Query 038392
Match_columns 397
No_of_seqs 226 out of 2279
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 10:32:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038392.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038392hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00954 S_locus_glycop: S-loc 100.0 6.9E-28 1.5E-32 197.6 12.0 109 161-270 1-110 (110)
2 PF01453 B_lectin: D-mannose b 99.9 5.4E-25 1.2E-29 181.2 1.1 100 31-135 8-114 (114)
3 cd00028 B_lectin Bulb-type man 99.7 1.4E-17 3.1E-22 137.7 9.5 90 8-103 14-116 (116)
4 smart00108 B_lectin Bulb-type 99.7 3.5E-16 7.7E-21 129.0 9.0 88 8-102 14-114 (114)
5 KOG1187 Serine/threonine prote 99.1 2.4E-10 5.2E-15 112.7 8.0 69 327-395 61-129 (361)
6 smart00108 B_lectin Bulb-type 98.7 4.5E-08 9.8E-13 80.5 8.8 85 43-164 26-112 (114)
7 cd00028 B_lectin Bulb-type man 98.7 1E-07 2.3E-12 78.6 9.1 86 43-165 26-114 (116)
8 PF01453 B_lectin: D-mannose b 97.4 0.0003 6.6E-09 57.7 6.0 72 57-164 3-79 (114)
9 KOG0193 Serine/threonine prote 97.4 8.9E-05 1.9E-09 75.5 3.0 51 344-396 395-447 (678)
10 cd06624 STKc_ASK Catalytic dom 97.1 0.00076 1.6E-08 63.0 5.3 61 335-395 2-63 (268)
11 KOG0595 Serine/threonine-prote 96.9 0.0011 2.4E-08 64.8 4.5 55 341-395 10-67 (429)
12 PLN03224 probable serine/threo 96.8 0.0016 3.4E-08 67.2 5.1 48 339-386 143-207 (507)
13 KOG4236 Serine/threonine prote 96.7 0.0018 4E-08 65.3 4.6 54 341-395 565-621 (888)
14 cd05067 PTKc_Lck_Blk Catalytic 96.6 0.0035 7.7E-08 58.2 5.6 53 342-395 7-59 (260)
15 PRK09188 serine/threonine prot 96.4 0.0051 1.1E-07 60.9 5.7 57 339-395 16-79 (365)
16 cd05068 PTKc_Frk_like Catalyti 96.3 0.006 1.3E-07 56.7 5.5 54 341-395 6-59 (261)
17 KOG0192 Tyrosine kinase specif 96.2 0.0063 1.4E-07 60.2 4.9 49 347-395 47-97 (362)
18 cd05034 PTKc_Src_like Catalyti 96.2 0.0095 2.1E-07 55.2 5.8 54 341-395 6-59 (261)
19 PTZ00284 protein kinase; Provi 96.2 0.0044 9.6E-08 63.4 3.8 60 335-395 123-183 (467)
20 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 96.1 0.0088 1.9E-07 56.3 5.5 54 342-395 5-63 (284)
21 KOG0194 Protein tyrosine kinas 96.1 0.0062 1.3E-07 61.9 4.5 49 347-395 163-219 (474)
22 KOG1094 Discoidin domain recep 96.1 0.007 1.5E-07 61.9 4.8 49 347-395 544-593 (807)
23 PHA02988 hypothetical protein; 96.0 0.016 3.5E-07 54.9 6.9 62 328-395 12-76 (283)
24 cd05072 PTKc_Lyn Catalytic dom 96.0 0.009 2E-07 55.4 5.0 53 342-395 7-59 (261)
25 cd05148 PTKc_Srm_Brk Catalytic 96.0 0.0049 1.1E-07 57.1 3.0 57 339-395 4-60 (261)
26 KOG0600 Cdc2-related protein k 96.0 0.0047 1E-07 62.0 2.8 53 343-395 119-174 (560)
27 cd05070 PTKc_Fyn_Yrk Catalytic 96.0 0.013 2.7E-07 54.5 5.6 52 343-395 8-59 (260)
28 cd06637 STKc_TNIK Catalytic do 95.9 0.0075 1.6E-07 56.3 4.1 56 338-394 3-59 (272)
29 KOG1026 Nerve growth factor re 95.9 0.002 4.3E-08 68.2 0.1 50 346-395 491-547 (774)
30 cd05033 PTKc_EphR Catalytic do 95.9 0.013 2.8E-07 54.6 5.5 55 341-395 4-63 (266)
31 cd05071 PTKc_Src Catalytic dom 95.8 0.014 3.1E-07 54.3 5.2 52 343-395 8-59 (262)
32 cd05096 PTKc_DDR1 Catalytic do 95.8 0.016 3.5E-07 55.2 5.5 53 343-395 7-77 (304)
33 cd05049 PTKc_Trk Catalytic dom 95.7 0.01 2.2E-07 55.6 4.0 53 343-395 7-66 (280)
34 cd06638 STKc_myosinIIIA Cataly 95.7 0.011 2.3E-07 55.8 4.1 63 331-394 8-71 (286)
35 KOG1035 eIF-2alpha kinase GCN2 95.7 0.0042 9.1E-08 68.3 1.3 57 339-395 477-535 (1351)
36 cd05064 PTKc_EphR_A10 Catalyti 95.7 0.016 3.4E-07 54.2 4.9 54 342-395 6-64 (266)
37 cd05073 PTKc_Hck Catalytic dom 95.7 0.017 3.6E-07 53.7 5.1 53 342-395 7-59 (260)
38 cd05108 PTKc_EGFR Catalytic do 95.7 0.017 3.6E-07 55.6 5.2 55 341-395 7-67 (316)
39 cd05039 PTKc_Csk_like Catalyti 95.6 0.022 4.7E-07 52.6 5.8 53 341-395 6-58 (256)
40 cd06646 STKc_MAP4K5 Catalytic 95.6 0.024 5.3E-07 52.7 6.0 54 342-395 10-64 (267)
41 KOG3653 Transforming growth fa 95.6 0.008 1.7E-07 60.0 2.6 42 347-392 216-257 (534)
42 KOG0658 Glycogen synthase kina 95.5 0.017 3.7E-07 55.9 4.4 47 344-394 27-74 (364)
43 KOG1989 ARK protein kinase fam 95.5 0.017 3.7E-07 61.4 4.9 49 347-395 43-92 (738)
44 KOG0197 Tyrosine kinases [Sign 95.5 0.013 2.8E-07 59.0 3.8 48 347-395 212-259 (468)
45 KOG0580 Serine/threonine prote 95.4 0.0079 1.7E-07 55.2 1.9 57 339-395 20-80 (281)
46 cd05090 PTKc_Ror1 Catalytic do 95.4 0.021 4.5E-07 53.7 4.8 53 343-395 7-65 (283)
47 cd07879 STKc_p38delta_MAPK13 C 95.4 0.032 6.9E-07 54.4 6.2 55 341-395 15-72 (342)
48 KOG0591 NIMA (never in mitosis 95.3 0.005 1.1E-07 57.8 0.1 49 347-395 25-76 (375)
49 cd05063 PTKc_EphR_A2 Catalytic 95.3 0.028 6.2E-07 52.2 5.2 55 341-395 5-64 (268)
50 cd05103 PTKc_VEGFR2 Catalytic 95.2 0.023 4.9E-07 55.5 4.5 53 342-394 8-67 (343)
51 cd05102 PTKc_VEGFR3 Catalytic 95.2 0.017 3.7E-07 56.1 3.6 54 341-394 7-67 (338)
52 cd07871 STKc_PCTAIRE3 Catalyti 95.2 0.037 7.9E-07 52.4 5.8 54 342-395 6-61 (288)
53 cd05043 PTK_Ryk Pseudokinase d 95.1 0.028 6.1E-07 52.7 4.8 55 341-395 6-66 (280)
54 PLN00034 mitogen-activated pro 95.1 0.027 5.8E-07 55.2 4.8 49 347-395 80-130 (353)
55 KOG1025 Epidermal growth facto 95.1 0.033 7.1E-07 59.4 5.5 50 346-395 701-756 (1177)
56 cd05069 PTKc_Yes Catalytic dom 95.1 0.037 7.9E-07 51.4 5.4 52 343-395 8-59 (260)
57 cd07877 STKc_p38alpha_MAPK14 C 95.1 0.036 7.9E-07 54.1 5.5 63 333-395 9-74 (345)
58 cd07864 STKc_CDK12 Catalytic d 95.1 0.043 9.3E-07 52.0 5.9 58 338-395 4-64 (302)
59 cd07872 STKc_PCTAIRE2 Catalyti 95.1 0.036 7.9E-07 53.0 5.4 54 342-395 7-62 (309)
60 PTZ00263 protein kinase A cata 95.0 0.03 6.4E-07 54.4 4.8 54 342-395 19-76 (329)
61 cd05038 PTKc_Jak_rpt2 Catalyti 95.0 0.042 9.2E-07 51.3 5.6 50 346-395 9-64 (284)
62 cd05104 PTKc_Kit Catalytic dom 95.0 0.029 6.2E-07 55.7 4.6 53 342-394 36-95 (375)
63 cd06639 STKc_myosinIIIB Cataly 95.0 0.024 5.3E-07 53.5 3.9 63 331-394 12-75 (291)
64 cd05093 PTKc_TrkB Catalytic do 95.0 0.029 6.4E-07 53.0 4.4 54 342-395 6-65 (288)
65 cd07878 STKc_p38beta_MAPK11 Ca 95.0 0.048 1E-06 53.1 6.0 56 340-395 14-72 (343)
66 cd05105 PTKc_PDGFR_alpha Catal 95.0 0.04 8.6E-07 55.3 5.5 54 342-395 38-98 (400)
67 cd05046 PTK_CCK4 Pseudokinase 95.0 0.036 7.8E-07 51.8 5.0 55 341-395 5-66 (275)
68 cd06636 STKc_MAP4K4_6 Catalyti 95.0 0.039 8.5E-07 51.8 5.2 63 331-394 6-69 (282)
69 KOG1095 Protein tyrosine kinas 94.9 0.03 6.5E-07 61.6 4.8 49 347-395 698-753 (1025)
70 cd07854 STKc_MAPK4_6 Catalytic 94.9 0.046 9.9E-07 53.3 5.7 55 341-395 5-60 (342)
71 cd05050 PTKc_Musk Catalytic do 94.9 0.035 7.6E-07 52.4 4.7 56 340-395 4-66 (288)
72 cd05052 PTKc_Abl Catalytic dom 94.9 0.035 7.7E-07 51.6 4.6 52 343-395 8-60 (263)
73 cd07869 STKc_PFTAIRE1 Catalyti 94.8 0.047 1E-06 52.1 5.5 55 341-395 5-61 (303)
74 KOG0575 Polo-like serine/threo 94.8 0.048 1E-06 56.1 5.5 53 343-395 20-76 (592)
75 cd05107 PTKc_PDGFR_beta Cataly 94.8 0.038 8.2E-07 55.5 4.8 51 345-395 41-98 (401)
76 cd06611 STKc_SLK_like Catalyti 94.8 0.022 4.8E-07 53.4 3.0 55 341-395 5-60 (280)
77 cd07856 STKc_Sty1_Hog1 Catalyt 94.8 0.037 7.9E-07 53.7 4.5 61 335-395 4-67 (328)
78 cd07870 STKc_PFTAIRE2 Catalyti 94.7 0.039 8.4E-07 52.1 4.6 57 339-395 3-61 (291)
79 cd06656 STKc_PAK3 Catalytic do 94.7 0.059 1.3E-06 51.3 5.8 55 341-395 19-74 (297)
80 cd05065 PTKc_EphR_B Catalytic 94.7 0.038 8.3E-07 51.4 4.4 53 343-395 6-63 (269)
81 cd07849 STKc_ERK1_2_like Catal 94.6 0.055 1.2E-06 52.5 5.5 56 340-395 4-61 (336)
82 cd06649 PKc_MEK2 Catalytic dom 94.6 0.057 1.2E-06 52.3 5.5 55 341-395 5-61 (331)
83 cd05036 PTKc_ALK_LTK Catalytic 94.6 0.046 9.9E-07 51.3 4.6 56 340-395 5-67 (277)
84 cd05062 PTKc_IGF-1R Catalytic 94.5 0.049 1.1E-06 51.1 4.7 57 339-395 4-67 (277)
85 cd06644 STKc_STK10_LOK Catalyt 94.5 0.055 1.2E-06 51.1 5.1 53 343-395 14-67 (292)
86 cd05596 STKc_ROCK Catalytic do 94.5 0.032 6.8E-07 55.3 3.5 57 339-395 41-101 (370)
87 cd05056 PTKc_FAK Catalytic dom 94.5 0.051 1.1E-06 50.6 4.8 53 343-395 8-65 (270)
88 cd06650 PKc_MEK1 Catalytic dom 94.5 0.061 1.3E-06 52.3 5.4 55 341-395 5-61 (333)
89 PTZ00283 serine/threonine prot 94.5 0.04 8.8E-07 56.9 4.3 58 338-395 29-89 (496)
90 KOG0201 Serine/threonine prote 94.4 0.056 1.2E-06 53.6 4.9 53 343-395 15-69 (467)
91 PTZ00036 glycogen synthase kin 94.4 0.046 1E-06 55.5 4.6 52 340-395 65-117 (440)
92 cd05106 PTKc_CSF-1R Catalytic 94.4 0.049 1.1E-06 54.0 4.6 53 342-394 39-98 (374)
93 cd06608 STKc_myosinIII_like Ca 94.4 0.054 1.2E-06 50.2 4.7 56 338-394 3-59 (275)
94 cd05092 PTKc_TrkA Catalytic do 94.4 0.05 1.1E-06 51.2 4.4 52 344-395 8-65 (280)
95 KOG0198 MEKK and related serin 94.4 0.058 1.3E-06 52.2 4.9 53 343-395 19-72 (313)
96 cd06614 STKc_PAK Catalytic dom 94.3 0.061 1.3E-06 50.6 4.9 57 338-395 16-73 (286)
97 cd07880 STKc_p38gamma_MAPK12 C 94.3 0.077 1.7E-06 51.7 5.7 57 339-395 13-72 (343)
98 cd06607 STKc_TAO Catalytic dom 94.2 0.071 1.5E-06 50.9 5.2 55 341-395 15-73 (307)
99 cd06657 STKc_PAK4 Catalytic do 94.2 0.076 1.6E-06 50.5 5.3 48 348-395 27-75 (292)
100 cd06635 STKc_TAO1 Catalytic do 94.2 0.077 1.7E-06 51.0 5.3 53 343-395 27-83 (317)
101 cd06647 STKc_PAK_I Catalytic d 94.1 0.097 2.1E-06 49.7 5.9 55 341-395 19-74 (293)
102 cd06643 STKc_SLK Catalytic dom 94.1 0.08 1.7E-06 49.7 5.2 49 347-395 11-60 (282)
103 cd07873 STKc_PCTAIRE1 Catalyti 94.1 0.092 2E-06 49.9 5.6 53 343-395 8-62 (301)
104 cd05109 PTKc_HER2 Catalytic do 94.1 0.075 1.6E-06 49.8 4.9 54 342-395 8-67 (279)
105 cd06641 STKc_MST3 Catalytic do 94.1 0.1 2.2E-06 49.0 5.8 53 343-395 6-60 (277)
106 PLN00113 leucine-rich repeat r 94.0 0.11 2.3E-06 58.2 6.8 53 339-395 688-741 (968)
107 cd07876 STKc_JNK2 Catalytic do 94.0 0.086 1.9E-06 51.7 5.4 56 340-395 20-78 (359)
108 cd05061 PTKc_InsR Catalytic do 94.0 0.08 1.7E-06 50.0 5.0 55 341-395 6-67 (288)
109 cd06642 STKc_STK25-YSK1 Cataly 94.0 0.048 1E-06 51.1 3.4 49 347-395 10-60 (277)
110 cd05051 PTKc_DDR Catalytic dom 94.0 0.091 2E-06 49.6 5.3 54 342-395 6-77 (296)
111 cd07844 STKc_PCTAIRE_like Cata 93.9 0.089 1.9E-06 49.6 5.2 55 341-395 5-61 (291)
112 cd05621 STKc_ROCK2 Catalytic d 93.9 0.071 1.5E-06 52.8 4.6 59 337-395 39-101 (370)
113 cd05091 PTKc_Ror2 Catalytic do 93.9 0.081 1.8E-06 49.6 4.9 49 347-395 11-66 (283)
114 cd05079 PTKc_Jak1_rpt2 Catalyt 93.8 0.09 2E-06 49.5 5.0 53 343-395 6-64 (284)
115 KOG0594 Protein kinase PCTAIRE 93.8 0.059 1.3E-06 51.9 3.6 50 346-395 16-68 (323)
116 cd05097 PTKc_DDR_like Catalyti 93.8 0.068 1.5E-06 50.7 4.1 54 342-395 6-75 (295)
117 cd06654 STKc_PAK1 Catalytic do 93.8 0.12 2.6E-06 49.1 5.7 55 341-395 20-75 (296)
118 PTZ00426 cAMP-dependent protei 93.7 0.08 1.7E-06 51.8 4.6 54 342-395 31-89 (340)
119 cd07845 STKc_CDK10 Catalytic d 93.7 0.1 2.2E-06 49.9 5.1 56 340-395 6-64 (309)
120 TIGR01982 UbiB 2-polyprenylphe 93.7 0.12 2.5E-06 52.7 5.7 48 341-392 118-165 (437)
121 cd05622 STKc_ROCK1 Catalytic d 93.7 0.075 1.6E-06 52.6 4.3 63 333-395 35-101 (371)
122 KOG2052 Activin A type IB rece 93.7 0.075 1.6E-06 52.9 4.1 44 345-392 215-258 (513)
123 cd05066 PTKc_EphR_A Catalytic 93.6 0.11 2.4E-06 48.4 5.1 54 342-395 5-63 (267)
124 cd06645 STKc_MAP4K3 Catalytic 93.6 0.062 1.4E-06 49.9 3.4 54 342-395 10-64 (267)
125 KOG0199 ACK and related non-re 93.6 0.073 1.6E-06 55.9 4.0 49 347-395 116-169 (1039)
126 KOG0196 Tyrosine kinase, EPH ( 93.6 0.064 1.4E-06 56.9 3.7 51 345-395 633-688 (996)
127 cd06620 PKc_MAPKK_Byr1_like Ca 93.6 0.076 1.6E-06 50.0 4.0 51 345-395 9-61 (284)
128 cd06659 STKc_PAK6 Catalytic do 93.6 0.11 2.3E-06 49.6 5.0 49 347-395 27-76 (297)
129 cd05094 PTKc_TrkC Catalytic do 93.5 0.091 2E-06 49.7 4.4 53 343-395 7-65 (291)
130 cd05048 PTKc_Ror Catalytic Dom 93.5 0.11 2.3E-06 48.8 4.8 54 342-395 6-66 (283)
131 cd07875 STKc_JNK1 Catalytic do 93.5 0.14 3E-06 50.4 5.8 56 340-395 23-81 (364)
132 cd06655 STKc_PAK2 Catalytic do 93.5 0.097 2.1E-06 49.8 4.6 54 342-395 20-74 (296)
133 KOG0598 Ribosomal protein S6 k 93.5 0.07 1.5E-06 51.7 3.5 55 341-395 25-83 (357)
134 cd05095 PTKc_DDR2 Catalytic do 93.5 0.093 2E-06 49.8 4.4 55 341-395 5-77 (296)
135 cd06658 STKc_PAK5 Catalytic do 93.4 0.14 2.9E-06 48.7 5.4 49 347-395 28-77 (292)
136 KOG0663 Protein kinase PITSLRE 93.4 0.049 1.1E-06 52.4 2.2 53 343-395 78-133 (419)
137 cd05088 PTKc_Tie2 Catalytic do 93.3 0.12 2.6E-06 49.3 5.0 54 341-394 7-64 (303)
138 KOG4278 Protein tyrosine kinas 93.2 0.064 1.4E-06 55.5 3.0 49 346-395 272-321 (1157)
139 cd05144 RIO2_C RIO kinase fami 93.2 0.16 3.4E-06 45.5 5.3 33 343-375 17-49 (198)
140 KOG0032 Ca2+/calmodulin-depend 93.2 0.1 2.2E-06 52.1 4.3 49 347-395 41-93 (382)
141 cd07874 STKc_JNK3 Catalytic do 93.2 0.14 3E-06 50.1 5.3 57 339-395 15-74 (355)
142 PF03109 ABC1: ABC1 family; I 93.1 0.047 1E-06 45.1 1.6 48 341-392 12-59 (119)
143 cd07866 STKc_BUR1 Catalytic do 93.1 0.14 3E-06 48.6 5.1 56 340-395 7-65 (311)
144 cd06616 PKc_MKK4 Catalytic dom 93.1 0.097 2.1E-06 49.2 3.9 51 345-395 8-60 (288)
145 cd06633 STKc_TAO3 Catalytic do 93.1 0.18 3.8E-06 48.4 5.7 52 344-395 24-79 (313)
146 cd07855 STKc_ERK5 Catalytic do 93.1 0.18 3.8E-06 48.9 5.8 55 341-395 5-62 (334)
147 PLN03225 Serine/threonine-prot 93.0 0.13 2.7E-06 54.2 4.9 37 339-375 130-171 (566)
148 cd05057 PTKc_EGFR_like Catalyt 93.0 0.14 3E-06 48.0 4.8 53 343-395 9-67 (279)
149 cd07858 STKc_TEY_MAPK_plant Ca 93.0 0.17 3.6E-06 49.2 5.4 55 341-395 5-62 (337)
150 cd05080 PTKc_Tyk2_rpt2 Catalyt 92.9 0.15 3.2E-06 47.9 4.9 51 345-395 8-64 (283)
151 cd06640 STKc_MST4 Catalytic do 92.9 0.14 3E-06 48.0 4.7 53 343-395 6-60 (277)
152 cd05110 PTKc_HER4 Catalytic do 92.9 0.16 3.4E-06 48.5 5.0 54 342-395 8-67 (303)
153 cd05032 PTKc_InsR_like Catalyt 92.9 0.15 3.2E-06 47.5 4.8 54 342-395 7-67 (277)
154 KOG0605 NDR and related serine 92.9 0.13 2.8E-06 52.3 4.4 54 339-392 139-196 (550)
155 cd07865 STKc_CDK9 Catalytic do 92.8 0.19 4.2E-06 47.6 5.6 55 341-395 12-69 (310)
156 cd07843 STKc_CDC2L1 Catalytic 92.8 0.15 3.2E-06 48.2 4.7 54 342-395 6-62 (293)
157 cd05055 PTKc_PDGFR Catalytic d 92.8 0.13 2.8E-06 49.2 4.2 54 341-394 35-95 (302)
158 cd05054 PTKc_VEGFR Catalytic d 92.7 0.12 2.5E-06 50.5 3.9 52 343-394 9-67 (337)
159 cd05053 PTKc_FGFR Catalytic do 92.6 0.13 2.8E-06 48.5 4.0 54 341-394 12-72 (293)
160 cd07852 STKc_MAPK15 Catalytic 92.6 0.13 2.7E-06 50.0 3.9 54 341-394 7-63 (337)
161 cd07850 STKc_JNK Catalytic dom 92.6 0.2 4.3E-06 49.0 5.4 56 340-395 15-73 (353)
162 cd06648 STKc_PAK_II Catalytic 92.6 0.26 5.6E-06 46.5 6.0 50 346-395 24-74 (285)
163 PHA03212 serine/threonine kina 92.5 0.17 3.6E-06 50.6 4.9 49 341-395 92-141 (391)
164 KOG0667 Dual-specificity tyros 92.4 0.17 3.7E-06 52.4 4.8 49 346-395 191-240 (586)
165 cd06618 PKc_MKK7 Catalytic dom 92.2 0.28 6E-06 46.5 5.7 53 342-394 16-70 (296)
166 cd05111 PTK_HER3 Pseudokinase 92.1 0.23 5E-06 46.6 5.1 53 342-394 8-66 (279)
167 cd07851 STKc_p38 Catalytic dom 92.1 0.21 4.6E-06 48.6 4.9 56 340-395 14-72 (343)
168 PTZ00024 cyclin-dependent prot 91.9 0.25 5.4E-06 47.8 5.1 49 347-395 15-78 (335)
169 KOG0577 Serine/threonine prote 91.7 0.14 3E-06 53.0 3.0 53 343-395 28-84 (948)
170 cd05610 STKc_MASTL Catalytic d 91.6 0.27 6E-06 52.8 5.5 55 341-395 4-62 (669)
171 KOG0661 MAPK related serine/th 91.6 0.094 2E-06 52.6 1.7 48 347-395 16-66 (538)
172 PHA03211 serine/threonine kina 91.3 0.23 4.9E-06 50.9 4.3 49 341-395 169-218 (461)
173 smart00090 RIO RIO-like kinase 91.3 0.27 5.8E-06 45.7 4.4 33 343-375 30-64 (237)
174 cd06634 STKc_TAO2 Catalytic do 91.2 0.27 5.9E-06 47.0 4.5 53 343-395 17-73 (308)
175 KOG4250 TANK binding protein k 91.1 0.11 2.4E-06 54.5 1.7 50 346-395 18-69 (732)
176 cd05101 PTKc_FGFR2 Catalytic d 90.8 0.3 6.4E-06 46.5 4.4 53 342-394 16-77 (304)
177 KOG0574 STE20-like serine/thre 90.7 0.049 1.1E-06 51.6 -1.1 45 346-392 38-83 (502)
178 KOG1006 Mitogen-activated prot 90.7 0.17 3.7E-06 47.4 2.3 47 347-393 70-118 (361)
179 cd05098 PTKc_FGFR1 Catalytic d 90.7 0.31 6.8E-06 46.4 4.3 53 342-394 19-80 (307)
180 KOG4257 Focal adhesion tyrosin 90.6 0.28 6.1E-06 51.1 4.0 50 346-395 394-449 (974)
