35.22 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=48.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.+|.++..++. .....++.+++.|+++... ..+......-
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAK--AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35667766655 5577776665532 16799999988765332 1223568888999887531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 88 g~id~lv~nAg 98 (256)
T 3gaf_A 88 GKITVLVNNAG 98 (256)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999864
No 465
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=72.78 E-value=18 Score=27.77 Aligned_cols=76 Identities=14% Similarity=0.153 Sum_probs=46.4
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSV 116 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~ 116 (186)
.++++|-.|+ +|+++..+++.+-. .+.+|+.++.++.. .. ..+.++..|+++... ..+......-+.+|+
T Consensus 6 ~~k~vlVTGa-s~giG~~ia~~l~~--~G~~V~~~~r~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~ 77 (250)
T 2fwm_X 6 SGKNVWVTGA-GKGIGYATALAFVE--AGAKVTGFDQAFTQ-EQ----YPFATEVMDVADAAQVAQVCQRLLAETERLDA 77 (250)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH--TTCEEEEEESCCCS-SC----CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH--CCCEEEEEeCchhh-hc----CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3567777775 46678777776543 16799999988753 11 126777888876431 111111111247999
Q ss_pred EEeCCC
Q 038391 117 ILSDMC 122 (186)
Q Consensus 117 V~~d~~ 122 (186)
++.+..
T Consensus 78 lv~~Ag 83 (250)
T 2fwm_X 78 LVNAAG 83 (250)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999764
No 466
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=72.69 E-value=3.7 Score=32.33 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=48.3
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCcc
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPS--NQVRALSPKQKGFS 115 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D 115 (186)
++++|-.|+ +|+++..+++.+-. .+.+|+.++.++..+.. .....++.+++.|+++... ..+......-+.+|
T Consensus 6 ~k~vlITGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 6 GKTILVTGA-ASGIGRAALDLFAR--EGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 567776665 56678777776643 16799999988755332 1112467888899886531 11111111114789
Q ss_pred EEEeCCC
Q 038391 116 VILSDMC 122 (186)
Q Consensus 116 ~V~~d~~ 122 (186)
+++.+..
T Consensus 83 ~lvnnAg 89 (263)
T 2a4k_A 83 GVAHFAG 89 (263)
T ss_dssp EEEEGGG
T ss_pred EEEECCC
Confidence 9998764
No 467
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=72.36 E-value=5.6 Score=31.54 Aligned_cols=81 Identities=10% Similarity=0.130 Sum_probs=50.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.++.++..++. .....++.+++.|+++... ..+......-
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAE--AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46677777755 6677777776643 16799999998766433 1223468888999887531 1111111111
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.++.
T Consensus 108 g~iD~lvnnAg 118 (276)
T 3r1i_A 108 GGIDIAVCNAG 118 (276)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999875
No 468
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=72.28 E-value=20 Score=27.98 Aligned_cols=74 Identities=14% Similarity=0.231 Sum_probs=46.2
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~V 117 (186)
+++||-.|+ +|+++..+++.+-. .+.+|+.++.++.. ..++.++..|+++... ..+......-+.+|++
T Consensus 8 ~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l 78 (264)
T 2dtx_A 8 DKVVIVTGA-SMGIGRAIAERFVD--EGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL 78 (264)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHH--TTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH--CCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 567777775 46677777776643 16799999987654 2357788888876431 1111111011379999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 79 v~~Ag 83 (264)
T 2dtx_A 79 VNNAG 83 (264)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99764
No 469
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=72.16 E-value=0.87 Score=36.10 Aligned_cols=80 Identities=10% Similarity=0.005 Sum_probs=48.5
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~V 117 (186)
++++|--|+ +|+++..+++.+-.. |.+|+.+|.++..........++.++..|+++... ..+......-+.+|++
T Consensus 27 ~k~vlVTGa-s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 27 SAPILITGA-SQRVGLHCALRLLEH--GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp CCCEEESST-TSHHHHHHHHHHHHT--TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 556776664 566888887776431 67999999887653221111236788889886531 1111111112579999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 104 v~nAg 108 (260)
T 3gem_A 104 VHNAS 108 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99865
No 470
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=72.09 E-value=32 Score=26.99 Aligned_cols=70 Identities=16% Similarity=0.085 Sum_probs=44.0
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
+||-.| |+|+++..+++.+-. .+.+++++-....-. .....++.++.+|+.+.... ... ..+|.|+-.+
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~~---~g~~v~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~---~~~---~~~d~vih~a 71 (313)
T 3ehe_A 3 LIVVTG-GAGFIGSHVVDKLSE---SNEIVVIDNLSSGNE-EFVNEAARLVKADLAADDIK---DYL---KGAEEVWHIA 71 (313)
T ss_dssp CEEEET-TTSHHHHHHHHHHTT---TSCEEEECCCSSCCG-GGSCTTEEEECCCTTTSCCH---HHH---TTCSEEEECC
T ss_pred EEEEEC-CCchHHHHHHHHHHh---CCCEEEEEcCCCCCh-hhcCCCcEEEECcCChHHHH---HHh---cCCCEEEECC
Confidence 456555 689999999998865 347777765433211 12235688888998763222 221 3789988755
Q ss_pred C
Q 038391 122 C 122 (186)
Q Consensus 122 ~ 122 (186)
.
T Consensus 72 ~ 72 (313)
T 3ehe_A 72 A 72 (313)
T ss_dssp C
T ss_pred C
Confidence 4
No 471
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=71.64 E-value=2.1 Score=34.27 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=51.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh-h-hHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS-N-QVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~-~-~l~~~~~~~ 111 (186)
+|+.+|-=|++.| ++..+++.+-. .|.+|+.+|.+++.++. .....++.+++.|+++... . .+......-
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~--~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFAL--NDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4667777775554 67777766543 27899999999876543 2234578888999987541 1 111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
++.|+++.|+.
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57999999874
No 472
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.56 E-value=5.2 Score=30.62 Aligned_cols=73 Identities=14% Similarity=0.071 Sum_probs=44.0
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCC------CCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSP------KQKG 113 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~------~~~~ 113 (186)
++++|-.|+ +|+++..+++.+-.. +.+|+.++.++..... ...++..|+++.. .+..+.. ..+.
T Consensus 3 ~k~vlITGa-s~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~--~~~~~~~~~~~~~~~g~ 72 (236)
T 1ooe_A 3 SGKVIVYGG-KGALGSAILEFFKKN--GYTVLNIDLSANDQAD-----SNILVDGNKNWTE--QEQSILEQTASSLQGSQ 72 (236)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHHT--TEEEEEEESSCCTTSS-----EEEECCTTSCHHH--HHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHC--CCEEEEEecCcccccc-----ccEEEeCCCCCHH--HHHHHHHHHHHHhCCCC
Confidence 446666664 566888888776431 6799999988766432 2445566665432 1111110 0147
Q ss_pred ccEEEeCCC
Q 038391 114 FSVILSDMC 122 (186)
Q Consensus 114 ~D~V~~d~~ 122 (186)
+|+++.+..
T Consensus 73 id~lv~~Ag 81 (236)
T 1ooe_A 73 VDGVFCVAG 81 (236)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 999999764
No 473
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=71.48 E-value=1.5 Score=36.02 Aligned_cols=27 Identities=33% Similarity=0.439 Sum_probs=22.0
Q ss_pred HHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 138 ELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+.++.++..+.. +|+|||+|++-.||+
T Consensus 210 ~~L~~~L~~a~~------------------~L~~gGrl~visfHS 236 (285)
T 1wg8_A 210 NALKEFLEQAAE------------------VLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHHHH------------------HEEEEEEEEEEECSH
T ss_pred HHHHHHHHHHHH------------------HhcCCCEEEEEecCc
Confidence 345567777776 999999999999986
No 474
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=71.44 E-value=4.9 Score=31.45 Aligned_cols=81 Identities=16% Similarity=0.116 Sum_probs=47.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEE-eCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGI-DVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPK 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gv-Dis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~ 110 (186)
+++++|--|+ +|+++..+++.+-. .+.+|+.+ +.++..+.. .....++.+++.|+++... ..+......