181 KOG0615 Serine/threonine prote 90.5 0.38 8.1E-06 47.7 4.6 50 346-395 177-234 (475)
182 PHA03209 serine/threonine kina 90.5 0.42 9.1E-06 46.9 5.2 51 339-395 64-115 (357)
183 PRK04750 ubiB putative ubiquin 90.5 0.41 8.9E-06 49.9 5.2 35 340-375 119-154 (537)
184 KOG0694 Serine/threonine prote 90.3 0.48 1E-05 49.7 5.4 53 340-392 367-423 (694)
185 PTZ00266 NIMA-related protein 90.0 0.3 6.5E-06 54.3 4.0 57 339-395 11-70 (1021)
186 cd05099 PTKc_FGFR4 Catalytic d 89.9 0.49 1.1E-05 45.3 5.0 53 342-394 13-74 (314)
187 PRK09605 bifunctional UGMP fam 89.5 0.46 1E-05 49.6 4.8 56 340-395 332-394 (535)
188 KOG0581 Mitogen-activated prot 89.3 0.83 1.8E-05 44.5 5.9 57 331-394 76-134 (364)
189 PTZ00267 NIMA-related protein 89.0 0.54 1.2E-05 48.3 4.8 53 343-395 69-123 (478)
190 KOG1167 Serine/threonine prote 88.6 0.25 5.4E-06 48.8 1.9 57 336-394 31-91 (418)
191 KOG0596 Dual specificity; seri 88.4 0.19 4.1E-06 51.5 0.9 49 347-395 367-417 (677)
192 PHA03207 serine/threonine kina 88.2 0.61 1.3E-05 46.4 4.5 49 342-395 93-144 (392)
193 PHA02882 putative serine/threo 88.1 0.62 1.3E-05 44.2 4.3 32 341-372 12-47 (294)
194 KOG0578 p21-activated serine/t 88.0 0.69 1.5E-05 47.4 4.6 52 343-395 275-328 (550)
195 cd05100 PTKc_FGFR3 Catalytic d 87.9 0.8 1.7E-05 44.3 5.0 52 343-394 14-74 (334)
196 KOG0582 Ste20-like serine/thre 87.5 0.8 1.7E-05 45.9 4.6 52 343-394 28-81 (516)
197 KOG0583 Serine/threonine prote 87.4 0.84 1.8E-05 45.4 4.8 56 340-395 16-77 (370)
198 KOG0660 Mitogen-activated prot 87.1 0.56 1.2E-05 45.6 3.2 53 343-395 24-79 (359)
199 KOG0585 Ca2+/calmodulin-depend 86.4 1.1 2.3E-05 45.4 4.8 57 339-395 95-166 (576)
200 KOG1164 Casein kinase (serine/ 86.1 0.67 1.4E-05 44.9 3.3 54 342-395 19-74 (322)
201 KOG0611 Predicted serine/threo 85.9 0.31 6.7E-06 48.2 0.8 48 347-394 59-110 (668)
202 KOG0607 MAP kinase-interacting 85.8 0.62 1.3E-05 44.9 2.7 59 330-393 72-131 (463)
203 COG0661 AarF Predicted unusual 85.7 0.95 2.1E-05 47.0 4.3 50 339-392 124-173 (517)
204 PHA03210 serine/threonine kina 85.6 0.37 8.1E-06 49.8 1.3 55 340-395 147-221 (501)
205 KOG2345 Serine/threonine prote 85.5 0.64 1.4E-05 43.2 2.6 50 346-395 26-76 (302)
206 cd05114 PTKc_Tec_Rlk Catalytic 85.1 0.72 1.6E-05 42.4 2.9 33 343-375 6-38 (256)
207 KOG0986 G protein-coupled rece 84.5 0.28 6E-06 49.2 -0.2 56 340-395 184-243 (591)
208 KOG1163 Casein kinase (serine/ 84.1 0.89 1.9E-05 42.2 2.8 35 341-375 15-50 (341)
209 PRK10359 lipopolysaccharide co 83.9 1.3 2.8E-05 41.0 3.9 54 340-394 30-92 (232)
210 KOG0587 Traf2- and Nck-interac 83.6 1.2 2.5E-05 48.2 3.9 63 331-394 9-72 (953)
211 KOG4279 Serine/threonine prote 82.9 1.2 2.6E-05 47.2 3.6 49 347-395 581-630 (1226)
212 KOG0668 Casein kinase II, alph 82.7 0.49 1.1E-05 43.5 0.6 50 343-395 40-90 (338)
213 PF07645 EGF_CA: Calcium-bindi 82.7 0.61 1.3E-05 30.7 0.9 32 238-269 3-36 (42)
214 cd05112 PTKc_Itk Catalytic dom 82.2 1.3 2.7E-05 40.7 3.2 34 343-376 6-39 (256)
215 cd00053 EGF Epidermal growth f 82.1 1.2 2.5E-05 27.2 2.1 29 240-268 2-31 (36)
216 KOG0579 Ste20-like serine/thre 82.1 0.31 6.7E-06 50.8 -1.0 47 347-393 38-85 (1187)
217 KOG0586 Serine/threonine prote 81.0 2.4 5.2E-05 44.0 4.9 56 340-395 55-113 (596)
218 cd05059 PTKc_Tec_like Catalyti 79.9 1.5 3.2E-05 40.3 2.8 34 343-376 6-39 (256)
219 cd05113 PTKc_Btk_Bmx Catalytic 77.4 1.8 4E-05 39.8 2.7 31 346-376 9-39 (256)
220 KOG0200 Fibroblast/platelet-de 77.3 3.4 7.5E-05 43.9 5.0 48 347-394 302-358 (609)
221 KOG1166 Mitotic checkpoint ser 76.5 1.8 3.9E-05 48.0 2.6 33 341-373 698-730 (974)
222 PF07974 EGF_2: EGF-like domai 76.2 2.5 5.4E-05 26.2 2.1 24 244-268 6-29 (32)
223 PF01683 EB: EB module; Inter 75.3 2.8 6E-05 28.8 2.5 34 234-270 16-49 (52)
224 KOG0666 Cyclin C-dependent kin 75.2 1.3 2.8E-05 42.6 0.9 54 342-395 25-85 (438)
225 KOG0592 3-phosphoinositide-dep 75.2 1.6 3.5E-05 44.8 1.7 37 339-375 71-108 (604)
226 smart00179 EGF_CA Calcium-bind 74.3 2.6 5.7E-05 26.4 2.0 30 238-267 3-33 (39)
227 cd05082 PTKc_Csk Catalytic dom 71.8 4 8.6E-05 37.4 3.4 34 342-376 7-40 (256)
228 KOG0616 cAMP-dependent protein 71.4 3.8 8.3E-05 39.2 3.1 54 342-395 45-102 (355)
229 KOG1165 Casein kinase (serine/ 71.4 2.9 6.3E-05 40.7 2.3 32 342-373 29-61 (449)
230 PF09064 Tme5_EGF_like: Thromb 70.2 2.4 5.2E-05 26.5 1.0 19 251-269 11-29 (34)
231 cd05083 PTKc_Chk Catalytic dom 70.2 2.9 6.3E-05 38.2 2.1 32 343-375 8-39 (254)
232 PF12661 hEGF: Human growth fa 69.9 1.4 3E-05 21.5 -0.1 11 259-269 1-11 (13)
233 KOG1027 Serine/threonine prote 69.8 2.1 4.5E-05 46.2 1.1 47 342-392 510-557 (903)
234 PHA03390 pk1 serine/threonine- 69.8 10 0.00023 35.1 5.8 41 335-375 8-51 (267)
235 KOG0589 Serine/threonine prote 68.8 4.3 9.4E-05 40.9 3.1 52 344-395 7-61 (426)
236 KOG0584 Serine/threonine prote 68.3 1.8 3.9E-05 45.1 0.3 49 347-395 46-99 (632)
237 KOG4721 Serine/threonine prote 67.7 2.7 5.9E-05 43.6 1.4 52 329-395 119-170 (904)
238 cd00054 EGF_CA Calcium-binding 67.1 4.8 0.0001 24.7 2.0 31 238-268 3-34 (38)
239 PF00008 EGF: EGF-like domain 66.2 2.7 5.9E-05 25.8 0.7 25 244-268 4-30 (32)
240 KOG0612 Rho-associated, coiled 66.0 2 4.4E-05 47.8 0.1 57 335-391 69-129 (1317)
241 KOG0984 Mitogen-activated prot 66.0 4.7 0.0001 36.7 2.4 49 345-393 50-100 (282)
242 KOG0610 Putative serine/threon 65.8 5.4 0.00012 39.8 2.9 48 347-394 83-134 (459)
243 KOG0669 Cyclin T-dependent kin 63.5 0.63 1.4E-05 43.4 -3.7 48 347-394 23-73 (376)
244 KOG0664 Nemo-like MAPK-related 62.6 4.4 9.5E-05 38.3 1.6 50 343-393 55-108 (449)
245 PF08276 PAN_2: PAN-like domai 61.7 8.1 0.00018 28.0 2.6 23 288-310 1-23 (66)
246 KOG0690 Serine/threonine prote 61.3 5.1 0.00011 38.9 1.8 54 341-394 168-225 (516)
247 KOG0670 U4/U6-associated splic 60.3 8.9 0.00019 39.6 3.4 63 330-395 423-486 (752)
248 PF12947 EGF_3: EGF domain; I 59.8 3 6.5E-05 26.6 0.0 27 243-269 5-32 (36)
249 KOG0671 LAMMER dual specificit 59.6 3.6 7.7E-05 40.6 0.5 52 342-394 90-142 (415)
250 PF12662 cEGF: Complement Clr- 58.5 5.5 0.00012 22.9 1.0 11 259-269 3-13 (24)
251 KOG1290 Serine/threonine prote 56.8 14 0.0003 37.8 4.1 50 345-395 82-132 (590)
252 KOG0983 Mitogen-activated prot 55.0 21 0.00045 34.1 4.6 28 348-375 99-127 (391)
253 KOG1151 Tousled-like protein k 51.2 3.1 6.7E-05 41.9 -1.4 28 347-374 469-497 (775)
254 KOG1235 Predicted unusual prot 49.5 31 0.00066 36.1 5.4 36 339-375 160-195 (538)
255 PF13360 PQQ_2: PQQ-like domai 49.0 31 0.00067 31.0 4.9 51 46-99 2-62 (238)
256 smart00181 EGF Epidermal growt 47.1 17 0.00036 22.1 2.0 24 244-268 6-30 (35)
257 KOG4645 MAPKKK (MAP kinase kin 46.1 10 0.00022 43.2 1.3 56 339-394 1233-1291(1509)
258 COG2112 Predicted Ser/Thr prot 45.8 34 0.00074 30.6 4.3 45 347-394 28-72 (201)
259 cd05120 APH_ChoK_like Aminogly 45.3 28 0.00061 28.1 3.7 30 346-376 3-32 (155)
260 PF14531 Kinase-like: Kinase-l 44.7 43 0.00094 32.1 5.2 48 346-393 17-68 (288)
261 KOG0696 Serine/threonine prote 43.6 11 0.00024 37.8 1.0 35 342-376 350-385 (683)
262 PRK01723 3-deoxy-D-manno-octul 39.6 48 0.0011 30.5 4.7 48 347-395 37-98 (239)
263 KOG1345 Serine/threonine kinas 38.9 45 0.00097 31.8 4.2 55 327-388 16-71 (378)
264 PF13095 FTA2: Kinetochore Sim 38.1 36 0.00078 30.9 3.4 55 341-396 37-113 (207)
265 KOG4717 Serine/threonine prote 34.0 25 0.00054 36.4 1.8 48 347-394 24-74 (864)
266 PF01436 NHL: NHL repeat; Int 33.1 45 0.00099 19.5 2.2 18 43-60 9-26 (28)
267 KOG4289 Cadherin EGF LAG seven 30.6 24 0.00051 40.7 1.1 40 243-282 1244-1284(2531)
268 KOG1214 Nidogen and related ba 29.2 40 0.00087 36.7 2.5 32 238-270 828-860 (1289)
269 PF12946 EGF_MSP1_1: MSP1 EGF 27.9 18 0.00039 23.2 -0.2 26 244-269 5-32 (37)
270 smart00564 PQQ beta-propeller 27.9 74 0.0016 18.8 2.7 18 45-62 14-32 (33)
271 KOG0033 Ca2+/calmodulin-depend 27.5 2.7 5.8E-05 39.2 -5.6 49 347-395 17-68 (355)
272 COG4393 Predicted membrane pro 27.2 53 0.0011 31.9 2.7 39 237-282 334-374 (405)
273 KOG0588 Serine/threonine prote 27.0 48 0.001 35.4 2.6 52 341-392 12-67 (786)
274 COG0478 RIO-like serine/threon 26.9 64 0.0014 30.9 3.1 27 347-373 97-123 (304)
275 PHA02887 EGF-like protein; Pro 26.5 34 0.00075 27.9 1.1 32 236-268 82-118 (126)
276 KOG0599 Phosphorylase kinase g 25.7 39 0.00084 32.3 1.5 54 341-394 17-79 (411)
277 PF10080 DUF2318: Predicted me 25.4 1.7E+02 0.0038 23.3 5.0 41 238-283 36-77 (102)
278 PF06247 Plasmod_Pvs28: Plasmo 25.1 45 0.00098 29.6 1.7 35 243-284 49-89 (197)
279 KOG1152 Signal transduction se 25.0 63 0.0014 34.1 3.0 33 343-375 563-596 (772)
280 PF01011 PQQ: PQQ enzyme repea 24.9 99 0.0021 19.4 2.9 23 44-66 7-30 (38)
281 PF13360 PQQ_2: PQQ-like domai 24.6 89 0.0019 27.9 3.7 53 44-99 43-102 (238)
282 PF11403 Yeast_MT: Yeast metal 24.1 59 0.0013 20.2 1.6 20 244-267 12-31 (40)
283 PF10681 Rot1: Chaperone for p 23.1 3.6E+02 0.0079 24.4 7.0 112 5-144 7-132 (212)
284 PRK10695 hypothetical protein; 23.0 2.6E+02 0.0057 31.0 7.2 64 78-145 334-418 (859)
285 TIGR03300 assembly_YfgL outer 22.2 1.8E+02 0.004 28.3 5.7 52 44-98 72-130 (377)
286 PRK11138 outer membrane biogen 20.9 1.5E+02 0.0032 29.4 4.7 62 33-98 62-145 (394)
287 PF14670 FXa_inhibition: Coagu 20.2 37 0.00081 21.5 0.2 15 256-270 17-31 (36)
No 1
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=99.95 E-value=6.9e-28 Score=197.56 Aligned_cols=109 Identities=46% Similarity=0.995 Sum_probs=102.9
Q ss_pred EEcCCCCCeeeeec-ccccceeEEEEEEEcCCeEEEEEEeCCCCeEEEEEEecccCeEEEEEeecCCCceEEEeeccCCc
Q 038392 161 YRTGPWNGIIFSAS-SLRLNLIFKYHFVSNEDELYYTFYLTDKAVISRIVMNQTVSLRQRFIWRKKNQSWELYSNLPKDQ 239 (397)
Q Consensus 161 w~~g~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~~l~~y~~~~~~~~W~~~~~~p~~~ 239 (397)
||+|+|+|..|+++ +|....++.+.|+.++++.+++|.+.+.+.++|++|+++| ++++|.|.+..+.|..+|.+|.++
T Consensus 1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G-~l~~~~w~~~~~~W~~~~~~p~d~ 79 (110)
T PF00954_consen 1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDG-QLQRYIWNESTQSWSVFWSAPKDQ 79 (110)
T ss_pred CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeee-EEEEEEEecCCCcEEEEEEecccC
Confidence 89999999999999 8887777889999999999999998888899999999999 999999999999999999999999
Q ss_pred ccccCCCCCceeeccCCCCCccccCCcccCC
Q 038392 240 CDSYGLCGANGIFIISQSPICQCLEGFLTNS 270 (397)
Q Consensus 240 C~~~~~CG~~giC~~~~~~~C~C~~gf~~~~ 270 (397)
||+|+.||+||+|+.+..+.|+|++||+|++
T Consensus 80 Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n 110 (110)
T PF00954_consen 80 CDVYGFCGPNGICNSNNSPKCSCLPGFEPKN 110 (110)
T ss_pred CCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence 9999999999999888889999999999874
No 2
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=99.90 E-value=5.4e-25 Score=181.17 Aligned_cols=100 Identities=46% Similarity=0.669 Sum_probs=75.4
Q ss_pred CCCCCCCCCCC---C--cCCCCcEEEEcCCCCEEEec-CCCCCC-CCcEEeeeecCCCEEEEeccCCCCCcccccccCCC
Q 038392 31 PRRLNPDPDPD---F--AIPTGNLVLTSQNKSVVWSA-NLSKEV-RTPVVLQLLDSGNLVLRGERDGGSETYLWQSLDYP 103 (397)
Q Consensus 31 ~~r~~pv~~~s---~--l~~~G~LvL~d~~g~~vWss-~~~~~~-~~~~a~~LldsGNlVL~~~~~~~~~~~~WqSFd~P 103 (397)
.+|+.|+...+ . |+.||+|+|+|.+++.+|++ ++.+.. .+..| .|+|+|||||++.. +.+||||||||
T Consensus 8 an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~-~L~~~GNlvl~d~~----~~~lW~Sf~~p 82 (114)
T PF01453_consen 8 ANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYL-VLQDDGNLVLYDSS----GNVLWQSFDYP 82 (114)
T ss_dssp --TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEE-EEETTSEEEEEETT----SEEEEESTTSS
T ss_pred cccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEE-EEeCCCCEEEEeec----ceEEEeecCCC
Confidence 45888985322 2 78999999999998999999 655533 46777 99999999999965 78999999999
Q ss_pred CCCcCCCceeccccCCCceeEEEEccCCCCCC
Q 038392 104 SDTLLPGMKLGWDLKTGLERRITSWKSSDDPS 135 (397)
Q Consensus 104 TDTlLpgq~l~~~~~t~~~~~L~S~~s~~dps 135 (397)
|||+||+|+|+.+..++.+..|+||++..|||
T Consensus 83 tdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 83 TDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp S-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred ccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 99999999999987776666799999999996
No 3
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=99.73 E-value=1.4e-17 Score=137.70 Aligned_cols=90 Identities=33% Similarity=0.495 Sum_probs=68.9
Q ss_pred CCCeEEEeecCCCCCCceEEee----C-------CCCCCCCCCCCC--cCCCCcEEEEcCCCCEEEecCCCCCCCCcEEe
Q 038392 8 RPVWKKSGFNSGSGERKWHPGL----E-------PRRLNPDPDPDF--AIPTGNLVLTSQNKSVVWSANLSKEVRTPVVL 74 (397)
Q Consensus 8 ~~~~f~lGF~~~~~~~~~ylgi----~-------~~r~~pv~~~s~--l~~~G~LvL~d~~g~~vWss~~~~~~~~~~a~ 74 (397)
++.| ++|||.+......+.+| . .+|+.|...+.. |+.+|+|+|+|.+|.++|++++.+.....++
T Consensus 14 ~~~f-~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~~~~~~~~- 91 (116)
T cd00028 14 GSLF-ELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVL- 91 (116)
T ss_pred CCcE-EEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccCCCCceEE-
Confidence 3444 89999987543266666 1 126677444444 8889999999999999999998752234566
Q ss_pred eeecCCCEEEEeccCCCCCcccccccCCC
Q 038392 75 QLLDSGNLVLRGERDGGSETYLWQSLDYP 103 (397)
Q Consensus 75 ~LldsGNlVL~~~~~~~~~~~~WqSFd~P 103 (397)
+|+|+|||||++.+ +++||||||||
T Consensus 92 ~L~ddGnlvl~~~~----~~~~W~Sf~~P 116 (116)
T cd00028 92 VLLDDGNLVLYDSD----GNFLWQSFDYP 116 (116)
T ss_pred EEeCCCCEEEECCC----CCEEEcCCCCC
Confidence 99999999999986 78999999999
No 4
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=99.66 E-value=3.5e-16 Score=128.97 Aligned_cols=88 Identities=34% Similarity=0.483 Sum_probs=68.2
Q ss_pred CCCeEEEeecCCCCCCceEEee----C-------CCCCCCCCCCCC--cCCCCcEEEEcCCCCEEEecCCCCCCCCcEEe
Q 038392 8 RPVWKKSGFNSGSGERKWHPGL----E-------PRRLNPDPDPDF--AIPTGNLVLTSQNKSVVWSANLSKEVRTPVVL 74 (397)
Q Consensus 8 ~~~~f~lGF~~~~~~~~~ylgi----~-------~~r~~pv~~~s~--l~~~G~LvL~d~~g~~vWss~~~~~~~~~~a~ 74 (397)
++.| ++|||.+... ..+.+| . .+|+.|+..+.. |..+|+|+|+|.+|.++|++++.......++
T Consensus 14 ~~~f-~~G~~~~~~q-~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~~~~~~~- 90 (114)
T smart00108 14 NSLF-ELGFFTLIMQ-NDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVL- 90 (114)
T ss_pred CCcE-eeeccccCCC-CCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccCCCCceEE-
Confidence 3444 9999998644 455555 1 127778776544 8889999999999999999998732334566
Q ss_pred eeecCCCEEEEeccCCCCCcccccccCC
Q 038392 75 QLLDSGNLVLRGERDGGSETYLWQSLDY 102 (397)
Q Consensus 75 ~LldsGNlVL~~~~~~~~~~~~WqSFd~ 102 (397)
+|+|+|||||++.. +.+|||||||
T Consensus 91 ~L~ddGnlvl~~~~----~~~~W~Sf~~ 114 (114)
T smart00108 91 VLLDDGNLVIYDSD----GNFLWQSFDY 114 (114)
T ss_pred EEeCCCCEEEECCC----CCEEeCCCCC
Confidence 99999999999976 6799999997
No 5
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=2.4e-10 Score=112.74 Aligned_cols=69 Identities=41% Similarity=0.623 Sum_probs=61.6
Q ss_pred cceeEeHHHHHHHhcCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 327 SYHCFELATIAIATDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 327 ~~~~~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..+.|++.+|..||++|+..++||+|+||.||||.++++..||||++.....+..+||.+|+++|++++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~ 129 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR 129 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999999999999999997643332678999999999886
No 6
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=98.75 E-value=4.5e-08 Score=80.50 Aligned_cols=85 Identities=21% Similarity=0.296 Sum_probs=60.5
Q ss_pred cCCCCcEEEEcCC-CCEEEecCCCCCCC-CcEEeeeecCCCEEEEeccCCCCCcccccccCCCCCCcCCCceeccccCCC
Q 038392 43 AIPTGNLVLTSQN-KSVVWSANLSKEVR-TPVVLQLLDSGNLVLRGERDGGSETYLWQSLDYPSDTLLPGMKLGWDLKTG 120 (397)
Q Consensus 43 l~~~G~LvL~d~~-g~~vWss~~~~~~~-~~~a~~LldsGNlVL~~~~~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~t~ 120 (397)
...+|+||+++.. +.+||++++..+.. ...+ .|.++|||||++.+ +.++|+|=.