T Consensus 3 ~~k~vlVTGa-s~gIG~aia~~l~~--~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGS-SRGVGKAAAIRLAE--NGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecC-CchHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4566776664 56688888777643 16788886 655543221 1223568888999887531 111111111
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
-+++|+++.+..
T Consensus 80 ~g~id~lv~nAg 91 (258)
T 3oid_A 80 FGRLDVFVNNAA 91 (258)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247899999864
No 475
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=71.25 E-value=6 Score=30.12 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=48.8
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc-CCCCCeEEEEeeecCCChhhHhhhCCCCCCccEE
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL-HCDARVQTVSADVINLPSNQVRALSPKQKGFSVI 117 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~-~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V 117 (186)
++++||-.|+ +|+++..+++.+-. .+.+|++++.++..+... ....+++++..|+++.. .+..+...-+++|+|
T Consensus 6 ~~~~vlVTGa-sggiG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~id~v 80 (244)
T 1cyd_A 6 SGLRALVTGA-GKGIGRDTVKALHA--SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD--ATEKALGGIGPVDLL 80 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH--HHHHHHTTCCCCSEE
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHH--HHHHHHHHcCCCCEE
Confidence 3567776665 67788888877643 167999999876543221 11134667788887642 333333223478999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 81 i~~Ag 85 (244)
T 1cyd_A 81 VNNAA 85 (244)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 98764
No 476
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=71.08 E-value=4.7 Score=30.31 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=49.7
Q ss_pred CEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeC
Q 038391 41 SSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSD 120 (186)
Q Consensus 41 ~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d 120 (186)
.+||-.| |+|+++..+++.+-.. +.+|++++-++...... ..++.++.+|+.+.. .+.... ..+|.|+..
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~--~~~~~~---~~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLD--EVCEVC---KGADAVISA 74 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCC--CTTEEEECCCTTCHH--HHHHHH---TTCSEEEEC
T ss_pred CEEEEEc-CCchHHHHHHHHHHHC--CCEEEEEEcCcccchhc--cCceEEEEecCCCHH--HHHHHh---cCCCEEEEe
Confidence 4677665 5688898888877542 57999999987765432 257889999987643 333333 268999886
Q ss_pred CC
Q 038391 121 MC 122 (186)
Q Consensus 121 ~~ 122 (186)
..
T Consensus 75 a~ 76 (227)
T 3dhn_A 75 FN 76 (227)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 477
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=70.80 E-value=18 Score=29.75 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=49.8
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------------cCCCCCeEEEEeeecCCCh--hhHh
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------------LHCDARVQTVSADVINLPS--NQVR 105 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------------~~~~~~~~~~~~d~~~~~~--~~l~ 105 (186)
++++|-.|++ |+++..+++.+-.. +.+|+.++.++...+. .....++.+++.|+++... ..+.
T Consensus 45 gk~vlVTGas-~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 45 GCTVFITGAS-RGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCC-hHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 5667766665 56777777776442 6799999988875432 1123467888899887531 1111
Q ss_pred hhCCCCCCccEEEeCCC
Q 038391 106 ALSPKQKGFSVILSDMC 122 (186)
Q Consensus 106 ~~~~~~~~~D~V~~d~~ 122 (186)
.....-+.+|+++.+..