T Consensus 26 ~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l-~l~~dGnLvl~~~~----g~~vW~S~t------------------- 81 (114)
T smart00108 26 MQNDYNLILYKSSSRTVVWVANRDNPVSDSCTL-TLQSDGNLVLYDGD----GRVVWSSNT------------------- 81 (114)
T ss_pred CCCCEEEEEEECCCCcEEEECCCCCCCCCCEEE-EEeCCCCEEEEeCC----CCEEEEecc-------------------
Confidence 3468999999765 57999999865322 3456 89999999999875 678898810
Q ss_pred ceeEEEEccCCCCCCCccceeeeccCCCcEEEEEcCCeeEEEcC
Q 038392 121 LERRITSWKSSDDPSPGDFFWKIERQFYPELVMWKGSRKFYRTG 164 (397)
Q Consensus 121 ~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~~g 164 (397)
....+.+.+.|+++|++.++- ....+.|.+.
T Consensus 82 ------------~~~~~~~~~~L~ddGnlvl~~-~~~~~~W~Sf 112 (114)
T smart00108 82 ------------TGANGNYVLVLLDDGNLVIYD-SDGNFLWQSF 112 (114)
T ss_pred ------------cCCCCceEEEEeCCCCEEEEC-CCCCEEeCCC
Confidence 013456789999999865542 2346788763
No 7
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=98.68 E-value=1e-07 Score=78.59 Aligned_cols=86 Identities=21% Similarity=0.256 Sum_probs=61.4
Q ss_pred cCC-CCcEEEEcCC-CCEEEecCCCCC-CCCcEEeeeecCCCEEEEeccCCCCCcccccccCCCCCCcCCCceeccccCC
Q 038392 43 AIP-TGNLVLTSQN-KSVVWSANLSKE-VRTPVVLQLLDSGNLVLRGERDGGSETYLWQSLDYPSDTLLPGMKLGWDLKT 119 (397)
Q Consensus 43 l~~-~G~LvL~d~~-g~~vWss~~~~~-~~~~~a~~LldsGNlVL~~~~~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~t 119 (397)
... +|+||+++.. +++||++|+..+ .....+ .|.++|||||++.+ +.++|+|=-
T Consensus 26 ~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l-~l~~dGnLvl~~~~----g~~vW~S~~------------------ 82 (116)
T cd00028 26 MQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTL-TLQSDGNLVIYDGS----GTVVWSSNT------------------ 82 (116)
T ss_pred CCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEE-EEecCCCeEEEcCC----CcEEEEecc------------------
Confidence 344 8999999765 579999998653 234556 89999999999975 678998721
Q ss_pred CceeEEEEccCCCCCCCccceeeeccCCCcEEEEEcCCeeEEEcCC
Q 038392 120 GLERRITSWKSSDDPSPGDFFWKIERQFYPELVMWKGSRKFYRTGP 165 (397)
Q Consensus 120 ~~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~~g~ 165 (397)
..+.+.+.+.|+++|++.++-. ...+.|.+..
T Consensus 83 -------------~~~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~ 114 (116)
T cd00028 83 -------------TRVNGNYVLVLLDDGNLVLYDS-DGNFLWQSFD 114 (116)
T ss_pred -------------cCCCCceEEEEeCCCCEEEECC-CCCEEEcCCC
Confidence 0024568899999998655422 3567887653
No 8
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=97.44 E-value=0.0003 Score=57.74 Aligned_cols=72 Identities=19% Similarity=0.295 Sum_probs=41.6
Q ss_pred CEEEecCCCCCC----CCcEEeeeecCCCEEEEeccCCCCCcccccc-cCCCCCCcCCCceeccccCCCceeEEEEccCC
Q 038392 57 SVVWSANLSKEV----RTPVVLQLLDSGNLVLRGERDGGSETYLWQS-LDYPSDTLLPGMKLGWDLKTGLERRITSWKSS 131 (397)
Q Consensus 57 ~~vWss~~~~~~----~~~~a~~LldsGNlVL~~~~~~~~~~~~WqS-Fd~PTDTlLpgq~l~~~~~t~~~~~L~S~~s~ 131 (397)
++||..|...+. ....+ .|+++|||||++.. ++++|+| ..
T Consensus 3 tvvW~an~~~p~~~~s~~~~L-~l~~dGnLvl~~~~----~~~iWss~~t------------------------------ 47 (114)
T PF01453_consen 3 TVVWVANRNSPLTSSSGNYTL-ILQSDGNLVLYDSN----GSVIWSSNNT------------------------------ 47 (114)
T ss_dssp -------TTEEEEECETTEEE-EEETTSEEEEEETT----TEEEEE--S-------------------------------
T ss_pred ccccccccccccccccccccc-eECCCCeEEEEcCC----CCEEEEeccc------------------------------
Confidence 589998866422 12445 89999999999975 6779998 10
Q ss_pred CCCCCccceeeeccCCCcEEEEEcCCeeEEEcC
Q 038392 132 DDPSPGDFFWKIERQFYPELVMWKGSRKFYRTG 164 (397)
Q Consensus 132 ~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~~g 164 (397)
.......+.+.|+.+|++.++- ....++|.+-
T Consensus 48 ~~~~~~~~~~~L~~~GNlvl~d-~~~~~lW~Sf 79 (114)
T PF01453_consen 48 SGRGNSGCYLVLQDDGNLVLYD-SSGNVLWQSF 79 (114)
T ss_dssp TTSS-SSEEEEEETTSEEEEEE-TTSEEEEEST
T ss_pred CCccccCeEEEEeCCCCEEEEe-ecceEEEeec
Confidence 0011136788999999855442 3578899873
No 9
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=97.41 E-value=8.9e-05 Score=75.48 Aligned_cols=51 Identities=25% Similarity=0.453 Sum_probs=41.5
Q ss_pred CCCceEcccCCccEEEEEeCCCcEEEEEEeccc--ccccHHHHHHHHHHhhcCCC
Q 038392 344 STNKKLGEGGFGPVYKGTLADGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTKI 396 (397)
Q Consensus 344 ~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~~ 396 (397)
.....||+|.||+||+|..- ..||||+|+.. .....++|++||.++.+.|-
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH 447 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH 447 (678)
T ss_pred hccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcch
Confidence 33468999999999999874 46999999643 34567899999999998873
No 10
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.08 E-value=0.00076 Score=63.05 Aligned_cols=61 Identities=18% Similarity=0.227 Sum_probs=50.2
Q ss_pred HHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 335 TIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 335 ~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+++.+++++.....||+|+||.||+|... ++..+|+|.+........+.|.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~ 63 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK 63 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC
Confidence 35667888888889999999999999865 57789999887655556778999999998775
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.88 E-value=0.0011 Score=64.79 Aligned_cols=55 Identities=24% Similarity=0.420 Sum_probs=43.0
Q ss_pred cCCCCCceEcccCCccEEEEEeCC-CcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+|.....||.|.|+.||||++.. +.+||||.+... .....+....|+.+|.+|+
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~ 67 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK 67 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC
Confidence 455555679999999999999864 889999998653 3334556788999998875
No 12
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.79 E-value=0.0016 Score=67.25 Aligned_cols=48 Identities=25% Similarity=0.484 Sum_probs=35.5
Q ss_pred HhcCCCCCceEcccCCccEEEEEe-----------------CCCcEEEEEEecccccccHHHHHH
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTL-----------------ADGQEIVVKRFSKISEQGLKELKN 386 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l-----------------~~g~~vaVK~l~~~~~~~~~ef~~ 386 (397)
..++|...++||+|+||.||+|.+ ..++.||||++........++|..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~ 207 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLK 207 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHh
Confidence 467899889999999999999974 235689999986543333445554
No 13
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.71 E-value=0.0018 Score=65.27 Aligned_cols=54 Identities=30% Similarity=0.505 Sum_probs=44.1
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
.-|.+ ++||.|.||+||-|..+ .|+.||||.+++. ...++...++||++|.+++
T Consensus 565 Qif~d-evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~ 621 (888)
T KOG4236|consen 565 QIFAD-EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH 621 (888)
T ss_pred HhhhH-hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC
Confidence 33554 69999999999999875 6999999999764 3456788999999998875
No 14
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=96.59 E-value=0.0035 Score=58.20 Aligned_cols=53 Identities=19% Similarity=0.275 Sum_probs=43.5
Q ss_pred CCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|...++||+|+||.||++...+++.+|+|++... ....+.|.+|+.++.+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~ 59 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG-SMSPEAFLAEANLMKQLQ 59 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCC-CCcHHHHHHHHHHHHhcC
Confidence 34555799999999999999989999999998653 345678999999988764
No 15
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.42 E-value=0.0051 Score=60.85 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=43.0
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC--CCcEEEEEEeccc-----ccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA--DGQEIVVKRFSKI-----SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~--~g~~vaVK~l~~~-----~~~~~~ef~~Ev~~l~~l~ 395 (397)
....|...+.||+|+||.||++... +++.+|||++... .....+.|.+|+++|.+++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~ 79 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR 79 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc
Confidence 3456777789999999999999874 5777899987532 1123556999999998775
No 16
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=96.34 E-value=0.006 Score=56.67 Aligned_cols=54 Identities=20% Similarity=0.302 Sum_probs=44.0
Q ss_pred cCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|...+.||+|++|.||+|...+++.+|||.+... ....++|.+|++++.+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~ 59 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLR 59 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCC
Confidence 446666899999999999999888889999998653 345678999999988764
No 17
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=96.18 E-value=0.0063 Score=60.16 Aligned_cols=49 Identities=27% Similarity=0.363 Sum_probs=39.0
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEeccccccc--HHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQG--LKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~--~~ef~~Ev~~l~~l~ 395 (397)
+.||.|+||.||+|....-..||||++....... .++|..|+.+|.+++
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~ 97 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLR 97 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCC
Confidence 4599999999999999755559999996533222 569999999999876
No 18
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=96.16 E-value=0.0095 Score=55.18 Aligned_cols=54 Identities=20% Similarity=0.362 Sum_probs=43.9
Q ss_pred cCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
++|...++||+|++|.||++...+++.+|||.+.. .....++|.+|+.++.+++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~-~~~~~~~~~~e~~~l~~l~ 59 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKP-GTMSPEAFLQEAQIMKKLR 59 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecC-CccCHHHHHHHHHHHhhCC
Confidence 45566679999999999999988888999999865 3345678999999887764
No 19
>PTZ00284 protein kinase; Provisional
Probab=96.15 E-value=0.0044 Score=63.37 Aligned_cols=60 Identities=22% Similarity=0.228 Sum_probs=43.5
Q ss_pred HHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 335 TIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 335 ~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
++...++.|...++||+|+||.||++... .++.||||++... ....+++..|++++.+++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~ 183 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVR 183 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHh
Confidence 34445677877789999999999999875 4788999998643 233455666777666543
No 20
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=96.13 E-value=0.0088 Score=56.30 Aligned_cols=54 Identities=19% Similarity=0.349 Sum_probs=43.0
Q ss_pred CCCCCceEcccCCccEEEEEeC-----CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-----DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-----~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|.....||+|+||.||++... .+..+|||++........++|.+|++++.+++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~ 63 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ 63 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC
Confidence 3444568999999999999753 47899999987655555678999999998775
No 21
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=96.12 E-value=0.0062 Score=61.88 Aligned_cols=49 Identities=35% Similarity=0.527 Sum_probs=39.3
Q ss_pred ceEcccCCccEEEEEeCC--C--cE-EEEEEecc---cccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLAD--G--QE-IVVKRFSK---ISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~--g--~~-vaVK~l~~---~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+||+|.||.||+|++.- + .. ||||.... ......+||.+|+++|.+++
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~ 219 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN 219 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC
Confidence 599999999999998853 2 23 89998863 34566889999999998775
No 22
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=96.11 E-value=0.007 Score=61.90 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=43.1
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEeccccc-ccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRFSKISE-QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l~ 395 (397)
++||+|.||.|....+..+..||||+|+.... .+.++|..|+++|+++|
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk 593 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLK 593 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccC
Confidence 58999999999999998889999999987543 34589999999999986
No 23
>PHA02988 hypothetical protein; Provisional
Probab=96.05 E-value=0.016 Score=54.94 Aligned_cols=62 Identities=19% Similarity=0.349 Sum_probs=45.7
Q ss_pred ceeEeHHHHHHHhcCCCCCceEcccCCccEEEEEeCCCcEEEEEEeccccccc---HHHHHHHHHHhhcCC
Q 038392 328 YHCFELATIAIATDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQG---LKELKNDYFPNYNTK 395 (397)
Q Consensus 328 ~~~~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~---~~ef~~Ev~~l~~l~ 395 (397)
++.++.+++. ......|++|+++.||+|.. +|+.||||++....... .+.|.+|+.+|.+++
T Consensus 12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~ 76 (283)
T PHA02988 12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID 76 (283)
T ss_pred ceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC
Confidence 4455555552 22336899999999999998 68899999986543222 467889999998875
No 24
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.03 E-value=0.009 Score=55.40 Aligned_cols=53 Identities=21% Similarity=0.316 Sum_probs=42.8
Q ss_pred CCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...++||+|++|.||+|...++..+|+|++... ....+.|..|+.++.+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~ 59 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQ 59 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCC
Confidence 45555789999999999999888889999988642 334678999999988764
No 25
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=95.99 E-value=0.0049 Score=57.14 Aligned_cols=57 Identities=18% Similarity=0.355 Sum_probs=45.6
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+..+|.-.++||+|+||.||+|...++..+|+|.+.........++..|++++.+++
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~ 60 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLR 60 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCC
Confidence 344555567899999999999999889999999987644445678999999888765
No 26
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.98 E-value=0.0047 Score=62.04 Aligned_cols=53 Identities=25% Similarity=0.305 Sum_probs=39.0
Q ss_pred CCCCceEcccCCccEEEEE-eCCCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGT-LADGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~-l~~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
|....+||+|.||.|||+. +..|+.||+||+.... .....-..+|+.+|.+|.
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~ 174 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD 174 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC
Confidence 4444689999999999995 5679999999996532 222333568999998764
No 27
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=95.97 E-value=0.013 Score=54.47 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=42.3
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|++|.||++..+++..+|+|++... ....+.|.+|+.++.+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~E~~~l~~l~ 59 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPG-TMSPESFLEEAQIMKKLR 59 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCC-CCCHHHHHHHHHHHHhcC
Confidence 3444689999999999999888889999998653 345678999999998775
No 28
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=95.95 E-value=0.0075 Score=56.25 Aligned_cols=56 Identities=23% Similarity=0.303 Sum_probs=44.1
Q ss_pred HHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 338 IATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 338 ~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
.+++.|...+.||+|+||.||+|... .++.+|+|++... .....++..|+.++.++
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~ 59 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKY 59 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHh
Confidence 45666777789999999999999875 4788999988653 34567788998887765
No 29
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.94 E-value=0.002 Score=68.22 Aligned_cols=50 Identities=24% Similarity=0.385 Sum_probs=41.5
Q ss_pred CceEcccCCccEEEEEeC------CCcEEEEEEecccccc-cHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKISEQ-GLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~~~-~~~ef~~Ev~~l~~l~ 395 (397)
.+.||+|.||.||+|... +.+.||||.|.+.... ..++|++|+++|++++
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~ 547 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ 547 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc
Confidence 368999999999999874 3568999999765544 6789999999999875
No 30
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=95.91 E-value=0.013 Score=54.56 Aligned_cols=55 Identities=18% Similarity=0.245 Sum_probs=41.8
Q ss_pred cCCCCCceEcccCCccEEEEEeCC----CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD----GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~----g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
++|...+.||+|+||.||+|.... ...||||++.... ....++|.+|+.++.+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~ 63 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD 63 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC
Confidence 456777899999999999998753 3578999886432 234567999999987764
No 31
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=95.78 E-value=0.014 Score=54.30 Aligned_cols=52 Identities=19% Similarity=0.325 Sum_probs=41.6
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
|....+||+|+||.||+|...+...||+|++.. .....++|..|++++.+++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~-~~~~~~~~~~E~~~l~~l~ 59 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLR 59 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEeccc-CccCHHHHHHHHHHHHhCC
Confidence 444568999999999999887777899999864 3345678999999887764
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=95.75 E-value=0.016 Score=55.24 Aligned_cols=53 Identities=21% Similarity=0.217 Sum_probs=39.3
Q ss_pred CCCCceEcccCCccEEEEEeCC-----------------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-----------------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-----------------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|...++||+|+||.||++...+ +..||||.+.... ....++|.+|++++.+++
T Consensus 7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (304)
T cd05096 7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK 77 (304)
T ss_pred CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC
Confidence 4445789999999999997643 3369999886532 234567999999988764
No 33
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=95.73 E-value=0.01 Score=55.60 Aligned_cols=53 Identities=23% Similarity=0.376 Sum_probs=40.9
Q ss_pred CCCCceEcccCCccEEEEEeCC------CcEEEEEEecccccc-cHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKISEQ-GLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~~~-~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|+||.||+|...+ +..+|||++...... ..++|..|++++.+++
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~ 66 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ 66 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC
Confidence 4445789999999999998743 478999998654333 4578999999988765
No 34
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=95.73 E-value=0.011 Score=55.76 Aligned_cols=63 Identities=19% Similarity=0.306 Sum_probs=49.2
Q ss_pred EeHHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 331 FELATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 331 ~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
+.++.+..++++|.....||+|+||.||++... .++.+|+|.+... .....++.+|+.++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l 71 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKAL 71 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHH
Confidence 555677788889998899999999999999875 4788999987542 22346688888877765
No 35
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=95.70 E-value=0.0042 Score=68.25 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=44.3
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
..++|.+-..||+||||.|||++-. ||+..||||+.... .........||++|++|.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn 535 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN 535 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC
Confidence 4467777789999999999999754 79999999995432 233345678999999874
No 36
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=95.66 E-value=0.016 Score=54.20 Aligned_cols=54 Identities=13% Similarity=0.269 Sum_probs=40.4
Q ss_pred CCCCCceEcccCCccEEEEEeC----CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA----DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~----~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||+|.+. .+..||+|.+.... ....+.|.+|+.++.+++
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~ 64 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD 64 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC
Confidence 3455578999999999999863 35689999986532 233467899999988764
No 37
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=95.66 E-value=0.017 Score=53.72 Aligned_cols=53 Identities=21% Similarity=0.302 Sum_probs=42.2
Q ss_pred CCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+...+.||+|+||.||++...++..+|+|.+... ....+.|.+|++++.+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~ 59 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQ 59 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcC
Confidence 35556799999999999999888888999987642 334567999999888765
No 38
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=95.65 E-value=0.017 Score=55.62 Aligned_cols=55 Identities=27% Similarity=0.544 Sum_probs=41.0
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCc----EEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQ----EIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~----~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.+|...+.||+|+||.||+|+.. ++. .||||++.... ....++|..|+.++..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~ 67 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 67 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC
Confidence 34777789999999999999864 333 38999986432 334578999999887764
No 39
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=95.64 E-value=0.022 Score=52.63 Aligned_cols=53 Identities=21% Similarity=0.328 Sum_probs=42.4
Q ss_pred cCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
++|...+.||+|++|.||++... ++.||||++.... ...+++.+|+.++.+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~ 58 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDS-TAAQAFLAEASVMTTLR 58 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccch-hHHHHHHHHHHHHHhcC
Confidence 34556679999999999999875 7889999986533 35678999999888764
No 40
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=95.59 E-value=0.024 Score=52.66 Aligned_cols=54 Identities=20% Similarity=0.370 Sum_probs=41.7
Q ss_pred CCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||+|.. .+++.+|+|++........+.+.+|+.++.+++
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~ 64 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK 64 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcC
Confidence 455567999999999999986 468899999986543344566888998887654
No 41
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=95.56 E-value=0.008 Score=59.99 Aligned_cols=42 Identities=31% Similarity=0.474 Sum_probs=34.4
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
.+||+|+||.||||.|.+ +.||||++. .+..+.|.+|=.+.+
T Consensus 216 eli~~Grfg~V~KaqL~~-~~VAVKifp---~~~kqs~~~Ek~Iy~ 257 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDN-RLVAVKIFP---EQEKQSFQNEKNIYS 257 (534)
T ss_pred HHhhcCccceeehhhccC-ceeEEEecC---HHHHHHHHhHHHHHh
Confidence 488999999999999964 999999984 456677888876654
No 42
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=95.49 E-value=0.017 Score=55.90 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=34.1
Q ss_pred CCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 344 STNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 344 ~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
...+++|.|+||.||+|.+.. ++.||||+.....+.. -.|+++|+++
T Consensus 27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l 74 (364)
T KOG0658|consen 27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKL 74 (364)
T ss_pred EeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhc
Confidence 344799999999999998864 7899999985533222 2466666654
No 43
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=95.48 E-value=0.017 Score=61.37 Aligned_cols=49 Identities=29% Similarity=0.360 Sum_probs=44.3
Q ss_pred ceEcccCCccEEEEEeCCC-cEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLADG-QEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g-~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|-+|||+.||.+....+ ..+|+||+-..++++.+..++||++|.+|+
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~ 92 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS 92 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc
Confidence 6899999999999998776 999999997777888999999999999876
No 44
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=95.47 E-value=0.013 Score=59.03 Aligned_cols=48 Identities=19% Similarity=0.318 Sum_probs=42.1
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.||+|.||.|+.|.......||||.+... ....+.|..|+++|.+|+
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~ 259 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLR 259 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCc
Confidence 579999999999999988889999998664 456788999999999886
No 45
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.44 E-value=0.0079 Score=55.16 Aligned_cols=57 Identities=23% Similarity=0.305 Sum_probs=44.5
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.++|...+.||+|.||.||.|... ++-.||+|.+.+. ..+-..++.+|+++.+.|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~ 80 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR 80 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC
Confidence 3456777889999999999999875 4778999999652 2334567889998888775
No 46
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=95.40 E-value=0.021 Score=53.75 Aligned_cols=53 Identities=26% Similarity=0.402 Sum_probs=40.2
Q ss_pred CCCCceEcccCCccEEEEEe-----CCCcEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTL-----ADGQEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l-----~~g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|+||.||+|.. ..+..+|+|++... ..+..++|.+|++++.+++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~ 65 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH 65 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC
Confidence 44457899999999999975 24678999998642 2334567999999988775
No 47
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=95.38 E-value=0.032 Score=54.43 Aligned_cols=55 Identities=20% Similarity=0.355 Sum_probs=42.3
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|...+.||+|+||.||+|+.. .++.+|||++... .....+.+..|++++.+++
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~ 72 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ 72 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC
Confidence 66777789999999999999864 5899999988542 1223456888998887664
No 48
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.28 E-value=0.005 Score=57.77 Aligned_cols=49 Identities=27% Similarity=0.444 Sum_probs=39.8
Q ss_pred ceEcccCCccEEEE-EeCCCcEEEEEEecc--cccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKG-TLADGQEIVVKRFSK--ISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg-~l~~g~~vaVK~l~~--~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+||+|.||.|||+ .+.+|..+|.|++.- .+.+..+....|+.+|..|+
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~ 76 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN 76 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC
Confidence 58999999999998 678999999998853 33455667889999988765
No 49
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=95.26 E-value=0.028 Score=52.24 Aligned_cols=55 Identities=20% Similarity=0.344 Sum_probs=41.5
Q ss_pred cCCCCCceEcccCCccEEEEEeCC-C---cEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD-G---QEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~-g---~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
++|...+.||+|+||.||+|.... + ..+|||++.... ....++|..|++++.+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~ 64 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS 64 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC
Confidence 456667899999999999998853 3 378999886432 233567999999988764
No 50
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=95.21 E-value=0.023 Score=55.52 Aligned_cols=53 Identities=21% Similarity=0.293 Sum_probs=39.7
Q ss_pred CCCCCceEcccCCccEEEEEe------CCCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTL------ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l------~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
.|...+.||+|+||.||++.- ..++.||||++.... ......+..|+.++.++
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 67 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 67 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhc
Confidence 455567899999999999962 357899999986432 22345688899988776
No 51
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=95.20 E-value=0.017 Score=56.06 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=39.7
Q ss_pred cCCCCCceEcccCCccEEEEEe------CCCcEEEEEEeccccc-ccHHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTL------ADGQEIVVKRFSKISE-QGLKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l------~~g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l 394 (397)
+.|...++||+|+||.||++.. ..+..||||++..... ...+.|..|+.++.++
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 67 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHI 67 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHh
Confidence 4455567899999999999974 2356899999864322 2346788999988766
No 52
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=95.19 E-value=0.037 Score=52.44 Aligned_cols=54 Identities=22% Similarity=0.248 Sum_probs=41.1
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.|...+.||+|+||.||++... +++.||+|++.... ......+.+|++++.+++
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK 61 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC
Confidence 3555679999999999999875 58899999885422 233456788999988765
No 53
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=95.14 E-value=0.028 Score=52.70 Aligned_cols=55 Identities=27% Similarity=0.408 Sum_probs=41.8
Q ss_pred cCCCCCceEcccCCccEEEEEeCC-----CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD-----GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~-----g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|...++||+|+||.||+|...+ +..|++|++.... ....+.+.+|+.++.+++
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~ 66 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS 66 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC
Confidence 345556799999999999998865 6889999886432 233567889998887764
No 54
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=95.13 E-value=0.027 Score=55.18 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=38.9
Q ss_pred ceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
++||+|+||.||++... +++.||||++.... ....++|.+|++++.+++
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 130 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN 130 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC
Confidence 68999999999999865 68999999985432 233567899999998764
No 55
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=95.11 E-value=0.033 Score=59.36 Aligned_cols=50 Identities=28% Similarity=0.507 Sum_probs=39.4
Q ss_pred CceEcccCCccEEEEEe-CCC----cEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTL-ADG----QEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l-~~g----~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
..+||+|.||+||||.. |.| .+||+|.+.... .+..+||..|+-+|+++.
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masld 756 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLD 756 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCC
Confidence 35899999999999954 654 478999986643 345789999999988774
No 56
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=95.10 E-value=0.037 Score=51.36 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=41.1
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.....||+|++|.||++...++..+|+|++... ....+.|.+|++++.+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~ 59 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLR 59 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCC
Confidence 3444689999999999999887778999987542 344577999999988764
No 57
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=95.08 E-value=0.036 Score=54.12 Aligned_cols=63 Identities=19% Similarity=0.188 Sum_probs=48.4
Q ss_pred HHHHHHHhcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 333 LATIAIATDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 333 ~~~l~~at~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
..++..+++.|.....||+|+||.||++.. .+++.||||++.... ....+.+.+|++++.+++
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~ 74 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 74 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC
Confidence 345666778888888999999999999975 468899999986421 223466888998888765
No 58
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=95.07 E-value=0.043 Score=52.01 Aligned_cols=58 Identities=21% Similarity=0.238 Sum_probs=44.2
Q ss_pred HHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 338 IATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 338 ~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.++|...+.||+|+||.||+|... +++.+|||++.... ......+.+|++++.+++
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~ 64 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN 64 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC
Confidence 34566777789999999999999986 48899999985432 223456788998888765
No 59
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.05 E-value=0.036 Score=52.98 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=40.6
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.|...+.||+|+||.||+|... .+..+|+|++.... ......+..|++++.+++
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 62 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK 62 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC
Confidence 3555578999999999999875 57889999886432 233456788999888764
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=95.04 E-value=0.03 Score=54.37 Aligned_cols=54 Identities=19% Similarity=0.290 Sum_probs=41.4
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc---cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS---EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||++... +++.+|||.+.... ....+.+.+|++++.+++
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~ 76 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS 76 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC
Confidence 4555578999999999999886 48899999885421 233567889999988764
No 61
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=95.01 E-value=0.042 Score=51.34 Aligned_cols=50 Identities=24% Similarity=0.338 Sum_probs=39.4
Q ss_pred CceEcccCCccEEEEEeC-----CCcEEEEEEecccccc-cHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTLA-----DGQEIVVKRFSKISEQ-GLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~-----~g~~vaVK~l~~~~~~-~~~ef~~Ev~~l~~l~ 395 (397)
.+.||+|+||.||++... .+..+|||.+...... ..++|.+|++++.+++
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~ 64 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD 64 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC
Confidence 368999999999999864 3678999998653322 4678999999888764
No 62
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=94.98 E-value=0.029 Score=55.66 Aligned_cols=53 Identities=23% Similarity=0.244 Sum_probs=38.7
Q ss_pred CCCCCceEcccCCccEEEEEe------CCCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTL------ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l------~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
+|...+.||+|+||.||+++. ..+..||||++.... ....+.+.+|++++..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l 95 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 95 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHh
Confidence 344457999999999999963 235689999986432 23346788999988765
No 63
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=94.98 E-value=0.024 Score=53.51 Aligned_cols=63 Identities=27% Similarity=0.390 Sum_probs=48.6
Q ss_pred EeHHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 331 FELATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 331 ~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
+.+.++..++++|...+.||+|+||.||++... +++.+|+|.+... ....+++.+|+.++.++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l 75 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSL 75 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHh
Confidence 455667778899998899999999999999874 5889999988542 22345677788777665
No 64
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=94.97 E-value=0.029 Score=52.99 Aligned_cols=54 Identities=26% Similarity=0.378 Sum_probs=41.7
Q ss_pred CCCCCceEcccCCccEEEEEeC------CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||++... ++..+|+|.+........+.|.+|++++.+++
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~ 65 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC
Confidence 4555678999999999999752 34568999887655555678999999998764
No 65
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=94.96 E-value=0.048 Score=53.06 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=42.3
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.|.....||+|+||.||++... .++.||||++.... ....+++.+|++++.+++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~ 72 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK 72 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC
Confidence 455666679999999999999764 57899999986421 223456778999888764
No 66
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=94.96 E-value=0.04 Score=55.34 Aligned_cols=54 Identities=20% Similarity=0.263 Sum_probs=39.4
Q ss_pred CCCCCceEcccCCccEEEEEeCC------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.|...+.||+|+||.||+|+... +..||||++.... ....+.|.+|+++|.+++
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~ 98 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG 98 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC
Confidence 34444689999999999998531 3479999996432 233467999999998774
No 67
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=94.96 E-value=0.036 Score=51.75 Aligned_cols=55 Identities=20% Similarity=0.298 Sum_probs=41.7
Q ss_pred cCCCCCceEcccCCccEEEEEeC------CCcEEEEEEecccccc-cHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKISEQ-GLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~~~-~~~ef~~Ev~~l~~l~ 395 (397)
.+|.....||+|+||.||++... +.+.+++|.+...... ..++|.+|++++.+++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~ 66 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS 66 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC
Confidence 34666678999999999999864 2467899988653332 3578999999998874
No 68
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=94.95 E-value=0.039 Score=51.76 Aligned_cols=63 Identities=24% Similarity=0.337 Sum_probs=48.5
Q ss_pred EeHHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 331 FELATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 331 ~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
.++.++..+.+.|.....||.|+||.||+|... .++.+|+|.+... .....++..|+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~ 69 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKY 69 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHh
Confidence 355666667788888889999999999999874 5788999987543 33446788888877765
No 69
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=94.93 E-value=0.03 Score=61.60 Aligned_cols=49 Identities=33% Similarity=0.641 Sum_probs=40.1
Q ss_pred ceEcccCCccEEEEEeCC--Cc----EEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLAD--GQ----EIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~--g~----~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+.||+|.||.||+|.+.+ +. .||||+|.+.. .+..++|..|..+|+++.
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~ 753 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFD 753 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCC
Confidence 589999999999999865 33 38999997653 566789999999999864
No 70
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=94.90 E-value=0.046 Score=53.30 Aligned_cols=55 Identities=16% Similarity=0.188 Sum_probs=43.3
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..|...+.||+|+||.||+|... .++.||+|++........+.+.+|++++.+++
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~ 60 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD 60 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC
Confidence 34555678999999999999874 58899999986544455677889999888764
No 71
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=94.89 E-value=0.035 Score=52.36 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=42.8
Q ss_pred hcCCCCCceEcccCCccEEEEEeC------CCcEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
.++|.....||+|+||.||++..+ .+..+|+|++... .....++|..|++++.+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~ 66 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 66 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC
Confidence 356777789999999999999863 3678999988642 2334577999999988764
No 72
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=94.86 E-value=0.035 Score=51.57 Aligned_cols=52 Identities=23% Similarity=0.415 Sum_probs=41.2
Q ss_pred CCCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|++|.||++...+ +..+|+|++.. .....++|.+|++++.+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~-~~~~~~~~~~e~~~l~~l~ 60 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIK 60 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecC-CchHHHHHHHHHHHHHhCC
Confidence 4555789999999999998754 78899998865 3445678999999887764
No 73
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=94.83 E-value=0.047 Score=52.06 Aligned_cols=55 Identities=25% Similarity=0.329 Sum_probs=41.7
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccccc-ccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISE-QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l~ 395 (397)
++|...+.||+|+||.||++... +++.+|||++..... .....+.+|++++.+++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK 61 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC
Confidence 45666679999999999999875 588999999864322 22346778998887764
No 74
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.78 E-value=0.048 Score=56.07 Aligned_cols=53 Identities=23% Similarity=0.370 Sum_probs=42.6
Q ss_pred CCCCceEcccCCccEEEEEe-CCCcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
|.-.+.||+|||+.||+++- ..|..+|+|.+.+. .....+...+||+++.+|+
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~ 76 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK 76 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC
Confidence 55567999999999999976 77999999998652 2344567889999998875
No 75
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=94.76 E-value=0.038 Score=55.54 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=38.4
Q ss_pred CCceEcccCCccEEEEEeC------CCcEEEEEEeccccc-ccHHHHHHHHHHhhcCC
Q 038392 345 TNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKISE-QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l~ 395 (397)
..+.||+|+||.||++... .+..||||++..... ...+.|..|+++|.++.
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~ 98 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG 98 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC
Confidence 3468999999999999864 246899999965322 22457889999998764
No 76
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=94.76 E-value=0.022 Score=53.40 Aligned_cols=55 Identities=27% Similarity=0.321 Sum_probs=43.5
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
++|.....||.|++|.||++... ++..+|+|.+........+.|..|++++.+++
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~ 60 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK 60 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC
Confidence 34555568999999999999875 58899999986544455678999999998875
No 77
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=94.75 E-value=0.037 Score=53.73 Aligned_cols=61 Identities=20% Similarity=0.233 Sum_probs=46.8
Q ss_pred HHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 335 TIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 335 ~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
++..+++.|...+.||+|+||.||++.-. ++..+|||++... .....+.+..|++++.+++
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 67 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR 67 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC
Confidence 34456778888889999999999999754 6889999988532 2234567888999888764
No 78
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=94.74 E-value=0.039 Score=52.13 Aligned_cols=57 Identities=28% Similarity=0.310 Sum_probs=42.9
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+++.|.....||+|+||.||+|... +++.+|+|++.... ......+.+|++++.+++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~ 61 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK 61 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC
Confidence 3556777789999999999999764 58899999985432 233456778988887664
No 79
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.70 E-value=0.059 Score=51.31 Aligned_cols=55 Identities=24% Similarity=0.409 Sum_probs=43.2
Q ss_pred cCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..|...+.||+|++|.||++.. .+++.+|+|.+........+.+.+|+.++.+++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~ 74 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK 74 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCC
Confidence 4566667899999999999986 468999999986544445567888988887654
No 80
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=94.69 E-value=0.038 Score=51.44 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=39.7
Q ss_pred CCCCceEcccCCccEEEEEeCC-C---cEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-G---QEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-g---~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
+...+.||+|+||.||+|.... + ..+|||.+... .....++|..|++++.+++
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~ 63 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 63 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC
Confidence 3345789999999999998753 3 36999998643 2334578999999887764
No 81
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=94.64 E-value=0.055 Score=52.51 Aligned_cols=56 Identities=18% Similarity=0.250 Sum_probs=43.2
Q ss_pred hcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
++.|...+.||+|+||.||+|.. .+++.||||++.... ......+..|++++.+++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK 61 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC
Confidence 35677778999999999999975 468999999986422 234566888999988765
No 82
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=94.59 E-value=0.057 Score=52.35 Aligned_cols=55 Identities=18% Similarity=0.109 Sum_probs=42.1
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
++|.....||+|+||.||++... .+..+|+|.+.... ....+.|.+|++++.+++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 61 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC
Confidence 45666678999999999999875 47889999885422 233467999999998764
No 83
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=94.57 E-value=0.046 Score=51.29 Aligned_cols=56 Identities=23% Similarity=0.385 Sum_probs=42.1
Q ss_pred hcCCCCCceEcccCCccEEEEEeCC------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+++|...+.||+|++|.||++...+ +..+|+|...... .....+|..|+.++.+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~ 67 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN 67 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC
Confidence 4567767899999999999998854 4678888875432 334567999999888764
No 84
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=94.54 E-value=0.049 Score=51.05 Aligned_cols=57 Identities=21% Similarity=0.371 Sum_probs=42.4
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC------CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
++++|...+.||+|+||.||+|... .+..+|||++.... .....+|.+|+.++.+++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~ 67 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 67 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC
Confidence 4566777789999999999998753 24679999885422 234567899999887764
No 85
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=94.54 E-value=0.055 Score=51.15 Aligned_cols=53 Identities=25% Similarity=0.339 Sum_probs=42.0
Q ss_pred CCCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||.|+||.||+|.... +..+|+|.+........++|..|++++.+++
T Consensus 14 y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~ 67 (292)
T cd06644 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN 67 (292)
T ss_pred hhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC
Confidence 4444689999999999998754 8899999987655555678899998887764
No 86
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=94.52 E-value=0.032 Score=55.26 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=42.7
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
..++|...+.||+|+||.||++... .++.+|+|++... .....+.|..|+.++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~ 101 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN 101 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC
Confidence 3456776789999999999999875 5889999998542 1233455788998887664
No 87
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=94.50 E-value=0.051 Score=50.61 Aligned_cols=53 Identities=19% Similarity=0.344 Sum_probs=39.6
Q ss_pred CCCCceEcccCCccEEEEEeCC----CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD----GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~----g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|+||.||+|...+ ...+|||+..... ....+.|.+|++++.+++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~ 65 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD 65 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC
Confidence 4445799999999999998644 2468899875533 344568999999988764
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=94.49 E-value=0.061 Score=52.26 Aligned_cols=55 Identities=18% Similarity=0.174 Sum_probs=42.0
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
++|....+||+|+||.||++... .+..+|+|.+... .....++|.+|++++.+++
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 61 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC
Confidence 45666679999999999999876 4778899887542 2233467899999988764
No 89
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=94.46 E-value=0.04 Score=56.94 Aligned_cols=58 Identities=21% Similarity=0.247 Sum_probs=43.1
Q ss_pred HHhcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 338 IATDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 338 ~at~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
...+.|...+.||+|+||.||++.. .+++.+|||++... .......+.+|+..+.+++
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~ 89 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD 89 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC
Confidence 3445666668999999999999975 56899999998542 2334567888988887653
No 90
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.43 E-value=0.056 Score=53.59 Aligned_cols=53 Identities=17% Similarity=0.340 Sum_probs=38.7
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||+|.||.||||.-. .++.||+|.+.... .-..++...|+.+|+..+
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~ 69 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD 69 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC
Confidence 444568999999999999864 48899999985421 223455677888887654
No 91
>PTZ00036 glycogen synthase kinase; Provisional
Probab=94.43 E-value=0.046 Score=55.54 Aligned_cols=52 Identities=15% Similarity=0.351 Sum_probs=38.7
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
...|...++||+|+||.||+|... .++.||||++.... .....|+.+|.+++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~ 117 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLN 117 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcC
Confidence 355777789999999999999875 58899999885421 22346888887664
No 92
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=94.41 E-value=0.049 Score=54.02 Aligned_cols=53 Identities=23% Similarity=0.280 Sum_probs=38.8
Q ss_pred CCCCCceEcccCCccEEEEEe------CCCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTL------ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l------~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
+|...+.||+|+||.||+++. .++..||||++.... ....+.+..|++++.++
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l 98 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHL 98 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhh
Confidence 455557999999999999863 234589999986432 22345688999998776
No 93
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=94.40 E-value=0.054 Score=50.20 Aligned_cols=56 Identities=30% Similarity=0.421 Sum_probs=44.9
Q ss_pred HHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 338 IATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 338 ~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
.+++.|.....||+|++|.||++... +++.+++|.+... ....++|..|+.++.++
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~~ 59 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKY 59 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecC-chhHHHHHHHHHHHHHh
Confidence 45677887889999999999999885 4788999988653 33456799999888876
No 94
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=94.40 E-value=0.05 Score=51.18 Aligned_cols=52 Identities=23% Similarity=0.298 Sum_probs=40.4
Q ss_pred CCCceEcccCCccEEEEEeC------CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 344 STNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 344 ~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.-..+||+|+||.||++..+ ++..+|+|.+........+.|.+|++++.+++
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~ 65 (280)
T cd05092 8 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ 65 (280)
T ss_pred eeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC
Confidence 33468999999999999642 35688999887655555678999999988765
No 95
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=94.38 E-value=0.058 Score=52.16 Aligned_cols=53 Identities=26% Similarity=0.340 Sum_probs=42.1
Q ss_pred CCCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.-.+.||+|.||.||.+...+ |...|||..........+.+..|+++|.+++
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~ 72 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN 72 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC
Confidence 4445789999999999998865 8899999886543223667899999999886
No 96
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=94.32 E-value=0.061 Score=50.64 Aligned_cols=57 Identities=25% Similarity=0.382 Sum_probs=45.5
Q ss_pred HHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 338 IATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 338 ~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+++.|...+.||+|++|.||++... ++..+++|.+..... ..+++.+|++++.+++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~ 73 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCK 73 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCC
Confidence 45666777789999999999999886 588999999865332 5678899999887764
No 97
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=94.31 E-value=0.077 Score=51.74 Aligned_cols=57 Identities=21% Similarity=0.301 Sum_probs=43.3
Q ss_pred HhcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
..+.|...+.||+|+||.||++.. .++..||||++... .....+.+.+|++++.+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~ 72 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK 72 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC
Confidence 445677778999999999999975 46889999988542 1223456889999988764
No 98
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=94.24 E-value=0.071 Score=50.91 Aligned_cols=55 Identities=16% Similarity=0.323 Sum_probs=41.6
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc---cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS---EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l~ 395 (397)
..|...+.||+|+||.||+|... +++.+|+|++.... ....+++.+|++++.+++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~ 73 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR 73 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC
Confidence 34556678999999999999875 58899999885322 223457889999888765
No 99
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=94.21 E-value=0.076 Score=50.50 Aligned_cols=48 Identities=27% Similarity=0.329 Sum_probs=38.5
Q ss_pred eEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 348 KLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 348 ~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+||+|+||.||++... ++..+|||++........+.|.+|+.++.+++
T Consensus 27 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~ 75 (292)
T cd06657 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 75 (292)
T ss_pred HcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC
Confidence 7899999999999874 68899999986544445567889998887654
No 100
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=94.17 E-value=0.077 Score=51.01 Aligned_cols=53 Identities=19% Similarity=0.357 Sum_probs=40.5
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEeccccc---ccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISE---QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~---~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|+||.||++... ++..+|+|++..... ...+++..|++++.+++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~ 83 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK 83 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC
Confidence 555678999999999999865 588999999864322 23457888999988764
No 101
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=94.13 E-value=0.097 Score=49.70 Aligned_cols=55 Identities=24% Similarity=0.409 Sum_probs=42.3
Q ss_pred cCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..|...+.||+|+||.||++.- .++..+|+|.+........+.+.+|+.++.+++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~ 74 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK 74 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC
Confidence 4555567899999999999975 467899999986433344567889998887764
No 102
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=94.11 E-value=0.08 Score=49.73 Aligned_cols=49 Identities=27% Similarity=0.353 Sum_probs=39.5
Q ss_pred ceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..||+|+||.||++.... +..+++|.+........+.|.+|++++.+++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~ 60 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD 60 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC
Confidence 579999999999998864 7788999886554555678999999887664
No 103
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=94.10 E-value=0.092 Score=49.92 Aligned_cols=53 Identities=23% Similarity=0.257 Sum_probs=40.0
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||+|+||.||++... .++.||+|.+.... ......+.+|++++.+++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 62 (301)
T cd07873 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK 62 (301)
T ss_pred eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC
Confidence 445578999999999999875 47899999885422 233456788999888764
No 104
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=94.09 E-value=0.075 Score=49.82 Aligned_cols=54 Identities=30% Similarity=0.515 Sum_probs=39.0
Q ss_pred CCCCCceEcccCCccEEEEEe-CCCc----EEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTL-ADGQ----EIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l-~~g~----~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|...++||+|+||.||+|.. +++. .||+|.+... .....+++.+|+.++.+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~ 67 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 67 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcC
Confidence 455567999999999999974 4554 4799988542 2334567888988877653
No 105
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=94.07 E-value=0.1 Score=48.96 Aligned_cols=53 Identities=21% Similarity=0.416 Sum_probs=39.6
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||+|+||.||+|... ++..+|||.+.... ....+.|.+|+.++.+++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~ 60 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC
Confidence 344468999999999999764 68899999875322 233467889998887764
No 106
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=94.03 E-value=0.11 Score=58.23 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=38.4
Q ss_pred HhcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
....+.+.++||+|+||.||+|.. .++..||||++....... ..|++++.+++
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~l~~l~ 741 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQ 741 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc----HHHHHHHhhCC
Confidence 345577778999999999999987 578999999986532222 23466666553
No 107
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.02 E-value=0.086 Score=51.69 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=42.8
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.|.....||+|+||.||++.-. .+..+|||++... .....+++.+|+.++.+++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~ 78 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 78 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC
Confidence 356766789999999999999764 5889999998542 2234567888998887664
No 108
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=93.98 E-value=0.08 Score=49.99 Aligned_cols=55 Identities=24% Similarity=0.365 Sum_probs=39.4
Q ss_pred cCCCCCceEcccCCccEEEEEeCC------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
..|.....||+|+||.||+|...+ +..+|||.+.... .....+|.+|+.++.+++
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~ 67 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 67 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC
Confidence 445666799999999999997542 4579999875432 123456888988887664
No 109
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=93.97 E-value=0.048 Score=51.07 Aligned_cols=49 Identities=20% Similarity=0.427 Sum_probs=38.0
Q ss_pred ceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+.||+|+||.||+|... .+..||+|.+.... ....+++.+|++++.+++
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~ 60 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCC
Confidence 57899999999999875 47789999875322 234567899999988764
No 110
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=93.96 E-value=0.091 Score=49.61 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=40.5
Q ss_pred CCCCCceEcccCCccEEEEEeCC-----------------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD-----------------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~-----------------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.|.....||+|+||.||++...+ +..||+|++.... ....++|.+|++++.+++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~ 77 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS 77 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC
Confidence 45556799999999999987653 2458999886432 334678999999998775
No 111
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=93.94 E-value=0.089 Score=49.57 Aligned_cols=55 Identities=25% Similarity=0.329 Sum_probs=41.0
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|.....||+|++|.||+|... +++.+|||.+.... ......+.+|++++.+++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK 61 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC
Confidence 34555678999999999999876 58899999985432 222355778999888764
No 112
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=93.93 E-value=0.071 Score=52.82 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=42.9
Q ss_pred HHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 337 AIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 337 ~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
....++|...+.||+|+||.||++... .++.+|+|.+... .....+.+..|+.++..++
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~ 101 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 101 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC
Confidence 334466777789999999999999875 4788999988542 1223455778888877653
No 113
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=93.93 E-value=0.081 Score=49.65 Aligned_cols=49 Identities=31% Similarity=0.474 Sum_probs=37.2
Q ss_pred ceEcccCCccEEEEEeCC------CcEEEEEEecccccc-cHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLAD------GQEIVVKRFSKISEQ-GLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~~~-~~~ef~~Ev~~l~~l~ 395 (397)
+.||+|+||.||+|...+ +..||||++...... ..++|..|+.++.+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~ 66 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ 66 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC
Confidence 579999999999998642 478999998653322 2466889998887764
No 114
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=93.83 E-value=0.09 Score=49.46 Aligned_cols=53 Identities=26% Similarity=0.342 Sum_probs=40.2
Q ss_pred CCCCceEcccCCccEEEEEe-----CCCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTL-----ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l-----~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||+|+||.||.+.. ..+..+|+|.+.... ....+.|.+|++++.+++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~ 64 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 64 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC
Confidence 44456899999999999975 347889999986432 334567999999988765
No 115
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=93.81 E-value=0.059 Score=51.89 Aligned_cols=50 Identities=24% Similarity=0.250 Sum_probs=36.5
Q ss_pred CceEcccCCccEEEEEeC-CCcEEEEEEeccccc--ccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISE--QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~--~~~~ef~~Ev~~l~~l~ 395 (397)
.++||+|.||.||||+.. .|+.||+|++..... ....--..|+-+|.+++
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~ 68 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS 68 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC
Confidence 357999999999999764 689999999965332 12333467887777664
No 116
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=93.81 E-value=0.068 Score=50.68 Aligned_cols=54 Identities=20% Similarity=0.214 Sum_probs=39.1
Q ss_pred CCCCCceEcccCCccEEEEEeCC---------------CcEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD---------------GQEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~---------------g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|...+.||+|+||.||++.... ...+|||++... .....+.|.+|++++.+++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~ 75 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK 75 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 34555789999999999987542 125899988643 2233567999999998875
No 117
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=93.75 E-value=0.12 Score=49.12 Aligned_cols=55 Identities=22% Similarity=0.406 Sum_probs=42.2
Q ss_pred cCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..|.....||+|++|.||+|.- .+++.+|+|.+........+.+..|+.++..++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~ 75 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC
Confidence 3455556899999999999985 468899999986544445577889998887653
No 118
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=93.75 E-value=0.08 Score=51.76 Aligned_cols=54 Identities=22% Similarity=0.336 Sum_probs=40.0
Q ss_pred CCCCCceEcccCCccEEEEEeCC--CcEEEEEEecccc---cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD--GQEIVVKRFSKIS---EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~--g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l~ 395 (397)
+|.....||+|+||.||++.... +..+|||++.... ....+++.+|++++..++
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~ 89 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN 89 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC
Confidence 45555799999999999998654 3689999885421 233567888999888764
No 119
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=93.71 E-value=0.1 Score=49.87 Aligned_cols=56 Identities=18% Similarity=0.290 Sum_probs=41.4
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
..+|...+.||+|+||.||+|... .++.||+|++.... ......+.+|+.++.+++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 64 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR 64 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC
Confidence 456777789999999999999875 48899999885321 122345667888887764
No 120
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=93.68 E-value=0.12 Score=52.70 Aligned_cols=48 Identities=27% Similarity=0.337 Sum_probs=36.2
Q ss_pred cCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
..|.+ +.|+.|++|.||+|++.+|+.||||+.... -.+.+..++.+|.