T Consensus 122 ~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNAS 138 (346)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 11111147999999864
No 478
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=70.28 E-value=4.9 Score=31.64 Aligned_cols=80 Identities=18% Similarity=0.128 Sum_probs=47.7
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
++.+|-.|+ +|+++..+++.+-. .+.+|+.++.++..+... ....++.++..|+++... ..+......-
T Consensus 21 ~k~~lVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 21 GRVALVTGG-SRGLGFGIAQGLAE--AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 567777775 56788887776643 167999999876543210 113457788888876431 1111111011
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 98 g~iD~lvnnAg 108 (267)
T 1vl8_A 98 GKLDTVVNAAG 108 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999998764
No 479
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=70.26 E-value=4.1 Score=30.73 Aligned_cols=73 Identities=15% Similarity=0.108 Sum_probs=48.5
Q ss_pred EEEEEcccCChHHHHHHHHhC-CCCCCCeEEEEeCCCC-CCCCc-CCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEE
Q 038391 42 SVLDLGCAPGAWLQVACQSLG-PLDNGGSVVGIDVKKV-KVPSL-HCDARVQTVSADVINLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~-~~~~~~~v~gvDis~~-~i~~~-~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~ 118 (186)
+||-.| |+|+++..+++.+- . .+.+|++++-++. .+... ....++.++++|+.+.. .+.... ..+|+|+
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~--~~~~~~---~~~d~vv 78 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTY--TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPG--XLEQAV---TNAEVVF 78 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHH--CCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHH--HHHHHH---TTCSEEE
T ss_pred EEEEEe-CCcHHHHHHHHHHHhc--CCceEEEEecCccccchhhccCCCceEEEECCCCCHH--HHHHHH---cCCCEEE
Confidence 477666 56778888887664 2 2679999998877 54431 13457889999987643 333332 3689999
Q ss_pred eCCC
Q 038391 119 SDMC 122 (186)
Q Consensus 119 ~d~~ 122 (186)
.+..
T Consensus 79 ~~ag 82 (221)
T 3r6d_A 79 VGAM 82 (221)
T ss_dssp ESCC
T ss_pred EcCC
Confidence 8653
No 480
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=69.99 E-value=1.7 Score=36.73 Aligned_cols=27 Identities=41% Similarity=0.491 Sum_probs=22.3
Q ss_pred HHHHHHHHHHcCCcccCCCCCCCCCCCCCcccccCcEEEEEEccC
Q 038391 138 ELGMRAVDLALGPAALASPVNNSDSSTDSGVLKPGGHLVIKLLES 182 (186)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~ 182 (186)
+.++.++..+.. +|+|||+|++-.||+
T Consensus 251 ~~L~~~L~~a~~------------------~L~~gGRl~VISFHS 277 (347)
T 3tka_A 251 EEIEQALKSSLN------------------VLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHHHH------------------HEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHH------------------HhCCCCEEEEEecCc
Confidence 445677777777 999999999999996
No 481
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=69.97 E-value=6.5 Score=30.85 Aligned_cols=81 Identities=17% Similarity=0.202 Sum_probs=49.6
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.+++||-.|+ +|+++..+++.+-.. +.+|++++.++..+.. .....++.++..|+++... ..+......-
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 3567777774 577888888776431 6799999987654322 1113468888999876431 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+|+.+..
T Consensus 107 g~iD~li~~Ag 117 (272)
T 1yb1_A 107 GDVSILVNNAG 117 (272)
T ss_dssp CCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47999998764
No 482
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=69.50 E-value=3.4 Score=32.16 Aligned_cols=81 Identities=19% Similarity=0.131 Sum_probs=47.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeC-CCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDV-KKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPK 110 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDi-s~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~ 110 (186)
++++||-.| |+|+++..+++.+-.. +.+|+.++- ++..+.. .....++.++..|+++... ..+......
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 356777666 5678888888776431 578999987 4433211 1123467888899876431 111111101
Q ss_pred CCCccEEEeCCC
Q 038391 111 QKGFSVILSDMC 122 (186)
Q Consensus 111 ~~~~D~V~~d~~ 122 (186)
-+.+|+++.+..
T Consensus 97 ~~~~d~vi~~Ag 108 (274)
T 1ja9_A 97 FGGLDFVMSNSG 108 (274)
T ss_dssp HSCEEEEECCCC
T ss_pred cCCCCEEEECCC
Confidence 137999998764
No 483
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=69.44 E-value=4.9 Score=31.88 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=49.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|--|++ |+++..+++.+-. .|.+|+.++.++..+.. .....++.++..|+++... ..+......-
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAA--RGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46678877755 5677777766543 16799999988765432 1223568888999886531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.++.