T Consensus 118 ~~fd~-~plasaSigQVh~A~l~~G~~VaVKv~rp~---i~~~i~~Dl~~l~ 165 (437)
T TIGR01982 118 AEFEE-KPLAAASIAQVHRARLVDGKEVAVKVLRPG---IEKTIAADIALLY 165 (437)
T ss_pred hhCCC-cceeeeehhheEEEEecCCCEEEEEeeCCC---cHHHHHHHHHHHH
Confidence 44553 679999999999999999999999998543 2445656655544
No 121
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=93.68 E-value=0.075 Score=52.65 Aligned_cols=63 Identities=14% Similarity=0.165 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 333 LATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 333 ~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.++....++|...+.||+|+||.||++... .++.+|+|.+... .....+.+..|+.++..++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~ 101 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 101 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC
Confidence 3344555677888889999999999999876 4788999988532 1223445778888776553
No 122
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.67 E-value=0.075 Score=52.93 Aligned_cols=44 Identities=25% Similarity=0.456 Sum_probs=34.3
Q ss_pred CCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 345 TNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
..+.||+|.||.|++|..+ |..||||++.. ..++.+.+|.++..
T Consensus 215 L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYq 258 (513)
T KOG2052|consen 215 LQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQ 258 (513)
T ss_pred EEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHH
Confidence 3468999999999999985 78899999854 33556777776543
No 123
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=93.62 E-value=0.11 Score=48.36 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=39.2
Q ss_pred CCCCCceEcccCCccEEEEEeC----CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA----DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~----~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||+|... .+..+|+|.+.... ....+.|..|+.++.+++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~ 63 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD 63 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC
Confidence 3455579999999999999763 23478999885422 233568999999887764
No 124
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=93.61 E-value=0.062 Score=49.89 Aligned_cols=54 Identities=19% Similarity=0.366 Sum_probs=39.9
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||++... +++.+|+|.+..........+..|+.++.+++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~ 64 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK 64 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC
Confidence 3444468999999999999764 58899999886543344456788888877654
No 125
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=93.59 E-value=0.073 Score=55.88 Aligned_cols=49 Identities=27% Similarity=0.393 Sum_probs=39.3
Q ss_pred ceEcccCCccEEEEEe--CCCc--EEEEEEecccccc-cHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTL--ADGQ--EIVVKRFSKISEQ-GLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l--~~g~--~vaVK~l~~~~~~-~~~ef~~Ev~~l~~l~ 395 (397)
++||+|.||.|.+|.. ++|. .||||.|...... ....|..|+.+|-+|+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~ 169 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ 169 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc
Confidence 4899999999999966 4555 5799999764433 5688999999998886
No 126
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.59 E-value=0.064 Score=56.87 Aligned_cols=51 Identities=20% Similarity=0.270 Sum_probs=40.8
Q ss_pred CCceEcccCCccEEEEEeC--C--CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 345 TNKKLGEGGFGPVYKGTLA--D--GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l~--~--g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.+||.|.||.||+|.|+ . ...||||.|.... +.+..+|..|+.+|+.+.
T Consensus 633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 4578999999999999884 2 4578999997643 445678999999999764
No 127
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=93.58 E-value=0.076 Score=49.99 Aligned_cols=51 Identities=20% Similarity=0.111 Sum_probs=39.1
Q ss_pred CCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 345 TNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
..+.||+|+||.||++... +++.+|+|++.... ....+.|.+|++++..++
T Consensus 9 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~ 61 (284)
T cd06620 9 TISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR 61 (284)
T ss_pred HHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC
Confidence 3368999999999999764 58889999875432 334578999999987664
No 128
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=93.57 E-value=0.11 Score=49.57 Aligned_cols=49 Identities=24% Similarity=0.260 Sum_probs=39.0
Q ss_pred ceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..||+|+||.||++... +++.+|+|.+........+.+.+|+.++.+++
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~ 76 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 76 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCC
Confidence 47999999999999764 68899999986544455677889998887654
No 129
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=93.51 E-value=0.091 Score=49.67 Aligned_cols=53 Identities=23% Similarity=0.314 Sum_probs=40.4
Q ss_pred CCCCceEcccCCccEEEEEeC------CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
|.-.+.||+|+||.||++... ++..+++|++........+.|.+|++++.+++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~ 65 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 65 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC
Confidence 444578999999999999742 35678999886644445678999999988765
No 130
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=93.48 E-value=0.11 Score=48.78 Aligned_cols=54 Identities=24% Similarity=0.418 Sum_probs=39.5
Q ss_pred CCCCCceEcccCCccEEEEEeCC------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||+|.... ...||+|.+.... ....++|.+|++++.+++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~ 66 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ 66 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC
Confidence 34455789999999999998743 2578999885422 233567999999988764
No 131
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=93.48 E-value=0.14 Score=50.36 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=42.0
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.|.....||+|+||.||++.-. .++.+|||++... .....+++.+|+.++..++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 81 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC
Confidence 456666679999999999999764 5889999998642 1233467788888887654
No 132
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=93.47 E-value=0.097 Score=49.82 Aligned_cols=54 Identities=22% Similarity=0.390 Sum_probs=42.5
Q ss_pred CCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|.....||.|++|.||+|.- .+++.||+|.+........+.+.+|++++.+++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~ 74 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK 74 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC
Confidence 355567899999999999975 568999999986544445677889999887764
No 133
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=93.47 E-value=0.07 Score=51.74 Aligned_cols=55 Identities=25% Similarity=0.391 Sum_probs=42.5
Q ss_pred cCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccc---cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKIS---EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l~ 395 (397)
.+|...++||+|+||.||...-.+ ++..|+|.|.+.. ....+.-++|..+|.+++
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~ 83 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK 83 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC
Confidence 457777899999999999987655 8899999986532 223556788988888764
No 134
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=93.46 E-value=0.093 Score=49.77 Aligned_cols=55 Identities=20% Similarity=0.231 Sum_probs=39.9
Q ss_pred cCCCCCceEcccCCccEEEEEeC-----------------CCcEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-----------------DGQEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-----------------~g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|...+.||+|+||.||++... +...+|+|++... .....++|..|++++.+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK 77 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC
Confidence 34555678999999999987422 2446899998643 2334578999999988775
No 135
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=93.38 E-value=0.14 Score=48.72 Aligned_cols=49 Identities=27% Similarity=0.298 Sum_probs=38.9
Q ss_pred ceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..||+|+||.||++... .+..+|||++........+.+.+|+.++.+++
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~ 77 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH 77 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC
Confidence 37999999999999874 58899999986544455667889998887654
No 136
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=93.38 E-value=0.049 Score=52.43 Aligned_cols=53 Identities=17% Similarity=0.300 Sum_probs=37.5
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-ccc-HHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQG-LKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~-~~ef~~Ev~~l~~l~ 395 (397)
|...|.|++|.||.||+|.-. .+.+||+|++.-.. ..+ .---.+|+.+|.+++
T Consensus 78 fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~ 133 (419)
T KOG0663|consen 78 FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR 133 (419)
T ss_pred HHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC
Confidence 444578999999999999764 58899999995421 111 112467888887765
No 137
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=93.33 E-value=0.12 Score=49.26 Aligned_cols=54 Identities=22% Similarity=0.454 Sum_probs=39.1
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCc--EEEEEEeccc-ccccHHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQ--EIVVKRFSKI-SEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~--~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l 394 (397)
++|...+.||+|+||.||++... ++. .+|+|++... .....++|..|++++.++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l 64 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 64 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHh
Confidence 34555679999999999999875 343 4578777542 233456788999988776
No 138
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=93.24 E-value=0.064 Score=55.54 Aligned_cols=49 Identities=24% Similarity=0.399 Sum_probs=41.4
Q ss_pred CceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.++||.|.+|.||.|+... .-.||||.|... ....+||..|..+|..|+
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeik 321 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 321 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhc
Confidence 3799999999999999875 567999999763 466899999999998765
No 139
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=93.24 E-value=0.16 Score=45.46 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=28.4
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEecc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSK 375 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~ 375 (397)
+...+.||+|+||.||++..++|+.+|||++..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~ 49 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRL 49 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEec
Confidence 445578999999999999998899999998643
No 140
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=93.24 E-value=0.1 Score=52.14 Aligned_cols=49 Identities=22% Similarity=0.353 Sum_probs=40.4
Q ss_pred ceEcccCCccEEEEEeCC-CcEEEEEEecccccc---cHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQ---GLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~---~~~ef~~Ev~~l~~l~ 395 (397)
+.||+|.||.||+++-+. |+.+|+|.+.+.... ..+...+|+++|.+++
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~ 93 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS 93 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc
Confidence 589999999999998876 999999999654322 3467899999999875
No 141
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=93.23 E-value=0.14 Score=50.13 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=42.0
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
..+.|...+.||+|+||.||++.-. .++.+|||++.... ....+.+..|+.++..++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 74 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC
Confidence 3456776779999999999999754 48899999986422 223466778888877653
No 142
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=93.14 E-value=0.047 Score=45.06 Aligned_cols=48 Identities=23% Similarity=0.268 Sum_probs=35.5
Q ss_pred cCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
..|.+ +-|+.++.|.||+|++.+|+.||||..... -.+.+..++.+|.
T Consensus 12 ~~fd~-~PlasASiaQVh~a~l~~g~~VaVKV~rP~---i~~~i~~Dl~~l~ 59 (119)
T PF03109_consen 12 DEFDP-EPLASASIAQVHRARLKDGEEVAVKVQRPG---IEEQIEADLRILR 59 (119)
T ss_pred HHCCc-chhhheehhhheeeeecccchhhhhhcchH---HHHHHHHHHHHHH
Confidence 34553 679999999999999999999999987543 2344555555543
No 143
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=93.14 E-value=0.14 Score=48.56 Aligned_cols=56 Identities=23% Similarity=0.272 Sum_probs=41.5
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
+++|.....||+|++|.||++... +++.+|||++.... ......+.+|++++.+++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~ 65 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC
Confidence 456666778999999999999865 58899999885422 222345778888887664
No 144
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=93.12 E-value=0.097 Score=49.23 Aligned_cols=51 Identities=27% Similarity=0.311 Sum_probs=38.6
Q ss_pred CCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 345 TNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
....||+|+||.||++... .++.+|+|++.... ......+..|+.++.++.
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~ 60 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS 60 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc
Confidence 3468999999999999875 48899999986432 233567888998887663
No 145
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=93.09 E-value=0.18 Score=48.44 Aligned_cols=52 Identities=21% Similarity=0.313 Sum_probs=38.9
Q ss_pred CCCceEcccCCccEEEEEeC-CCcEEEEEEeccccc---ccHHHHHHHHHHhhcCC
Q 038392 344 STNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISE---QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 344 ~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~---~~~~ef~~Ev~~l~~l~ 395 (397)
...+.||+|+||.||+|+.. .+..+|+|++..... ...+++..|++++.+++
T Consensus 24 ~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~ 79 (313)
T cd06633 24 VGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK 79 (313)
T ss_pred hcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC
Confidence 33468999999999999875 588999999854222 22356888998888765
No 146
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=93.09 E-value=0.18 Score=48.91 Aligned_cols=55 Identities=15% Similarity=0.247 Sum_probs=42.1
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
.+|...+.||+|++|.||++... .+..+|+|++.... ....+.+..|+.++.+++
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~ 62 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK 62 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC
Confidence 56776789999999999999865 58999999986432 233566778988887664
No 147
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=93.03 E-value=0.13 Score=54.24 Aligned_cols=37 Identities=43% Similarity=0.758 Sum_probs=31.2
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCC-----CcEEEEEEecc
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLAD-----GQEIVVKRFSK 375 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~-----g~~vaVK~l~~ 375 (397)
..++|...+.||+|+||.||+|+..+ +..+|||++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 45678888899999999999998854 68999998754
No 148
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=92.99 E-value=0.14 Score=47.98 Aligned_cols=53 Identities=26% Similarity=0.488 Sum_probs=39.0
Q ss_pred CCCCceEcccCCccEEEEEeCC-Cc----EEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-GQ----EIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-g~----~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|+||.||+|...+ +. .+|+|.+.... ....++|.+|++++.+++
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~ 67 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD 67 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC
Confidence 3444689999999999998753 32 58899876532 234578999999988764
No 149
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=92.96 E-value=0.17 Score=49.18 Aligned_cols=55 Identities=13% Similarity=0.250 Sum_probs=40.8
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|.....||+|+||.||++.-. .+..||||++... .....+.+..|+.++.+++
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 62 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD 62 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC
Confidence 34666679999999999999764 5889999988642 2233456778888887653
No 150
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=92.95 E-value=0.15 Score=47.89 Aligned_cols=51 Identities=24% Similarity=0.254 Sum_probs=38.5
Q ss_pred CCceEcccCCccEEEEEe-----CCCcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 345 TNKKLGEGGFGPVYKGTL-----ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l-----~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
....||+|+||.||.+.. .++..+|+|.+.... ....+.|.+|++++.+++
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~ 64 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY 64 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC
Confidence 346899999999987643 357889999886432 234678999999998775
No 151
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=92.94 E-value=0.14 Score=47.97 Aligned_cols=53 Identities=21% Similarity=0.426 Sum_probs=40.1
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc-ccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI-SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||+|+||.||+|... .+..+|||.+... .....++|.+|++++.+++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~ 60 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC
Confidence 334468999999999999875 5889999987542 2344577899999888764
No 152
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=92.89 E-value=0.16 Score=48.49 Aligned_cols=54 Identities=24% Similarity=0.466 Sum_probs=38.3
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCc----EEEEEEeccccc-ccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQ----EIVVKRFSKISE-QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~----~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l~ 395 (397)
.|...+.||+|+||.||+|... ++. .+|+|.+..... ....+|.+|+.++.+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~ 67 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 67 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC
Confidence 3555578999999999999763 343 468888764322 22457889998887754
No 153
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=92.88 E-value=0.15 Score=47.55 Aligned_cols=54 Identities=20% Similarity=0.322 Sum_probs=39.9
Q ss_pred CCCCCceEcccCCccEEEEEeCC------CcEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|+||.||+|.... +..+|+|.+.... .....+|.+|++++.+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~ 67 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN 67 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC
Confidence 45555789999999999998743 3689999986432 233567889998887654
No 154
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=92.86 E-value=0.13 Score=52.30 Aligned_cols=54 Identities=22% Similarity=0.323 Sum_probs=41.0
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccc---cccHHHHHHHHHHhh
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKIS---EQGLKELKNDYFPNY 392 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~ 392 (397)
..++|....+||+|+||.||.++-.+ |..+|+|+|.+.. ....+..++|-.+|.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~ 196 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILA 196 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhh
Confidence 45678777899999999999998766 8999999997642 334455666666654
No 155
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=92.84 E-value=0.19 Score=47.56 Aligned_cols=55 Identities=20% Similarity=0.188 Sum_probs=40.6
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|.....||+|+||.||++... +++.+|||++.... ......+.+|++++.+++
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~ 69 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK 69 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC
Confidence 45666679999999999999875 58899999885321 222345678888887664
No 156
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=92.81 E-value=0.15 Score=48.18 Aligned_cols=54 Identities=15% Similarity=0.221 Sum_probs=40.1
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
+|...+.||+|++|.||+|... +++.+|+|++.... ......+.+|+.++.+++
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~ 62 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ 62 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC
Confidence 4555678999999999999886 48899999985422 222345678888887764
No 157
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=92.78 E-value=0.13 Score=49.16 Aligned_cols=54 Identities=24% Similarity=0.303 Sum_probs=40.2
Q ss_pred cCCCCCceEcccCCccEEEEEe------CCCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTL------ADGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l------~~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
++|...+.||+|+||.||++.. ..+..+|||++.... ....+.|.+|++++.++
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 95 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHL 95 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhc
Confidence 3566668999999999999864 125579999886432 23346799999999877
No 158
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=92.67 E-value=0.12 Score=50.46 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=37.4
Q ss_pred CCCCceEcccCCccEEEEEeC------CCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA------DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~------~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
|...+.||+|+||.||++... .++.||+|++.... ....+.+..|++++.++
T Consensus 9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l 67 (337)
T cd05054 9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHI 67 (337)
T ss_pred hhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhh
Confidence 445579999999999999642 24689999986422 22345677888888766
No 159
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=92.64 E-value=0.13 Score=48.55 Aligned_cols=54 Identities=28% Similarity=0.381 Sum_probs=39.6
Q ss_pred cCCCCCceEcccCCccEEEEEeCC------CcEEEEEEeccc-ccccHHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD------GQEIVVKRFSKI-SEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~------g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l 394 (397)
+.|...+.||+|+||.||++...+ ...+|+|++... ..+...++.+|++++.++
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l 72 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMI 72 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhh
Confidence 445556789999999999998642 357899988642 223446788999888765
No 160
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=92.58 E-value=0.13 Score=49.96 Aligned_cols=54 Identities=15% Similarity=0.252 Sum_probs=40.5
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l 394 (397)
+.|...+.||+|+||.||+|... .+..+|||++... .....+.+..|++++.++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l 63 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQEL 63 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHh
Confidence 44555678999999999999876 5789999988532 223345677899888776
No 161
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=92.58 E-value=0.2 Score=48.97 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=42.5
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.|.....||+|+||.||++.-. .++.+|||++... .....+++..|+.++.+++
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 73 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN 73 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC
Confidence 456777789999999999999764 6889999998532 2233456778998887664
No 162
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=92.56 E-value=0.26 Score=46.51 Aligned_cols=50 Identities=26% Similarity=0.282 Sum_probs=39.2
Q ss_pred CceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.||+|++|.||++.. .+++.+++|++........+.+.+|+.++.+++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~ 74 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ 74 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC
Confidence 46999999999999986 468899999986544445567888988877653
No 163
>PHA03212 serine/threonine kinase US3; Provisional
Probab=92.53 E-value=0.17 Score=50.61 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=39.0
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|...+.||+|+||.||++.-. .++.||+|+... +.+.+|++++.+++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~ 141 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAIN 141 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCC
Confidence 45777789999999999999764 588999997532 34678999988775
No 164
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=92.42 E-value=0.17 Score=52.40 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=36.5
Q ss_pred CceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
...||+|.||.|.|+.-. .++.||||++.+.. .-..+-..|+.+|..|+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln 240 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLN 240 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHh
Confidence 368999999999999654 58999999997642 22334456888887665
No 165
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=92.18 E-value=0.28 Score=46.48 Aligned_cols=53 Identities=21% Similarity=0.352 Sum_probs=38.3
Q ss_pred CCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
+|...+.||+|++|.||++...+ ++.+|||++.... ....+++..|+.++.+.
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~ 70 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS 70 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc
Confidence 44555799999999999999875 8899999986432 22345566677665544
No 166
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=92.12 E-value=0.23 Score=46.61 Aligned_cols=53 Identities=26% Similarity=0.422 Sum_probs=36.4
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCc----EEEEEEeccccc-ccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQ----EIVVKRFSKISE-QGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~----~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l 394 (397)
.|...+.||+|+||.||+|... ++. .+++|++..... ...+++..|+..+.++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l 66 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL 66 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC
Confidence 3455578999999999999863 344 477887754322 2346777887777665
No 167
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=92.08 E-value=0.21 Score=48.62 Aligned_cols=56 Identities=18% Similarity=0.297 Sum_probs=42.1
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
.++|.....||+|++|.||+|... +++.+|||++... .....+.+.+|+.++.+++
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~ 72 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD 72 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc
Confidence 456766789999999999999885 4789999988542 1223456778888887664
No 168
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=91.91 E-value=0.25 Score=47.75 Aligned_cols=49 Identities=22% Similarity=0.248 Sum_probs=36.2
Q ss_pred ceEcccCCccEEEEEeC-CCcEEEEEEeccccccc--------------HHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQG--------------LKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~--------------~~ef~~Ev~~l~~l~ 395 (397)
+.||+|+||.||++... .++.+|||++....... ...+..|++++.+++
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 78 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK 78 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC
Confidence 57999999999999865 58899999885421111 124778998887765
No 169
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.72 E-value=0.14 Score=52.95 Aligned_cols=53 Identities=21% Similarity=0.365 Sum_probs=39.9
Q ss_pred CCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHH---HHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLK---ELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~---ef~~Ev~~l~~l~ 395 (397)
|.+-+.||-|+||.||-+.- .+...||||+++-...|..+ ....||.+|.+++
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~ 84 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR 84 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc
Confidence 45556799999999999864 56789999999765555543 3567888887765
No 170
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=91.65 E-value=0.27 Score=52.78 Aligned_cols=55 Identities=22% Similarity=0.324 Sum_probs=40.6
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc---cccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS---EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l~ 395 (397)
+.|...++||+|+||.||++... .++.||||++.... ....+.+..|+.++..++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~ 62 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK 62 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC
Confidence 34555679999999999999876 58899999985421 222466888888876553
No 171
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.56 E-value=0.094 Score=52.65 Aligned_cols=48 Identities=25% Similarity=0.402 Sum_probs=35.5
Q ss_pred ceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHH--HHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKEL--KNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef--~~Ev~~l~~l~ 395 (397)
++||.|.||.||+|+- ..+..||||++.... ...+|. .+||..|.||-
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf-~s~ee~~nLREvksL~kln 66 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKF-YSWEECMNLREVKSLRKLN 66 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhh-ccHHHHHHHHHHHHHHhcC
Confidence 5899999999999965 458899999986532 223443 46888877764
No 172
>PHA03211 serine/threonine kinase US3; Provisional
Probab=91.32 E-value=0.23 Score=50.93 Aligned_cols=49 Identities=20% Similarity=0.159 Sum_probs=37.9
Q ss_pred cCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..|.....||+|+||.||++..+. ++.||||... ...+.+|+++|.+++
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~ 218 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLS 218 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCC
Confidence 356666799999999999998865 7889999642 234668898888764
No 173
>smart00090 RIO RIO-like kinase.
Probab=91.31 E-value=0.27 Score=45.66 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=28.1
Q ss_pred CCCCceEcccCCccEEEEE--eCCCcEEEEEEecc
Q 038392 343 FSTNKKLGEGGFGPVYKGT--LADGQEIVVKRFSK 375 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~--l~~g~~vaVK~l~~ 375 (397)
|.....||+|++|.||+|. ..+|+.||||.+..
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~ 64 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRT 64 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence 4445689999999999998 67899999998854
No 174
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=91.22 E-value=0.27 Score=46.98 Aligned_cols=53 Identities=21% Similarity=0.381 Sum_probs=39.2
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|++|.||+|... ++..+|+|++... .....+++..|++++.+++
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~ 73 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC
Confidence 444468999999999999875 5788999988532 1223456888998888764
No 175
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=91.08 E-value=0.11 Score=54.48 Aligned_cols=50 Identities=28% Similarity=0.451 Sum_probs=39.2
Q ss_pred CceEcccCCccEEEEEe-CCCcEEEEEEeccccc-ccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISE-QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l~ 395 (397)
...||+|+||.||+|+- ..|+.||||....... .-.+....|+++|.|+.
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn 69 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN 69 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC
Confidence 36899999999999985 4699999998865332 23456788999998875
No 176
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=90.85 E-value=0.3 Score=46.45 Aligned_cols=53 Identities=25% Similarity=0.322 Sum_probs=38.2
Q ss_pred CCCCCceEcccCCccEEEEEeC--------CCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA--------DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~--------~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
+|.....||+|+||.||++... ++..+|+|.+.... ....+++.+|+.++..+
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l 77 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 77 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhh
Confidence 3445578999999999999641 24578999885422 33456788999888765
No 177
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=90.70 E-value=0.049 Score=51.62 Aligned_cols=45 Identities=27% Similarity=0.432 Sum_probs=36.6
Q ss_pred CceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 346 NKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
..+||+|++|.|||+..+ .|+.+|||+.-. +...+|...|+.++.
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQ 83 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQ 83 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHH
Confidence 358999999999999875 599999999743 455778888887775
No 178
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=90.68 E-value=0.17 Score=47.43 Aligned_cols=47 Identities=26% Similarity=0.306 Sum_probs=35.0
Q ss_pred ceEcccCCccEEEEEe-CCCcEEEEEEeccccc-ccHHHHHHHHHHhhc
Q 038392 347 KKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISE-QGLKELKNDYFPNYN 393 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~ 393 (397)
..||.|.||+|+|-.. +.|+.+|||++..... ...+.|..|+.+..+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mk 118 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMK 118 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHh
Confidence 3689999999999877 5699999999965443 334567777765543
No 179
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=90.66 E-value=0.31 Score=46.43 Aligned_cols=53 Identities=25% Similarity=0.276 Sum_probs=38.2
Q ss_pred CCCCCceEcccCCccEEEEEeC--------CCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA--------DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~--------~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
.|...+.||+|+||.||++... ....+|+|.+.... ....+++..|++++.++
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l 80 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 80 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHh
Confidence 3555578999999999998742 23569999886432 23456788899888766
No 180
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=90.61 E-value=0.28 Score=51.05 Aligned_cols=50 Identities=28% Similarity=0.432 Sum_probs=37.4
Q ss_pred CceEcccCCccEEEEEeCC---C--cEEEEEEecccc-cccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTLAD---G--QEIVVKRFSKIS-EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~~---g--~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l~ 395 (397)
.++||+|.||.||+|+.-+ | ..||||...... ....+.|..|.-+|.+++
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfd 449 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFD 449 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCC
Confidence 3689999999999998733 2 357888876532 234678999999888764
No 181
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=90.49 E-value=0.38 Score=47.68 Aligned_cols=50 Identities=24% Similarity=0.294 Sum_probs=37.1
Q ss_pred CceEcccCCccEEEEEe-CCCcEEEEEEecccc--ccc---HHH--HHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKIS--EQG---LKE--LKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~--~~~---~~e--f~~Ev~~l~~l~ 395 (397)
.+.||+|+||.|-+|.- ..|+.||||++++.. .+. .+. ..+|+++|.+|+
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~ 234 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS 234 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC
Confidence 46899999999999965 469999999996521 111 122 358999999875
No 182
>PHA03209 serine/threonine kinase US3; Provisional
Probab=90.47 E-value=0.42 Score=46.89 Aligned_cols=51 Identities=22% Similarity=0.144 Sum_probs=37.3
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
...+|.....||+|+||.||++.... +..||+|..... ....|+.++.+++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~ 115 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVN 115 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCC
Confidence 34568888899999999999998764 678899875331 1345777777654
No 183
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=90.45 E-value=0.41 Score=49.89 Aligned_cols=35 Identities=34% Similarity=0.492 Sum_probs=30.2
Q ss_pred hcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecc
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSK 375 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~ 375 (397)
-..|+. ..|+.|++|.||++++.+ |+.||||.+..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP 154 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP 154 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence 345665 689999999999999988 99999999865
No 184
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.26 E-value=0.48 Score=49.65 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=40.0
Q ss_pred hcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccc---cccHHHHHHHHHHhh
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKIS---EQGLKELKNDYFPNY 392 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~ 392 (397)
..+|....+||+|.||.|+.+.+.. ++..|||.|.+.. ....+..+.|.+++.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~ 423 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFE 423 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHH
Confidence 3567666799999999999999864 7789999997643 333566777776654
No 185
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=90.03 E-value=0.3 Score=54.30 Aligned_cols=57 Identities=21% Similarity=0.208 Sum_probs=42.7
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
..+.|.....||+|+||.||++.... +..+|+|.+... .....+.|..|+.+|.+|+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~ 70 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK 70 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC
Confidence 34456666799999999999998754 678899887532 2334567899999998775
No 186
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=89.89 E-value=0.49 Score=45.26 Aligned_cols=53 Identities=23% Similarity=0.292 Sum_probs=38.0
Q ss_pred CCCCCceEcccCCccEEEEEeC--------CCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA--------DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~--------~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
.|...+.||+|+||.||++... ....+|+|++.... .....+|..|++++.++
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l 74 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLI 74 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhc
Confidence 3445579999999999998642 24578899876422 23456788999888765
No 187
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=89.49 E-value=0.46 Score=49.61 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=36.3
Q ss_pred hcCCCCCceEcccCCccEEEEEeCCCcEEEEEEeccccc-------ccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISE-------QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~-------~~~~ef~~Ev~~l~~l~ 395 (397)
...+...++||+|+||.||+|...+...++.++..+... ...+.+..|++++.+++
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 394 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR 394 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc
Confidence 334455689999999999999887654443333322111 12356889999888765
No 188
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=89.25 E-value=0.83 Score=44.53 Aligned_cols=57 Identities=19% Similarity=0.128 Sum_probs=41.8
Q ss_pred EeHHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc-cccHHHHHHHHHHhhcC
Q 038392 331 FELATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS-EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 331 ~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~-~~~~~ef~~Ev~~l~~l 394 (397)
++..+|+.. +.||+|..|+|||+... .++.+|+|.+.... ..-.++...|++++.+.
T Consensus 76 i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 76 ISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC 134 (364)
T ss_pred cCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC
Confidence 445555543 58999999999999885 58889999984332 23346778899988764
No 189
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=89.05 E-value=0.54 Score=48.31 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=39.1
Q ss_pred CCCCceEcccCCccEEEEEeC-C-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-D-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
|...+.||+|++|.||++.-. + +..||+|++..........+..|+++|.+++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~ 123 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD 123 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC
Confidence 334478999999999999653 3 5678888765433444567888999998775
No 190
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=88.61 E-value=0.25 Score=48.80 Aligned_cols=57 Identities=23% Similarity=0.399 Sum_probs=42.5
Q ss_pred HHHHhcCCCCCceEcccCCccEEEEEeCC----CcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 336 IAIATDNFSTNKKLGEGGFGPVYKGTLAD----GQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 336 l~~at~~f~~~~~lg~G~fG~Vykg~l~~----g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
+....+.|...++||+|.|++||++++.. .+.||+|.+... +......+|++.|..+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~ 91 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRL 91 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHh
Confidence 34455677788999999999999998743 678999998653 3344467788777654
No 191
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=88.35 E-value=0.19 Score=51.49 Aligned_cols=49 Identities=27% Similarity=0.311 Sum_probs=41.6
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEecc--cccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRFSK--ISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l~~--~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..||.||...|||....+.+.+|+|+... .+.+....|++|+..|.||+
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk 417 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLK 417 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc
Confidence 57999999999999999889999887743 24566788999999999886
No 192
>PHA03207 serine/threonine kinase US3; Provisional
Probab=88.17 E-value=0.61 Score=46.41 Aligned_cols=49 Identities=16% Similarity=0.132 Sum_probs=36.3
Q ss_pred CCCCCceEcccCCccEEEEEeCC---CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD---GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~---g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|.....||+|+||.||++...+ +..||||.+... +.+.+|+++|.+++
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~ 144 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTIS 144 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcC
Confidence 46666789999999999997643 568899987542 23567888887764
No 193
>PHA02882 putative serine/threonine kinase; Provisional
Probab=88.07 E-value=0.62 Score=44.18 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=23.5
Q ss_pred cCCCCCceEcccCCccEEEEEeCCC----cEEEEEE
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADG----QEIVVKR 372 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g----~~vaVK~ 372 (397)
+.|...++||+|+||.||+|...+. ..+|+|.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~ 47 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKI 47 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEe
Confidence 3455567999999999999987653 3455554
No 194
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.99 E-value=0.69 Score=47.42 Aligned_cols=52 Identities=31% Similarity=0.475 Sum_probs=39.5
Q ss_pred CCCCceEcccCCccEEEEE-eCCCcEEEEEEecccccccHHH-HHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGT-LADGQEIVVKRFSKISEQGLKE-LKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~-l~~g~~vaVK~l~~~~~~~~~e-f~~Ev~~l~~l~ 395 (397)
|..-.+||+|..|.||.+. ...++.||||+++.. .|..+| ..+|+.+|...+
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~-~Q~~keLilnEi~Vm~~~~ 328 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR-KQPKKELLLNEILVMRDLH 328 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEec-cCCchhhhHHHHHHHHhcc
Confidence 3333589999999999984 456899999999764 455555 579999987654
No 195
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=87.91 E-value=0.8 Score=44.25 Aligned_cols=52 Identities=23% Similarity=0.293 Sum_probs=37.1
Q ss_pred CCCCceEcccCCccEEEEEeCC--------CcEEEEEEeccc-ccccHHHHHHHHHHhhcC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD--------GQEIVVKRFSKI-SEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~--------g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~l 394 (397)
|...+.||+|+||.||++.-.. ...+|+|.+... .....++|..|++++.++
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l 74 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMI 74 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhh
Confidence 3444789999999999986421 236899987542 233457899999988766
No 196
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.54 E-value=0.8 Score=45.88 Aligned_cols=52 Identities=13% Similarity=0.213 Sum_probs=39.8
Q ss_pred CCCCceEcccCCccEEEE-EeCCCcEEEEEEeccccccc-HHHHHHHHHHhhcC
Q 038392 343 FSTNKKLGEGGFGPVYKG-TLADGQEIVVKRFSKISEQG-LKELKNDYFPNYNT 394 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg-~l~~g~~vaVK~l~~~~~~~-~~ef~~Ev~~l~~l 394 (397)
|.-..+||.|..+.||+| +.|-+..||||+++....+. .++...|++.|+-+
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~ 81 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI 81 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc
Confidence 334468999999999999 45778999999996533333 57888999888754
No 197
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.37 E-value=0.84 Score=45.39 Aligned_cols=56 Identities=16% Similarity=0.275 Sum_probs=40.3
Q ss_pred hcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc----cc-ccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI----SE-QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~----~~-~~~~ef~~Ev~~l~~l~ 395 (397)
...+...+.||+|.||.|+.|... .+..||||.+... .. ...+...+|+.++.+++
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~ 77 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR 77 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc
Confidence 345566679999999999999664 5899999976542 11 23445567888888765
No 198
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=87.09 E-value=0.56 Score=45.58 Aligned_cols=53 Identities=13% Similarity=0.256 Sum_probs=39.2
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l~ 395 (397)
|.....||+|.+|.|.++.-. +|..|||||+.+. ..-..+.-.+|+++|..+|
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~ 79 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR 79 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc
Confidence 333467999999999999764 5899999999632 2233566678888887765
No 199
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=86.41 E-value=1.1 Score=45.40 Aligned_cols=57 Identities=18% Similarity=0.291 Sum_probs=42.6
Q ss_pred HhcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccc--cc------------cHHHHHHHHHHhhcCC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKIS--EQ------------GLKELKNDYFPNYNTK 395 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~--~~------------~~~ef~~Ev~~l~~l~ 395 (397)
..|.|.....||+|.||.|-++.- .+++.+|||+|.+.. .+ ..+....|+++|.|++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 345566667899999999999865 468999999996531 01 1356789999999875
No 200
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=86.09 E-value=0.67 Score=44.94 Aligned_cols=54 Identities=28% Similarity=0.273 Sum_probs=36.9
Q ss_pred CCCCCceEcccCCccEEEEEeCCC--cEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLADG--QEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~g--~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.|....+||+|+||.||++.-... ..+|+|.-..........++.|+.++..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~ 74 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLE 74 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHh
Confidence 566678999999999999986543 366776654322222226778888877654
No 201
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=85.87 E-value=0.31 Score=48.23 Aligned_cols=48 Identities=25% Similarity=0.362 Sum_probs=38.2
Q ss_pred ceEcccCCccEEEEEe-CCCcEEEEEEecccc---cccHHHHHHHHHHhhcC
Q 038392 347 KKLGEGGFGPVYKGTL-ADGQEIVVKRFSKIS---EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l 394 (397)
+.||+|.+|.|-++.- ..|++||||.+.+.. .|..-..++|+++|+.|
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL 110 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL 110 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc
Confidence 4789999999999865 579999999886543 44455678999999865
No 202
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=85.84 E-value=0.62 Score=44.88 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=47.0
Q ss_pred eEeHHHHHHHhcCCCCCceEcccCCccEEEE-EeCCCcEEEEEEecccccccHHHHHHHHHHhhc
Q 038392 330 CFELATIAIATDNFSTNKKLGEGGFGPVYKG-TLADGQEIVVKRFSKISEQGLKELKNDYFPNYN 393 (397)
Q Consensus 330 ~~s~~~l~~at~~f~~~~~lg~G~fG~Vykg-~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~ 393 (397)
.-.|.++-..|. +.||+|+++.|-.. .+..+.+.|||++++...+..+...+||+++..
T Consensus 72 ~g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~ 131 (463)
T KOG0607|consen 72 SGKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQ 131 (463)
T ss_pred cchHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHH
Confidence 345778877776 68999999999876 456799999999988766666777789988753
No 203
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=85.72 E-value=0.95 Score=46.95 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=36.4
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
.-..|++ +-|+.++.|.||+|++++|+.||||...... .+.+..++.+|.
T Consensus 124 ~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi---~~~i~~DL~il~ 173 (517)
T COG0661 124 LFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGI---RERIEADLKLLR 173 (517)
T ss_pred HHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCCh---HHHHHHHHHHHH
Confidence 3345654 6789999999999999999999999986543 333445554443
No 204
>PHA03210 serine/threonine kinase US3; Provisional
Probab=85.63 E-value=0.37 Score=49.84 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=35.1
Q ss_pred hcCCCCCceEcccCCccEEEEEeCC--CcEEEEE------------------EecccccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLAD--GQEIVVK------------------RFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~--g~~vaVK------------------~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
...|.....||+|+||.||++.+.. +...++| ++.. .....+.|.+|+++|.+++
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~ 221 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLN 221 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCC
Confidence 4567777899999999999987643 1111211 1111 1223456889999998764
No 205
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=85.48 E-value=0.64 Score=43.23 Aligned_cols=50 Identities=24% Similarity=0.298 Sum_probs=39.9
Q ss_pred CceEcccCCccEEEEE-eCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 346 NKKLGEGGFGPVYKGT-LADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~-l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
...||+|||..||.++ +.++...|+|++.-...+..++-..|+....++.
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~ 76 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN 76 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC
Confidence 3689999999999886 6678999999986655566777888888776653
No 206
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=85.12 E-value=0.72 Score=42.39 Aligned_cols=33 Identities=27% Similarity=0.468 Sum_probs=27.9
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEecc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSK 375 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~ 375 (397)
|.....||+|+||.||++...++..+|+|.+..
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~ 38 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINE 38 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEeccc
Confidence 444568999999999999998888899998754
No 207
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=84.52 E-value=0.28 Score=49.22 Aligned_cols=56 Identities=23% Similarity=0.351 Sum_probs=43.1
Q ss_pred hcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEeccc---ccccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKI---SEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~l~ 395 (397)
.+.|..-++||+||||.||-....+ |+..|.|+|++. ..+++.--.+|-++|.++.
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~ 243 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS 243 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc
Confidence 3668877899999999999998875 888899988642 2455555677888887654
No 208
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=84.06 E-value=0.89 Score=42.20 Aligned_cols=35 Identities=31% Similarity=0.708 Sum_probs=28.3
Q ss_pred cCCCCCceEcccCCccEEEEE-eCCCcEEEEEEecc
Q 038392 341 DNFSTNKKLGEGGFGPVYKGT-LADGQEIVVKRFSK 375 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~-l~~g~~vaVK~l~~ 375 (397)
+.+.-.++||.|+||.+|.|. +.+|..||||.-..
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~ 50 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS 50 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecc
Confidence 345666799999999999995 56899999997544
No 209
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=83.90 E-value=1.3 Score=41.01 Aligned_cols=54 Identities=17% Similarity=-0.010 Sum_probs=37.9
Q ss_pred hcCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccH---H------HHHHHHHHhhcC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGL---K------ELKNDYFPNYNT 394 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~---~------ef~~Ev~~l~~l 394 (397)
.+.|...+++++|+||.||...- ++..+|||.+........ + .|.+|++.+.++
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL 92 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV 92 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH
Confidence 46677788999999999998544 577899999964221111 1 257887776654
No 210
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=83.60 E-value=1.2 Score=48.21 Aligned_cols=63 Identities=25% Similarity=0.410 Sum_probs=46.6
Q ss_pred EeHHHHHHHhcCCCCCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 331 FELATIAIATDNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 331 ~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
..++.+.+.+.-|.....||.|.+|.|||++- .+++.+|||++... ....+|-..|-.+|..+
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~ 72 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKY 72 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhc
Confidence 34555667777888888999999999999965 56899999998764 33445556676666543
No 211
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=82.89 E-value=1.2 Score=47.16 Aligned_cols=49 Identities=20% Similarity=0.371 Sum_probs=36.9
Q ss_pred ceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
-+||+|.+|+||.|+-.+ ...||||.+.....+..+-...|+.+++.+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr 630 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR 630 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh
Confidence 389999999999997554 5579999986545555566777777777654
No 212
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=82.70 E-value=0.49 Score=43.52 Aligned_cols=50 Identities=20% Similarity=0.449 Sum_probs=40.0
Q ss_pred CCCCceEcccCCccEEEEE-eCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 343 FSTNKKLGEGGFGPVYKGT-LADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~-l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+...+++|+|.+..||.|. +.+...++||.|... ..+..++|+.+|.+++
T Consensus 40 Yeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~ 90 (338)
T KOG0668|consen 40 YEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLR 90 (338)
T ss_pred HHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhcc
Confidence 3344689999999999995 567888999999653 3567889999998776
No 213
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=82.68 E-value=0.61 Score=30.68 Aligned_cols=32 Identities=31% Similarity=0.607 Sum_probs=25.0
Q ss_pred Cccccc-CCCCCceeeccC-CCCCccccCCcccC
Q 038392 238 DQCDSY-GLCGANGIFIIS-QSPICQCLEGFLTN 269 (397)
Q Consensus 238 ~~C~~~-~~CG~~giC~~~-~~~~C~C~~gf~~~ 269 (397)
|+|... ..|.+++.|... ++-.|.|++||...
T Consensus 3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~ 36 (42)
T PF07645_consen 3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYELN 36 (42)
T ss_dssp STTTTTSSSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence 567774 589999999753 56789999999843
No 214
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=82.16 E-value=1.3 Score=40.65 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=27.9
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEeccc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKI 376 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~ 376 (397)
|.....||+|+||.||++...++..+|+|++...
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~ 39 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG 39 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCC
Confidence 3344689999999999998877889999988643
No 215
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=82.11 E-value=1.2 Score=27.20 Aligned_cols=29 Identities=24% Similarity=0.589 Sum_probs=21.9
Q ss_pred ccccCCCCCceeeccC-CCCCccccCCccc
Q 038392 240 CDSYGLCGANGIFIIS-QSPICQCLEGFLT 268 (397)
Q Consensus 240 C~~~~~CG~~giC~~~-~~~~C~C~~gf~~ 268 (397)
|.....|..++.|... ....|.|++||..
T Consensus 2 C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g 31 (36)
T cd00053 2 CAASNPCSNGGTCVNTPGSYRCVCPPGYTG 31 (36)
T ss_pred CCCCCCCCCCCEEecCCCCeEeECCCCCcc
Confidence 4435678889999754 4678999999964
No 216
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=82.07 E-value=0.31 Score=50.82 Aligned_cols=47 Identities=26% Similarity=0.310 Sum_probs=36.8
Q ss_pred ceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhc
Q 038392 347 KKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYN 393 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~ 393 (397)
-.||.|+||.|||++-.+ +...|.|.+...+....+.|.-|+++|+.
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~ 85 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAE 85 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhc
Confidence 367899999999998776 44456787776666677889999998874
No 217
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=80.95 E-value=2.4 Score=43.99 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=41.7
Q ss_pred hcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 340 TDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 340 t~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
+..|.....||+|.|+.|..++... +..||+|.+++.. ....+.+..||++|..+.
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~ 113 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN 113 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC
Confidence 3445555789999999999997754 8999999987632 223455888999887653
No 218
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=79.91 E-value=1.5 Score=40.35 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=28.0
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEeccc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKI 376 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~ 376 (397)
|...+.||+|+||.||++....+..+|+|++...
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~ 39 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG 39 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccC
Confidence 4445789999999999999877778999988643
No 219
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=77.37 E-value=1.8 Score=39.80 Aligned_cols=31 Identities=29% Similarity=0.427 Sum_probs=26.3
Q ss_pred CceEcccCCccEEEEEeCCCcEEEEEEeccc
Q 038392 346 NKKLGEGGFGPVYKGTLADGQEIVVKRFSKI 376 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~ 376 (397)
...||+|+||.||++...++..+|||.+...
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~ 39 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEG 39 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCC
Confidence 4689999999999998877778999988653
No 220
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=77.32 E-value=3.4 Score=43.90 Aligned_cols=48 Identities=29% Similarity=0.318 Sum_probs=36.4
Q ss_pred ceEcccCCccEEEEEeCC--------CcEEEEEEeccccc-ccHHHHHHHHHHhhcC
Q 038392 347 KKLGEGGFGPVYKGTLAD--------GQEIVVKRFSKISE-QGLKELKNDYFPNYNT 394 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~--------g~~vaVK~l~~~~~-~~~~ef~~Ev~~l~~l 394 (397)
..||+|.||.|++|.+.. ...||||.+..... ...+.+..|+++|..+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~ 358 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKEL 358 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHh
Confidence 589999999999998631 45789999865332 3457789999888654
No 221
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=76.49 E-value=1.8 Score=47.95 Aligned_cols=33 Identities=33% Similarity=0.696 Sum_probs=28.7
Q ss_pred cCCCCCceEcccCCccEEEEEeCCCcEEEEEEe
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRF 373 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l 373 (397)
..|.....||+|++|+||+|+-.+++.||+|.=
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e 730 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVE 730 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCCCcEEEEEee
Confidence 445666789999999999999989999999975
No 222
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=76.22 E-value=2.5 Score=26.16 Aligned_cols=24 Identities=21% Similarity=0.650 Sum_probs=19.5
Q ss_pred CCCCCceeeccCCCCCccccCCccc
Q 038392 244 GLCGANGIFIISQSPICQCLEGFLT 268 (397)
Q Consensus 244 ~~CG~~giC~~~~~~~C~C~~gf~~ 268 (397)
..|...|.|... ...|.|.+||..
T Consensus 6 ~~C~~~G~C~~~-~g~C~C~~g~~G 29 (32)
T PF07974_consen 6 NICSGHGTCVSP-CGRCVCDSGYTG 29 (32)
T ss_pred CccCCCCEEeCC-CCEEECCCCCcC
Confidence 479999999743 578999999974
No 223
>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function. It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO
Probab=75.34 E-value=2.8 Score=28.83 Aligned_cols=34 Identities=24% Similarity=0.607 Sum_probs=28.4
Q ss_pred eccCCcccccCCCCCceeeccCCCCCccccCCcccCC
Q 038392 234 NLPKDQCDSYGLCGANGIFIISQSPICQCLEGFLTNS 270 (397)
Q Consensus 234 ~~p~~~C~~~~~CG~~giC~~~~~~~C~C~~gf~~~~ 270 (397)
..|.+.|....-|-.+++|. ...|.|++||....