T Consensus 100 g~id~lv~nAg 110 (279)
T 3sju_A 100 GPIGILVNSAG 110 (279)
T ss_dssp CSCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47899999865
No 484
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=69.33 E-value=7.2 Score=31.74 Aligned_cols=75 Identities=23% Similarity=0.212 Sum_probs=50.1
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeec-CCChhhHhhhCCCCCCccEEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVI-NLPSNQVRALSPKQKGFSVIL 118 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~-~~~~~~l~~~~~~~~~~D~V~ 118 (186)
..+||-.| |+|+++..+++.+-.. ++.+|++++.++..+.......+++++.+|+. +.. .+.... ..+|.|+
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~--~~~~~~---~~~d~Vi 96 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKE--WVEYHV---KKCDVIL 96 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHH--HHHHHH---HHCSEEE
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHH--HHHHHh---ccCCEEE
Confidence 45788666 6788998888776321 14699999998876554333467999999987 432 222222 2689998
Q ss_pred eCC
Q 038391 119 SDM 121 (186)
Q Consensus 119 ~d~ 121 (186)
..+
T Consensus 97 h~A 99 (372)
T 3slg_A 97 PLV 99 (372)
T ss_dssp ECB
T ss_pred EcC
Confidence 643
No 485
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=68.94 E-value=9.6 Score=29.57 Aligned_cols=81 Identities=19% Similarity=0.166 Sum_probs=48.6
Q ss_pred CCCEEEEEcc-cCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------cCCCCCeEEEEeeecCCCh--hhHhhhCC
Q 038391 39 PGSSVLDLGC-APGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------LHCDARVQTVSADVINLPS--NQVRALSP 109 (186)
Q Consensus 39 ~~~~vLDlGc-G~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------~~~~~~~~~~~~d~~~~~~--~~l~~~~~ 109 (186)
.++++|-.|+ |.| ++..+++.+-. .+.+|+.++.++..+.. .....++.+++.|+++... ..+.....
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALL--EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHH--CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 3567787776 444 56666655432 16799999988765322 1223578899999887531 11111111
Q ss_pred CCCCccEEEeCCC
Q 038391 110 KQKGFSVILSDMC 122 (186)
Q Consensus 110 ~~~~~D~V~~d~~ 122 (186)
..+++|+++.+..
T Consensus 98 ~~g~id~li~~Ag 110 (266)
T 3o38_A 98 KAGRLDVLVNNAG 110 (266)
T ss_dssp HHSCCCEEEECCC
T ss_pred HhCCCcEEEECCC
Confidence 1247899999865
No 486
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=68.81 E-value=4.4 Score=32.59 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=50.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.+++||-.|++ |+++..+++.+-. .+.+|+.++.++..+.. .....++.++..|+++... ..+.......
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFAR--RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 46678877766 5577777766543 16799999988766432 1123468888999887531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.+..
T Consensus 107 g~id~lvnnAg 117 (301)
T 3tjr_A 107 GGVDVVFSNAG 117 (301)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999865
No 487
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=68.81 E-value=2.5 Score=34.65 Aligned_cols=15 Identities=40% Similarity=0.837 Sum_probs=14.3
Q ss_pred ccccCcEEEEEEccC
Q 038391 168 VLKPGGHLVIKLLES 182 (186)
Q Consensus 168 ~LkpgG~lvi~~~~~ 182 (186)
+|+|||+|+|-.||+
T Consensus 234 ~l~~ggr~~visfhs 248 (301)
T 1m6y_A 234 LLNPGGRIVVISFHS 248 (301)
T ss_dssp GEEEEEEEEEEESSH
T ss_pred hhCCCCEEEEEecCc
Confidence 999999999999986
No 488
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=68.49 E-value=2.9 Score=32.39 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=49.9
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc--CCCCCeEEEEeeecCCCh--hhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL--HCDARVQTVSADVINLPS--NQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~--~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~ 114 (186)
++++||-.|+ +|+++..+++.+-. .+.+|+.++.++..+... ....++.++..|+++... ..+......-+.+
T Consensus 11 ~~k~vlVTGa-sggiG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (265)
T 2o23_A 11 KGLVAVITGG-ASGLGLATAERLVG--QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV 87 (265)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH--CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 3567777776 57788888877643 167999999887654321 113468888899876431 1111111011379
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.+..