T Consensus 16 ~~~g~~C~~~~qC~~~s~C~---~g~C~C~~g~~~~~ 49 (52)
T PF01683_consen 16 VQPGESCESDEQCIGGSVCV---NGRCQCPPGYVEVG 49 (52)
T ss_pred CCCCCCCCCcCCCCCcCEEc---CCEeECCCCCEecC
Confidence 45677899999999999995 57999999998654
No 224
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=75.20 E-value=1.3 Score=42.65 Aligned_cols=54 Identities=20% Similarity=0.290 Sum_probs=35.0
Q ss_pred CCCCCceEcccCCccEEEEEeCC-----CcEEEEEEeccccc--ccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD-----GQEIVVKRFSKISE--QGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~-----g~~vaVK~l~~~~~--~~~~ef~~Ev~~l~~l~ 395 (397)
.|+....||+|.+|.|||++-.+ ...+|+|++..... .-...-.+|+.++..|+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~ 85 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK 85 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc
Confidence 45555689999999999996543 23789998854211 11334566776665543
No 225
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=75.18 E-value=1.6 Score=44.79 Aligned_cols=37 Identities=30% Similarity=0.512 Sum_probs=30.7
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecc
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSK 375 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~ 375 (397)
..++|.-..+||+|+|.+||+++-. .+++.|||+|++
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K 108 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDK 108 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhH
Confidence 3456777789999999999999764 489999999965
No 226
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=74.27 E-value=2.6 Score=26.42 Aligned_cols=30 Identities=30% Similarity=0.661 Sum_probs=22.3
Q ss_pred CcccccCCCCCceeeccC-CCCCccccCCcc
Q 038392 238 DQCDSYGLCGANGIFIIS-QSPICQCLEGFL 267 (397)
Q Consensus 238 ~~C~~~~~CG~~giC~~~-~~~~C~C~~gf~ 267 (397)
+.|.....|...+.|... ....|.|++||.
T Consensus 3 ~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~ 33 (39)
T smart00179 3 DECASGNPCQNGGTCVNTVGSYRCECPPGYT 33 (39)
T ss_pred ccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence 457654578888899753 356799999997
No 227
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=71.76 E-value=4 Score=37.37 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=27.2
Q ss_pred CCCCCceEcccCCccEEEEEeCCCcEEEEEEeccc
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKI 376 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~ 376 (397)
+|...+.||+|+||.||++... +..+|+|.+...
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~ 40 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND 40 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC
Confidence 3455578999999999999875 677899988653
No 228
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=71.39 E-value=3.8 Score=39.16 Aligned_cols=54 Identities=22% Similarity=0.235 Sum_probs=38.9
Q ss_pred CCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccc---cccHHHHHHHHHHhhcCC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKIS---EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l~ 395 (397)
+|.....||.|+||.|...+.. +|...|+|.|++.. -.+.+.-.+|-.+|..++
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~ 102 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS 102 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc
Confidence 3444568999999999988875 58889999996521 123455677777777654
No 229
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=71.39 E-value=2.9 Score=40.67 Aligned_cols=32 Identities=31% Similarity=0.669 Sum_probs=26.6
Q ss_pred CCCCCceEcccCCccEEEEE-eCCCcEEEEEEe
Q 038392 342 NFSTNKKLGEGGFGPVYKGT-LADGQEIVVKRF 373 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~-l~~g~~vaVK~l 373 (397)
+|....+||+|.||..+.|+ |-+++.||||--
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE 61 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE 61 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEec
Confidence 45666899999999999994 668999999854
No 230
>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet. Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane
Probab=70.21 E-value=2.4 Score=26.48 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=14.0
Q ss_pred eeccCCCCCccccCCcccC
Q 038392 251 IFIISQSPICQCLEGFLTN 269 (397)
Q Consensus 251 iC~~~~~~~C~C~~gf~~~ 269 (397)
.|+.+...+|.||.||...
T Consensus 11 ~CDpn~~~~C~CPeGyIld 29 (34)
T PF09064_consen 11 DCDPNSPGQCFCPEGYILD 29 (34)
T ss_pred ccCCCCCCceeCCCceEec
Confidence 4555556789999999753
No 231
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=70.20 E-value=2.9 Score=38.24 Aligned_cols=32 Identities=34% Similarity=0.674 Sum_probs=26.2
Q ss_pred CCCCceEcccCCccEEEEEeCCCcEEEEEEecc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSK 375 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~ 375 (397)
|...+.||+|+||.||++.. .++.+|+|++..
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~ 39 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKC 39 (254)
T ss_pred ceeeeeeccCCCCceEeccc-CCCceEEEeecC
Confidence 44557899999999999975 577899998864
No 232
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=69.94 E-value=1.4 Score=21.48 Aligned_cols=11 Identities=36% Similarity=0.884 Sum_probs=7.6
Q ss_pred CccccCCcccC
Q 038392 259 ICQCLEGFLTN 269 (397)
Q Consensus 259 ~C~C~~gf~~~ 269 (397)
.|.|++||...
T Consensus 1 ~C~C~~G~~G~ 11 (13)
T PF12661_consen 1 TCQCPPGWTGP 11 (13)
T ss_dssp EEEE-TTEETT
T ss_pred CccCcCCCcCC
Confidence 48999999753
No 233
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=69.85 E-value=2.1 Score=46.15 Aligned_cols=47 Identities=28% Similarity=0.411 Sum_probs=31.9
Q ss_pred CCCCCceEcccCCcc-EEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhh
Q 038392 342 NFSTNKKLGEGGFGP-VYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNY 392 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~-Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~ 392 (397)
-|+..+++|.|..|+ ||+|.+. |++||||++-. ....--.+||+.|.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~ 557 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQ 557 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHH
Confidence 356667889998876 5999994 78999999843 11122246776654
No 234
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=69.79 E-value=10 Score=35.09 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=29.2
Q ss_pred HHHHHhcCCCCCceE--cccCCccEEEEEeC-CCcEEEEEEecc
Q 038392 335 TIAIATDNFSTNKKL--GEGGFGPVYKGTLA-DGQEIVVKRFSK 375 (397)
Q Consensus 335 ~l~~at~~f~~~~~l--g~G~fG~Vykg~l~-~g~~vaVK~l~~ 375 (397)
++..-.++|...+.+ |+|+||.||++... ++..+|+|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~ 51 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKA 51 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence 334444555554555 99999999999874 577888888754
No 235
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=68.81 E-value=4.3 Score=40.89 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=36.4
Q ss_pred CCCceEcccCCccEEEEEeC-CCcEEEEEEecc--cccccHHHHHHHHHHhhcCC
Q 038392 344 STNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSK--ISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 344 ~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~--~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.-.+.+|+|+||.++..... +...+++|++.. .+....+.-..|+.++++++
T Consensus 7 e~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~ 61 (426)
T KOG0589|consen 7 EVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL 61 (426)
T ss_pred hhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc
Confidence 33468999999999765443 466888888743 22333445678999999875
No 236
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=68.30 E-value=1.8 Score=45.07 Aligned_cols=49 Identities=24% Similarity=0.393 Sum_probs=35.3
Q ss_pred ceEcccCCccEEEEEeC-CCcEEE--EEEecccc--cccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIV--VKRFSKIS--EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~va--VK~l~~~~--~~~~~ef~~Ev~~l~~l~ 395 (397)
.+||+|.|-+||||.=. .|.+|| -+++.+.. ....+.|..||.+|+.|+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~ 99 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK 99 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC
Confidence 58999999999999754 377776 22333322 233578999999999875
No 237
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=67.73 E-value=2.7 Score=43.63 Aligned_cols=52 Identities=25% Similarity=0.348 Sum_probs=35.9
Q ss_pred eeEeHHHHHHHhcCCCCCceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 329 HCFELATIAIATDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 329 ~~~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
.-+.|++|.+ -+-||.|+-|.||.|.|. ++.|||||.....+ .|++.|.+|+
T Consensus 119 WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elkE-------TdIKHLRkLk 170 (904)
T KOG4721|consen 119 WEIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELKE-------TDIKHLRKLK 170 (904)
T ss_pred ccCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhhh-------hhHHHHHhcc
Confidence 3455666543 258999999999999996 57899998755322 3455555554
No 238
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=67.08 E-value=4.8 Score=24.75 Aligned_cols=31 Identities=29% Similarity=0.612 Sum_probs=21.9
Q ss_pred CcccccCCCCCceeeccC-CCCCccccCCccc
Q 038392 238 DQCDSYGLCGANGIFIIS-QSPICQCLEGFLT 268 (397)
Q Consensus 238 ~~C~~~~~CG~~giC~~~-~~~~C~C~~gf~~ 268 (397)
+.|.....|...+.|... ....|.|++||..
T Consensus 3 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g 34 (38)
T cd00054 3 DECASGNPCQNGGTCVNTVGSYRCSCPPGYTG 34 (38)
T ss_pred ccCCCCCCcCCCCEeECCCCCeEeECCCCCcC
Confidence 456553568888899753 3567999999864
No 239
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=66.21 E-value=2.7 Score=25.82 Aligned_cols=25 Identities=24% Similarity=0.519 Sum_probs=19.7
Q ss_pred CCCCCceeeccC--CCCCccccCCccc
Q 038392 244 GLCGANGIFIIS--QSPICQCLEGFLT 268 (397)
Q Consensus 244 ~~CG~~giC~~~--~~~~C~C~~gf~~ 268 (397)
..|...|.|... ....|.|++||..
T Consensus 4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G 30 (32)
T PF00008_consen 4 NPCQNGGTCIDLPGGGYTCECPPGYTG 30 (32)
T ss_dssp TSSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred CcCCCCeEEEeCCCCCEEeECCCCCcc
Confidence 478889999753 4568999999975
No 240
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=66.02 E-value=2 Score=47.79 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=40.3
Q ss_pred HHHHHhcCCCCCceEcccCCccEEEEEeCC-CcEEEEEEeccc---ccccHHHHHHHHHHh
Q 038392 335 TIAIATDNFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKI---SEQGLKELKNDYFPN 391 (397)
Q Consensus 335 ~l~~at~~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~---~~~~~~ef~~Ev~~l 391 (397)
++..-..+|....+||+|+||.|...++.. +++.|.|+|++. ......-|+.|-.+|
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDim 129 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIM 129 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHH
Confidence 344444677777899999999999998865 778899999762 233345566654444
No 241
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=65.97 E-value=4.7 Score=36.73 Aligned_cols=49 Identities=29% Similarity=0.289 Sum_probs=34.9
Q ss_pred CCceEcccCCccEEEEEe-CCCcEEEEEEeccc-ccccHHHHHHHHHHhhc
Q 038392 345 TNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKI-SEQGLKELKNDYFPNYN 393 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~-~~~~~~ef~~Ev~~l~~ 393 (397)
....||+|++|.|-|-++ .+|+.+|||++... ..+..+....|+.+..+
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r 100 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR 100 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc
Confidence 335799999999988766 57999999999542 33444556677765543
No 242
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=65.85 E-value=5.4 Score=39.80 Aligned_cols=48 Identities=27% Similarity=0.248 Sum_probs=35.2
Q ss_pred ceEcccCCccEEEEEeCC-CcEEEEEEecccc---cccHHHHHHHHHHhhcC
Q 038392 347 KKLGEGGFGPVYKGTLAD-GQEIVVKRFSKIS---EQGLKELKNDYFPNYNT 394 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~---~~~~~ef~~Ev~~l~~l 394 (397)
..||.|..|+||.+.+.+ +...|+|.+++.. ......-..|-++|+.+
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l 134 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL 134 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc
Confidence 479999999999999976 5889999997632 22233455666777654
No 243
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=63.53 E-value=0.63 Score=43.40 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=30.6
Q ss_pred ceEcccCCccEEEEEeCC-CcEEEEEEecc-ccccc-HHHHHHHHHHhhcC
Q 038392 347 KKLGEGGFGPVYKGTLAD-GQEIVVKRFSK-ISEQG-LKELKNDYFPNYNT 394 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~-~~~~~-~~ef~~Ev~~l~~l 394 (397)
++||+|.||.|||+...+ |+.||+|+.-- ....+ ...-..|+.+|..+
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l 73 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL 73 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh
Confidence 589999999999998765 67788876521 11111 12224566666543
No 244
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=62.62 E-value=4.4 Score=38.34 Aligned_cols=50 Identities=20% Similarity=0.351 Sum_probs=36.1
Q ss_pred CCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccc---cHHHHHHHHHHhhc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQ---GLKELKNDYFPNYN 393 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~---~~~ef~~Ev~~l~~ 393 (397)
..+.+-||-|.||.||..+-| +|+.||.||+-+. -+ ..+.+..|+++|.-
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcf 108 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSS 108 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHh
Confidence 455678999999999988775 6999999998542 12 23556667766553
No 245
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs
Probab=61.73 E-value=8.1 Score=28.00 Aligned_cols=23 Identities=35% Similarity=0.640 Sum_probs=18.2
Q ss_pred CCCCcceEEEeeccCCCCCCccc
Q 038392 288 YSRRDGFIKFSELKLPDSTSSWE 310 (397)
Q Consensus 288 C~~~~~f~~~~~~~~p~~~~~~~ 310 (397)
|...++|+++++|++|+....++
T Consensus 1 C~~~d~F~~l~~~~~p~~~~~~~ 23 (66)
T PF08276_consen 1 CGSGDGFLKLPNMKLPDFDNAIV 23 (66)
T ss_pred CcCCCEEEEECCeeCCCCcceee
Confidence 44468999999999999865543
No 246
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=61.33 E-value=5.1 Score=38.85 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=35.7
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccccccc---HHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQG---LKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~---~~ef~~Ev~~l~~l 394 (397)
++|.--.+||+|.||.|....-. .++..|+|+|.+-..-+ ...-..|-++|.+-
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~ 225 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC 225 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc
Confidence 44555568999999999887654 48899999986532222 22344566666543
No 247
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=60.32 E-value=8.9 Score=39.58 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=39.8
Q ss_pred eEeHHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 330 CFELATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 330 ~~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
++.+.|+.+. -|...--.|+|=|++|..|.-. -|+.||||++.+. +--.+.=..|+++|.+|.
T Consensus 423 rv~igE~LD~--RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~ 486 (752)
T KOG0670|consen 423 RVRIGELLDS--RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLN 486 (752)
T ss_pred EEehhhhhcc--eeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhh
Confidence 4455555432 1221224588989999988643 3789999999763 333344456888887763
No 248
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=59.85 E-value=3 Score=26.55 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=18.8
Q ss_pred cCCCCCceeeccC-CCCCccccCCcccC
Q 038392 243 YGLCGANGIFIIS-QSPICQCLEGFLTN 269 (397)
Q Consensus 243 ~~~CG~~giC~~~-~~~~C~C~~gf~~~ 269 (397)
.+-|.++..|... ..-.|.|.+||...
T Consensus 5 ~~~C~~nA~C~~~~~~~~C~C~~Gy~Gd 32 (36)
T PF12947_consen 5 NGGCHPNATCTNTGGSYTCTCKPGYEGD 32 (36)
T ss_dssp GGGS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred CCCCCCCcEeecCCCCEEeECCCCCccC
Confidence 3568889999764 46789999999754
No 249
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=59.58 E-value=3.6 Score=40.56 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=36.9
Q ss_pred CCCCCceEcccCCccEEEEEeCC-CcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
-|.....+|+|.||.|.+..-.. +..||||++.... .-.+.-+-|+++|.+|
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki 142 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKI 142 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 34444589999999999886533 7889999986643 3334456688888765
No 250
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=58.54 E-value=5.5 Score=22.94 Aligned_cols=11 Identities=27% Similarity=0.893 Sum_probs=9.3
Q ss_pred CccccCCcccC
Q 038392 259 ICQCLEGFLTN 269 (397)
Q Consensus 259 ~C~C~~gf~~~ 269 (397)
.|+|++||...
T Consensus 3 ~C~C~~Gy~l~ 13 (24)
T PF12662_consen 3 TCSCPPGYQLS 13 (24)
T ss_pred EeeCCCCCcCC
Confidence 69999999854
No 251
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=56.84 E-value=14 Score=37.84 Aligned_cols=50 Identities=14% Similarity=0.163 Sum_probs=37.9
Q ss_pred CCceEcccCCccEEEEEe-CCCcEEEEEEecccccccHHHHHHHHHHhhcCC
Q 038392 345 TNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 345 ~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l~ 395 (397)
..++||=|-|.+||.+.- .+.+.||+|+... ..+-.+.-..|+++|..++
T Consensus 82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~ 132 (590)
T KOG1290|consen 82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVR 132 (590)
T ss_pred EEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHH
Confidence 346899999999999853 4678999998743 3444566778999988765
No 252
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=55.02 E-value=21 Score=34.08 Aligned_cols=28 Identities=36% Similarity=0.628 Sum_probs=25.0
Q ss_pred eEcccCCccEEEEEeCC-CcEEEEEEecc
Q 038392 348 KLGEGGFGPVYKGTLAD-GQEIVVKRFSK 375 (397)
Q Consensus 348 ~lg~G~fG~Vykg~l~~-g~~vaVK~l~~ 375 (397)
.||.|.-|.|.|..+.. |..+|||.+.+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~r 127 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRR 127 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecc
Confidence 68999999999998865 88999999866
No 253
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=51.22 E-value=3.1 Score=41.89 Aligned_cols=28 Identities=39% Similarity=0.680 Sum_probs=23.5
Q ss_pred ceEcccCCccEEEE-EeCCCcEEEEEEec
Q 038392 347 KKLGEGGFGPVYKG-TLADGQEIVVKRFS 374 (397)
Q Consensus 347 ~~lg~G~fG~Vykg-~l~~g~~vaVK~l~ 374 (397)
++||+|||..|||+ -+...+.||||+-.
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHq 497 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQ 497 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeeh
Confidence 57899999999999 45668899999763
No 254
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=49.55 E-value=31 Score=36.09 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=29.4
Q ss_pred HhcCCCCCceEcccCCccEEEEEeCCCcEEEEEEecc
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLADGQEIVVKRFSK 375 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~ 375 (397)
.-..|++ .-|+.-+.|.||+++|++|+.||||.-+.
T Consensus 160 if~~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P 195 (538)
T KOG1235|consen 160 IFSEFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHP 195 (538)
T ss_pred HHHhcCc-chhhhcchhheEEEEecCCCEEEEEecCc
Confidence 3345654 57888999999999999999999998654
No 255
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=49.02 E-value=31 Score=30.99 Aligned_cols=51 Identities=24% Similarity=0.419 Sum_probs=31.1
Q ss_pred CCcEEEEcC-CCCEEEecCCCCCCCCcEE---------eeeecCCCEEEEeccCCCCCcccccc
Q 038392 46 TGNLVLTSQ-NKSVVWSANLSKEVRTPVV---------LQLLDSGNLVLRGERDGGSETYLWQS 99 (397)
Q Consensus 46 ~G~LvL~d~-~g~~vWss~~~~~~~~~~a---------~~LldsGNlVL~~~~~~~~~~~~WqS 99 (397)
+|.|..+|. +|..+|+.+.........+ .....+|+|+.+|.. +++++|+-
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~---tG~~~W~~ 62 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAK---TGKVLWRF 62 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETT---TSEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECC---CCCEEEEe
Confidence 688988897 8999999864211112221 012366667777752 46778864
No 256
>smart00181 EGF Epidermal growth factor-like domain.
Probab=47.12 E-value=17 Score=22.14 Aligned_cols=24 Identities=29% Similarity=0.623 Sum_probs=17.9
Q ss_pred CCCCCceeeccC-CCCCccccCCccc
Q 038392 244 GLCGANGIFIIS-QSPICQCLEGFLT 268 (397)
Q Consensus 244 ~~CG~~giC~~~-~~~~C~C~~gf~~ 268 (397)
..|... .|... ....|.|++||..
T Consensus 6 ~~C~~~-~C~~~~~~~~C~C~~g~~g 30 (35)
T smart00181 6 GPCSNG-TCINTPGSYTCSCPPGYTG 30 (35)
T ss_pred CCCCCC-EEECCCCCeEeECCCCCcc
Confidence 457766 88654 4678999999974
No 257
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=46.05 E-value=10 Score=43.25 Aligned_cols=56 Identities=20% Similarity=0.269 Sum_probs=38.7
Q ss_pred HhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecc--cccccHHHHHHHHHHhhcC
Q 038392 339 ATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSK--ISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 339 at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~--~~~~~~~ef~~Ev~~l~~l 394 (397)
.+-.+.-.+.||.|.||.||-++-. .|...|||-+.. ......+....|+.+|..|
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l 1291 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL 1291 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc
Confidence 3445556789999999999998654 588889987643 2233445666777776544
No 258
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=45.84 E-value=34 Score=30.56 Aligned_cols=45 Identities=20% Similarity=0.209 Sum_probs=32.2
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEecccccccHHHHHHHHHHhhcC
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRFSKISEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~~~~~~~ef~~Ev~~l~~l 394 (397)
..|++|.++.||.|...+ ..+|+|.=.. +.....+..|+++|-.+
T Consensus 28 ~~L~KG~~s~Vyl~~~~~-~~~a~Kvrr~--ds~r~~l~kEakiLeil 72 (201)
T COG2112 28 KELAKGTTSVVYLGEWRG-GEVALKVRRR--DSPRRNLEKEAKILEIL 72 (201)
T ss_pred hhhhcccccEEEEeeccC-ceEEEEEecC--CcchhhHHHHHHHHHHh
Confidence 478999999999999864 4778776543 23345677787776543
No 259
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=45.25 E-value=28 Score=28.07 Aligned_cols=30 Identities=27% Similarity=0.127 Sum_probs=24.8
Q ss_pred CceEcccCCccEEEEEeCCCcEEEEEEeccc
Q 038392 346 NKKLGEGGFGPVYKGTLADGQEIVVKRFSKI 376 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~~g~~vaVK~l~~~ 376 (397)
.+.|++|.++.||++...+ ..++||.....
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~ 32 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSR 32 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCC
Confidence 3579999999999999865 77899988654
No 260
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=44.67 E-value=43 Score=32.05 Aligned_cols=48 Identities=29% Similarity=0.444 Sum_probs=35.2
Q ss_pred CceEcccCCccEEEEEeCC-CcEEEEEEeccc---ccccHHHHHHHHHHhhc
Q 038392 346 NKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKI---SEQGLKELKNDYFPNYN 393 (397)
Q Consensus 346 ~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~~ 393 (397)
...||.|+++.||.++-.. ++..|||..... .....++++.|......
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~ 68 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITL 68 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGG
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhh
Confidence 3689999999999999876 899999987432 23346777777644433
No 261
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=43.64 E-value=11 Score=37.81 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=26.7
Q ss_pred CCCCCceEcccCCccEEEEEeCC-CcEEEEEEeccc
Q 038392 342 NFSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSKI 376 (397)
Q Consensus 342 ~f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~~ 376 (397)
+|.-..+||+|+||.|..+.-.. ....|||+|.+.
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKD 385 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKD 385 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccc
Confidence 35555799999999999886554 567899988653
No 262
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=39.64 E-value=48 Score=30.54 Aligned_cols=48 Identities=13% Similarity=0.124 Sum_probs=33.1
Q ss_pred ceEc-ccCCccEEEEEeCCCcEEEEEEeccc------c-------cccHHHHHHHHHHhhcCC
Q 038392 347 KKLG-EGGFGPVYKGTLADGQEIVVKRFSKI------S-------EQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg-~G~fG~Vykg~l~~g~~vaVK~l~~~------~-------~~~~~ef~~Ev~~l~~l~ 395 (397)
.+|| .|+.|+||+.... +..++||+.... . ......+..|++++.+++
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~ 98 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY 98 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH
Confidence 5788 8999999999886 667888877431 0 112245677888777654
No 263
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=38.87 E-value=45 Score=31.84 Aligned_cols=55 Identities=22% Similarity=0.480 Sum_probs=37.0
Q ss_pred cceeEeHHHHHHHhcCCCCCceEcccCCccEEEEEeC-CCcEEEEEEecccccccHHHHHHHH
Q 038392 327 SYHCFELATIAIATDNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISEQGLKELKNDY 388 (397)
Q Consensus 327 ~~~~~s~~~l~~at~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~~~~~ef~~Ev 388 (397)
+++.+++.+. |.....||+|.||.+..+..+ ..+.+++|-... .....++|..|.
T Consensus 16 el~kv~l~d~------y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rEf 71 (378)
T KOG1345|consen 16 ELKKVDLEDV------YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVREF 71 (378)
T ss_pred cccccchhhh------hhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHHh
Confidence 3444555543 333358999999999998875 477888887654 233457787774
No 264
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=38.14 E-value=36 Score=30.90 Aligned_cols=55 Identities=20% Similarity=0.173 Sum_probs=38.7
Q ss_pred cCCCCCceEcccCC-ccEEEEEeCCCcEEEEEEeccc-----------cc----------ccHHHHHHHHHHhhcCCC
Q 038392 341 DNFSTNKKLGEGGF-GPVYKGTLADGQEIVVKRFSKI-----------SE----------QGLKELKNDYFPNYNTKI 396 (397)
Q Consensus 341 ~~f~~~~~lg~G~f-G~Vykg~l~~g~~vaVK~l~~~-----------~~----------~~~~ef~~Ev~~l~~l~~ 396 (397)
.++.-.+.||.|.- |.|+|..+. |+..|+|..... .. ....-|..|++..++|+-
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 45555578999999 999999995 679999982110 00 112358899999888763
No 265
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=34.00 E-value=25 Score=36.42 Aligned_cols=48 Identities=23% Similarity=0.216 Sum_probs=33.7
Q ss_pred ceEcccCCccEEEEEeC-CCcEEEEEEeccc--ccccHHHHHHHHHHhhcC
Q 038392 347 KKLGEGGFGPVYKGTLA-DGQEIVVKRFSKI--SEQGLKELKNDYFPNYNT 394 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~--~~~~~~ef~~Ev~~l~~l 394 (397)
..||+|-|..|-.+..- .|..||||.+++. +.........||+-|.-+
T Consensus 24 kTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV 74 (864)
T KOG4717|consen 24 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV 74 (864)
T ss_pred hhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh
Confidence 57899999988665432 4889999999652 333445667788776544
No 266
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=33.07 E-value=45 Score=19.52 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=12.6
Q ss_pred cCCCCcEEEEcCCCCEEE
Q 038392 43 AIPTGNLVLTSQNKSVVW 60 (397)
Q Consensus 43 l~~~G~LvL~d~~g~~vW 60 (397)
++.+|+|++.|.+..-||
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 456788888887665555
No 267
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]
Probab=30.63 E-value=24 Score=40.71 Aligned_cols=40 Identities=28% Similarity=0.515 Sum_probs=27.8
Q ss_pred cCCCCCceeecc-CCCCCccccCCcccCCCCCCCCCCCeEe
Q 038392 243 YGLCGANGIFII-SQSPICQCLEGFLTNSGRFVDWSQGCVR 282 (397)
Q Consensus 243 ~~~CG~~giC~~-~~~~~C~C~~gf~~~~~~~~~~~~GC~r 282 (397)
.+.||++|-|.. .+.-+|.|.|||....-...-..+-|++
T Consensus 1244 s~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvp 1284 (2531)
T KOG4289|consen 1244 SGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVP 1284 (2531)
T ss_pred cCCCCCCCceEEecCceeEEecCCccccceeeecccCcccc
Confidence 588999999975 4567899999998654322223444544
No 268
>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=29.23 E-value=40 Score=36.67 Aligned_cols=32 Identities=22% Similarity=0.541 Sum_probs=25.6
Q ss_pred CcccccCCCCCceeeccC-CCCCccccCCcccCC
Q 038392 238 DQCDSYGLCGANGIFIIS-QSPICQCLEGFLTNS 270 (397)
Q Consensus 238 ~~C~~~~~CG~~giC~~~-~~~~C~C~~gf~~~~ 270 (397)
|+|. +..|-++..|-.+ ++-.|+|.+||....
T Consensus 828 DeC~-psrChp~A~CyntpgsfsC~C~pGy~GDG 860 (1289)
T KOG1214|consen 828 DECS-PSRCHPAATCYNTPGSFSCRCQPGYYGDG 860 (1289)
T ss_pred cccC-ccccCCCceEecCCCcceeecccCccCCC
Confidence 6776 8899999999765 366899999997653
No 269
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein. MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.
Probab=27.90 E-value=18 Score=23.21 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=17.0
Q ss_pred CCCCCceeecc--CCCCCccccCCcccC
Q 038392 244 GLCGANGIFII--SQSPICQCLEGFLTN 269 (397)
Q Consensus 244 ~~CG~~giC~~--~~~~~C~C~~gf~~~ 269 (397)
..|-.|+-|-. +....|.|+.||...
T Consensus 5 ~~cP~NA~C~~~~dG~eecrCllgyk~~ 32 (37)
T PF12946_consen 5 TKCPANAGCFRYDDGSEECRCLLGYKKV 32 (37)
T ss_dssp S---TTEEEEEETTSEEEEEE-TTEEEE
T ss_pred ccCCCCcccEEcCCCCEEEEeeCCcccc
Confidence 45777888854 357889999999864
No 270
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=27.89 E-value=74 Score=18.77 Aligned_cols=18 Identities=17% Similarity=0.481 Sum_probs=10.9
Q ss_pred CCCcEEEEcC-CCCEEEec
Q 038392 45 PTGNLVLTSQ-NKSVVWSA 62 (397)
Q Consensus 45 ~~G~LvL~d~-~g~~vWss 62 (397)
.+|.|+-.|. +|.++|..
T Consensus 14 ~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 14 TDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CCCEEEEEEcccCcEEEEc
Confidence 4566666665 56677753
No 271
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=27.48 E-value=2.7 Score=39.21 Aligned_cols=49 Identities=20% Similarity=0.337 Sum_probs=35.7
Q ss_pred ceEcccCCccEEEEEe-CCCcEEEEEEecc--cccccHHHHHHHHHHhhcCC
Q 038392 347 KKLGEGGFGPVYKGTL-ADGQEIVVKRFSK--ISEQGLKELKNDYFPNYNTK 395 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~--~~~~~~~ef~~Ev~~l~~l~ 395 (397)
+.||+|.|..||+..- +.|+.+|+|+++. .+..+.++...|+++-..||
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq 68 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 68 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC
Confidence 5899999999998744 5688888877642 23446778888887766554
No 272
>COG4393 Predicted membrane protein [Function unknown]
Probab=27.17 E-value=53 Score=31.88 Aligned_cols=39 Identities=31% Similarity=0.795 Sum_probs=25.1
Q ss_pred CCcccccCCCCCceeeccCCCCCcc-c-cCCcccCCCCCCCCCCCeEe
Q 038392 237 KDQCDSYGLCGANGIFIISQSPICQ-C-LEGFLTNSGRFVDWSQGCVR 282 (397)
Q Consensus 237 ~~~C~~~~~CG~~giC~~~~~~~C~-C-~~gf~~~~~~~~~~~~GC~r 282 (397)
-|.|+ .||.-||-..++...|. | ..-|.|. -...+||.|
T Consensus 334 fDAC~---iCGd~GYv~e~dqvICv~C~VrmfipS----IGk~GGCNP 374 (405)
T COG4393 334 FDACD---ICGDQGYVMEGDQVICVRCDVRMFIPS----IGKKGGCNP 374 (405)
T ss_pred ehHHH---hccccceEeECCEEEEEEccEEEEccc----CCCCCCCCC
Confidence 36675 59999998766666675 6 2244443 346788865
No 273
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=27.05 E-value=48 Score=35.37 Aligned_cols=52 Identities=21% Similarity=0.214 Sum_probs=35.9
Q ss_pred cCCCCCceEcccCCccEEEEEe-CCCcEEEEEEeccc---ccccHHHHHHHHHHhh
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTL-ADGQEIVVKRFSKI---SEQGLKELKNDYFPNY 392 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l-~~g~~vaVK~l~~~---~~~~~~ef~~Ev~~l~ 392 (397)
..|+-...||.|+-|.|-.|+. ..|+.+|||++.+. ..........|+.+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMk 67 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMK 67 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHH
Confidence 3455567899999999998866 45999999998553 2222333456666664
No 274
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=26.90 E-value=64 Score=30.86 Aligned_cols=27 Identities=30% Similarity=0.422 Sum_probs=25.0
Q ss_pred ceEcccCCccEEEEEeCCCcEEEEEEe
Q 038392 347 KKLGEGGFGPVYKGTLADGQEIVVKRF 373 (397)
Q Consensus 347 ~~lg~G~fG~Vykg~l~~g~~vaVK~l 373 (397)
+.||.|.=+.||.|..+.|..+|||--
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfH 123 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFH 123 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEe
Confidence 689999999999999999999999854
No 275
>PHA02887 EGF-like protein; Provisional
Probab=26.48 E-value=34 Score=27.87 Aligned_cols=32 Identities=22% Similarity=0.549 Sum_probs=23.6
Q ss_pred cCCcccc--cCCCCCceeeccC---CCCCccccCCccc
Q 038392 236 PKDQCDS--YGLCGANGIFIIS---QSPICQCLEGFLT 268 (397)
Q Consensus 236 p~~~C~~--~~~CG~~giC~~~---~~~~C~C~~gf~~ 268 (397)
-.++|.- -++|= +|.|.+- ..+.|.|.+||..
T Consensus 82 hf~pC~~eyk~YCi-HG~C~yI~dL~epsCrC~~GYtG 118 (126)
T PHA02887 82 FFEKCKNDFNDFCI-NGECMNIIDLDEKFCICNKGYTG 118 (126)
T ss_pred CccccChHhhCEee-CCEEEccccCCCceeECCCCccc
Confidence 3457754 57787 7999763 4689999999974
No 276
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=25.66 E-value=39 Score=32.27 Aligned_cols=54 Identities=17% Similarity=0.205 Sum_probs=36.6
Q ss_pred cCCCCCceEcccCCccEEEEEeC-CCcEEEEEEeccccc--cc------HHHHHHHHHHhhcC
Q 038392 341 DNFSTNKKLGEGGFGPVYKGTLA-DGQEIVVKRFSKISE--QG------LKELKNDYFPNYNT 394 (397)
Q Consensus 341 ~~f~~~~~lg~G~fG~Vykg~l~-~g~~vaVK~l~~~~~--~~------~~ef~~Ev~~l~~l 394 (397)
+.+.+..+||+|....|-+.+.. .++..|+|++..... ++ .++-..|+.+|.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv 79 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQV 79 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHh
Confidence 34566789999999988887764 488999999854321 11 24456677776543
No 277
>PF10080 DUF2318: Predicted membrane protein (DUF2318); InterPro: IPR018758 This domain of unknown function is found in hypothetical bacterial membrane proteins with no known function.
Probab=25.42 E-value=1.7e+02 Score=23.31 Aligned_cols=41 Identities=27% Similarity=0.631 Sum_probs=25.4
Q ss_pred CcccccCCCCCceeeccCCCCCcc-ccCCcccCCCCCCCCCCCeEeC
Q 038392 238 DQCDSYGLCGANGIFIISQSPICQ-CLEGFLTNSGRFVDWSQGCVRN 283 (397)
Q Consensus 238 ~~C~~~~~CG~~giC~~~~~~~C~-C~~gf~~~~~~~~~~~~GC~r~ 283 (397)
|.|+ +||+-|+=.......|. |-.-|...+ .+...+||-|.
T Consensus 36 daCe---iC~~~GY~q~g~~lvC~~C~~~~~~~~--ig~~~GGCNP~ 77 (102)
T PF10080_consen 36 DACE---ICGPKGYYQEGDQLVCKNCGVRFNLPT--IGGKSGGCNPI 77 (102)
T ss_pred Eecc---ccCCCceEEECCEEEEecCCCEEehhh--cccccCCCCcc
Confidence 4565 47887776555556676 765555433 24578899664
No 278
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium. Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.
Probab=25.14 E-value=45 Score=29.64 Aligned_cols=35 Identities=29% Similarity=0.618 Sum_probs=24.7
Q ss_pred cCCCCCceeeccCC------CCCccccCCcccCCCCCCCCCCCeEeCC
Q 038392 243 YGLCGANGIFIISQ------SPICQCLEGFLTNSGRFVDWSQGCVRNK 284 (397)
Q Consensus 243 ~~~CG~~giC~~~~------~~~C~C~~gf~~~~~~~~~~~~GC~r~~ 284 (397)
.-.||.|+.|.... .-.|.|.+||.... .-|++..
T Consensus 49 ~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~-------~vCvp~~ 89 (197)
T PF06247_consen 49 NKPCGDYAKCINQANKGEERAYKCDCINGYILKQ-------GVCVPNK 89 (197)
T ss_dssp TSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESS-------SSEEEGG
T ss_pred CccccchhhhhcCCCcccceeEEEecccCceeeC-------CeEchhh
Confidence 57899999997543 23599999998653 4677654
No 279
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=25.03 E-value=63 Score=34.05 Aligned_cols=33 Identities=33% Similarity=0.550 Sum_probs=25.7
Q ss_pred CCCCceEcccCCccEEEEEeCC-CcEEEEEEecc
Q 038392 343 FSTNKKLGEGGFGPVYKGTLAD-GQEIVVKRFSK 375 (397)
Q Consensus 343 f~~~~~lg~G~fG~Vykg~l~~-g~~vaVK~l~~ 375 (397)
|.....||+|+||.|..++... ..+|+||.+.+
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~K 596 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFK 596 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhh
Confidence 5555689999999999998864 56788887643
No 280
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=24.88 E-value=99 Score=19.36 Aligned_cols=23 Identities=22% Similarity=0.419 Sum_probs=17.6
Q ss_pred CCCCcEEEEcC-CCCEEEecCCCC
Q 038392 44 IPTGNLVLTSQ-NKSVVWSANLSK 66 (397)
Q Consensus 44 ~~~G~LvL~d~-~g~~vWss~~~~ 66 (397)
+.+|.|+-+|. .|.++|.-++..
T Consensus 7 ~~~g~l~AlD~~TG~~~W~~~~~~ 30 (38)
T PF01011_consen 7 TPDGYLYALDAKTGKVLWKFQTGP 30 (38)
T ss_dssp TTTSEEEEEETTTTSEEEEEESSS
T ss_pred CCCCEEEEEECCCCCEEEeeeCCC
Confidence 45788888885 588999887654
No 281
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=24.65 E-value=89 Score=27.90 Aligned_cols=53 Identities=21% Similarity=0.308 Sum_probs=32.8
Q ss_pred CCCCcEEEEcC-CCCEEEecCCCCCCCCc------EEeeeecCCCEEEEeccCCCCCcccccc
Q 038392 44 IPTGNLVLTSQ-NKSVVWSANLSKEVRTP------VVLQLLDSGNLVLRGERDGGSETYLWQS 99 (397)
Q Consensus 44 ~~~G~LvL~d~-~g~~vWss~~~~~~~~~------~a~~LldsGNlVL~~~~~~~~~~~~WqS 99 (397)
+.+|.|+.+|. +|.++|+.........+ .......+|-|+.+|. .+++++|+.
T Consensus 43 ~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~---~tG~~~W~~ 102 (238)
T PF13360_consen 43 SGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDA---KTGKVLWSI 102 (238)
T ss_dssp ETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEET---TTSCEEEEE
T ss_pred cCCCEEEEEECCCCCEEEEeeccccccceeeecccccccccceeeeEeccc---CCcceeeee
Confidence 46899999996 89999988754321111 1102223445666664 347899995
No 282
>PF11403 Yeast_MT: Yeast metallothionein; InterPro: IPR022710 Metallothioneins are characterised by an abundance of cysteine residues and a lack of generic secondary structure motifs. This protein functions in primary metal storage, transport and detoxification []. For the first 40 residues in the protein the polypeptide wraps around the metal by forming two large parallel loops separated by a deep cleft containing the metal cluster []. ; PDB: 1AQS_A 1AQR_A 1RJU_V 1FMY_A 1AOO_A 1AQQ_A.
Probab=24.05 E-value=59 Score=20.18 Aligned_cols=20 Identities=30% Similarity=0.605 Sum_probs=10.2
Q ss_pred CCCCCceeeccCCCCCccccCCcc
Q 038392 244 GLCGANGIFIISQSPICQCLEGFL 267 (397)
Q Consensus 244 ~~CG~~giC~~~~~~~C~C~~gf~ 267 (397)
+.|-.+--| ...|+||.|-.
T Consensus 12 gscknneqc----qkscscptgcn 31 (40)
T PF11403_consen 12 GSCKNNEQC----QKSCSCPTGCN 31 (40)
T ss_dssp STTTT-TTS----TTS-SS-TTTT
T ss_pred CCccChHHH----hhcCCCCCCCC
Confidence 445445445 46799987664
No 283
>PF10681 Rot1: Chaperone for protein-folding within the ER, fungal; InterPro: IPR019623 This conserved fungal family is an essential molecular chaperone in the endoplasmic reticulum. Molecular chaperones transiently interact with unfolded proteins to inhibit their self-aggregation and to support their folding and/or assembly. Rot1 is a general chaperone with some substrate specificity, its substrates being the structurally unrelated Kre5 Kre6 Big1 Atg22, which are type I, type II, and polytopic membrane proteins. The dependencies of each for Rot1 do not share similarities. However, their folding does require BiP, and one of these proteins was simultaneously associated with both Rot1 and BiP. In addition, Rot1 may cooperate with BiP/Kar2 in the folding of Kre6 [].
Probab=23.08 E-value=3.6e+02 Score=24.43 Aligned_cols=112 Identities=17% Similarity=0.226 Sum_probs=59.6
Q ss_pred cCCCCCeEEEeecCCCCCCceEEeeCCCCCCCCCCCCC--cCCCCcEEE----EcCC--------CCEEEecCCCCCCCC
Q 038392 5 SQTRPVWKKSGFNSGSGERKWHPGLEPRRLNPDPDPDF--AIPTGNLVL----TSQN--------KSVVWSANLSKEVRT 70 (397)
Q Consensus 5 ~~~~~~~f~lGF~~~~~~~~~ylgi~~~r~~pv~~~s~--l~~~G~LvL----~d~~--------g~~vWss~~~~~~~~ 70 (397)
|+.+.|+..-|||.|-+.. |. .|-...-+ |++||---- ..++ +.++|.-+
T Consensus 7 SkS~~V~TGpgFydPv~~~-f~--------eP~~~GISYSFT~DG~~EeA~Yr~~~Np~~p~C~~a~l~wQHG------- 70 (212)
T PF10681_consen 7 SKSNTVFTGPGFYDPVDEL-FI--------EPSLPGISYSFTEDGYFEEAQYRVTSNPTNPSCPTAVLIWQHG------- 70 (212)
T ss_pred CCCCCeEeCCcccChhHhh-cc--------CCCCCceeEEEcCCCeeeEEEEEEccCCCCCCCCceEEEEecc-------
Confidence 4567788888999986432 21 12222222 777775311 1111 22344422
Q ss_pred cEEeeeecCCCEEEEeccCCCCCcccccccCCCCCCcCCCceeccccCCCceeEEEEccCCCCCCCccceeeec
Q 038392 71 PVVLQLLDSGNLVLRGERDGGSETYLWQSLDYPSDTLLPGMKLGWDLKTGLERRITSWKSSDDPSPGDFFWKIE 144 (397)
Q Consensus 71 ~~a~~LldsGNlVL~~~~~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~t~~~~~L~S~~s~~dps~G~f~l~~~ 144 (397)
.- +|.++|.|+|.-=. ..++ |-+--|...= -...-..+ +...+.+|.-..|+-.|.|.|+|-
T Consensus 71 -tY-~l~~nGsl~L~P~~--~DGr---Ql~sdPC~~~-~s~y~rYn----q~e~f~~~~v~~D~y~~~~~L~L~ 132 (212)
T PF10681_consen 71 -TY-ELNSNGSLTLTPFA--VDGR---QLVSDPCADD-SSTYTRYN----QTELFKSFDVYVDPYHGRYRLQLY 132 (212)
T ss_pred -eE-EECCCCcEEEeecC--CCCc---eeccCCCCCC-cccEEEEc----ceEEEEEEEEEEeCCCCeeEEEEE
Confidence 12 57789999998532 1244 3344455433 22222333 225567777777887888888774
No 284
>PRK10695 hypothetical protein; Provisional
Probab=22.98 E-value=2.6e+02 Score=30.99 Aligned_cols=64 Identities=27% Similarity=0.357 Sum_probs=46.0
Q ss_pred cCCCEEEEeccCCCCCcccccccCCCCCCcCCCceeccc-c--------------------CCCceeEEEEccCCCCCCC
Q 038392 78 DSGNLVLRGERDGGSETYLWQSLDYPSDTLLPGMKLGWD-L--------------------KTGLERRITSWKSSDDPSP 136 (397)
Q Consensus 78 dsGNlVL~~~~~~~~~~~~WqSFd~PTDTlLpgq~l~~~-~--------------------~t~~~~~L~S~~s~~dps~ 136 (397)
.-+++|++..- ...+=-||+.||=+|+||.-|+.- + ..|.+-||-+=....+|.=
T Consensus 334 k~~~~~l~a~l----p~~~~G~~~dP~l~f~pGaLlR~~G~~~~~l~i~e~R~PLAGv~v~~~Gv~GRLQAil~~~~~~~ 409 (859)
T PRK10695 334 KQGDLILYATL----PAQLSGSLLDPTLTFQPGALLRSWGRLIDTLTIDEARWPLAGVKVTRRGVDGRLQAILQAHEPYW 409 (859)
T ss_pred ccccEEEEEeC----CeeeccccCCCceEecCccceeecCCcCCceeeeeeecccCCcEEecccccceEEEEEEccCCcc
Confidence 44567777654 335567999999999999777642 1 1244566766667788889
Q ss_pred ccceeeecc
Q 038392 137 GDFFWKIER 145 (397)
Q Consensus 137 G~f~l~~~~ 145 (397)
|+|.|.+|-
T Consensus 410 g~f~LHLDG 418 (859)
T PRK10695 410 GDFNLHLDG 418 (859)
T ss_pred cCEEEeecC
Confidence 999999974
No 285
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=22.25 E-value=1.8e+02 Score=28.32 Aligned_cols=52 Identities=15% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCCCcEEEEc-CCCCEEEecCCCCCCC-CcE-----EeeeecCCCEEEEeccCCCCCccccc
Q 038392 44 IPTGNLVLTS-QNKSVVWSANLSKEVR-TPV-----VLQLLDSGNLVLRGERDGGSETYLWQ 98 (397)
Q Consensus 44 ~~~G~LvL~d-~~g~~vWss~~~~~~~-~~~-----a~~LldsGNlVL~~~~~~~~~~~~Wq 98 (397)
+.+|.|.-+| .+|.++|+.+...... .+. ...-..+|+|+-.|.. +++++|+
T Consensus 72 ~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~---tG~~~W~ 130 (377)
T TIGR03300 72 DADGTVVALDAETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAE---DGKELWR 130 (377)
T ss_pred CCCCeEEEEEccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECC---CCcEeee
Confidence 5568888888 5799999876543211 111 1012346777777753 4788996
No 286
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=20.86 E-value=1.5e+02 Score=29.36 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=0.0
Q ss_pred CCCCCCCCCC---cCCCCcEEEEc-CCCCEEEecCCCC------------------CCCCcEEeeeecCCCEEEEeccCC
Q 038392 33 RLNPDPDPDF---AIPTGNLVLTS-QNKSVVWSANLSK------------------EVRTPVVLQLLDSGNLVLRGERDG 90 (397)
Q Consensus 33 r~~pv~~~s~---l~~~G~LvL~d-~~g~~vWss~~~~------------------~~~~~~a~~LldsGNlVL~~~~~~ 90 (397)
|-.|+-.... .+.+|.|+=+| .+|.++|+.+... .....+. .-..+|+|+-.|..
T Consensus 62 ~~sPvv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~-v~~~~g~l~ald~~-- 138 (394)
T PRK11138 62 RLHPAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVY-IGSEKGQVYALNAE-- 138 (394)
T ss_pred eeccEEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEE-EEcCCCEEEEEECC--
Q ss_pred CCCccccc
Q 038392 91 GSETYLWQ 98 (397)
Q Consensus 91 ~~~~~~Wq 98 (397)
+++.+|+
T Consensus 139 -tG~~~W~ 145 (394)
T PRK11138 139 -DGEVAWQ 145 (394)
T ss_pred -CCCCccc
No 287
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=20.17 E-value=37 Score=21.53 Aligned_cols=15 Identities=27% Similarity=0.541 Sum_probs=10.3
Q ss_pred CCCCccccCCcccCC
Q 038392 256 QSPICQCLEGFLTNS 270 (397)
Q Consensus 256 ~~~~C~C~~gf~~~~ 270 (397)
....|+|++||....
T Consensus 17 g~~~C~C~~Gy~L~~ 31 (36)
T PF14670_consen 17 GSYRCSCPPGYKLAE 31 (36)
T ss_dssp TSEEEE-STTEEE-T
T ss_pred CceEeECCCCCEECc
Confidence 467899999998653
Done!