T Consensus 88 d~li~~Ag 95 (265)
T 2o23_A 88 DVAVNCAG 95 (265)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 99998764
No 489
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=68.45 E-value=6.4 Score=30.56 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=48.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCc------CCCCCeEEEEeeecCCChhhHhh----hC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSL------HCDARVQTVSADVINLPSNQVRA----LS 108 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~------~~~~~~~~~~~d~~~~~~~~l~~----~~ 108 (186)
.++.+|--|+ +|+++..+++.+-. .+.+|+.+|.++..+... ....++.++..|+.......+.. ..
T Consensus 11 ~~k~vlVTGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 11 NDRIILVTGA-SDGIGREAAMTYAR--YGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 3567777775 46677777776643 167999999887654321 11225778888883222222211 11
Q ss_pred CCCCCccEEEeCCC
Q 038391 109 PKQKGFSVILSDMC 122 (186)
Q Consensus 109 ~~~~~~D~V~~d~~ 122 (186)
...+.+|+++.+..
T Consensus 88 ~~~g~id~lv~nAg 101 (252)
T 3f1l_A 88 VNYPRLDGVLHNAG 101 (252)
T ss_dssp HHCSCCSEEEECCC
T ss_pred HhCCCCCEEEECCc
Confidence 11257999999865
No 490
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=68.36 E-value=6.3 Score=30.23 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=46.7
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
..+|+=+|+ |..+..+++.+... +. |+++|.++..+.... ..+.++.+|.++.. .+.... -..+|.|++
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~--~l~~a~--i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGS--EV-FVLAEDENVRKKVLR--SGANFVHGDPTRVS--DLEKAN--VRGARAVIV 77 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH--TTCEEEESCTTCHH--HHHHTT--CTTCSEEEE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh--cCCeEEEcCCCCHH--HHHhcC--cchhcEEEE
Confidence 457887776 78899999887642 45 999999887654433 45788899886542 232221 247898887
No 491
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=68.29 E-value=1.6 Score=33.89 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=50.2
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC-----cCCCCCeEEEEeeecCCCh--hhHhhhCCCC
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS-----LHCDARVQTVSADVINLPS--NQVRALSPKQ 111 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~-----~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~ 111 (186)
.++++|-.|+ +|+++..+++++-.. +.+|+.+|.++..+.. .....++.++..|+++... ..+.......
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3667777775 566777777776431 6799999988765432 1223567888899887531 1111111112
Q ss_pred CCccEEEeCCC
Q 038391 112 KGFSVILSDMC 122 (186)
Q Consensus 112 ~~~D~V~~d~~ 122 (186)
+.+|+++.++.
T Consensus 85 g~id~li~~Ag 95 (253)
T 3qiv_A 85 GGIDYLVNNAA 95 (253)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999764
No 492
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=68.12 E-value=23 Score=28.29 Aligned_cols=70 Identities=14% Similarity=-0.005 Sum_probs=45.8
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC----cCCCCCeEEEEeeecCCChhhHhhhCCCCCCcc
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS----LHCDARVQTVSADVINLPSNQVRALSPKQKGFS 115 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~----~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D 115 (186)
+.+||-.| |+|+++..+++.+-.. +.+|++++-.+..... .....++.++.+|+.+.. -..+|
T Consensus 27 ~~~vlVtG-atG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------~~~~d 93 (343)
T 2b69_A 27 RKRILITG-GAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL----------YIEVD 93 (343)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC----------CCCCS
T ss_pred CCEEEEEc-CccHHHHHHHHHHHHC--CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh----------hcCCC
Confidence 56788776 4788999888776431 5789999876432111 111346888888876542 13689
Q ss_pred EEEeCCC
Q 038391 116 VILSDMC 122 (186)
Q Consensus 116 ~V~~d~~ 122 (186)
.|+..+.
T Consensus 94 ~vih~A~ 100 (343)
T 2b69_A 94 QIYHLAS 100 (343)
T ss_dssp EEEECCS
T ss_pred EEEECcc
Confidence 9987543
No 493
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=67.90 E-value=41 Score=26.40 Aligned_cols=81 Identities=10% Similarity=0.124 Sum_probs=50.8
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC------------cCCCCCeEEEEeeecCCCh--hhH
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS------------LHCDARVQTVSADVINLPS--NQV 104 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~------------~~~~~~~~~~~~d~~~~~~--~~l 104 (186)
+++.+|--|++ |+++..+++.+-.. +.+|+.++.++...+. .....++.+++.|+++... ..+
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 35677777765 55788888776542 6799999998875332 1123468888899887531 111
Q ss_pred hhhCCCCCCccEEEeCCC
Q 038391 105 RALSPKQKGFSVILSDMC 122 (186)
Q Consensus 105 ~~~~~~~~~~D~V~~d~~ 122 (186)
......-+.+|+++.+..
T Consensus 85 ~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp HHHHHHHSCCSEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 111111247999999864
No 494
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=67.69 E-value=8.5 Score=30.04 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=46.8
Q ss_pred CCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCccEE
Q 038391 40 GSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPS--NQVRALSPKQKGFSVI 117 (186)
Q Consensus 40 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~D~V 117 (186)
++++|-.|+ +|+++..+++.+-. .+.+|+.++.++..++. +.+++.|+++... ..+......-+.+|++
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l 91 (253)
T 2nm0_A 21 SRSVLVTGG-NRGIGLAIARAFAD--AGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVL 91 (253)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH--CCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 567777775 56677777776543 16799999987765442 6778888876431 1111111112478999
Q ss_pred EeCCC
Q 038391 118 LSDMC 122 (186)
Q Consensus 118 ~~d~~ 122 (186)
+.+..
T Consensus 92 v~nAg 96 (253)
T 2nm0_A 92 IANAG 96 (253)
T ss_dssp EEECS
T ss_pred EECCC
Confidence 98764
No 495
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=67.55 E-value=3.3 Score=32.46 Aligned_cols=81 Identities=16% Similarity=0.128 Sum_probs=47.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPS--NQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~ 114 (186)
.++++|-.|+ +|+++..+++.+-. .+.+|+.++.++..+.. .....++.+++.|+++... ..+......-+.+
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 82 (260)
T 1nff_A 6 TGKVALVSGG-ARGMGASHVRAMVA--EGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL 82 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3567777775 56677777776543 16799999987654322 1112247788888876431 1111111011379
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.+..
T Consensus 83 D~lv~~Ag 90 (260)
T 1nff_A 83 HVLVNNAG 90 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999764
No 496
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=67.38 E-value=7.2 Score=30.90 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=49.5
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPS--NQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~ 114 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.+|.++..+.. .....++.+++.|+++... ..+......-+++
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAK--NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 35677777755 6677777776643 16799999988755432 1123467888899887531 1111111111479
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.++.
T Consensus 103 D~lv~nAg 110 (277)
T 4dqx_A 103 DVLVNNAG 110 (277)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999865
No 497
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=67.17 E-value=23 Score=27.77 Aligned_cols=70 Identities=17% Similarity=0.117 Sum_probs=45.2
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEeCC
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILSDM 121 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~d~ 121 (186)
+||-.| |+|+++..+++.+-.. +.+|++++.++..... ....++.++.+|+.+.. +.... . . |+|+..+
T Consensus 2 ~vlVtG-atG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~---~~~~~--~-~-d~vih~A 70 (312)
T 3ko8_A 2 RIVVTG-GAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRRE-FVNPSAELHVRDLKDYS---WGAGI--K-G-DVVFHFA 70 (312)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHT--TCEEEEECCCSSCCGG-GSCTTSEEECCCTTSTT---TTTTC--C-C-SEEEECC
T ss_pred EEEEEC-CCChHHHHHHHHHHhC--CCEEEEEeCCCCCchh-hcCCCceEEECccccHH---HHhhc--C-C-CEEEECC
Confidence 455555 5688998888876431 5799999987655332 12456888889987754 22222 1 2 9998765
Q ss_pred C
Q 038391 122 C 122 (186)
Q Consensus 122 ~ 122 (186)
.
T Consensus 71 ~ 71 (312)
T 3ko8_A 71 A 71 (312)
T ss_dssp S
T ss_pred C
Confidence 4
No 498
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=67.14 E-value=6.5 Score=30.94 Aligned_cols=81 Identities=12% Similarity=0.095 Sum_probs=49.9
Q ss_pred CCCEEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCC--cCCCCCeEEEEeeecCCCh--hhHhhhCCCCCCc
Q 038391 39 PGSSVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPS--LHCDARVQTVSADVINLPS--NQVRALSPKQKGF 114 (186)
Q Consensus 39 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~--~~~~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~ 114 (186)
.++++|--|++ |+++..+++.+-. .+.+|+.+|.++..+.. .....++.+++.|+++... ..+......-+.+
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 10 ENKVAIITGAC-GGIGLETSRVLAR--AGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 35677777755 5677777766543 16799999998876543 1123467888889876531 1111111111479
Q ss_pred cEEEeCCC
Q 038391 115 SVILSDMC 122 (186)
Q Consensus 115 D~V~~d~~ 122 (186)
|+++.+..
T Consensus 87 d~lv~nAg 94 (271)
T 3tzq_B 87 DIVDNNAA 94 (271)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999865
No 499
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=66.91 E-value=12 Score=30.32 Aligned_cols=36 Identities=6% Similarity=-0.123 Sum_probs=25.3
Q ss_pred CCEEEEEcccC-ChHHHHHHHHhCCCCCCCeEEEEeCCC
Q 038391 40 GSSVLDLGCAP-GAWLQVACQSLGPLDNGGSVVGIDVKK 77 (186)
Q Consensus 40 ~~~vLDlGcG~-G~~~~~l~~~~~~~~~~~~v~gvDis~ 77 (186)
++.+|--|+|. ++++..+++.+-. .|.+|+..+.++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~--~G~~Vv~~~~~~ 38 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSK--RNVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHH--TTCEEEEEECHH
T ss_pred CcEEEEECCCCCCchHHHHHHHHHH--CCCEEEEEecCc
Confidence 46778888874 6788888877643 267898776443
No 500
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=66.78 E-value=1.9 Score=37.49 Aligned_cols=70 Identities=7% Similarity=0.098 Sum_probs=47.7
Q ss_pred EEEEEcccCChHHHHHHHHhCCCCCCCeEEEEeCCCCCCCCcCCCCCeEEEEeeecCCChhhHhhhCCCCCCccEEEe
Q 038391 42 SVLDLGCAPGAWLQVACQSLGPLDNGGSVVGIDVKKVKVPSLHCDARVQTVSADVINLPSNQVRALSPKQKGFSVILS 119 (186)
Q Consensus 42 ~vLDlGcG~G~~~~~l~~~~~~~~~~~~v~gvDis~~~i~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~D~V~~ 119 (186)
+|+= ||.|..+..+++.+.. .+..|+.||.++..+........+..+++|.++.. .+.+-. -...|++++
T Consensus 5 ~iiI--~G~G~vG~~la~~L~~--~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~--~L~~Ag--i~~ad~~ia 74 (461)
T 4g65_A 5 KIII--LGAGQVGGTLAENLVG--ENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPD--VLHEAG--AQDADMLVA 74 (461)
T ss_dssp EEEE--ECCSHHHHHHHHHTCS--TTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHH--HHHHHT--TTTCSEEEE
T ss_pred EEEE--ECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHH--HHHhcC--CCcCCEEEE
Confidence 4444 5557888899988754 25689999999988765332235778899988654 333331 357898887
Done!